File(s) under embargo
Reason: Results generated from this study are included in a Manuscript which is under preparation and will be submitted soon.
Supporting data for "Deciphering the impacts of collagen type I and interleukin-6 in diffuse-type gastric cancer progression using CDH1-deficient human gastric organoid models"
6 data files are included in Dataset (Main folder). "Proliferation assay" file described cell count record and calculations of organoid proliferation rate assessed by the 7-day proliferation assay. "ROCK inhibitor withdrawal assay" file described cell titre glo record and calculations of organoid relative viability in ROCK inhibitor-withdrawn conditions. "Spheroid formation assay" file described cell count record and calculations of fold change in cell number assessed by the spheroid formation assay. "Gene expression levels" file described gene expression levels of samples by RNA-seq (in Log2TPM), in-house microarray data and TCGA data. "Whole-exome sequencing" file described copy number events of PC clones and their corresponding WT organoids. "Sanger sequencing of PC clones" described raw sequencing files of DNA of PC clones.