PeakID (cmd=annotatePeaks.pl ePOU_unique_nocontrol_MA_xls.bed mm10 -m MORE+1_VM_v2.0.mot MORE_VM_v2.0.mot soxoct_VM_2.mot -size -100,100)	Chr	Start	End	Strand	Peak Score	Focus Ratio/Region Size	Annotation	Detailed Annotation	Distance to TSS	Nearest PromoterID	Entrez ID	Nearest Unigene	Nearest Refseq	Nearest Ensembl	Gene Name	Gene Alias	Gene Description	Gene Type	CpG%	GC%	MORE+1_VM_v2 Distance From Peak(sequence,strand,conservation)	MORE_VM_v2 Distance From Peak(sequence,strand,conservation)	soxoct_Marson_VM_soxpartStringent Distance From Peak(sequence,strand,conservation)
ePOU_nocontrol_ChIP_peaks_unique-1362	chr17	47507939	47508139	+	4.33581	NA	intron (NM_001081635, intron 1 of 6)	intron (NM_001081635, intron 1 of 6)	2988	NM_001081635	12445	Mm.27291	NM_007632	ENSMUSG00000034165	Ccnd3	9230106B05Rik|AA682053|AL024085|AW146355|C78795	cyclin D3	protein-coding	0.020000	0.542289	-28(TATGAATAATGCAAA,+,0.00),-28(TATGAATAATGCAAA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2356	chr5	137349820	137350020	+	3.88289	NA	promoter-TSS (NM_010144)	promoter-TSS (NM_010144)	-189	NM_010144	13846	Mm.34533	NM_010144	ENSMUSG00000029710	Ephb4	AI042935|Htk|MDK2|Myk1|Tyro11|b2b2412Clo	Eph receptor B4	protein-coding	0.030000	0.611940	21(CATGAATTATTCAGC,+,0.00),21(CATGAATTATTCAGC,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-934	chr14	23397808	23398008	+	3.88289	NA	intron (NM_001253368, intron 19 of 28)	intron (NM_001253368, intron 19 of 28)	-303337	NR_033550	791307	Mm.364384	NR_033550	ENSMUSG00000068680	Gm10248	-	predicted gene 10248	ncRNA	0.005000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-247	chr10	8038634	8038834	+	3.69026	NA	Intergenic	Intergenic	-82611	NM_138667	68652	Mm.193041	NM_138667	ENSMUSG00000015755	Tab2	1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733	TGF-beta activated kinase 1/MAP3K7 binding protein 2	protein-coding	0.020000	0.402985	-9(AATGAATAATTCGTA,+,0.00),-9(AATGAATAATTCGTA,-,0.00),31(GATGCATAATTCAAA,+,0.00),31(GATGCATAATTCAAA,-,0.00)		6(CATTTGTAATTCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1597	chr19	50244375	50244575	+	3.58251	NA	intron (NM_001360457, intron 9 of 26)	intron (NM_001360457, intron 9 of 26)	434171	NM_001360457	58178	Mm.313672	NM_021377	ENSMUSG00000043531	Sorcs1	Sorcs|mSorCS	sortilin-related VPS10 domain containing receptor 1	protein-coding	0.005000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-11	chr1	12991594	12991794	+	3.58251	NA	promoter-TSS (NM_172841)	promoter-TSS (NM_172841)	-559	NM_172841	240726	Mm.24481	NM_172841	ENSMUSG00000025938	Slco5a1	4732454B15|A630033C23Rik|AA407151	solute carrier organic anion transporter family, member 5A1	protein-coding	0.060000	0.507463			14(AATTTGCTTTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-883	chr13	95818899	95819099	+	3.58251	NA	intron (NM_027711, intron 2 of 35)	Lx9|LINE|L1	72923	NM_027711	544963	Mm.38878	NM_027711	ENSMUSG00000021676	Iqgap2	4933417J23Rik|A630053O10|AI788777	IQ motif containing GTPase activating protein 2	protein-coding	0.005000	0.388060		21(TATGCATATACATG,+,0.00),21(TATGCATATACATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1459	chr18	47852506	47852706	+	3.58251	NA	Intergenic	Intergenic	-63073	NR_152200	100042982	Mm.125235	NR_152200		Gm4146	Gm45939	predicted gene 4146	ncRNA	0.005000	0.368159	-18(CATGAATAATGCAGA,+,0.00),-18(CATGAATAATGCAGA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1024	chr14	99944216	99944416	+	3.58251	NA	intron (NM_010636, intron 4 of 6)	intron (NM_010636, intron 4 of 6)	205480	NM_010636	16597	Mm.396499	NM_010636	ENSMUSG00000072294	Klf12	2700063E05Rik|AI225908|AI315654|AP-2rep|B130052C06Rik|D530033K05Rik	Kruppel-like factor 12	protein-coding	0.010000	0.497512	-13(CATGCATTATTCATG,+,0.00),-13(CATGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-876	chr13	93302635	93302835	+	3.46539	NA	Intergenic	Intergenic	-1022	NM_011982	26556	Mm.37533	NM_011982	ENSMUSG00000007617	Homer1	PSD-Zip45|SYN47|Ves-1|homer-1|vesl-1	homer scaffolding protein 1	protein-coding	0.000000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-2053	chr4	12334645	12334845	+	3.46539	NA	Intergenic	Intergenic	-162730	NM_026558	68099	Mm.25340	NM_026558	ENSMUSG00000028218	Fam92a	6720467C03Rik|Fam92a1	family with sequence similarity 92, member A	protein-coding	0.015000	0.417910	-16(TATGCATTATTCATG,+,0.00),-16(TATGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-675	chr12	37285353	37285553	+	3.46539	NA	intron (NM_178767, intron 3 of 12)	intron (NM_178767, intron 3 of 12)	43814	NM_178767	319660	Mm.485540	NM_178767	ENSMUSG00000050103	Agmo	A530016O06Rik|AI790538|Tmem195	alkylglycerol monooxygenase	protein-coding	0.000000	0.393035			20(ATTAGCAAATGAATAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2064	chr4	22427806	22428006	+	3.46539	NA	intron (NM_172988, intron 8 of 8)	Lx8b|LINE|L1	60460	NM_008899	18992	Mm.129387	NM_008899	ENSMUSG00000095139	Pou3f2	9430075J19Rik|A230098E07Rik|Brn-2|Brn2|OTF-7|Otf7|oct-7	POU domain, class 3, transcription factor 2	protein-coding	0.000000	0.343284		-5(TATGCATTTTCATG,+,0.00),-5(TATGCATTTTCATG,-,0.00)	-2(GCATTTTCATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2980	chrX	51703571	51703771	+	3.46539	NA	Intergenic	MTE2a|LTR|ERVL-MaLR	-22069	NM_001290467	50786	Mm.252561	NM_015819	ENSMUSG00000062184	Hs6st2	6OST2	heparan sulfate 6-O-sulfotransferase 2	protein-coding	0.020000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-2607	chr7	75781912	75782112	+	3.46539	NA	Intergenic	CpG	-66326	NM_001122780	207952	Mm.206223	NM_029652	ENSMUSG00000055652	Klhl25	2810402K13Rik|BC027373|Enc-1	kelch-like 25	protein-coding	0.115000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-2410	chr6	34154391	34154591	+	3.44861	NA	Intergenic	Intergenic	22563	NM_021435	58246	Mm.245527	NM_021435	ENSMUSG00000018999	Slc35b4	4930474D06Rik|AB041549|AW494345	solute carrier family 35, member B4	protein-coding	0.010000	0.437811	-18(AATGAATTATGCATG,+,0.00),-18(AATGAATTATGCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2808	chr8	118524061	118524261	+	3.33709	NA	intron (NM_019707, intron 2 of 13)	intron (NM_019707, intron 2 of 13)	240550	NM_019707	12554	Mm.334841	NM_019707	ENSMUSG00000031841	Cdh13	4932416G01Rik|Cdht|Tcad	cadherin 13	protein-coding	0.000000	0.407960			0(ATTTGAATGGGAGAAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1445	chr18	34065407	34065607	+	3.33709	NA	Intergenic	L1M5|LINE|L1	-58301	NM_013512	13824	Mm.3465	NM_013512	ENSMUSG00000024376	Epb41l4a	Epb4.1l4|Epb4.1l4a|NBL4	erythrocyte membrane protein band 4.1 like 4a	protein-coding	0.005000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-1607	chr19	57782105	57782305	+	3.33709	NA	intron (NM_181415, intron 25 of 28)	intron (NM_181415, intron 25 of 28)	171171	NM_181415	226255	Mm.245340	NM_181415	ENSMUSG00000054843	Atrnl1	AI504415|AW555641|Alp|Atrnl|Atrnlp	attractin like 1	protein-coding	0.005000	0.283582			13(TCTTTGTCATTTAAAT,+,0.00),72(CTATTGTTAAGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-501	chr11	62917509	62917709	+	3.33709	NA	Intergenic	Intergenic	-33584	NM_025496	66338	Mm.46166	NM_025496	ENSMUSG00000042200	Cdrt4	1700019I23Rik	CMT1A duplicated region transcript 4	protein-coding	0.010000	0.407960		-40(TATGCATATGCATA,+,0.00),-40(TATGCATATGCATA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-9	chr1	12710670	12710870	+	3.33709	NA	intron (NM_001198566, intron 1 of 20)	intron (NM_001198566, intron 1 of 20)	-7775	NM_172294	240725	Mm.45563	NM_172294	ENSMUSG00000016918	Sulf1	AI467640|AW121680|mKIAA1077	sulfatase 1	protein-coding	0.000000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-1621	chr2	6900269	6900469	+	3.33709	NA	intron (NM_001110230, intron 2 of 14)	L1ME4a|LINE|L1	-15373	NM_001160293	14007	Mm.398543	NM_010160	ENSMUSG00000002107	Celf2	B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3	CUGBP, Elav-like family member 2	protein-coding	0.000000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-2096	chr4	59799019	59799219	+	3.33709	NA	Intergenic	L1ME3A|LINE|L1	-6531	NM_172468	209131	Mm.259705	NM_172468	ENSMUSG00000028385	Snx30	4732481H14Rik|C030041J06Rik	sorting nexin family member 30	protein-coding	0.005000	0.308458			8(CCATTGTTATGGATAT,+,0.00),29(ATGTTATTATTCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-126	chr1	119837326	119837526	+	3.33709	NA	promoter-TSS (NM_019933)	promoter-TSS (NM_019933)	-355	NM_019933	19258	Mm.458796	NM_019933	ENSMUSG00000026384	Ptpn4	PTPMEG|Ptn4|TEP|TEP/mPTPMEG|hPTP-MEG	protein tyrosine phosphatase, non-receptor type 4	protein-coding	0.070000	0.661692			
ePOU_nocontrol_ChIP_peaks_unique-265	chr10	20182091	20182291	+	3.33709	NA	intron (NM_001358787, intron 1 of 17)	intron (NM_001358787, intron 1 of 17)	11169	NM_001358787	17761	Mm.20928	NM_008635	ENSMUSG00000019996	Map7	E-MAP-115|MAP-7|Mtap7|R75000|mshi|mste|ste	microtubule-associated protein 7	protein-coding	0.015000	0.447761	-46(CATGAATAATTAAAA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2042	chr3	156280780	156280980	+	3.33709	NA	Intergenic	Intergenic	280807	NR_040399	329782	Mm.183459	NR_040398	ENSMUSG00000085084	4930570G19Rik	C630015G22	RIKEN cDNA 4930570G19 gene	ncRNA	0.000000	0.363184	-39(AATACATTATGCAAG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1221	chr16	33130093	33130293	+	3.33709	NA	Intergenic	Intergenic	24832	NR_035469	100316698		NR_035469	ENSMUSG00000088860	Mir1947	mir-1947|mmu-mir-1947	microRNA 1947	ncRNA	0.020000	0.542289			
merged_common-118	chr17	30045352	30045552	+	3.19526	NA	intron (NR_151442, intron 1 of 3)	MER131|SINE?|SINE?	40413	NM_148926	21769	Mm.220972	NM_148926	ENSMUSG00000044477	Zfand3	AW539211|TEG-27|Tex27	zinc finger, AN1-type domain 3	protein-coding	0.005000	0.437811			-36(GCTTTATAATGGAAAT,+,0.00),-4(CTATAGTGGTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-614	chr11	116024464	116024664	+	3.19526	NA	promoter-TSS (NM_008211)	promoter-TSS (NM_008211)	-60	NM_008211	15081	Mm.18516	NM_008211	ENSMUSG00000016559	H3f3b	9430068D06Rik|H3.3B	H3 histone, family 3B	protein-coding	0.105000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-1506	chr18	82912364	82912564	+	3.19526	NA	intron (NM_183033, intron 1 of 5)	intron (NM_183033, intron 1 of 5)	1585	NM_183033	329003	Mm.326526	NM_183033	ENSMUSG00000058881	Zfp516	C330029B10Rik|D230016L03|Zfp26l|Znf516|mKIAA0222	zinc finger protein 516	protein-coding	0.020000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-1870	chr3	36433648	36433848	+	3.19526	NA	Intergenic	RLTR13B4|LTR|ERVK	41776	NR_105976	102466786		NR_105976	ENSMUSG00000098808	Mir7009	Gm27472|mmu-mir-7009	microRNA 7009	ncRNA	0.005000	0.393035	56(ATTGCATTATTCATG,+,0.00),56(ATTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2280	chr5	80077812	80078012	+	3.19526	NA	Intergenic	Intergenic	-942659	NM_001347368	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Adgrl3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|Lphn3|mKIAA0768	adhesion G protein-coupled receptor L3	protein-coding	0.000000	0.383085	16(CCTGCATTATTCATA,+,0.00),16(CCTGCATTATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1249	chr16	49318992	49319192	+	3.19526	NA	Intergenic	Intergenic	261692	NM_001166210	667772	Mm.301387	NM_001166210	ENSMUSG00000092009	Myh15	EG667772	myosin, heavy chain 15	protein-coding	0.005000	0.393035	16(AATGAATAATTCATA,+,0.00),16(AATGAATAATTCATA,-,0.00)		-5(GTGTCCATGACAATGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2282	chr5	81028301	81028501	+	3.19526	NA	intron (NM_198702, intron 1 of 27)	intron (NM_198702, intron 1 of 27)	6808	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Adgrl3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|Lphn3|mKIAA0768	adhesion G protein-coupled receptor L3	protein-coding	0.000000	0.343284	29(CATGAATTATGCAAA,+,0.00),29(CATGAATTATGCAAA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-505	chr11	65685019	65685219	+	3.19526	NA	Intergenic	L1M4a1|LINE|L1	49713	NR_030417	791070		NR_030417	ENSMUSG00000076460	Mir744	Mirn744|mir-744|mmu-mir-744	microRNA 744	ncRNA	0.010000	0.268657		-94(ATTTAATATGCATA,+,0.00)	
merged_common-74	chr13	24648868	24649068	+	3.19526	NA	intron (NM_029679, intron 1 of 22)	intron (NM_029679, intron 1 of 22)	10320	NM_029679	193385	Mm.217319	NM_029679	ENSMUSG00000036006	Ripor2	Fam65b	RHO family interacting cell polarization regulator 2	protein-coding	0.005000	0.353234			-28(ATTTGCATCACAAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2018	chr3	144411081	144411281	+	3.19526	NA	Intergenic	Intergenic	159035	NM_001355234	23908	Mm.12863	NM_011828	ENSMUSG00000040151	Hs2st1	2OST|AW214369|Hs2st|mKIAA0448	heparan sulfate 2-O-sulfotransferase 1	protein-coding	0.010000	0.512438			11(ATTTGCAAGGCAAATG,-,0.00)
merged_common-237	chr9	70885356	70885556	+	3.19526	NA	intron (NM_001324473, intron 1 of 8)	intron (NM_001324473, intron 1 of 8)	49352	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding	0.000000	0.318408			16(ACATTGTTAAGGAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-450	chr11	33300577	33300777	+	3.19526	NA	intron (NM_023146, intron 19 of 27)	intron (NM_023146, intron 19 of 27)	-97089	NM_019916	27140	Mm.25362	NM_019916	ENSMUSG00000040610	Tlx3	Hox11l2|Rnx|Tlx1l2	T cell leukemia, homeobox 3	protein-coding	0.005000	0.338308	68(CATGTATTATTTATT,+,0.00),68(CATGTATTATTTATT,-,0.00)		-59(ATTTTCATAACAATAT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1346	chr17	30664760	30664960	+	3.19526	NA	intron (NM_013811, intron 13 of 92)	RLTR20B1|LTR|ERVK	37924	NM_013811	13417	Mm.426017	NM_013811	ENSMUSG00000033826	Dnah8	ATPase|Dnahc8|Hst6.7b|P1-Loop	dynein, axonemal, heavy chain 8	protein-coding	0.030000	0.502488		-81(TATTCATATTCATG,+,0.00),-81(TATTCATATTCATG,-,0.00)	
merged_common-124	chr18	53216272	53216472	+	3.19526	NA	intron (NM_026386, intron 11 of 14)	intron (NM_026386, intron 11 of 14)	-29253	NM_001370761	69226	Mm.32414	NM_029394	ENSMUSG00000024535	Snx24	2810011K15Rik|5730433I16Rik|AI451341	sorting nexing 24	protein-coding	0.015000	0.353234			-64(GTATTATTATGCTTAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1107	chr15	51770000	51770200	+	3.19526	NA	Intergenic	RLTR13B4|LTR|ERVK	95361	NM_080635	68135	Mm.289800	NM_080635	ENSMUSG00000022312	Eif3h	1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3	eukaryotic translation initiation factor 3, subunit H	protein-coding	0.000000	0.398010	53(AATGCATTATTCATG,+,0.00),53(AATGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1730	chr2	102003429	102003629	+	3.19526	NA	intron (NM_178886, intron 4 of 5)	intron (NM_178886, intron 4 of 5)	117267	NM_029635	76501	Mm.330424	NM_029635	ENSMUSG00000027163	Commd9	1810029F08Rik|AA409293	COMM domain containing 9	protein-coding	0.025000	0.492537			
ePOU_nocontrol_ChIP_peaks_unique-2434	chr6	50815143	50815343	+	3.19526	NA	TTS (NR_045984)	TTS (NR_045984)	39128	NR_045984	319981	Mm.131454	NR_045984	ENSMUSG00000107667	C530044C16Rik	-	RIKEN cDNA C530044C16 gene	ncRNA	0.020000	0.447761	-23(CATGAATAATGCATT,+,0.00),-23(CATGAATAATGCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2572	chr7	37514685	37514885	+	3.19526	NA	intron (NM_172385, intron 4 of 5)	intron (NM_172385, intron 4 of 5)	254967	NM_172385	243937	Mm.322505	NM_172385	ENSMUSG00000043456	Zfp536	9630010P11Rik|Znf536|mKIAA0390	zinc finger protein 536	protein-coding	0.015000	0.517413			
ePOU_nocontrol_ChIP_peaks_unique-98	chr1	86236789	86236989	+	3.19526	NA	intron (NM_030184, intron 19 of 24)	L1_Mur3|LINE|L1	-66332	NM_145222	227327	Mm.86467	NM_145222	ENSMUSG00000079445	B3gnt7	C330001H22Rik|beta-3GnT7	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	protein-coding	0.005000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-1492	chr18	69746170	69746370	+	3.19526	NA	Intergenic	X6B_LINE|LINE|CR1	-179289	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding	0.010000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-2012	chr3	142343960	142344160	+	3.19526	NA	intron (NM_001190856, intron 3 of 14)	intron (NM_001190856, intron 3 of 14)	47790	NM_001190857	56376	Mm.117709	NM_019808	ENSMUSG00000028273	Pdlim5	1110001A05Rik|AI987914|C87059|Enh|Enh1|Enh2|Enh3|LIM	PDZ and LIM domain 5	protein-coding	0.000000	0.318408			
ePOU_nocontrol_ChIP_peaks_unique-1147	chr15	86277179	86277379	+	3.19526	NA	promoter-TSS (NM_001358062)	promoter-TSS (NM_001358062)	-396	NM_001358062	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding	0.010000	0.333333	72(AATGAATAATGCATG,+,0.00),72(AATGAATAATGCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-471	chr11	43066320	43066520	+	3.19526	NA	Intergenic	L1MA8|LINE|L1	-83457	NM_176999	319767	Mm.252339	NM_176999	ENSMUSG00000055415	Atp10b	5930426O13Rik|9030605H24Rik	ATPase, class V, type 10B	protein-coding	0.000000	0.313433	-35(AATGCATTATTCATA,+,0.00),-35(AATGCATTATTCATA,-,0.00)		-46(ATTTGCAAAAAAATGC,-,0.00),7(ATTTAAAAAATAAACT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-373	chr10	95531411	95531611	+	3.19526	NA	intron (NM_080560, intron 1 of 3)	intron (NM_080560, intron 1 of 3)	16349	NM_080560	93765	Mm.371667	NM_080560	ENSMUSG00000074781	Ube2n	1500026J17Rik|AL022654|BB101821|UBC13	ubiquitin-conjugating enzyme E2N	protein-coding	0.005000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-1565	chr19	32757515	32757715	+	3.19526	NA	promoter-TSS (NM_008960)	promoter-TSS (NM_008960)	38	NM_008960	19211	Mm.245395	NM_008960	ENSMUSG00000013663	Pten	2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|PTENbeta|TEP1	phosphatase and tensin homolog	protein-coding	0.110000	0.696517			
ePOU_nocontrol_ChIP_peaks_unique-454	chr11	35927271	35927471	+	3.19526	NA	intron (NM_170779, intron 1 of 22)	intron (NM_170779, intron 1 of 22)	53156	NM_170779	211652	Mm.31267	NM_170779	ENSMUSG00000018849	Wwc1	AA408228|AU017197|BC037006|Kibra	WW, C2 and coiled-coil domain containing 1	protein-coding	0.035000	0.492537	-45(TATGAATTATTCATT,+,0.00),-45(TATGAATTATTCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2843	chr9	21936825	21937025	+	3.19526	NA	promoter-TSS (NM_001290299)	promoter-TSS (NM_001290299)	-85	NM_001290299	235044	Mm.277521	NM_144935	ENSMUSG00000040563	Plppr2	Lppr2|PRG-4	phospholipid phosphatase related 2	protein-coding	0.045000	0.601990			-65(TCTGTGTTATGCAAAT,+,0.00),6(ACTGGGTTATGCAAAT,+,0.00),41(ACTGGGTTATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2190	chr4_GL456216_random	31630	31830	+	3.19526	NA	intron (NM_001368262, intron 3 of 5)	intron (NM_001368262, intron 3 of 5)	15572	NM_001368261	236082	Mm.305345	NM_001033326	ENSMUSG00000063897	Dhrsx	C80877|D4Ertd296e|Dhrsxy|Pscad	dehydrogenase/reductase (SDR family) X chromosome	protein-coding	0.040000	0.462687		-60(CGTGAATATTCATG,+,0.00),-60(CGTGAATATTCATG,-,0.00),58(TCTGAATATTTATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1426	chr18	13742215	13742415	+	3.06136	NA	intron (NM_145492, intron 5 of 7)	intron (NM_145492, intron 5 of 7)	230418	NM_145492	225207	Mm.40325	NM_145492	ENSMUSG00000024420	Zfp521	B930086A16Rik|Evi3|Znf521	zinc finger protein 521	protein-coding	0.005000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-286	chr10	31547622	31547822	+	3.03671	NA	intron (NM_001146349, intron 1 of 5)	intron (NM_001146349, intron 1 of 5)	62003	NM_001146349	268291	Mm.295212	NM_001146349	ENSMUSG00000063760	Rnf217	AU016819|Ibrdc1	ring finger protein 217	protein-coding	0.000000	0.298507	-8(TATGCATTATTCAAC,+,0.00),-8(TATGCATTATTCAAC,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1018	chr14	86898744	86898944	+	3.03671	NA	intron (NM_019670, intron 20 of 27)	intron (NM_019670, intron 20 of 27)	242380	NM_019670	56419	Mm.440585	NM_019670	ENSMUSG00000022021	Diaph3	4930417P13Rik|Dia2|Diap3|Drf3|p134MDia2	diaphanous related formin 3	protein-coding	0.000000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-1042	chr14	120595921	120596121	+	3.03671	NA	Intergenic	Intergenic	117560	NM_029519	76108	Mm.261448	NM_029519	ENSMUSG00000051615	Rap2a	5830461H18Rik	RAS related protein 2a	protein-coding	0.000000	0.378109	3(CATACATAATTCATG,+,0.00),3(CATACATAATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1243	chr16	43546897	43547097	+	3.03671	NA	intron (NM_181058, intron 3 of 6)	intron (NM_181058, intron 3 of 6)	-93658	NR_030576	100124467		NR_030576	ENSMUSG00000076372	Mir568	Mirn568|mmu-mir-568	microRNA 568	ncRNA	0.015000	0.388060			-58(CCTTTGCCAGGCAGAT,+,0.00),74(ATATGAAAGGAAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2540	chr6	144742775	144742975	+	3.03671	NA	Intergenic	Intergenic	70007	NR_040519	66760	Mm.233631	NR_040519	ENSMUSG00000085785	Sox5os3	4933425H06Rik	SRY (sex determining region Y)-box 5, opposite strand 3	ncRNA	0.010000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-868	chr13	85066688	85066888	+	3.03671	NA	Intergenic	Intergenic	-122597	NM_001347588	66671	Mm.18474	NM_023243	ENSMUSG00000021548	Ccnh	6330408H09Rik|AI661354|AV102684|AW538719	cyclin H	protein-coding	0.010000	0.393035	22(CATGCATTATTCATA,+,0.00),22(CATGCATTATTCATA,-,0.00)		43(GCATGTTTATGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-441	chr11	23255751	23255951	+	3.03671	NA	promoter-TSS (NM_134014)	promoter-TSS (NM_134014)	-190	NM_134014	103573	Mm.217547	NM_134014	ENSMUSG00000020290	Xpo1	AA420417|Crm1|Exp1	exportin 1	protein-coding	0.095000	0.701493			
ePOU_nocontrol_ChIP_peaks_unique-2711	chr8	34542719	34542919	+	3.03671	NA	Intergenic	Intergenic	97497	NR_040706	330734	Mm.149998	NR_040706	ENSMUSG00000109819	B930018H19Rik	B930018H19	RIKEN cDNA B930018H19 gene	ncRNA	0.005000	0.432836			
merged_common-52	chr11	119041012	119041212	+	3.03671	NA	promoter-TSS (NM_013926)	promoter-TSS (NM_013926)	-199	NM_013926	30951	Mm.99953	NM_013926	ENSMUSG00000025578	Cbx8	Pc3	chromobox 8	protein-coding	0.095000	0.661692			
ePOU_nocontrol_ChIP_peaks_unique-1911	chr3	65950501	65950701	+	3.03671	NA	intron (NM_001355433, intron 5 of 11)	intron (NM_001355433, intron 5 of 11)	7648	NM_001355432	56706	Mm.175612	NM_019937	ENSMUSG00000027829	Ccnl1	2610030E23Rik|AU018493|Ccnl|ania-6a	cyclin L1	protein-coding	0.010000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-1995	chr3	119725860	119726060	+	3.03671	NA	intron (NM_001310711, intron 9 of 13)	intron (NM_001310711, intron 9 of 13)	57428	NM_019550	56195	Mm.29966	NM_019550	ENSMUSG00000028134	Ptbp2	Ptb2|brPTB|nPTB	polypyrimidine tract binding protein 2	protein-coding	0.005000	0.268657		5(AATGAATATACATA,+,0.00),5(AATGAATATACATA,-,0.00)	10(ATATACATAAAAAGAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1108	chr15	52378575	52378775	+	3.03671	NA	Intergenic	MIR|SINE|MIR	83122	NM_172816	239436	Mm.208831	NM_172816	ENSMUSG00000022315	Slc30a8	C820002P14Rik|ZnT-8|ZnT8	solute carrier family 30 (zinc transporter), member 8	protein-coding	0.005000	0.338308	56(TTTGCATTATTCATG,+,0.00),56(TTTGCATTATTCATG,-,0.00)	50(CATTCATTTGCATT,+,0.00)	66(TCATGTTTATGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1941	chr3	84219159	84219359	+	3.03671	NA	intron (NM_001271726, intron 1 of 11)	intron (NM_001271726, intron 1 of 11)	1618	NM_030706	80890	Mm.44876	NM_030706	ENSMUSG00000027993	Trim2	mKIAA0517|narf	tripartite motif-containing 2	protein-coding	0.000000	0.427861			-13(TCTTTGCAATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2326	chr5	117119970	117120170	+	3.03671	NA	promoter-TSS (NM_001199685)	promoter-TSS (NM_001199685)	-59	NM_001199685	330177	Mm.24343	NM_183306	ENSMUSG00000061288	Taok3	2900006A08Rik|A130052D22|A430105I05Rik	TAO kinase 3	protein-coding	0.110000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-1827	chr2	166552132	166552332	+	3.03671	NA	Intergenic	Intergenic	-12290	NR_152154	433503	Mm.491336	NR_152154		Gm29679	-	predicted gene, 29679	ncRNA	0.035000	0.467662			-30(CTCTTGTGTTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-844	chr13	58694763	58694963	+	3.03671	NA	Intergenic	Intergenic	67448	NR_045469	67585	Mm.84751	NR_045469	ENSMUSG00000114384	4930455J16Rik	-	RIKEN cDNA 4930455J16 gene	ncRNA	0.010000	0.398010	-1(CATGCATTATACATG,+,0.00),-1(CATGCATTATACATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2882	chr9	56359952	56360152	+	3.03671	NA	intron (NM_172924, intron 2 of 6)	intron (NM_172924, intron 2 of 6)	57998	NM_172924	244895	Mm.490331	NM_172924	ENSMUSG00000074305	Peak1	1110049L02Rik|9530046P14|AA690169|BE132841|C230081A13Rik|SGK269|mKIAA2002	pseudopodium-enriched atypical kinase 1	protein-coding	0.005000	0.318408			
ePOU_nocontrol_ChIP_peaks_unique-1126	chr15	71196078	71196278	+	3.03671	NA	Intergenic	Intergenic	531660	NM_177819	70363	Mm.126450	NM_177819	ENSMUSG00000036800	Fam135b	1700010C24Rik|A830008O07Rik	family with sequence similarity 135, member B	protein-coding	0.005000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-2481	chr6	93047694	93047894	+	3.03671	NA	intron (NR_015530, intron 1 of 2)	intron (NR_015530, intron 1 of 2)	-104260	NM_175314	101401	Mm.158235	NM_175314	ENSMUSG00000030022	Adamts9	1810011L16Rik|8430403M15Rik|AW743315|E030027K14Rik|Gsfund3|Mhdaund3|Mhdaund4|UND3|UND4	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9	protein-coding	0.010000	0.373134	8(AATGCATAATGCATA,+,0.00),8(AATGCATAATGCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2022	chr3	146327898	146328098	+	3.03671	NA	Intergenic	Intergenic	50946	NR_033542	100038607	Mm.365888	NR_033542	ENSMUSG00000105602	Gm10636	-	predicted gene 10636	ncRNA	0.025000	0.502488	-19(CATGAATTAAACATT,+,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-122	chr1	110447663	110447863	+	3.03671	NA	Intergenic	Intergenic	464040	NM_172853	241201	Mm.213407	NM_172853	ENSMUSG00000026312	Cdh7	9330156F07Rik|CDH7L1	cadherin 7, type 2	protein-coding	0.000000	0.318408			
ePOU_nocontrol_ChIP_peaks_unique-2886	chr9	58916194	58916394	+	3.03671	NA	intron (NM_001042752, intron 13 of 27)	intron (NM_001042752, intron 13 of 27)	93345	NM_001081192	330953	Mm.151967	NM_001081192	ENSMUSG00000032338	Hcn4	Bcng3|Hcn3	hyperpolarization-activated, cyclic nucleotide-gated K+ 4	protein-coding	0.005000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-1648	chr2	26894800	26895000	+	3.03671	NA	intron (NM_009298, intron 3 of 4)	RLTR13D5|LTR|ERVK	7987	NM_009298	20935	Mm.245577	NM_009298	ENSMUSG00000036160	Surf6	D2Wsu129e|Surf-6	surfeit gene 6	protein-coding	0.005000	0.417910	-45(GTTGCATTATTCATG,+,0.00),-45(GTTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1366	chr17	50292865	50293065	+	3.03671	NA	intron (NM_001277863, intron 1 of 9)	CpG	655	NM_010021	13164	Mm.280641	NM_010021	ENSMUSG00000010592	Dazl	Daz-like|Dazh|Dazl1|Dazla|Tpx-2|Tpx2	deleted in azoospermia-like	protein-coding	0.150000	0.810945			
ePOU_nocontrol_ChIP_peaks_unique-360	chr10	86196445	86196645	+	3.03671	NA	intron (NM_013722, intron 6 of 13)	intron (NM_013722, intron 6 of 13)	100691	NR_038024	78170	Mm.444790	NR_038024	ENSMUSG00000112493	4930486F22Rik	-	RIKEN cDNA 4930486F22 gene	ncRNA	0.000000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-864	chr13	83074415	83074615	+	3.03671	NA	Intergenic	Intergenic	-376182	NR_039537	100628621		NR_039537	ENSMUSG00000106655	Mir3961	mmu-mir-3961	microRNA 3961	ncRNA	0.000000	0.407960	-34(TATGCATTATTCATG,+,0.00),-34(TATGCATTATTCATG,-,0.00)		-79(TTCCTCTTTTGCAAAT,+,0.00),-30(CATTATTCATGCAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-596	chr11	105210318	105210518	+	3.03671	NA	intron (NM_001361996, intron 5 of 19)	intron (NM_001361996, intron 5 of 19)	28891	NM_001294330	24086	Mm.126976	NM_011903	ENSMUSG00000020694	Tlk2	4933403M19Rik|PKU-alpha|PKUalpha|Tlk	tousled-like kinase 2 (Arabidopsis)	protein-coding	0.000000	0.323383			
ePOU_nocontrol_ChIP_peaks_unique-608	chr11	110257978	110258178	+	3.03671	NA	Intergenic	ORR1C2-int|LTR|ERVL-MaLR	-6302	NM_001166557	76184	Mm.159704	NM_147218	ENSMUSG00000044749	Abca6	6330565N06Rik	ATP-binding cassette, sub-family A (ABC1), member 6	protein-coding	0.005000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-725	chr12	79754288	79754488	+	3.03671	NA	intron (NM_009014, intron 8 of 10)	intron (NM_009014, intron 8 of 10)	170345	NR_131075	77290	Mm.395042	NR_131073	ENSMUSG00000112765	9430078K24Rik	-	RIKEN cDNA 9430078K24 gene	ncRNA	0.010000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-1945	chr3	85565626	85565826	+	3.03671	NA	Intergenic	Intergenic	-8403	NM_144896	229487	Mm.52275	NM_144896	ENSMUSG00000028085	Gatb	9430026F02Rik|Pet112|Pet112l	glutamyl-tRNA(Gln) amidotransferase, subunit B	protein-coding	0.000000	0.313433			83(ATTTTCACAACAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-227	chr1	188998887	188999087	+	3.03671	NA	intron (NM_001359576, intron 4 of 17)	intron (NM_001359576, intron 4 of 17)	8853	NM_001359578	226823	Mm.209880	NM_172650	ENSMUSG00000026608	Kctd3	4930438A20Rik|9330185B06|E330032J19Rik|NY-REN-45	potassium channel tetramerisation domain containing 3	protein-coding	0.005000	0.487562			-49(CTTTAAATGACAAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2130	chr4	100865844	100866044	+	3.03671	NA	intron (NM_198037, intron 2 of 26)	intron (NM_198037, intron 2 of 26)	89265	NM_198037	320508	Mm.151962	NM_198037	ENSMUSG00000028532	Cachd1	1190007F10Rik|AI852726|B430218L07Rik|Vwcd1|mKIAA1573	cache domain containing 1	protein-coding	0.015000	0.412935		-38(AATGCATAATGATG,-,0.00)	-35(GCATAATGATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-525	chr11	73202132	73202332	+	3.03671	NA	intron (NM_029031, intron 1 of 6)	MER33|DNA|hAT-Charlie	2750	NM_029031	74637	Mm.200905	NM_029031	ENSMUSG00000005951	Shpk	4930431K22Rik|AI194947|AW260459|Carkl	sedoheptulokinase	protein-coding	0.000000	0.383085	-47(TATGCATTATTCATA,+,0.00),-47(TATGCATTATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1010	chr14	76221123	76221323	+	3.03671	NA	Intergenic	Intergenic	-30239	NR_152108	72893	Mm.233565	NR_152108		2900040C04Rik	-	RIKEN cDNA 2900040C04 gene	ncRNA	0.015000	0.447761		-33(CATAAATTTGCATA,+,0.00)	-28(ATTTGCATAACCGATG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-232	chr1	191694424	191694624	+	3.03671	NA	Intergenic	L1MC4|LINE|L1	-23500	NM_172266	226856	Mm.277958	NM_172266	ENSMUSG00000026623	Lpgat1	AI649174|AW112037|BC013667	lysophosphatidylglycerol acyltransferase 1	protein-coding	0.000000	0.318408	40(TATGCATTATGCATG,+,0.00),40(TATGCATTATGCATG,-,0.00)	34(GATGACTATGCATT,+,0.00),34(GATGACTATGCATT,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2157	chr4	128924787	128924987	+	3.03671	NA	Intergenic	Intergenic	37568	NM_001301841	242669	Mm.215814	NM_172875	ENSMUSG00000028789	Azin2	4933429I20Rik|Adc|Azi2|B930082O19|ODC-p|Odcp	antizyme inhibitor 2	protein-coding	0.030000	0.512438			
ePOU_nocontrol_ChIP_peaks_unique-1636	chr2	20450714	20450914	+	3.03671	NA	intron (NM_001081006, intron 2 of 21)	intron (NM_001081006, intron 2 of 21)	-59233	NM_029895	208618	Mm.237935	NM_029895	ENSMUSG00000036617	Etl4	6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt	enhancer trap locus 4	protein-coding	0.005000	0.368159			46(GTTTTGTTTTTTTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1654	chr2	30737779	30737979	+	3.03671	NA	Intergenic	Intergenic	16669	NR_037272	100526499		NR_037272	ENSMUSG00000093091	Mir3089	mir-3089|mmu-mir-3089	microRNA 3089	ncRNA	0.010000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-2611	chr7	81796282	81796482	+	3.03671	NA	intron (NM_146193, intron 6 of 7)	intron (NM_146193, intron 6 of 7)	-6927	NM_001370770	67290	Mm.248391	NM_026077	ENSMUSG00000025102	3110040N11Rik	AI851475	RIKEN cDNA 3110040N11 gene	protein-coding	0.005000	0.278607			53(CTTTTGTTTTGTTGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2651	chr7	114117717	114117917	+	2.90281	NA	promoter-TSS (NM_025846)	promoter-TSS (NM_025846)	-36	NM_025846	66922	Mm.276572	NM_025846	ENSMUSG00000055723	Rras2	2610016H24Rik|C86394|TC21	related RAS viral (r-ras) oncogene 2	protein-coding	0.085000	0.691542		-10(ACTACATATGCATG,+,0.00),-10(ACTACATATGCATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1630	chr2	15065362	15065562	+	2.85697	NA	intron (NM_029466, intron 1 of 5)	intron (NM_029466, intron 1 of 5)	10142	NM_029466	75869	Mm.174068	NM_029466	ENSMUSG00000017418	Arl5b	4930587A11Rik|AW146430|Arl8	ADP-ribosylation factor-like 5B	protein-coding	0.005000	0.398010	2(AATGCATTATTCATG,+,0.00),2(AATGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1164	chr15	99378399	99378599	+	2.85697	NA	Intergenic	B3A|SINE|B2	-8017	NM_001310622	22379	Mm.29043	NM_011711	ENSMUSG00000023008	Fmnl3	2700073B04Rik|FBP11|Wbp3|mKIAA2014	formin-like 3	protein-coding	0.005000	0.467662		1(TATGCATATGCATA,+,0.00),1(TATGCATATGCATA,-,0.00),7(TATGCATATGTATG,+,0.00),7(TATGCATATGTATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-308	chr10	44018835	44019035	+	2.85697	NA	intron (NM_001368305, intron 2 of 21)	intron (NM_001368305, intron 2 of 21)	3340	NM_001368306	11630	Mm.292082	NM_172393	ENSMUSG00000019866	Crybg1	Aim1	crystallin beta-gamma domain containing 1	protein-coding	0.010000	0.308458	51(TATGTATTATGCATC,+,0.00),51(TATGTATTATGCATC,-,0.00)		6(GCATTATCATGGATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2524	chr6	135444697	135444897	+	2.85697	NA	Intergenic	Intergenic	77304	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding	0.050000	0.572139			
ePOU_nocontrol_ChIP_peaks_unique-633	chr11	121802473	121802673	+	2.85697	NA	Intergenic	Intergenic	-27645	NM_029049	74675	Mm.61213	NM_029049	ENSMUSG00000039198	Ptchd3	4930451E13Rik|4933440L20Rik|RNDEu-3	patched domain containing 3	protein-coding	0.005000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-51	chr1	51835490	51835690	+	2.85697	NA	intron (NM_001161817, intron 3 of 30)	intron (NM_001161817, intron 3 of 30)	80388	NM_010863	17912	Mm.3390	NM_010863	ENSMUSG00000018417	Myo1b	AA406997|MIH-L|MMIa	myosin IB	protein-coding	0.005000	0.492537		-37(AATGAATTTGCAAG,-,0.00)	-32(ATTTGCAAGGCAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1111	chr15	57733487	57733687	+	2.85697	NA	intron (NM_199449, intron 1 of 3)	intron (NM_199449, intron 1 of 3)	38920	NM_199449	387609	Mm.36557	NM_199449	ENSMUSG00000071757	Zhx2	Afr-1|Afr1|Raf|mKIAA0854	zinc fingers and homeoboxes 2	protein-coding	0.010000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-2881	chr9	56357716	56357916	+	2.85697	NA	intron (NM_172924, intron 2 of 6)	intron (NM_172924, intron 2 of 6)	60234	NM_172924	244895	Mm.490331	NM_172924	ENSMUSG00000074305	Peak1	1110049L02Rik|9530046P14|AA690169|BE132841|C230081A13Rik|SGK269|mKIAA2002	pseudopodium-enriched atypical kinase 1	protein-coding	0.005000	0.378109			-6(TTTAACATAAAAAAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2124	chr4	98322213	98322413	+	2.85697	NA	Intergenic	Intergenic	60952	NM_053157	94043	Mm.331719	NM_053157	ENSMUSG00000028563	Tm2d1	2310026L18Rik|AA990549|Bbp	TM2 domain containing 1	protein-coding	0.080000	0.542289			
ePOU_nocontrol_ChIP_peaks_unique-661	chr12	31995258	31995458	+	2.85697	NA	intron (NM_001364408, intron 2 of 10)	intron (NM_001364408, intron 2 of 10)	-45113	NM_177993	73389	Mm.390461	NM_153198	ENSMUSG00000002996	Hbp1	1700058O05Rik|BE629963|C330012F01Rik|C86454	high mobility group box transcription factor 1	protein-coding	0.000000	0.358209	-21(CATGAATTATTCATA,+,0.00),-21(CATGAATTATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1712	chr2	75786347	75786547	+	2.85697	NA	Intergenic	Intergenic	-45730	NM_172666	228061	Mm.31227	NM_172666	ENSMUSG00000042410	Agps	5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2	alkylglycerone phosphate synthase	protein-coding	0.015000	0.393035			31(CATTTGCATTGTAAAT,+,0.00),32(ATTTGCATTGTAAATG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2046	chr4	6800479	6800679	+	2.85697	NA	intron (NM_145711, intron 3 of 8)	ORR1C2|LTR|ERVL-MaLR	190144	NM_145711	252838	Mm.435828	NM_145711	ENSMUSG00000041272	Tox	1700007F02Rik	thymocyte selection-associated high mobility group box	protein-coding	0.005000	0.447761			-35(GTTTGAATAAGAATGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-302	chr10	40247167	40247367	+	2.85697	NA	promoter-TSS (NM_001042556)	promoter-TSS (NM_001042556)	-228	NM_023323	67239	Mm.11480	NM_023323	ENSMUSG00000038510	Rpf2	2810470K21Rik|AU040229|AU043242|Bxdc1	ribosome production factor 2 homolog	protein-coding	0.035000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-1687	chr2	58672233	58672433	+	2.85697	NA	intron (NM_001289660, intron 1 of 7)	intron (NM_001289660, intron 1 of 7)	-82851	NM_029692	76654	Mm.200370	NM_029692	ENSMUSG00000026839	Upp2	1700124F02Rik|AI266885|UDRPASE2|UP2|UPASE2	uridine phosphorylase 2	protein-coding	0.030000	0.412935	-13(AATGCATAATTCATT,+,0.00),-13(AATGCATAATTCATT,-,0.00)		
merged_common-240	chr9	111182883	111183083	+	2.85697	NA	intron (NM_001164838, intron 5 of 14)	intron (NM_001164838, intron 5 of 14)	64872	NM_001164838	71268	Mm.302287	NM_027742	ENSMUSG00000032497	Lrrfip2	5133400F20Rik|AI850587	leucine rich repeat (in FLII) interacting protein 2	protein-coding	0.005000	0.368159			-63(TTTTACATGACAACAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2349	chr5	135168418	135168618	+	2.85697	NA	exon (NM_009745, exon 1 of 6)	exon (NM_009745, exon 1 of 6)	146	NM_009745	12054	Mm.405834	NM_009745	ENSMUSG00000029681	Bcl7b	-	B cell CLL/lymphoma 7B	protein-coding	0.125000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-976	chr14	59976993	59977193	+	2.85697	NA	intron (NM_015803, intron 23 of 35)	intron (NM_015803, intron 23 of 35)	109821	NM_015803	50769	Mm.319599	NM_015803	ENSMUSG00000021983	Atp8a2	AI415030|Atpc1b|agil|wl	ATPase, aminophospholipid transporter-like, class I, type 8A, member 2	protein-coding	0.025000	0.373134			-55(ATTTCAATGAGCAATA,-,0.00),55(GTTTTGCGATGCATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-239	chr10	3383270	3383470	+	2.85697	NA	intron (NM_133485, intron 1 of 3)	intron (NM_133485, intron 1 of 3)	17220	NM_133485	76142	Mm.308126	NM_133485	ENSMUSG00000040653	Ppp1r14c	6330514J04Rik|KEPI	protein phosphatase 1, regulatory inhibitor subunit 14C	protein-coding	0.010000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-2245	chr5	50014474	50014674	+	2.85697	NA	intron (NM_133911, intron 3 of 18)	intron (NM_133911, intron 3 of 18)	44422	NM_133911	70693	Mm.272974	NM_133911	ENSMUSG00000029090	Adgra3	3830613O22Rik|AU044632|Gpr125|Tem5-like	adhesion G protein-coupled receptor A3	protein-coding	0.000000	0.288557			
ePOU_nocontrol_ChIP_peaks_unique-499	chr11	62551135	62551335	+	2.85697	NA	promoter-TSS (NM_011664)	promoter-TSS (NM_011664)	64	NM_011664	22187	Mm.371592	NM_011664	ENSMUSG00000019505	Ubb	AL033289|Rps27a|Uba52|Ubb2|Ubc	ubiquitin B	protein-coding	0.080000	0.537313			
ePOU_nocontrol_ChIP_peaks_unique-527	chr11	74422694	74422894	+	2.85697	NA	intron (NM_001015046, intron 10 of 24)	intron (NM_001015046, intron 10 of 24)	58123	NM_001011851	258153	Mm.376124	NM_001011851	ENSMUSG00000058275	Olfr412	MOR127-5P	olfactory receptor 412	protein-coding	0.010000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-767	chr12	109948332	109948532	+	2.85697	NA	Intergenic	LTR103_Mam|LTR|ERV1?	200554	NR_037233	100499517		NR_037233	ENSMUSG00000093351	Mir3072	mir-3072|mmu-mir-3072	microRNA 3072	ncRNA	0.025000	0.477612			-37(ATTAACATGTGAATGG,-,0.00),82(TTTTTATGATGCAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1305	chr17	5138887	5139087	+	2.85697	NA	intron (NM_001085355, intron 4 of 19)	intron (NM_001085355, intron 4 of 19)	143913	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding	0.015000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-2701	chr8	23411150	23411350	+	2.85697	NA	promoter-TSS (NM_013834)	promoter-TSS (NM_013834)	-252	NM_013834	20377	Mm.281691	NM_013834	ENSMUSG00000031548	Sfrp1	2210415K03Rik|AW011917|AW107218|AW742929|sFRP-1	secreted frizzled-related protein 1	protein-coding	0.025000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-2912	chr9	77278039	77278239	+	2.85697	NA	intron (NM_001368978, intron 1 of 7)	intron (NM_001368978, intron 1 of 7)	-26287	NM_001368963	69642	Mm.35008	NM_027150	ENSMUSG00000032355	Mlip	2310046A06Rik|AI931782|CIP	muscular LMNA-interacting protein	protein-coding	0.000000	0.402985			-74(ATTTGCAAAGCAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1969	chr3	102108340	102108540	+	2.85697	NA	intron (NM_001355663, intron 1 of 11)	L1MD1|LINE|L1	22025	NM_009814	12373	Mm.15343	NM_009814	ENSMUSG00000027861	Casq2	AA033488|AW146219|Csq2|ESTM52|cCSQ	calsequestrin 2	protein-coding	0.000000	0.427861	-18(CATACATTATTCATG,+,0.00),-18(CATACATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-858	chr13	78937669	78937869	+	2.85697	NA	Intergenic	Intergenic	-738896	NM_010151	13865	Mm.439653	NM_010151	ENSMUSG00000069171	Nr2f1	COUP-TF1|COUP-TFI|COUPTFA|EAR-3|EAR3|Erbal3|SVP44|Tcfcoup1	nuclear receptor subfamily 2, group F, member 1	protein-coding	0.000000	0.388060	-17(AATGCATAATTCATG,+,0.00),-17(AATGCATAATTCATG,-,0.00)		54(CCAGTCTCATATAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-655	chr12	26884366	26884566	+	2.85697	NA	Intergenic	Intergenic	-49915	NR_146399	74668	Mm.375018	NR_146399	ENSMUSG00000113218	4933409F18Rik	4930435E18Rik	RIKEN cDNA 4933409F18 gene	ncRNA	0.020000	0.417910			-4(GTATGCTGATGGAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2256	chr5	64812113	64812313	+	2.85697	NA	intron (NM_008453, intron 1 of 5)	intron (NM_008453, intron 1 of 5)	8690	NM_008453	16599	Mm.392759	NM_008453	ENSMUSG00000029178	Klf3	9930027G08Rik|AL024007|Bklf|Tef-2	Kruppel-like factor 3 (basic)	protein-coding	0.020000	0.512438			-49(ATTTACATGTAAAATC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1376	chr17	64113404	64113604	+	2.85697	NA	intron (NM_001037997, intron 16 of 18)	intron (NM_001037997, intron 16 of 18)	-62832	NR_130982	68771	Mm.443351	NR_130982		1110058D11Rik	-	RIKEN cDNA 1110058D11 gene	ncRNA	0.010000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-2346	chr5	132738160	132738360	+	2.85697	NA	Intergenic	Intergenic	-195040	NM_001363480	319974	Mm.409595	NM_177047	ENSMUSG00000029673	Auts2	2700063G02Rik|A730011F23Rik|D830032G16Rik	autism susceptibility candidate 2	protein-coding	0.020000	0.427861			0(GTATTGTCTTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-406	chr10	127265169	127265369	+	2.85697	NA	promoter-TSS (NM_001190453)	promoter-TSS (NM_001190453)	-993	NM_027151	69654	Mm.167537	NM_027151	ENSMUSG00000025410	Dctn2	2310042E05Rik|C130077D06Rik|C87049|DCTN-50|GMP23-48K|RBP50|p50	dynactin 2	protein-coding	0.015000	0.442786			37(CTATTGTCATGCATTG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1320	chr17	21827233	21827433	+	2.85697	NA	intron (NM_029281, intron 2 of 4)	RLTR13B4|LTR|ERVK	18426	NM_029281	75424	Mm.271252	NM_029281	ENSMUSG00000069743	Zfp820	2610036F08Rik	zinc finger protein 820	protein-coding	0.005000	0.417910	-14(CATGAATAATGCATT,+,0.00),-14(CATGAATAATGCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2193	chr5	5134398	5134598	+	2.85697	NA	intron (NM_011074, intron 6 of 14)	intron (NM_011074, intron 6 of 14)	131570	NM_001310448	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding	0.005000	0.258706			-90(TCATTTATATGTAAAT,+,0.00),-14(ATTAGCAAGATAAAAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1407	chr17	86841139	86841339	+	2.85697	NA	Intergenic	Intergenic	-76109	NM_030104	78469	Mm.67234	NM_030104	ENSMUSG00000037689	Tmem247	1700090G07Rik	transmembrane protein 247	protein-coding	0.010000	0.333333			-59(ATATGCAAAAATATGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2115	chr4	86786444	86786644	+	2.85697	NA	intron (NM_184088, intron 6 of 31)	intron (NM_184088, intron 6 of 31)	37989	NM_184088	329877	Mm.273718	NM_184088	ENSMUSG00000038024	Dennd4c	1700065A05Rik|AA420392	DENN/MADD domain containing 4C	protein-coding	0.005000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-2271	chr5	74753151	74753351	+	2.85697	NA	Intergenic	Intergenic	-50348	NM_001159577	16924	Mm.440403	NM_010727	ENSMUSG00000029228	Lnx1	Lnx	ligand of numb-protein X 1	protein-coding	0.005000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-170	chr1	157153905	157154105	+	2.85697	NA	intron (NM_177644, intron 14 of 17)	intron (NM_177644, intron 14 of 17)	-45325	NM_001305063	73435	Mm.116705	NM_028540	ENSMUSG00000026592	Tex35	1700057K13Rik	testis expressed 35	protein-coding	0.000000	0.383085			-37(ATTTGCATGGACAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1976	chr3	105687424	105687624	+	2.85697	NA	promoter-TSS (NM_017397)	promoter-TSS (NM_017397)	47	NM_017397	53975	Mm.272826	NM_017397	ENSMUSG00000027905	Ddx20	GEMIN3|dp103	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	protein-coding	0.065000	0.547264			
ePOU_nocontrol_ChIP_peaks_unique-885	chr13	97407316	97407516	+	2.85697	NA	Intergenic	Intergenic	-27554	NR_110432	100039691	Mm.219358	NR_110430	ENSMUSG00000078952	Lncenc1	Gm11019|Gm2373|Lincenc1|Platr18|linc-Enc1	long non-coding RNA, embryonic stem cells expressed 1	ncRNA	0.015000	0.328358			-39(TCATTTTTAAGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1962	chr3	97358890	97359090	+	2.85697	NA	Intergenic	Intergenic	52189	NM_146275	258272	Mm.377406	NM_146275	ENSMUSG00000051392	Olfr1402	MOR217-1	olfactory receptor 1402	protein-coding	0.000000	0.263682	-35(TATGAATAATTTATT,+,0.00),-35(TATGAATAATTTATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-793	chr13	15699920	15700120	+	2.85697	NA	intron (NM_008130, intron 10 of 14)	intron (NM_008130, intron 10 of 14)	102610	NR_045507	71071	Mm.380845	NR_045507	ENSMUSG00000113960	4933412O06Rik	-	RIKEN cDNA 4933412O06 gene	ncRNA	0.000000	0.447761			
ePOU_nocontrol_ChIP_peaks_unique-772	chr12	113156158	113156358	+	2.85697	NA	promoter-TSS (NM_134041)	promoter-TSS (NM_134041)	-163	NM_134041	104732	Mm.87616	NM_134041	ENSMUSG00000037466	Tedc1	4930427A07Rik|AA536649|mFLJ00116	tubulin epsilon and delta complex 1	protein-coding	0.080000	0.631841			
ePOU_nocontrol_ChIP_peaks_unique-906	chr13	112304547	112304747	+	2.85697	NA	intron (NM_001168405, intron 1 of 5)	MurERV4-int|LTR|ERVK	16129	NM_001168404	77318	Mm.159895	NM_029898	ENSMUSG00000049985	Ankrd55	C030011J08Rik	ankyrin repeat domain 55	protein-coding	0.010000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-542	chr11	83357728	83357928	+	2.85697	NA	intron (NM_027915, intron 14 of 20)	RCHARR1|DNA|hAT-Charlie	-51309	NM_001361566	276952	Mm.66275	NM_001013386	ENSMUSG00000020684	Rasl10b	B230331P10Rik|Gm729|VTS58635	RAS-like, family 10, member B	protein-coding	0.015000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-2216	chr5	29506613	29506813	+	2.85697	NA	Intergenic	Intergenic	-28243	NM_019944	15285	Mm.103760	NM_019944	ENSMUSG00000001566	Mnx1	HB9|Hlxb9|MNR2	motor neuron and pancreas homeobox 1	protein-coding	0.005000	0.398010			-29(ATTAGCATAATAAAAT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1463	chr18	52682042	52682242	+	2.85697	NA	Intergenic	Intergenic	-11537	NM_010293	14625	Mm.32242	NM_010293	ENSMUSG00000053624	Gykl1	AI449806|Gk-rs1	glycerol kinase-like 1	protein-coding	0.000000	0.353234		26(TATGCATATTCAGA,+,0.00),26(TATGCATATTCAGA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2486	chr6	99122357	99122557	+	2.85697	NA	intron (NM_053202, intron 4 of 18)	intron (NM_053202, intron 4 of 18)	62562	NR_162807	114482918		NR_162807		Mir12201	mmu-mir-12201	microRNA mir-12201	ncRNA	0.000000	0.358209			-19(ATTTGCAATAAAATTT,-,0.00),8(TATTTCCTTTGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2571	chr7	35721787	35721987	+	2.85697	NA	intron (NM_178704, intron 7 of 18)	intron (NM_178704, intron 7 of 18)	32567	NM_178704	233115	Mm.257808	NM_178704	ENSMUSG00000043671	Dpy19l3	6030410G08|9330164H19Rik	dpy-19-like 3 (C. elegans)	protein-coding	0.025000	0.417910			-34(ATATTCTCATATAAAT,+,0.00),71(TTTTGCAGAACAATGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2981	chrX	52288797	52288997	+	2.85697	NA	intron (NM_016697, intron 7 of 7)	intron (NM_016697, intron 7 of 7)	89284	NR_105805	102465202		NR_105805	ENSMUSG00000105738	Mir6384	mmu-mir-6384	microRNA 6384	ncRNA	0.005000	0.437811			-15(ATTAGCAAGGCTAATG,-,0.00)
merged_common-213	chr7	4812587	4812787	+	2.85697	NA	promoter-TSS (NM_133777)	promoter-TSS (NM_133777)	-347	NM_133777	77891	Mm.389787	NM_133777	ENSMUSG00000060860	Ube2s	0910001J09Rik|6720465F12Rik|AA409170|E2-EPF	ubiquitin-conjugating enzyme E2S	protein-coding	0.120000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-495	chr11	60046391	60046591	+	2.85697	NA	promoter-TSS (NM_001290011)	promoter-TSS (NM_001290011)	-2	NM_001290011	18618	Mm.2731	NM_008819	ENSMUSG00000000301	Pemt	PEAMT|PEMT2|PLMT|Pempt|Pempt2	phosphatidylethanolamine N-methyltransferase	protein-coding	0.075000	0.611940			
ePOU_nocontrol_ChIP_peaks_unique-435	chr11	22334244	22334444	+	2.85697	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-47549	NM_001252515	216565	Mm.491265	NM_153078	ENSMUSG00000042302	Ehbp1	AF424697|Flj21950|NACSIN	EH domain binding protein 1	protein-coding	0.005000	0.268657			
ePOU_nocontrol_ChIP_peaks_unique-2525	chr6	136518807	136519007	+	2.85697	NA	promoter-TSS (NM_019426)	promoter-TSS (NM_019426)	56	NM_019426	54343	Mm.173271	NM_019426	ENSMUSG00000030213	Atf7ip	2610204M12Rik|AM|Mcaf1	activating transcription factor 7 interacting protein	protein-coding	0.110000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-1998	chr3	121538791	121538991	+	2.85697	NA	Intergenic	RLTR13D5|LTR|ERVK	-6547	NM_145394	213603	Mm.33062	NM_145394	ENSMUSG00000039865	Slc44a3	BC010552	solute carrier family 44, member 3	protein-coding	0.005000	0.368159	38(ATTGCATTATTCATG,+,0.00),38(ATTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-249	chr10	8998916	8999116	+	2.85697	NA	Intergenic	Intergenic	-112946	NM_175155	70097	Mm.338275	NM_175155	ENSMUSG00000015305	Sash1	1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790	SAM and SH3 domain containing 1	protein-coding	0.010000	0.487562			28(AATCTGCCTTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-653	chr12	25609038	25609238	+	2.85697	NA	Intergenic	Intergenic	479964	NR_045844	432641	Mm.112955	NR_045844		Gm17746	-	predicted gene, 17746	ncRNA	0.005000	0.412935			23(TTTTTCCATTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-997	chr14	67941301	67941501	+	2.85697	NA	Intergenic	Intergenic	-7829	NM_177780	68813	Mm.258155	NM_177780	ENSMUSG00000044447	Dock5	1110060D06Rik|AI666732|AI956923|BC016533|E130320D18|lr2|rlc	dedicator of cytokinesis 5	protein-coding	0.005000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-2871	chr9	48607654	48607854	+	2.85697	NA	Intergenic	L1ME3B|LINE|L1	-2631	NM_001311062	18113	Mm.8362	NM_010924	ENSMUSG00000032271	Nnmt	-	nicotinamide N-methyltransferase	protein-coding	0.005000	0.363184			-93(GTTTCCATGACAACTA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1803	chr2	146218310	146218510	+	2.85697	NA	Intergenic	CpG	-3587	NM_016889	53626	Mm.379070	NM_016889	ENSMUSG00000068154	Insm1	IA-1	insulinoma-associated 1	protein-coding	0.100000	0.656716			
merged_common-215	chr7	16924103	16924303	+	2.85697	NA	promoter-TSS (NM_007590)	promoter-TSS (NM_007590)	-171	NM_007590	12315	Mm.288630	NM_007590	ENSMUSG00000019370	Calm3	CaMA|Cam3|Camc|R75142	calmodulin 3	protein-coding	0.125000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-212	chr1	181038469	181038669	+	2.85697	NA	Intergenic	RLTR13D5|LTR|ERVK	-12668	NM_001033819	619326	Mm.355174	NM_001033819	ENSMUSG00000038768	9130409I23Rik	-	RIKEN cDNA 9130409I23 gene	protein-coding	0.005000	0.427861	15(CATGAATAATGCAAT,+,0.00),15(CATGAATAATGCAAT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1282	chr16	84774812	84775012	+	2.85697	NA	intron (NM_023844, intron 1 of 9)	intron (NM_023844, intron 1 of 9)	789	NM_023844	67374	Mm.41758	NM_023844	ENSMUSG00000053062	Jam2	1110002N23Rik|2410030G21Rik|2410167M24Rik|JAM-2|JAM-B|Jcam2|VE-JAM	junction adhesion molecule 2	protein-coding	0.055000	0.542289			
ePOU_nocontrol_ChIP_peaks_unique-2414	chr6	34499370	34499570	+	2.85697	NA	intron (NM_001363710, intron 2 of 2)	L1MB8|LINE|L1	23114	NR_156731	12183	Mm.282863	NM_007563	ENSMUSG00000038871	Bpgm	AI323730|AL022789|C86192	2,3-bisphosphoglycerate mutase	protein-coding	0.005000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-425	chr11	11975077	11975277	+	2.85697	NA	intron (NM_001177629, intron 2 of 15)	intron (NM_001177629, intron 2 of 15)	52794	NM_001177629	14783	Mm.273117	NM_010345	ENSMUSG00000020176	Grb10	5730571D09Rik|AI325020|Meg1|mKIAA0207	growth factor receptor bound protein 10	protein-coding	0.020000	0.477612	-4(TTTGCATTATGCATG,+,0.00),-4(TTTGCATTATGCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-550	chr11	86201418	86201618	+	2.85697	NA	promoter-TSS (NM_178309)	promoter-TSS (NM_178309)	158	NR_130958	74038	Mm.171304	NR_130958	ENSMUSG00000085208	Brip1os	4632419I22Rik	BRCA1 interacting protein C-terminal helicase 1, opposite strand	ncRNA	0.080000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-2970	chr9	123851934	123852134	+	2.85697	NA	promoter-TSS (NM_001110253)	promoter-TSS (NM_001110253)	-135	NM_001110253	17281	Mm.252941	NM_148925	ENSMUSG00000025241	Fyco1	2810409M01Rik|Mem2|RUFY3|ZFYVE7	FYVE and coiled-coil domain containing 1	protein-coding	0.080000	0.597015			
ePOU_nocontrol_ChIP_peaks_unique-1548	chr19	17686278	17686478	+	2.85697	NA	intron (NM_001190483, intron 5 of 37)	intron (NM_001190483, intron 5 of 37)	151254	NM_001163144	18552	Mm.3401	NM_001163144	ENSMUSG00000024713	Pcsk5	PC5|PC6|SPC6|b2b1549Clo|b2b585Clo	proprotein convertase subtilisin/kexin type 5	protein-coding	0.000000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-2432	chr6	50392086	50392286	+	2.85697	NA	intron (NM_001347213, intron 2 of 23)	intron (NM_001347213, intron 2 of 23)	-9349	NM_027881	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP-3|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding	0.005000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-242	chr10	4233728	4233928	+	2.85697	NA	Intergenic	Intergenic	-20708	NR_152620	102632515	Mm.416995	NR_152620	ENSMUSG00000111266	Gm30570	-	predicted gene, 30570	ncRNA	0.000000	0.393035			35(ATTTGCAAGTAAAATC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2848	chr9	24078458	24078658	+	2.85697	NA	Intergenic	L1M4|LINE|L1	-19460	NM_175678	319239	Mm.130824	NM_175678	ENSMUSG00000043659	Npsr1	9330128H10Rik|GPRA|Gpr154|MVTR|PGR14|VRR1	neuropeptide S receptor 1	protein-coding	0.000000	0.283582			
ePOU_nocontrol_ChIP_peaks_unique-459	chr11	37808927	37809127	+	2.85697	NA	Intergenic	Intergenic	150038	NR_131154	100039148	Mm.120467	NR_131154	ENSMUSG00000087388	Gm12128	-	predicted gene 12128	ncRNA	0.005000	0.333333			60(ATTTATATAATAAAAT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-257	chr10	13283342	13283542	+	2.85697	NA	intron (NM_001359294, intron 2 of 11)	L1MD|LINE|L1	40847	NM_001195096	215789	Mm.283359	NM_001033257	ENSMUSG00000062866	Phactr2	AV158170|BC012871	phosphatase and actin regulator 2	protein-coding	0.005000	0.323383			
ePOU_nocontrol_ChIP_peaks_unique-1514	chr19	4148014	4148214	+	2.85697	NA	promoter-TSS (NM_011778)	promoter-TSS (NM_011778)	-540	NM_011778	23789	Mm.276859	NM_011778	ENSMUSG00000024835	Coro1b	-	coronin, actin binding protein 1B	protein-coding	0.010000	0.492537	-9(CATGCATTATGCATG,+,0.00),-9(CATGCATTATGCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1647	chr2	26443718	26443918	+	2.85697	NA	intron (NM_153125, intron 1 of 29)	intron (NM_153125, intron 1 of 29)	1398	NM_153125	227648	Mm.206371	NM_153125	ENSMUSG00000026924	Sec16a	AU024582|C230052J16Rik|p250	SEC16 homolog A, endoplasmic reticulum export factor	protein-coding	0.000000	0.368159	20(GATGCATTATTCATG,+,0.00),20(GATGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1820	chr2	162829397	162829597	+	2.85697	NA	Intergenic	Lx9|LINE|L1	-102011	NM_026499	67996	Mm.24042	NM_026499	ENSMUSG00000016921	Srsf6	1210001E11Rik|AI314910|AW146126|Sfrs6	serine/arginine-rich splicing factor 6	protein-coding	0.005000	0.363184		-73(CATACATATACATA,+,0.00),-73(CATACATATACATA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-288	chr10	31646146	31646346	+	2.85697	NA	Intergenic	Intergenic	-36521	NM_001146349	268291	Mm.295212	NM_001146349	ENSMUSG00000063760	Rnf217	AU016819|Ibrdc1	ring finger protein 217	protein-coding	0.005000	0.398010			-60(ATTTTCAAGGAAATAA,-,0.00),85(ATTAACATGACTAAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1664	chr2	34363967	34364167	+	2.85697	NA	intron (NM_001290576, intron 2 of 7)	intron (NM_001290576, intron 2 of 7)	7978	NM_001290576	18516	Mm.239941	NM_016768	ENSMUSG00000038718	Pbx3	-	pre B cell leukemia homeobox 3	protein-coding	0.005000	0.383085			-30(CTTTGCATTGCAAAAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-590	chr11	103115639	103115839	+	2.85697	NA	promoter-TSS (NM_138753)	promoter-TSS (NM_138753)	-586	NM_138753	192231	Mm.8763	NM_138753	ENSMUSG00000048878	Hexim1	7330426E13Rik|CLP-1|Clp1|HIS1	hexamethylene bis-acetamide inducible 1	protein-coding	0.015000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-2263	chr5	67052657	67052857	+	2.85697	NA	intron (NM_001256122, intron 20 of 20)	intron (NM_001256122, intron 20 of 20)	46369	NM_008888	18935	Mm.62505	NM_008888	ENSMUSG00000012520	Phox2b	Dilp1|NBPhox|Pmx2b|Px2b	paired-like homeobox 2b	protein-coding	0.015000	0.398010			37(ATGTAAATGGGAATGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-719	chr12	78225403	78225603	+	2.85697	NA	Intergenic	Intergenic	-1152	NM_145965	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding	0.005000	0.298507			
ePOU_nocontrol_ChIP_peaks_unique-1167	chr15	99818885	99819085	+	2.72306	NA	intron (NM_001113545, intron 4 of 10)	intron (NM_001113545, intron 4 of 10)	1164	NM_023063	65970	Mm.33207	NM_023063	ENSMUSG00000023022	Lima1	Eplin	LIM domain and actin binding 1	protein-coding	0.015000	0.467662			-53(ATTTGCAAGTCAAAAC,-,0.00)
merged_common-34	chr11	8681352	8681552	+	2.72306	NA	Intergenic	RLTR17B_Mm|LTR|ERVK	-16917	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding	0.005000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-758	chr12	100817597	100817797	+	2.72306	NA	intron (NM_001361020, intron 2 of 13)	RLTR13B1|LTR|ERVK	38640	NM_001361020	217830	Mm.218590	NM_145448	ENSMUSG00000021185	Dglucy	9030617O03Rik	D-glutamate cyclase	protein-coding	0.010000	0.417910	-12(CATGAATAATGCAAT,+,0.00),-12(CATGAATAATGCAAT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2862	chr9	41631856	41632056	+	2.72306	NA	Intergenic	Intergenic	50030	NR_029822	387236		NR_029822	ENSMUSG00000093354	Mir125b-1	Mirn125b|Mirn125b-1|mir-125b-1	microRNA 125b-1	ncRNA	0.000000	0.378109	18(CATGAATTATTCATA,+,0.00),18(CATGAATTATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2903	chr9	70542858	70543058	+	2.64946	NA	non-coding (NR_152142, exon 1 of 20)	non-coding (NR_152142, exon 1 of 20)	243	NR_152142	66660	Mm.22379	NM_025690	ENSMUSG00000032212	Sltm	5730455C01Rik|5730555F13Rik|9130215G10Rik|Met	SAFB-like, transcription modulator	protein-coding	0.115000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-1866	chr3	33799741	33799941	+	2.64946	NA	promoter-TSS (NM_001290500)	promoter-TSS (NM_001290500)	-342	NM_001290502	67120	Mm.275710	NM_025978	ENSMUSG00000027677	Ttc14	2700016E08Rik|4930434D01Rik|4931403I22Rik|4933402I15Rik|AI662468|AU014779|AW561908|cI-44|mKIAA1980	tetratricopeptide repeat domain 14	protein-coding	0.070000	0.636816			
ePOU_nocontrol_ChIP_peaks_unique-2570	chr7	34654968	34655168	+	2.64946	NA	promoter-TSS (NM_001360820)	promoter-TSS (NM_001360820)	441	NM_001360818	233107	Mm.76761	NM_146188	ENSMUSG00000030499	Kctd15	BC031749	potassium channel tetramerisation domain containing 15	protein-coding	0.085000	0.601990			
ePOU_nocontrol_ChIP_peaks_unique-1632	chr2	16600945	16601145	+	2.64946	NA	intron (NM_026162, intron 4 of 13)	intron (NM_026162, intron 4 of 13)	244741	NM_026162	67448	Mm.313938	NM_026162	ENSMUSG00000026748	Plxdc2	1200007L24Rik|5430431D22Rik|AI646728|AU022916|AV231634|Tem7r	plexin domain containing 2	protein-coding	0.010000	0.373134			4(ACATTTTTATGCAAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-460	chr11	38117699	38117899	+	2.64946	NA	Intergenic	Intergenic	402246	NR_040295	100502917	Mm.61144	NR_040295		Gm12130	-	predicted gene 12130	ncRNA	0.015000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-2375	chr5	144725144	144725344	+	2.64946	NA	Intergenic	Intergenic	36334	NM_177735	243339	Mm.126793	NM_177735	ENSMUSG00000043388	Tmem130	BC067004|C130036G08	transmembrane protein 130	protein-coding	0.010000	0.447761			
ePOU_nocontrol_ChIP_peaks_unique-1546	chr19	16513548	16513748	+	2.64946	NA	intron (NM_008137, intron 1 of 6)	Lx8b|LINE|L1	77981	NM_008137	14675	Mm.313181	NM_008137	ENSMUSG00000024697	Gna14	AU023208	guanine nucleotide binding protein, alpha 14	protein-coding	0.015000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-562	chr11	88620263	88620463	+	2.64946	NA	intron (NR_131025, intron 1 of 2)	intron (NR_131025, intron 1 of 2)	1112	NR_131025	68397	Mm.426889	NR_131025		0610039H22Rik	-	RIKEN cDNA 0610039H22 gene	ncRNA	0.015000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-50	chr1	51650078	51650278	+	2.64946	NA	Intergenic	Intergenic	-53460	NR_151621	100045066	Mm.404734	NR_151621		Gm17767	-	predicted gene, 17767	ncRNA	0.005000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-1927	chr3	75712014	75712214	+	2.64946	NA	Intergenic	Intergenic	-56383	NR_040539	69193	Mm.374088	NR_040539	ENSMUSG00000099370	Platr10	2410007B07Rik	pluripotency associated transcript 10	ncRNA	0.010000	0.328358		18(GATGCATATGCAGT,+,0.00),18(GATGCATATGCAGT,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2805	chr8	115707401	115707601	+	2.64946	NA	promoter-TSS (NM_001025577)	promoter-TSS (NM_001025577)	-607	NM_001025577	17132	Mm.275549	NM_001025577	ENSMUSG00000055435	Maf	2810401A20Rik|A230108G15Rik|AW047063|c-maf	avian musculoaponeurotic fibrosarcoma oncogene homolog	protein-coding	0.070000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-671	chr12	36126764	36126964	+	2.64946	NA	intron (NM_025840, intron 3 of 11)	intron (NM_025840, intron 3 of 11)	29961	NM_025840	66912	Mm.288669	NM_025840	ENSMUSG00000020547	Bzw2	1110001I24Rik|Bdm2|HSPC028	basic leucine zipper and W2 domains 2	protein-coding	0.010000	0.427861		71(AATGCATTTGCAAG,-,0.00)	76(ATTTGCAAGGCAGATT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2061	chr4	19662890	19663090	+	2.64946	NA	intron (NM_177327, intron 5 of 24)	intron (NM_177327, intron 5 of 24)	46014	NR_074089	107568	Mm.78312	NM_177327	ENSMUSG00000041058	Wwp1	8030445B08Rik|AIP5|SDRP1|Tiul1	WW domain containing E3 ubiquitin protein ligase 1	protein-coding	0.000000	0.293532			-95(CTATTCTGATTCAAAT,+,0.00),12(ATATACAAAAGAAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2137	chr4	108071394	108071594	+	2.64946	NA	intron (NM_011327, intron 11 of 15)	intron (NM_011327, intron 11 of 15)	-15863	NR_105823	102465213		NR_105823	ENSMUSG00000098980	Mir6397	Gm28004|mmu-mir-6397	microRNA 6397	ncRNA	0.095000	0.606965			
ePOU_nocontrol_ChIP_peaks_unique-1337	chr17	28232606	28232806	+	2.64946	NA	promoter-TSS (NM_011145)	promoter-TSS (NM_011145)	-48	NM_011145	19015	Mm.328914	NM_011145	ENSMUSG00000002250	Ppard	NUC-1|NUC1|Nr1c2|PPAR-beta|PPAR-delta|PPAR[b]|PPARdelta|Pparb|Pparb/d	peroxisome proliferator activator receptor delta	protein-coding	0.100000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-1688	chr2	59132406	59132606	+	2.64946	NA	intron (NM_001001178, intron 1 of 14)	RLTR13B4|LTR|ERVK	28177	NM_001362394	227933	Mm.330234	NM_177650	ENSMUSG00000036641	Ccdc148	5830402J09|Gm38473	coiled-coil domain containing 148	protein-coding	0.010000	0.437811	-27(ATTGCATTATTCATG,+,0.00),-27(ATTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-215	chr1	182854862	182855062	+	2.64946	NA	intron (NM_144796, intron 3 of 7)	intron (NM_144796, intron 3 of 7)	90066	NM_001356463	96935	Mm.331052	NM_144796	ENSMUSG00000038576	Susd4	AI848994|E430021N18Rik|N28096	sushi domain containing 4	protein-coding	0.005000	0.398010	-43(AATGCATAATTCATA,+,0.00),-43(AATGCATAATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-201	chr1	176814037	176814237	+	2.64946	NA	promoter-TSS (NM_001357390)	promoter-TSS (NM_001357390)	-184	NM_001368872	545389	Mm.269991	NM_001024722	ENSMUSG00000057335	Cep170	4933426L22Rik|A330004A13Rik|AI195353	centrosomal protein 170	protein-coding	0.075000	0.651741			
ePOU_nocontrol_ChIP_peaks_unique-996	chr14	67715657	67715857	+	2.64946	NA	promoter-TSS (NM_175384)	promoter-TSS (NM_175384)	84	NM_175384	108912	Mm.33831	NM_175384	ENSMUSG00000048922	Cdca2	2610311M19Rik|AI586158	cell division cycle associated 2	protein-coding	0.055000	0.517413			
ePOU_nocontrol_ChIP_peaks_unique-670	chr12	35760700	35760900	+	2.64946	NA	Intergenic	Intergenic	-65682	NR_045050	71581	Mm.100110	NR_045050	ENSMUSG00000113985	9130015A21Rik	100043575|Gm4527	RIKEN cDNA 9130015A21 gene	ncRNA	0.010000	0.363184	-20(CATGAATAATTCATG,+,0.00),-20(CATGAATAATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1339	chr17	28756654	28756854	+	2.64946	NA	Intergenic	Intergenic	-12563	NM_011950	26415	Mm.27970	NM_011950	ENSMUSG00000004864	Mapk13	SAPK4|Serk4	mitogen-activated protein kinase 13	protein-coding	0.010000	0.497512			
ePOU_nocontrol_ChIP_peaks_unique-1936	chr3	82719943	82720143	+	2.64946	NA	Intergenic	Intergenic	156440	NM_001146328	633285	Mm.265114	NM_001146328	ENSMUSG00000033882	Rbm46	EG633285|Gm761	RNA binding motif protein 46	protein-coding	0.005000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-1365	chr17	49467453	49467653	+	2.64946	NA	intron (NM_001008231, intron 20 of 25)	intron (NM_001008231, intron 20 of 25)	39189	NM_028464	56738	Mm.22256	NM_020042	ENSMUSG00000064120	Mocs1	3110045D15Rik|AI043170|AW536397	molybdenum cofactor synthesis 1	protein-coding	0.015000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-1344	chr17	30166885	30167085	+	2.64946	NA	intron (NM_001356265, intron 4 of 5)	intron (NM_001356265, intron 4 of 5)	161946	NM_148926	21769	Mm.220972	NM_148926	ENSMUSG00000044477	Zfand3	AW539211|TEG-27|Tex27	zinc finger, AN1-type domain 3	protein-coding	0.000000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-1696	chr2	64098019	64098219	+	2.64946	NA	promoter-TSS (NM_021716)	promoter-TSS (NM_021716)	-81	NM_021716	60344	Mm.130769	NM_021716	ENSMUSG00000075324	Fign	Fgn|fi|fidget	fidgetin	protein-coding	0.105000	0.656716			
ePOU_nocontrol_ChIP_peaks_unique-250	chr10	10101749	10101949	+	2.64946	NA	Intergenic	L3|LINE|CR1	-200809	NM_001081344	78808	Mm.331751	NM_030191	ENSMUSG00000019790	Stxbp5	0710001E20Rik|4930565N16Rik|AW742610|LGL3|mKIAA1006	syntaxin binding protein 5 (tomosyn)	protein-coding	0.010000	0.343284	-34(TATGAATAATGCATA,+,0.00),-34(TATGAATAATGCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-297	chr10	39157507	39157707	+	2.64946	NA	intron (NM_001127376, intron 2 of 4)	intron (NM_001127376, intron 2 of 4)	6187	NM_001127376	327743	Mm.208111	NM_001127376	ENSMUSG00000062074	Ccn6	Gm735|WISP-3|Wisp3	cellular communication network factor 6	protein-coding	0.000000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-2948	chr9	110476517	110476717	+	2.64946	NA	promoter-TSS (NM_001163569)	promoter-TSS (NM_001163569)	77	NM_001360306	270201	Mm.41744	NM_177771	ENSMUSG00000054792	Klhl18	A930041K15|AW545966	kelch-like 18	protein-coding	0.095000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-317	chr10	53459885	53460085	+	2.64946	NA	Intergenic	Intergenic	50103	NR_152767	102640074	Mm.412957	NR_152767		Gm36229	-	predicted gene, 36229	ncRNA	0.005000	0.402985			-1(ATCAAAATAACAAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2441	chr6	56797398	56797598	+	2.64946	NA	promoter-TSS (NM_001362212)	promoter-TSS (NM_001362212)	-285	NM_001362211	210973	Mm.57295	NM_145958	ENSMUSG00000059486	Kbtbd2	BC022962|Bklhd1|mKIAA1489	kelch repeat and BTB (POZ) domain containing 2	protein-coding	0.180000	0.825871			
ePOU_nocontrol_ChIP_peaks_unique-1974	chr3	104511714	104511914	+	2.64946	NA	5' UTR (NM_001310698, exon 1 of 18)	5' UTR (NM_001310698, exon 1 of 18)	104	NM_001025067	269473	Mm.34855	NM_001025067	ENSMUSG00000032913	Lrig2	4632419I10Rik|BB096938|LIG-2	leucine-rich repeats and immunoglobulin-like domains 2	protein-coding	0.110000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-771	chr12	112588446	112588646	+	2.64946	NA	promoter-TSS (NM_198411)	promoter-TSS (NM_198411)	-238	NM_198411	70435	Mm.250193	NM_198411	ENSMUSG00000037679	Inf2	2610204M08Rik|AA589465|AW125550|EG629699	inverted formin, FH2 and WH2 domain containing	protein-coding	0.040000	0.601990			
ePOU_nocontrol_ChIP_peaks_unique-2937	chr9	104063218	104063418	+	2.64946	NA	promoter-TSS (NM_175324)	promoter-TSS (NM_175324)	-197	NM_025692	66663	Mm.224935	NM_025692	ENSMUSG00000032557	Uba5	5730525G14Rik|AW240750|Ube1dc1	ubiquitin-like modifier activating enzyme 5	protein-coding	0.040000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-2365	chr5	139940390	139940590	+	2.64946	NA	intron (NM_175522, intron 1 of 1)	intron (NM_175522, intron 1 of 1)	32547	NM_175522	243312	Mm.237102	NM_175522	ENSMUSG00000048988	Elfn1	A930017N06Rik|AI197272|Ppp1r28	leucine rich repeat and fibronectin type III, extracellular 1	protein-coding	0.005000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-241	chr10	3972733	3972933	+	2.64946	NA	promoter-TSS (NM_001170785)	promoter-TSS (NM_001170785)	-242	NM_001170786	270685	Mm.184752	NM_172308	ENSMUSG00000040675	Mthfd1l	2410004L15Rik|AI647056|Fthfsdc1	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	protein-coding	0.015000	0.447761			-52(ATTTGCATTGCAAACT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-371	chr10	94549601	94549801	+	2.64946	NA	intron (NM_172051, intron 1 of 3)	intron (NM_172051, intron 1 of 3)	-1171	NM_001359761	319880	Mm.23047	NM_172051	ENSMUSG00000020023	Tmcc3	A230066D03Rik|AW488095|C630016B22Rik|C88213|Gm1556|Tmcc1	transmembrane and coiled coil domains 3	protein-coding	0.000000	0.457711			-44(GATTTGCTATGCTAAT,+,0.00),-12(GATTTGCTATGCTAAT,+,0.00),20(GATTTGCTATGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-438	chr11	22461100	22461300	+	2.64946	NA	Intergenic	RLTR13B3|LTR|ERVK	-51083	NM_153596	103765	Mm.221274	NM_153596	ENSMUSG00000049904	Tmem17	AI503894|AW049890	transmembrane protein 17	protein-coding	0.020000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-807	chr13	25974468	25974668	+	2.64946	NA	Intergenic	L1_Rod|LINE|L1	-8252	NR_045062	100503530	Mm.86763	NR_045062	ENSMUSG00000086531	Gm11351	-	predicted gene 11351	ncRNA	0.010000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-1700	chr2	69863836	69864036	+	2.64946	NA	intron (NR_149321, intron 2 of 10)	intron (NR_149321, intron 2 of 10)	2374	NM_009278	20823	Mm.10508	NM_009278	ENSMUSG00000068882	Ssb	SS-B	Sjogren syndrome antigen B	protein-coding	0.000000	0.323383			
ePOU_nocontrol_ChIP_peaks_unique-656	chr12	27337806	27338006	+	2.64946	NA	3' UTR (NM_009234, exon 1 of 1)	3' UTR (NM_009234, exon 1 of 1)	4812	NM_009234	20666	Mm.41702	NM_009234	ENSMUSG00000063632	Sox11	1110038H03Rik|6230403H02Rik|AI836553|end1	SRY (sex determining region Y)-box 11	protein-coding	0.000000	0.353234		-25(CATGCATATTTAAA,+,0.00),-25(CATGCATATTTAAA,-,0.00)	2(ATTAACATTAAAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1675	chr2	46640404	46640604	+	2.64946	NA	Intergenic	L1M5|LINE|L1	943899	NR_040497	69405	Mm.396184	NR_040497	ENSMUSG00000086202	1700019E08Rik	-	RIKEN cDNA 1700019E08 gene	ncRNA	0.000000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-2529	chr6	137262188	137262388	+	2.64946	NA	intron (NM_001164401, intron 1 of 25)	intron (NM_001164401, intron 1 of 25)	9989	NM_011216	19277	Mm.186361	NM_011216	ENSMUSG00000030223	Ptpro	D28|GLEPP1|PTPBK|PTPROt|PTPU2|PTPoc|PTPphi|Ptpn15|R-PTP-O	protein tyrosine phosphatase, receptor type, O	protein-coding	0.005000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-776	chr12	118301479	118301679	+	2.64946	NA	promoter-TSS (NM_001166385)	promoter-TSS (NM_001166385)	-139	NM_009239	20688	Mm.34699	NM_009239	ENSMUSG00000025323	Sp4	5730497N03Rik|HF-1b|HF1-b	trans-acting transcription factor 4	protein-coding	0.130000	0.791045			
ePOU_nocontrol_ChIP_peaks_unique-989	chr14	64893156	64893356	+	2.64946	NA	intron (NM_177338, intron 3 of 9)	intron (NM_177338, intron 3 of 9)	56601	NM_001347627	219150	Mm.344074	NM_177338	ENSMUSG00000021972	Hmbox1	AI451877|AI604847|F830020C16Rik	homeobox containing 1	protein-coding	0.005000	0.358209		2(CATTCCTATGCATA,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1483	chr18	64619383	64619583	+	2.64946	NA	intron (NM_001001488, intron 1 of 27)	intron (NM_001001488, intron 1 of 27)	41517	NM_001001488	54670	Mm.270043	NM_001001488	ENSMUSG00000039529	Atp8b1	AI451886|FIC1|Ic	ATPase, class I, type 8B, member 1	protein-coding	0.005000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-703	chr12	73229155	73229355	+	2.64946	NA	intron (NM_008612, intron 7 of 7)	L1ME1|LINE|L1	57456	NM_029580	76357	Mm.311344	NM_029580	ENSMUSG00000034442	Trmt5	2610027O18Rik|mKIAA1393	TRM5 tRNA methyltransferase 5	protein-coding	0.000000	0.358209			-55(AGTTTGTATTGCAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1994	chr3	119376334	119376534	+	2.64946	NA	intron (NM_170778, intron 20 of 22)	intron (NM_170778, intron 20 of 22)	406954	NM_019550	56195	Mm.29966	NM_019550	ENSMUSG00000028134	Ptbp2	Ptb2|brPTB|nPTB	polypyrimidine tract binding protein 2	protein-coding	0.005000	0.363184			8(ATTTGGATAAGAAAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-472	chr11	44994247	44994447	+	2.64946	NA	intron (NM_001362579, intron 15 of 16)	intron (NM_001362579, intron 15 of 16)	122581	NR_045100	100504255	Mm.123608	NR_045100	ENSMUSG00000084773	Gm12159	-	predicted gene 12159	ncRNA	0.020000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-2982	chrX	52348878	52349078	+	2.64946	NA	intron (NM_016697, intron 6 of 7)	intron (NM_016697, intron 6 of 7)	29203	NR_105805	102465202		NR_105805	ENSMUSG00000105738	Mir6384	mmu-mir-6384	microRNA 6384	ncRNA	0.015000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-2189	chr4	156197795	156197995	+	2.64946	NA	promoter-TSS (NM_001369027)	promoter-TSS (NM_001369027)	-407	NM_021604	11603	Mm.273098	NM_021604	ENSMUSG00000041936	Agrn	Agrin|nmf380	agrin	protein-coding	0.085000	0.671642			
ePOU_nocontrol_ChIP_peaks_unique-935	chr14	23692943	23693143	+	2.64946	NA	intron (NM_001253374, intron 1 of 28)	intron (NM_001253374, intron 1 of 28)	311162	NM_001253361	16531	Mm.343607	NM_010610	ENSMUSG00000063142	Kcnma1	5730414M22Rik|BKCa|MaxiK|Slo|Slo1|mSlo|mSlo1	potassium large conductance calcium-activated channel, subfamily M, alpha member 1	protein-coding	0.000000	0.378109			-43(CATTTGTTTTTAAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-118	chr1	104797712	104797912	+	2.64946	NA	intron (NM_011800, intron 1 of 11)	intron (NM_011800, intron 1 of 11)	29292	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding	0.005000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-1068	chr15	19191855	19192055	+	2.64946	NA	intron (NR_155419, intron 2 of 2)	intron (NR_155419, intron 2 of 2)	6582	NR_155419	102639102	Mm.463245	NR_155419	ENSMUSG00000115803	Gm35496	-	predicted gene, 35496	ncRNA	0.000000	0.383085			8(ACATAGCTATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2366	chr5	140321573	140321773	+	2.64946	NA	promoter-TSS (NM_001356585)	promoter-TSS (NM_001356585)	51	NM_001356585	17766	Mm.118846	NM_008637	ENSMUSG00000036639	Nudt1	Mth1	nudix (nucleoside diphosphate linked moiety X)-type motif 1	protein-coding	0.105000	0.626866			
ePOU_nocontrol_ChIP_peaks_unique-2163	chr4	134511200	134511400	+	2.64946	NA	intron (NM_001081099, intron 1 of 2)	intron (NM_001081099, intron 1 of 2)	301	NM_001081099	69885	Mm.141592	NM_001081099	ENSMUSG00000078521	Aunip	2610002D18Rik|Clhc1	aurora kinase A and ninein interacting protein	protein-coding	0.055000	0.616915			
ePOU_nocontrol_ChIP_peaks_unique-523	chr11	70682119	70682319	+	2.64946	NA	intron (NM_001364103, intron 7 of 21)	intron (NM_001364103, intron 7 of 21)	5311	NM_001364103	216874	Mm.473726	NM_178116	ENSMUSG00000040712	Camta2	Kiaa0909-hp|mKIAA0909	calmodulin binding transcription activator 2	protein-coding	0.010000	0.532338			
ePOU_nocontrol_ChIP_peaks_unique-1326	chr17	24550154	24550354	+	2.64946	NA	5' UTR (NM_013630, exon 1 of 46)	5' UTR (NM_013630, exon 1 of 46)	304	NM_013630	18763	Mm.30435	NM_013630	ENSMUSG00000032855	Pkd1	PC1|mFLJ00285	polycystin 1, transient receptor poteintial channel interacting	protein-coding	0.125000	0.771144			
ePOU_nocontrol_ChIP_peaks_unique-1481	chr18	62972971	62973171	+	2.64946	NA	Intergenic	Intergenic	-4845	NM_028017	108123	Mm.292687	NM_028017	ENSMUSG00000024581	Napg	2400003O04Rik|SNARE	N-ethylmaleimide sensitive fusion protein attachment protein gamma	protein-coding	0.015000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-1550	chr19	21106292	21106492	+	2.64946	NA	TTS (NR_126458)	TTS (NR_126458)	1682	NR_126458	75354	Mm.243873	NR_126458	ENSMUSG00000118047	4930554I06Rik	-	RIKEN cDNA 4930554I06 gene	ncRNA	0.020000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-2396	chr6	21147504	21147704	+	2.64946	NA	Intergenic	Intergenic	-67742	NM_019697	16508	Mm.425316	NM_019697	ENSMUSG00000060882	Kcnd2	AI839615|AW555701|Kv4.2|R75121	potassium voltage-gated channel, Shal-related family, member 2	protein-coding	0.000000	0.243781			
ePOU_nocontrol_ChIP_peaks_unique-486	chr11	53965932	53966132	+	2.64946	NA	intron (NM_001362202, intron 1 of 8)	RLTR13B3|LTR|ERVK	14301	NM_019723	56517	Mm.154284	NM_019723	ENSMUSG00000063652	Slc22a21	Octn3|Slc22a9	solute carrier family 22 (organic cation transporter), member 21	protein-coding	0.010000	0.417910	-25(ATTGCATTATTCATG,+,0.00),-25(ATTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2398	chr6	22708919	22709119	+	2.64946	NA	Intergenic	Intergenic	-166483	NM_001081306	19283	Mm.41639	NM_011219	ENSMUSG00000068748	Ptprz1	AI850339|DSD-1-PG|PTPbeta|PTPzeta|Ptprz|Ptpz|R-PTP-zeta|RPTPz|Rptpbeta	protein tyrosine phosphatase, receptor type Z, polypeptide 1	protein-coding	0.010000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-2979	chrX	50449334	50449534	+	2.64946	NA	Intergenic	Lx6|LINE|L1	-22940	NM_146292	258289	Mm.451653	NM_146292	ENSMUSG00000048173	Olfr1324	MOR128-2	olfactory receptor 1324	protein-coding	0.000000	0.318408	-28(AATGAATTATGTAAC,-,0.00)		-72(CTTCTATCTTTCAAAT,+,0.00),24(TCTTTGTTATGTATAC,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2627	chr7	96369529	96369729	+	2.64946	NA	intron (NM_001310760, intron 2 of 32)	L1M4|LINE|L1	-27665	NR_046043	670727	Mm.421352	NR_046043	ENSMUSG00000085751	Gm15412	-	predicted gene 15412	ncRNA	0.000000	0.398010			-6(CCTTTGTTGTGTTAAT,+,0.00),33(TTTTGCATGAGAAACC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2890	chr9	61980156	61980356	+	2.64946	NA	intron (NM_028748, intron 2 of 7)	(CATATA)n|Simple_repeat|Simple_repeat	-33457	NM_024245	71819	Mm.259374	NM_024245	ENSMUSG00000032254	Kif23	3110001D19Rik|C87313|CHO1|Knsl5|MKLP-1|MKLP1	kinesin family member 23	protein-coding	0.000000	0.298507		-29(GATACATATACATA,-,0.00),-23(TATACATATACATA,-,0.00),-17(TATACATATACATA,-,0.00),-11(TATACATATACATA,-,0.00),-5(TATACATATACATA,-,0.00),1(TATACATATACATA,-,0.00),7(TATACATATACATA,-,0.00),13(TATACATATGCATA,+,0.00),13(TATACATATGCATA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1699	chr2	67174066	67174266	+	2.64946	NA	intron (NM_001033477, intron 1 of 1)	intron (NM_001033477, intron 1 of 1)	332	NM_001033477	383709	Mm.244520	NM_001033477		Gm1322	-	predicted gene 1322	protein-coding	0.000000	0.343284	17(CATGAATTATGCATG,+,0.00),17(CATGAATTATGCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1462	chr18	52569784	52569984	+	2.64946	NA	Intergenic	Intergenic	-40017	NM_001286182	16948	Mm.172	NM_010728	ENSMUSG00000024529	Lox	AI893619|TSC-160|rrg	lysyl oxidase	protein-coding	0.010000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-804	chr13	25118226	25118426	+	2.64946	NA	intron (NM_001195617, intron 6 of 7)	intron (NM_001195617, intron 6 of 7)	62322	NM_177577	195208	Mm.284719	NM_177577	ENSMUSG00000035910	Dcdc2a	AW492955|Dcdc2|RU2	doublecortin domain containing 2a	protein-coding	0.000000	0.283582	-3(TATGCATAATTCATT,+,0.00),-3(TATGCATAATTCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-968	chr14	54253980	54254180	+	2.64946	NA	promoter-TSS (NM_001205181)	promoter-TSS (NM_001205181)	-49	NM_001205181	105501	Mm.28771	NM_134076	ENSMUSG00000040997	Abhd4	1110035H23Rik|AI429574|Abh4	abhydrolase domain containing 4	protein-coding	0.060000	0.527363			
ePOU_nocontrol_ChIP_peaks_unique-2411	chr6	34187688	34187888	+	2.64946	NA	Intergenic	ORR1D1-int|LTR|ERVL-MaLR	-10734	NM_021435	58246	Mm.245527	NM_021435	ENSMUSG00000018999	Slc35b4	4930474D06Rik|AB041549|AW494345	solute carrier family 35, member B4	protein-coding	0.005000	0.437811			-63(CCTTTCTTATTTAAAC,+,0.00),-7(ATATTATCATGCAAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1767	chr2	127587335	127587535	+	2.64946	NA	promoter-TSS (NM_029963)	promoter-TSS (NM_029963)	9	NM_029963	77721	Mm.274601	NM_029963	ENSMUSG00000027374	Mrps5	1620401I16Rik|AI850294	mitochondrial ribosomal protein S5	protein-coding	0.105000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-667	chr12	34243440	34243640	+	2.64946	NA	intron (NM_001271386, intron 19 of 27)	intron (NM_001271386, intron 19 of 27)	285349	NM_024124	79221	Mm.310551	NM_024124	ENSMUSG00000004698	Hdac9	AV022454|D030072B18Rik|HD7B|HD9|HDRP|Hdac7b|Mitr|mKIAA0744	histone deacetylase 9	protein-coding	0.000000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-2248	chr5	52566366	52566566	+	2.64946	NA	promoter-TSS (NM_144945)	promoter-TSS (NM_144945)	-160	NM_144945	246316	Mm.44721	NM_144945	ENSMUSG00000039252	Lgi2	mKIAA1916	leucine-rich repeat LGI family, member 2	protein-coding	0.060000	0.661692	-63(AATGAATAATGCACG,+,0.00),-63(AATGAATAATGCACG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1248	chr16	48450392	48450592	+	2.64946	NA	intron (NM_010816, intron 6 of 26)	intron (NM_010816, intron 6 of 26)	19255	NM_010816	17450	Mm.250060	NM_010816	ENSMUSG00000022652	Morc1	Morc	microrchidia 1	protein-coding	0.005000	0.323383			
ePOU_nocontrol_ChIP_peaks_unique-2566	chr7	30551657	30551857	+	2.64946	NA	promoter-TSS (NR_157095)	promoter-TSS (NR_157095)	515	NM_183321	333193	Mm.34885	NM_183321	ENSMUSG00000036864	Proser3	-	proline and serine rich 3	protein-coding	0.025000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-1947	chr3	86845057	86845257	+	2.64946	NA	intron (NM_001357460, intron 2 of 16)	intron (NM_001357460, intron 2 of 16)	75727	NM_001195497	70762	Mm.44490	NM_027539	ENSMUSG00000028078	Dclk2	6330415M09Rik|AU044875|CL2|CLICK2|Click-II|Dcamkl2	doublecortin-like kinase 2	protein-coding	0.020000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-2243	chr5	48049110	48049310	+	2.64946	NA	intron (NR_111900, intron 4 of 35)	intron (NR_111900, intron 4 of 35)	66055	NR_111900	20563	Mm.289739	NM_178804	ENSMUSG00000031558	Slit2	Drad-1|E030015M03Rik|E130320P19Rik|Slil3|b2b1200.1Clo|mKIAA4141|slit-2	slit guidance ligand 2	protein-coding	0.005000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-919	chr14	9319407	9319607	+	2.64946	NA	Intergenic	Intergenic	-564588	NR_030680	100042415	Mm.235938	NR_030680	ENSMUSG00000089686	Mnd1-ps	Gm3833	Mnd1 retrotransposed pseudogene	pseudo	0.000000	0.333333	61(AATGAAATATGCATA,+,0.00),61(AATGAAATATGCATA,-,0.00)		-53(ATTTGAAGAACAAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2277	chr5	77806956	77807156	+	2.64946	NA	Intergenic	Intergenic	341568	NR_131050	69370	Mm.426881	NR_131050	ENSMUSG00000107232	1700017L05Rik	-	RIKEN cDNA 1700017L05 gene	ncRNA	0.005000	0.358209	-68(CATGAATAATTCAGT,+,0.00),-68(CATGAATAATTCAGT,-,0.00)		-33(ATTTGCATGTAAAGGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-756	chr12	100202124	100202324	+	2.64946	NA	intron (NM_001313934, intron 1 of 5)	intron (NM_001313934, intron 1 of 5)	2080	NM_001313934	12313	Mm.285993	NM_009790	ENSMUSG00000001175	Calm1	AI256814|AI327027|AI461935|AL024000|CaM|Calm|Cam1	calmodulin 1	protein-coding	0.015000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-2146	chr4	119223914	119224114	+	2.64946	NA	Intergenic	Intergenic	-5797	NM_029198	75180	Mm.179335	NM_029198	ENSMUSG00000028642	Tmem269	4930538K18Rik	transmembrane protein 269	protein-coding	0.005000	0.447761			
ePOU_nocontrol_ChIP_peaks_unique-18	chr1	20923372	20923572	+	2.64946	NA	intron (NM_001355122, intron 1 of 2)	intron (NM_001355122, intron 1 of 2)	5632	NM_001355122	74229	Mm.40780	NM_028829	ENSMUSG00000025931	Paqr8	1700019B16Rik|3110001D06Rik	progestin and adipoQ receptor family member VIII	protein-coding	0.010000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-2035	chr3	154596993	154597193	+	2.64946	NA	promoter-TSS (NM_001357674)	promoter-TSS (NM_001357674)	5	NM_001168358	209584	Mm.347513	NM_172474	ENSMUSG00000047583	Tyw3	5230400J09Rik	tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)	protein-coding	0.105000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-326	chr10	62590381	62590581	+	2.64946	NA	intron (NM_019553, intron 7 of 14)	intron (NM_019553, intron 7 of 14)	11817	NM_019553	56200	Mm.413275	NM_019553	ENSMUSG00000020075	Ddx21	AI255159|AL022742|D10Ertd645e|D10Wsu42e	DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	protein-coding	0.010000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-2390	chr6	16334628	16334828	+	2.64946	NA	Intergenic	Intergenic	-442796	NR_157239	102640655		NR_157239	ENSMUSG00000107022	Gm36669	-	predicted gene, 36669	ncRNA	0.005000	0.278607			9(ATTTTATGATGGAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2	chr1	5083144	5083344	+	2.64946	NA	5' UTR (NM_001310442, exon 1 of 13)	5' UTR (NM_001310442, exon 1 of 13)	158	NM_001310442	108664	Mm.27082	NM_133826	ENSMUSG00000033793	Atp6v1h	0710001F19Rik|AU022349|CGI-11|SFD|SFDalpha|SFDbeta|VMA13	ATPase, H+ transporting, lysosomal V1 subunit H	protein-coding	0.105000	0.716418			
ePOU_nocontrol_ChIP_peaks_unique-2221	chr5	31193006	31193206	+	2.64946	NA	promoter-TSS (NM_153680)	promoter-TSS (NM_153680)	33	NM_001127356	13667	Mm.29394	NM_010122	ENSMUSG00000029145	Eif2b4	Eif2b	eukaryotic translation initiation factor 2B, subunit 4 delta	protein-coding	0.070000	0.656716			
ePOU_nocontrol_ChIP_peaks_unique-1885	chr3	52196648	52196848	+	2.64946	NA	Intergenic	Intergenic	-71589	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding	0.015000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-886	chr13	97927910	97928110	+	2.64946	NA	intron (NM_012026, intron 35 of 35)	intron (NM_012026, intron 35 of 35)	176898	NR_152263	111365222	Mm.440079	NR_152263		Eyelinc18	-	uncharacterized EyeLinc18	ncRNA	0.030000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-1267	chr16	72261725	72261925	+	2.64946	NA	Intergenic	Intergenic	-27498	NR_131115	319533	Mm.373754	NR_131115	ENSMUSG00000116769	8030451O07Rik	-	RIKEN cDNA 8030451O07 gene	ncRNA	0.020000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-168	chr1	156615331	156615531	+	2.64946	NA	intron (NM_009595, intron 1 of 11)	intron (NM_009595, intron 1 of 11)	56644	NM_009595	11352	Mm.329515	NM_009595	ENSMUSG00000026596	Abl2	AA536808|Abll|Arg	v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)	protein-coding	0.015000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-1942	chr3	84450840	84451040	+	2.64946	NA	intron (NM_001033301, intron 10 of 11)	intron (NM_001033301, intron 10 of 11)	28551	NM_001205355	229474	Mm.331107	NM_001033301	ENSMUSG00000041842	Fhdc1	6330505N24Rik|Gm126	FH2 domain containing 1	protein-coding	0.005000	0.467662			
Oct4_nocontrol_ChIP_peaks_unique-37	chr15	89196462	89196662	+	2.64946	NA	promoter-TSS (NM_027081)	promoter-TSS (NM_027081)	-88	NM_027081	69440	Mm.482128	NM_027081	ENSMUSG00000015377	Dennd6b	1700027J05Rik|AI414881|Fam116b	DENN/MADD domain containing 6B	protein-coding	0.095000	0.661692			
ePOU_nocontrol_ChIP_peaks_unique-1966	chr3	100579144	100579344	+	2.64946	NA	intron (NM_010763, intron 11 of 12)	RLTR13B1|LTR|ERVK	-90052	NM_001142952	74645	Mm.226900	NM_001142952	ENSMUSG00000044468	Tent5c	4930431B09Rik|AI449797|Fam46c	terminal nucleotidyltransferase 5C	protein-coding	0.000000	0.417910	-9(ATTGCATTATTCATG,+,0.00),-9(ATTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1523	chr19	5688787	5688987	+	2.64946	NA	promoter-TSS (NM_022012)	promoter-TSS (NM_022012)	21	NM_144868	104401	Mm.329650	NM_144868	ENSMUSG00000054874	Pcnx3	Pcnxl3|mKIAA4073	pecanex homolog 3	protein-coding	0.075000	0.572139			
ePOU_nocontrol_ChIP_peaks_unique-1133	chr15	76198745	76198945	+	2.64946	NA	promoter-TSS (NM_201393)	promoter-TSS (NM_201393)	561	NM_201392	18810	Mm.234912	NM_011117	ENSMUSG00000022565	Plec	AA591047|AU042537|EBS1|PCN|PLTN|Plec1	plectin	protein-coding	0.045000	0.636816			
ePOU_nocontrol_ChIP_peaks_unique-1551	chr19	21495439	21495639	+	2.64946	NA	Intergenic	Intergenic	-22878	NM_010266	14544	Mm.45054	NM_010266	ENSMUSG00000058624	Gda	AU015411|AW047581|GAH	guanine deaminase	protein-coding	0.010000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-2160	chr4	131962213	131962413	+	2.64946	NA	intron (NM_001128607, intron 12 of 17)	B2_Mm2|SINE|B2	40542	NM_001201367	623230	Mm.421179	NM_001201367	ENSMUSG00000070720	Tmem200b	EG623230	transmembrane protein 200B	protein-coding	0.000000	0.328358			
ePOU_nocontrol_ChIP_peaks_unique-1854	chr3	20614730	20614930	+	2.64946	NA	Intergenic	RLTR13B4|LTR|ERVK	-247653	NM_175086	11608	Mm.134863	NM_175086	ENSMUSG00000054988	Agtr1b	AT1B|AT2R1B|Agtr-1b|Angtr-1b	angiotensin II receptor, type 1b	protein-coding	0.005000	0.402985	-6(ATTGCATTATTCATG,+,0.00),-6(ATTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-546	chr11	85392564	85392764	+	2.64946	NA	intron (NM_138681, intron 6 of 25)	intron (NM_138681, intron 6 of 25)	39500	NM_138681	192197	Mm.209989	NM_138681	ENSMUSG00000059439	Bcas3	1500019F07Rik|2610028P08Rik|AU021018|BC028339|K20D4|rudhira	breast carcinoma amplified sequence 3	protein-coding	0.020000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-2757	chr8	71968242	71968442	+	2.64946	NA	exon (NM_001164581, exon 4 of 4)	exon (NM_001164581, exon 4 of 4)	17276	NM_001164581	234413	Mm.334607	NM_001164581	ENSMUSG00000052446	Zfp961	A230105L22Rik|BC065788|mszf37|mszf55-2	zinc finger protein 961	protein-coding	0.015000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-1432	chr18	22488963	22489163	+	2.64946	NA	intron (NM_001167777, intron 9 of 12)	intron (NM_001167777, intron 9 of 12)	143974	NM_001167777	211961	Mm.392310	NM_001167777	ENSMUSG00000045215	Asxl3	C230079D11Rik|D430002O22Rik|D930044O18Rik|Gm329|Gm945	additional sex combs like 3, transcriptional regulator	protein-coding	0.010000	0.298507			
Oct4_nocontrol_ChIP_peaks_unique-32	chr14	120477594	120477794	+	2.64946	NA	promoter-TSS (NM_029519)	promoter-TSS (NM_029519)	-767	NM_029519	76108	Mm.261448	NM_029519	ENSMUSG00000051615	Rap2a	5830461H18Rik	RAS related protein 2a	protein-coding	0.045000	0.552239			
ePOU_nocontrol_ChIP_peaks_unique-1940	chr3	84155749	84155949	+	2.64946	NA	promoter-TSS (NM_029797)	promoter-TSS (NM_029797)	-63	NM_029797	76915	Mm.274829	NM_029797	ENSMUSG00000033752	Mnd1	2610034E18Rik|AI591601|Gaj	meiotic nuclear divisions 1	protein-coding	0.050000	0.671642			
ePOU_nocontrol_ChIP_peaks_unique-558	chr11	87471607	87471807	+	2.64946	NA	intron (NM_031386, intron 2 of 30)	L1Md_A|LINE|L1	44116	NM_001199293	83560	Mm.440758	NM_031386	ENSMUSG00000010342	Tex14	C85585	testis expressed gene 14	protein-coding	0.005000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-1458	chr18	44647769	44647969	+	2.64946	NA	intron (NM_001085373, intron 3 of 18)	B4A|SINE|B4	-13796	NR_026853	626275	Mm.427116	NR_026853	ENSMUSG00000097610	A930012L18Rik	-	RIKEN cDNA A930012L18 gene	ncRNA	0.005000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-2563	chr7	28766493	28766693	+	2.64946	NA	promoter-TSS (NM_001122765)	promoter-TSS (NM_001122765)	51	NM_010908	18036	Mm.220333	NM_010908	ENSMUSG00000030595	Nfkbib	I(Kappa)B(beta)|I-kappa-B-beta|IKB-beta|IKappaBbeta|IkB|IkBb|NF-kappa-BIB|ikB-B	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta	protein-coding	0.050000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-2472	chr6	84693209	84693409	+	2.64946	NA	intron (NM_177077, intron 20 of 21)	intron (NM_177077, intron 20 of 21)	-99401	NM_001177713	232174	Mm.255246	NM_175475	ENSMUSG00000063415	Cyp26b1	CP26|P450RAI-2	cytochrome P450, family 26, subfamily b, polypeptide 1	protein-coding	0.010000	0.383085			-69(ATCAGCAATACAAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1135	chr15	76701308	76701508	+	2.64946	NA	promoter-TSS (NM_027122)	promoter-TSS (NM_027122)	-134	NM_027122	69572	Mm.34920	NM_027122	ENSMUSG00000019080	Mfsd3	2310010G13Rik	major facilitator superfamily domain containing 3	protein-coding	0.035000	0.582090			
ePOU_nocontrol_ChIP_peaks_unique-2822	chr8	127535908	127536108	+	2.64946	NA	intron (NM_001363431, intron 22 of 24)	intron (NM_001363431, intron 22 of 24)	236396	NM_001013581	93742	Mm.299254	NM_033620	ENSMUSG00000025812	Pard3	AA960621|AI256638|Asip|D8Ertd580e|Par-3|Par3|Pard-3|Pard3a|Phip	par-3 family cell polarity regulator	protein-coding	0.000000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-2695	chr8	13802008	13802208	+	2.64946	NA	Intergenic	Intergenic	16493	NM_025924	67031	Mm.44858	NM_025924	ENSMUSG00000038398	Upf3a	2600001C03Rik|4930546M19Rik|RENT3A|UPF3	UPF3 regulator of nonsense transcripts homolog A (yeast)	protein-coding	0.010000	0.353234			3(TATTTGCCTTTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2539	chr6	144492334	144492534	+	2.64946	NA	Intergenic	Intergenic	-180434	NR_040519	66760	Mm.233631	NR_040519	ENSMUSG00000085785	Sox5os3	4933425H06Rik	SRY (sex determining region Y)-box 5, opposite strand 3	ncRNA	0.015000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-1429	chr18	16552360	16552560	+	2.64946	NA	Intergenic	L1MA6|LINE|L1	256786	NM_007664	12558	Mm.257437	NM_007664	ENSMUSG00000024304	Cdh2	CDHN|N-CAD|Ncad	cadherin 2	protein-coding	0.010000	0.398010		-100(TCTGCATATTAATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-305	chr10	40831740	40831940	+	2.64946	NA	3' UTR (NM_027879, exon 15 of 15)	3' UTR (NM_027879, exon 15 of 15)	51303	NM_027879	71713	Mm.46063	NM_027879	ENSMUSG00000038446	Cdc40	1200003H23Rik|EHB3|PRP17	cell division cycle 40	protein-coding	0.005000	0.353234			
Oct4_nocontrol_ChIP_peaks_unique-90	chr7	80746500	80746700	+	2.64946	NA	intron (NM_016721, intron 15 of 37)	L1M4|LINE|L1	56731	NM_016721	29875	Mm.207619	NM_016721	ENSMUSG00000030536	Iqgap1	AA682088|D7Ertd237e|D7Ertd257e|mKIAA0051	IQ motif containing GTPase activating protein 1	protein-coding	0.005000	0.507463			11(ATGTACATGACAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-196	chr1	172147906	172148106	+	2.64946	NA	promoter-TSS (NM_153555)	promoter-TSS (NM_153555)	-9	NM_153555	98193	Mm.159915	NM_153555	ENSMUSG00000026554	Dcaf8	AA408877|AA433120|AA792214|AU018973|C76055|D1Dau35e|D1Ucla4|H326|Wdr42a	DDB1 and CUL4 associated factor 8	protein-coding	0.105000	0.656716			
ePOU_nocontrol_ChIP_peaks_unique-1539	chr19	14544063	14544263	+	2.64946	NA	intron (NM_001302950, intron 5 of 18)	intron (NM_001302950, intron 5 of 18)	53050	NM_001302951	21888	Mm.103638	NM_011600	ENSMUSG00000024642	Tle4	5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333|grg-4	transducin-like enhancer of split 4	protein-coding	0.005000	0.452736			0(TCTTTGTTATTCTAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-902	chr13	110280272	110280472	+	2.64946	NA	promoter-TSS (NM_023852)	promoter-TSS (NM_023852)	-166	NM_023852	67295	Mm.151600	NM_023852	ENSMUSG00000021700	Rab3c	2700062I01Rik|3110015B08Rik|3110037E15Rik|AI850886	RAB3C, member RAS oncogene family	protein-coding	0.035000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-2574	chr7	39517732	39517932	+	2.64946	NA	promoter-TSS (NM_001004139)	promoter-TSS (NM_001004139)	66	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding	0.085000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-2932	chr9	95637642	95637842	+	2.64946	NA	5' UTR (NM_029620, exon 1 of 9)	5' UTR (NM_029620, exon 1 of 9)	114	NM_029620	76477	Mm.46016	NM_029620	ENSMUSG00000015354	Pcolce2	2400001O18Rik|Pcpe2	procollagen C-endopeptidase enhancer 2	protein-coding	0.125000	0.746269			
ePOU_nocontrol_ChIP_peaks_unique-574	chr11	96977317	96977517	+	2.64946	NA	intron (NM_001363225, intron 2 of 7)	CpG	271	NM_030220	78912	Mm.491183	NM_030220	ENSMUSG00000018678	Sp2	4930480I16Rik|mKIAA0048	Sp2 transcription factor	protein-coding	0.120000	0.796020			
ePOU_nocontrol_ChIP_peaks_unique-1351	chr17	35241806	35242006	+	2.64946	NA	promoter-TSS (NM_001252457)	promoter-TSS (NM_001252457)	160	NM_019693	53817	Mm.439827	NM_019693	ENSMUSG00000019432	Ddx39b	0610030D10Rik|AI428441|Bat-1|Bat1|Bat1a|D17H6S81E|D17H6S81E-1|D6S81Eh	DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	protein-coding	0.125000	0.706468			
ePOU_nocontrol_ChIP_peaks_unique-672	chr12	36507177	36507377	+	2.64946	NA	intron (NM_001364305, intron 6 of 9)	intron (NM_001364305, intron 6 of 9)	91661	NR_037309	100499526		NR_037309	ENSMUSG00000092917	Mir3472	mmu-mir-3472	microRNA 3472	ncRNA	0.005000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-584	chr11	101732690	101732890	+	2.64946	NA	promoter-TSS (NM_144831)	promoter-TSS (NM_144831)	-166	NM_144831	217207	Mm.28186	NM_144831	ENSMUSG00000034931	Dhx8	Ddx8|mDEAH6|mKIAA4096	DEAH (Asp-Glu-Ala-His) box polypeptide 8	protein-coding	0.080000	0.592040			
ePOU_nocontrol_ChIP_peaks_unique-1371	chr17	56552151	56552351	+	2.64946	NA	intron (NR_130128, intron 3 of 3)	intron (NR_130128, intron 3 of 3)	2136	NR_130128	100504425	Mm.384143	NR_130128	ENSMUSG00000110218	Gm20219	Tincr	predicted gene, 20219	ncRNA	0.015000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-548	chr11	85492467	85492667	+	2.64946	NA	intron (NM_138681, intron 14 of 25)	intron (NM_138681, intron 14 of 25)	139403	NM_138681	192197	Mm.209989	NM_138681	ENSMUSG00000059439	Bcas3	1500019F07Rik|2610028P08Rik|AU021018|BC028339|K20D4|rudhira	breast carcinoma amplified sequence 3	protein-coding	0.025000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-73	chr1	63667752	63667952	+	2.64946	NA	intron (NM_001081658, intron 6 of 14)	intron (NM_001081658, intron 6 of 14)	19075	NM_001081658	241073	Mm.297680	NM_001081658	ENSMUSG00000069085	Dytn	Gm215	dystrotelin	protein-coding	0.005000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-2335	chr5	122391712	122391912	+	2.64946	NA	promoter-TSS (NM_019824)	promoter-TSS (NM_019824)	-66	NM_019824	56378	Mm.275942	NM_019824	ENSMUSG00000029465	Arpc3	1110006A04Rik|p21-ARC|p21-Ar|p21Arc	actin related protein 2/3 complex, subunit 3	protein-coding	0.090000	0.557214	-31(CGTGCTTTATGCATG,+,0.00),-31(CGTGCTTTATGCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2392	chr6	17143436	17143636	+	2.64946	NA	intron (NR_153844, intron 1 of 2)	intron (NR_153844, intron 1 of 2)	28297	NR_153844	232599	Mm.430719	NM_177689		Gm4876	B930018B01|EG232599	predicted gene 4876	ncRNA	0.005000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-720	chr12	78777824	78778024	+	2.64946	NA	intron (NM_019579, intron 1 of 14)	intron (NM_019579, intron 1 of 14)	28977	NM_019579	56217	Mm.425777	NM_019579	ENSMUSG00000021112	Mpp5	3830420B02Rik|AI255216|AI644496|Pals1	membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	protein-coding	0.000000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-847	chr13	60105483	60105683	+	2.64946	NA	intron (NR_046142, intron 1 of 2)	Kanga1b|DNA|TcMar-Tc2	71952	NM_008086	14451	Mm.22701	NM_008086	ENSMUSG00000052957	Gas1	AW554192|Gas-1	growth arrest specific 1	protein-coding	0.020000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-1670	chr2	43226754	43226954	+	2.64946	NA	Intergenic	Intergenic	-328471	NM_001289594	70789	Mm.105278	NM_027552	ENSMUSG00000026866	Kynu	4432411A05Rik	kynureninase	protein-coding	0.000000	0.338308			25(TTTTGAATAAGAATGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1470	chr18	55711772	55711972	+	2.64946	NA	Intergenic	Intergenic	-688468	NM_001360917	107022	Mm.24356	NM_026240	ENSMUSG00000001700	Gramd3	9030613F08Rik|9130427A09Rik|AW061306|Gramd2b|NS3TP2	GRAM domain containing 3	protein-coding	0.015000	0.318408		40(TATGAATATGCATG,+,0.00),40(TATGAATATGCATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1559	chr19	28284195	28284395	+	2.64946	NA	intron (NM_175459, intron 8 of 10)	MER121|DNA|TcMar?	-273129	NM_011265	19726	Mm.313321	NM_011265	ENSMUSG00000040929	Rfx3	C230093O12Rik|MRFX3	regulatory factor X, 3 (influences HLA class II expression)	protein-coding	0.010000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-1996	chr3	119951469	119951669	+	2.64946	NA	Intergenic	Intergenic	-168181	NM_001310711	56195	Mm.29966	NM_019550	ENSMUSG00000028134	Ptbp2	Ptb2|brPTB|nPTB	polypyrimidine tract binding protein 2	protein-coding	0.005000	0.328358			-10(GCTATGTTATGTAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-37	chr1	35162525	35162725	+	2.64946	NA	Intergenic	Intergenic	312636	NM_001357425	226971	Mm.292751	NM_145516	ENSMUSG00000026123	Plekhb2	2310009M15Rik|AU018239|Evt2|Phdc|evt-2	pleckstrin homology domain containing, family B (evectins) member 2	protein-coding	0.000000	0.412935		54(AATCTATATGCATA,+,0.00),64(CATAAATATACATG,+,0.00),64(CATAAATATACATG,-,0.00)	59(ATATGCATAAATATAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-62	chr1	58188698	58188898	+	2.64946	NA	intron (NM_023617, intron 33 of 34)	intron (NM_023617, intron 33 of 34)	-21599	NM_023631	71872	Mm.244525	NM_023631	ENSMUSG00000038242	Aox4	2310003G12Rik|Aoh2	aldehyde oxidase 4	protein-coding	0.005000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-2092	chr4	58454494	58454694	+	2.64946	NA	intron (NM_172989, intron 3 of 3)	intron (NM_172989, intron 3 of 3)	-13496	NR_037278	100526502		NR_037278	ENSMUSG00000093293	Mir3095	mir-3095|mmu-mir-3095	microRNA 3095	ncRNA	0.000000	0.293532	15(TATGAATTATGTATT,+,0.00),15(TATGAATTATGTATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1882	chr3	49784704	49784904	+	2.64946	NA	Intergenic	Intergenic	-27488	NM_130448	73173	Mm.87246	NM_130448	ENSMUSG00000037892	Pcdh18	3110038E07Rik|BB095589|PCDH68L	protocadherin 18	protein-coding	0.000000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-2425	chr6	45988530	45988730	+	2.64946	NA	intron (NM_001004357, intron 4 of 23)	intron (NM_001004357, intron 4 of 23)	928569	NM_001004357	66797	Mm.440084	NM_025771	ENSMUSG00000039419	Cntnap2	5430425M22Rik|Caspr2|mKIAA0868	contactin associated protein-like 2	protein-coding	0.005000	0.318408			
ePOU_nocontrol_ChIP_peaks_unique-2872	chr9	49164979	49165179	+	2.64946	NA	Intergenic	Intergenic	62300	NM_030709	80893	Mm.72799	NM_030709	ENSMUSG00000032268	Tmprss5	spinesin	transmembrane protease, serine 5 (spinesin)	protein-coding	0.005000	0.477612			38(ATTTGCAAACCAAATG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1797	chr2	140244637	140244837	+	2.64946	NA	intron (NM_001033296, intron 15 of 19)	intron (NM_001033296, intron 15 of 19)	74091	NM_027093	69487	Mm.287921	NM_027093	ENSMUSG00000027384	Ndufaf5	2310003L22Rik	NADH:ubiquinone oxidoreductase complex assembly factor 5	protein-coding	0.010000	0.447761	14(CATACATAATTCATT,+,0.00),14(CATACATAATTCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1048	chr14	122181439	122181639	+	2.64946	NA	promoter-TSS (NM_029556)	promoter-TSS (NM_029556)	-155	NM_029556	69634	Mm.34608	NM_029556	ENSMUSG00000025545	Clybl	0610033J05Rik|2310014M14Rik|AI256068|Clb	citrate lyase beta like	protein-coding	0.070000	0.626866			
ePOU_nocontrol_ChIP_peaks_unique-2479	chr6	92500205	92500405	+	2.64946	NA	intron (NM_001081146, intron 2 of 8)	intron (NM_001081146, intron 2 of 8)	-18913	NM_001134460	243548	Mm.248820	NM_001081146	ENSMUSG00000030020	Prickle2	6230400G14Rik|6720451F06Rik|mpk2	prickle planar cell polarity protein 2	protein-coding	0.005000	0.402985			49(TTTTGCAAGCCAAATG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-791	chr13	14953677	14953877	+	2.64946	NA	Intergenic	RLTR13B4|LTR|ERVK	323519	NM_134067	105351	Mm.41450	NM_134067	ENSMUSG00000039182	AW209491	-	expressed sequence AW209491	protein-coding	0.005000	0.393035	5(AATGCATTATTCATG,+,0.00),5(AATGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2919	chr9	87247996	87248196	+	2.64946	NA	intron (NM_199316, intron 3 of 26)	intron (NM_199316, intron 3 of 26)	7436	NM_199316	382090	Mm.335338	NM_199316	ENSMUSG00000056919	Cep162	4922501C03Rik|mKIAA1009	centrosomal protein 162	protein-coding	0.005000	0.308458			
ePOU_nocontrol_ChIP_peaks_unique-987	chr14	64398036	64398236	+	2.64946	NA	intron (NM_001253712, intron 1 of 5)	intron (NM_001253712, intron 1 of 5)	18820	NM_001253716	110265	Mm.26713	NM_026322	ENSMUSG00000054733	Msra	2310045J23Rik|6530413P12Rik|MSR-A	methionine sulfoxide reductase A	protein-coding	0.005000	0.293532	-54(CATGAATTATTCATG,+,0.00),-54(CATGAATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1628	chr2	15009150	15009350	+	2.64946	NA	intron (NM_001165943, intron 9 of 10)	L1MB4|LINE|L1	40062	NM_001165942	74455	Mm.478923	NM_028950	ENSMUSG00000026707	Nsun6	4933403D21Rik|4933414E04Rik|NOPD1	NOL1/NOP2/Sun domain family member 6	protein-coding	0.000000	0.407960	-15(AATAAATATTTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1873	chr3	40532218	40532418	+	2.64946	NA	Intergenic	Intergenic	-8449	NM_175515	380614	Mm.105309	NM_175515	ENSMUSG00000060798	Intu	9230116I04Rik|9430087H23Rik|Pdzd6|Pdzk6|mKIAA1284	inturned planar cell polarity protein	protein-coding	0.040000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-2660	chr7	126482294	126482494	+	2.64946	NA	Intergenic	Intergenic	-4961	NM_001163713	233870	Mm.197829	NM_172745	ENSMUSG00000073838	Tufm	2300002G02Rik|C76308|C76389|EF-TuMT|EFTU	Tu translation elongation factor, mitochondrial	protein-coding	0.015000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-2329	chr5	118703882	118704082	+	2.64946	NA	intron (NM_172424, intron 4 of 30)	intron (NM_172424, intron 4 of 30)	143263	NM_001347445	76199	Mm.206238	NM_172424	ENSMUSG00000018076	Med13l	2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025	mediator complex subunit 13-like	protein-coding	0.020000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-2724	chr8	47245279	47245479	+	2.64946	NA	intron (NM_175162, intron 1 of 4)	L1MC4|LINE|L1	44023	NM_001363119	71069	Mm.23973	NM_175162	ENSMUSG00000038143	Stox2	4933409N07Rik|AI449080|AI835114|mKIAA1392	storkhead box 2	protein-coding	0.010000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-452	chr11	35306907	35307107	+	2.64946	NA	intron (NM_011412, intron 4 of 35)	intron (NM_011412, intron 4 of 35)	185551	NM_011412	20564	Mm.478604	NM_011412	ENSMUSG00000056427	Slit3	Slil2|Slit1|b2b2362.1Clo	slit guidance ligand 3	protein-coding	0.015000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-1681	chr2	51973003	51973203	+	2.64946	NA	5' UTR (NM_019401, exon 1 of 8)	5' UTR (NM_019401, exon 1 of 8)	105	NM_019401	64685	Mm.7491	NM_019401	ENSMUSG00000026946	Nmi	-	N-myc (and STAT) interactor	protein-coding	0.030000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-263	chr10	18647565	18647765	+	2.64946	NA	intron (NM_001033258, intron 11 of 33)	intron (NM_001033258, intron 11 of 33)	-95806	NR_152783	102635639	Mm.470414	NR_152783	ENSMUSG00000111474	Gm32926	-	predicted gene, 32926	ncRNA	0.005000	0.303483			
ePOU_nocontrol_ChIP_peaks_unique-2017	chr3	144154968	144155168	+	2.64946	NA	Intergenic	MER2|DNA|TcMar-Tigger	47264	NM_001161770	16911	Mm.29187	NM_010723	ENSMUSG00000028266	Lmo4	A730077C12Rik|Crp3|Etohi4	LIM domain only 4	protein-coding	0.005000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-2487	chr6	99485595	99485795	+	2.64946	NA	intron (NM_001347345, intron 1 of 19)	intron (NM_001347345, intron 1 of 19)	35298	NM_001347345	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding	0.035000	0.477612			
ePOU_nocontrol_ChIP_peaks_unique-2340	chr5	124482954	124483154	+	2.64946	NA	promoter-TSS (NM_029532)	promoter-TSS (NM_029532)	-101	NM_029532	76167	Mm.156035	NM_029532	ENSMUSG00000029402	Snrnp35	6330548G22Rik	small nuclear ribonucleoprotein 35 (U11/U12)	protein-coding	0.040000	0.348259			-65(TTTTTGTCATGTAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-830	chr13	46713871	46714071	+	2.64946	NA	intron (NM_175749, intron 2 of 21)	intron (NM_175749, intron 2 of 21)	13878	NM_175749	218210	Mm.255398	NM_175749	ENSMUSG00000021374	Nup153	B130015D15Rik|C88147	nucleoporin 153	protein-coding	0.005000	0.333333			
merged_common-202	chr5	143872030	143872230	+	2.64946	NA	intron (NM_013557, intron 1 of 13)	intron (NM_013557, intron 1 of 13)	268	NM_013557	15467	Mm.389709	NM_013557	ENSMUSG00000029613	Eif2ak1	HCR|Hri	eukaryotic translation initiation factor 2 alpha kinase 1	protein-coding	0.000000	0.363184			-28(AATTGCATGAAAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1210	chr16	28511337	28511537	+	2.64473	NA	intron (NM_010199, intron 2 of 5)	intron (NM_010199, intron 2 of 5)	53058	NM_001357064	14167	Mm.7996	NM_010199	ENSMUSG00000022523	Fgf12	AV114868|B230343J05Rik|FGF-12|FHF-1|Fhf1	fibroblast growth factor 12	protein-coding	0.005000	0.432836			
merged_common-120	chr17	57799492	57799692	+	2.64473	NA	intron (NM_001081653, intron 1 of 23)	intron (NM_001081653, intron 1 of 23)	30381	NM_001081653	620292	Mm.391030	NM_001081653	ENSMUSG00000038048	Cntnap5c	Caspr5-3|EG620292|Gm325	contactin associated protein-like 5C	protein-coding	0.005000	0.417910	2(CATGAATAATGCATG,+,0.00),2(CATGAATAATGCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2106	chr4	81351446	81351646	+	2.62331	NA	intron (NM_010820, intron 19 of 46)	intron (NM_010820, intron 19 of 46)	91269	NM_010820	17475	Mm.153039	NM_010820	ENSMUSG00000028402	Mpdz	AI225843|B930003D11Rik|MUPP1	multiple PDZ domain protein	protein-coding	0.010000	0.442786	-2(CATGCATTATTCATG,+,0.00),-2(CATGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1657	chr2	32536653	32536853	+	2.62331	NA	intron (NM_153560, intron 1 of 10)	intron (NM_153560, intron 1 of 10)	1394	NM_153560	98952	Mm.4065	NM_153560	ENSMUSG00000039157	Fam102a	AI426465|C230093N12Rik|Eeig1	family with sequence similarity 102, member A	protein-coding	0.020000	0.527363			-14(GCTTTGCAATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1063	chr15	10980402	10980602	+	2.62331	NA	TTS (NM_001204134)	TTS (NM_001204134)	-1254	NM_008537	17117	Mm.2787	NM_008537	ENSMUSG00000022244	Amacr	Macr1	alpha-methylacyl-CoA racemase	protein-coding	0.005000	0.398010	-57(TATGCATAATTCATA,+,0.00),-57(TATGCATAATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2178	chr4	148742757	148742957	+	2.62331	NA	Intergenic	CpG	-61535	NM_001159344	69743	Mm.233879	NM_027195	ENSMUSG00000028977	Casz1	2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e	castor zinc finger 1	protein-coding	0.145000	0.711443	-6(CATGCATTATTCATC,+,0.00),-6(CATGCATTATTCATC,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-529	chr11	75027760	75027960	+	2.62331	NA	intron (NM_001002764, intron 10 of 18)	B3|SINE|B2	38131	NR_030454	735274		NR_030454	ENSMUSG00000106252	Mir684-1	Mirn684-1	microRNA 684-1	ncRNA	0.010000	0.427861			57(ATTTAAAAAACAAGAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-102	chr1	89035128	89035328	+	2.51556	NA	Intergenic	Zaphod|DNA|hAT-Tip100	19115	NR_040471	73475	Mm.491040	NR_040471	ENSMUSG00000099378	1700067G17Rik	-	RIKEN cDNA 1700067G17 gene	ncRNA	0.015000	0.398010	-19(CATGCATTATTCATA,+,0.00),-19(CATGCATTATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2956	chr9	115805647	115805847	+	2.51556	NA	Intergenic	Intergenic	-103708	NM_028638	73748	Mm.485018	NM_028638	ENSMUSG00000056880	Gadl1	1110027M19Rik|ADC|CSADC	glutamate decarboxylase-like 1	protein-coding	0.005000	0.398010			-35(ATTTCCATAACAATAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2708	chr8	33199326	33199526	+	2.51556	NA	Intergenic	Intergenic	186101	NM_011721	22427	Mm.228805	NM_011721	ENSMUSG00000031583	Wrn	AI846146	Werner syndrome RecQ like helicase	protein-coding	0.010000	0.467662			-8(TTTACCATGACAAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-172	chr1	159413481	159413681	+	2.51556	NA	Intergenic	Intergenic	73223	NR_039543	100628622		NR_039543	ENSMUSG00000105399	Mir1843b	mir-1843b|mmu-mir-1843b	microRNA 1843b	ncRNA	0.015000	0.447761			-17(ATTTGCATAAGGAATC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2005	chr3	127289040	127289240	+	2.51556	NA	intron (NM_001327938, intron 1 of 47)	RMER5|LTR|ERV1	119918	NM_001327939	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	100043364|AI835472|AW491075|Ank-2|Gm4392	ankyrin 2, brain	protein-coding	0.015000	0.378109	10(CATAAATAATGCATT,+,0.00),10(CATAAATAATGCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1507	chr18	84301091	84301291	+	2.51556	NA	intron (NM_001033341, intron 8 of 8)	intron (NM_001033341, intron 8 of 8)	213033	NM_146090	225791	Mm.147052	NM_146090	ENSMUSG00000049090	Zadh2	C530046K17Rik|PTGR-3|Pthr3	zinc binding alcohol dehydrogenase, domain containing 2	protein-coding	0.005000	0.298507			39(TAATTCTCTTTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2506	chr6	114951487	114951687	+	2.51556	NA	intron (NM_001356371, intron 2 of 5)	intron (NM_001356371, intron 2 of 5)	17616	NM_001356371	232334	Mm.268357	NM_177683	ENSMUSG00000030315	Vgll4	BC048841|VGL-4	vestigial like family member 4	protein-coding	0.000000	0.328358			-62(ATTTGCATAGAAAACA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2312	chr5	107541527	107541727	+	2.51556	NA	intron (NM_175241, intron 2 of 6)	intron (NM_175241, intron 2 of 6)	6907	NM_182745	76421	Mm.67037	NM_175241	ENSMUSG00000089798	1700028K03Rik	-	RIKEN cDNA 1700028K03 gene	protein-coding	0.000000	0.308458	-63(GATGAATAATGCATT,+,0.00),-63(GATGAATAATGCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1137	chr15	76876934	76877134	+	2.51556	NA	Intergenic	RLTR13D3|LTR|ERVK	-2219	NM_145916	223669	Mm.38948	NM_145916	ENSMUSG00000033669	Zfp7	KRAB20|KRAB7|Krox-2|Zfp-7|Zfp65|Zfp80|Zfp86-rs1|mszf73-2	zinc finger protein 7	protein-coding	0.000000	0.393035	19(ATTGCATTATTCATG,+,0.00),19(ATTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-107	chr1	91459416	91459616	+	2.51556	NA	promoter-TSS (NM_011066)	promoter-TSS (NM_011066)	-188	NM_011066	18627	Mm.482463	NM_011066	ENSMUSG00000055866	Per2	mKIAA0347|mPer2	period circadian clock 2	protein-coding	0.120000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-2628	chr7	97245760	97245960	+	2.51556	NA	intron (NM_001162477, intron 2 of 9)	intron (NM_001162477, intron 2 of 9)	86249	NM_001177412	244144	Mm.297541	NM_001177412	ENSMUSG00000035713	Usp35	Gm1088|Gm493	ubiquitin specific peptidase 35	protein-coding	0.005000	0.437811	3(GATGAATTATTCATG,+,0.00),3(GATGAATTATTCATG,-,0.00)		
merged_common-218	chr7	90539526	90539726	+	2.51556	NA	Intergenic	Intergenic	-63631	NM_026734	68472	Mm.289791	NM_026734	ENSMUSG00000030614	Tmem126b	1110001A23Rik	transmembrane protein 126B	protein-coding	0.020000	0.467662			-87(ATCAGCAGGACAAAAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1357	chr17	45096292	45096492	+	2.51556	NA	intron (NR_158206, intron 11 of 11)	intron (NR_158206, intron 11 of 11)	-215507	NM_029257	75341	Mm.386821	NM_029257		4930564C03Rik	-	RIKEN cDNA 4930564C03 gene	protein-coding	0.015000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-401	chr10	117869939	117870139	+	2.51001	NA	Intergenic	Intergenic	-24065	NM_024457	215449	Mm.233009	NM_024457	ENSMUSG00000052681	Rap1b	2810443E11Rik	RAS related protein 1b	protein-coding	0.005000	0.462687	32(CATGCATTATTCATG,+,0.00),32(CATGCATTATTCATG,-,0.00)		
merged_common-106	chr16	13317080	13317280	+	2.51001	NA	intron (NM_181860, intron 1 of 3)	intron (NM_181860, intron 1 of 3)	-41241	NM_153588	239719	Mm.270643	NM_153588	ENSMUSG00000009569	Mrtfb	Gt4-1|MRTF-B|Mkl2|mKIAA1243	myocardin related transcription factor B	protein-coding	0.000000	0.353234	-22(TATGAATAATGCATA,+,0.00),-22(TATGAATAATGCATA,-,0.00),-15(AATGCATATTTCATG,+,0.00),-15(AATGCATATTTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-553	chr11	86580333	86580533	+	2.40404	NA	Intergenic	Intergenic	3725	NR_029738	387140		NR_029738	ENSMUSG00000065455	Mir21a	Mir21|Mirn21|mmu-mir-21|mmu-mir-21a	microRNA 21a	ncRNA	0.000000	0.497512			
ePOU_nocontrol_ChIP_peaks_unique-2223	chr5	31636697	31636897	+	2.40404	NA	intron (NM_153196, intron 7 of 7)	intron (NM_153196, intron 7 of 7)	22846	NM_025796	66845	Mm.120763	NM_025796	ENSMUSG00000106918	Mrpl33	0610009M10Rik|L33mt|MRP-L33	mitochondrial ribosomal protein L33	protein-coding	0.010000	0.412935			
Oct4_nocontrol_ChIP_peaks_unique-65	chr4	28967666	28967866	+	2.40404	NA	TTS (NM_010141)	TTS (NM_010141)	-100313	NR_151693	102634169		NR_151693		Gm11917	-	predicted gene 11917	ncRNA	0.010000	0.388060			14(ATTTGCATACGAAAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-204	chr1	177131801	177132001	+	2.40404	NA	intron (NM_011785, intron 1 of 12)	intron (NM_011785, intron 1 of 12)	116866	NM_011785	23797	Mm.235194	NM_011785	ENSMUSG00000019699	Akt3	AI851531|D930002M15Rik|Nmf350	thymoma viral proto-oncogene 3	protein-coding	0.015000	0.447761		-81(TATAAATATGCATT,+,0.00),-81(TATAAATATGCATT,-,0.00)	
merged_common-62	chr12	53508591	53508791	+	2.40404	NA	intron (NM_001370964, intron 4 of 12)	intron (NM_001370964, intron 4 of 12)	260259	NM_001370963	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding	0.000000	0.373134			-17(CCATTCTTATGTAAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1749	chr2	114696556	114696756	+	2.40404	NA	Intergenic	ORR1B2|LTR|ERVL-MaLR	-41692	NM_025675	66632	Mm.117809	NM_025675	ENSMUSG00000057147	Dph6	5730421E18Rik|Atpbd4	diphthamine biosynthesis 6	protein-coding	0.000000	0.363184	39(TATGCATTATTCATA,+,0.00),39(TATGCATTATTCATA,-,0.00)		-22(TCATTTTCATTTAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2136	chr4	107717736	107717936	+	2.40404	NA	Intergenic	Intergenic	-33606	NM_019872	56296	Mm.141324	NM_019872	ENSMUSG00000028610	Dmrtb1	Dmrt6|Prp13	DMRT-like family B with proline-rich C-terminal, 1	protein-coding	0.015000	0.497512			48(GTTTTGGTATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1198	chr16	18395343	18395543	+	2.40404	NA	intron (NM_001272032, intron 1 of 15)	intron (NM_001272032, intron 1 of 15)	2880	NM_001272032	11877	Mm.293599	NM_033474	ENSMUSG00000000325	Arvcf	-	armadillo repeat gene deleted in velocardiofacial syndrome	protein-coding	0.015000	0.532338			
ePOU_nocontrol_ChIP_peaks_unique-494	chr11	59839142	59839342	+	2.40404	NA	intron (NM_011991, intron 1 of 11)	CpG	525	NM_011991	26572	Mm.40	NM_011991	ENSMUSG00000019373	Cops3	Csn3|Sgn3	COP9 signalosome subunit 3	protein-coding	0.065000	0.621891			
ePOU_nocontrol_ChIP_peaks_unique-2813	chr8	122906586	122906786	+	2.40404	NA	intron (NR_037865, intron 4 of 13)	intron (NR_037865, intron 4 of 13)	58312	NM_007662	12555	Mm.1976	NM_007662	ENSMUSG00000031962	Cdh15	AI323380|Cdh14|Mcad	cadherin 15	protein-coding	0.015000	0.527363			
ePOU_nocontrol_ChIP_peaks_unique-2478	chr6	92481308	92481508	+	2.40404	NA	promoter-TSS (NM_001134460)	promoter-TSS (NM_001134460)	-16	NM_001134460	243548	Mm.248820	NM_001081146	ENSMUSG00000030020	Prickle2	6230400G14Rik|6720451F06Rik|mpk2	prickle planar cell polarity protein 2	protein-coding	0.040000	0.487562			61(TTATTTACATGTAAAT,+,0.00),63(ATTTACATGTAAATTA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-161	chr1	152511282	152511482	+	2.40404	NA	TTS (NM_177756)	TTS (NM_177756)	111515	NM_177756	269132	Mm.23782	NM_177756	ENSMUSG00000032649	Colgalt2	AI427652|D730024P12|Glt25d2	collagen beta(1-O)galactosyltransferase 2	protein-coding	0.005000	0.527363			
ePOU_nocontrol_ChIP_peaks_unique-2382	chr5	149980218	149980418	+	2.40404	NA	Intergenic	ERVL-B4-int|LTR|ERVL	-38357	NM_001289566	140498	Mm.444643	NM_080468	ENSMUSG00000053368	Rxfp2	Gpr106|Great|Lgr8	relaxin/insulin-like family peptide receptor 2	protein-coding	0.000000	0.303483		-67(TATGAATATGCATG,+,0.00),-67(TATGAATATGCATG,-,0.00)	60(GTTTAAAAAAGAAAAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2852	chr9	30600722	30600922	+	2.40404	NA	Intergenic	Intergenic	173493	NM_028874	102607	Mm.35084	NM_028874	ENSMUSG00000031993	Snx19	3526401K03Rik|AI195321|AI848208|mKIAA0254	sorting nexin 19	protein-coding	0.010000	0.318408		-90(CATGAATATAAATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2713	chr8	35123527	35123727	+	2.40404	NA	Intergenic	Intergenic	-157937	NM_175091	21951	Mm.88364	NM_175091	ENSMUSG00000031529	Tnks	4930554K12Rik|AI662855|ARTD5|C86528|D130072O21Rik|TANK1|mTNKS1	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	protein-coding	0.045000	0.472637			-96(GGATTCAGATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1491	chr18	69579716	69579916	+	2.40404	NA	intron (NM_001361127, intron 8 of 19)	intron (NM_001361127, intron 8 of 19)	233656	NM_001361128	21413	Mm.4269	NM_013685	ENSMUSG00000053477	Tcf4	5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19	transcription factor 4	protein-coding	0.030000	0.378109	33(TGTGAATAATTCATC,+,0.00),33(TGTGAATAATTCATC,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-533	chr11	77673610	77673810	+	2.40404	NA	Intergenic	RLTR25B|LTR|ERVK	-12429	NM_001024205	68564	Mm.428996	NM_001024205	ENSMUSG00000037857	Nufip2	1110001M19Rik|9530056D24Rik|AI256692|AI461731|PIG1|mKIAA1321	nuclear fragile X mental retardation protein interacting protein 2	protein-coding	0.000000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-221	chr1	184675505	184675705	+	2.40404	NA	Intergenic	LFSINE_Vert|SINE|tRNA	-36892	NR_040627	74971	Mm.410816	NR_040627	ENSMUSG00000092578	4930488B22Rik	-	RIKEN cDNA 4930488B22 gene	ncRNA	0.015000	0.517413			
ePOU_nocontrol_ChIP_peaks_unique-309	chr10	44434871	44435071	+	2.40404	NA	Intergenic	Intergenic	23777	NM_007548	12142	Mm.4800	NM_007548	ENSMUSG00000038151	Prdm1	Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo	PR domain containing 1, with ZNF domain	protein-coding	0.020000	0.412935			-7(ATTTGCATAAATCTGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2676	chr7	136640599	136640799	+	2.40404	NA	Intergenic	Intergenic	69905	NR_046021	621677	Mm.207290	NR_046021	ENSMUSG00000110101	Gm6249	EG621677	predicted gene 6249	ncRNA	0.000000	0.402985			-54(GTTTTATAATGTAGAT,+,0.00),-30(ATTTGCATGAACATTT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1332	chr17	27056777	27056977	+	2.40404	NA	promoter-TSS (NM_080553)	promoter-TSS (NM_080553)	-427	NM_080553	16440	Mm.458106	NM_080553	ENSMUSG00000042644	Itpr3	IP3R 3|Ip3r3|Itpr-3|tf	inositol 1,4,5-triphosphate receptor 3	protein-coding	0.030000	0.437811			-80(AATTAAAAAACAAAAA,-,0.00),42(ATTTGCAACGCTAAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-338	chr10	74379818	74380018	+	2.40404	NA	intron (NM_001142747, intron 17 of 26)	intron (NM_001142747, intron 17 of 26)	558051	NM_001142747	11994	Mm.338933	NM_023115	ENSMUSG00000052613	Pcdh15	BB078305|Gm9815|Ush1f|av|nmf19|roda	protocadherin 15	protein-coding	0.005000	0.477612			
ePOU_nocontrol_ChIP_peaks_unique-668	chr12	34519402	34519602	+	2.40404	NA	intron (NM_024124, intron 2 of 11)	intron (NM_024124, intron 2 of 11)	9387	NM_024124	79221	Mm.310551	NM_024124	ENSMUSG00000004698	Hdac9	AV022454|D030072B18Rik|HD7B|HD9|HDRP|Hdac7b|Mitr|mKIAA0744	histone deacetylase 9	protein-coding	0.000000	0.268657			20(ATTTGCCTTACAAAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1787	chr2	134983756	134983956	+	2.40404	NA	intron (NM_001145830, intron 2 of 31)	intron (NM_001145830, intron 2 of 31)	197692	NM_001145830	18795	Mm.330607	NM_019677	ENSMUSG00000051177	Plcb1	3110043I21Rik|AI132408|Plcb|mKIAA0581	phospholipase C, beta 1	protein-coding	0.005000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-637	chr12	4408205	4408405	+	2.40404	NA	intron (NM_010881, intron 2 of 22)	intron (NM_010881, intron 2 of 22)	68877	NM_010881	17977	Mm.301039	NM_010881	ENSMUSG00000020647	Ncoa1	KAT13A|NCoA-1|NRC-1|SRC-1|SRC-a|SRC1|bHLHe74|mNRC-1	nuclear receptor coactivator 1	protein-coding	0.005000	0.358209	-3(CATGTAAAATGTATT,+,0.00)		29(TTGTTGTTATGCTTAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2960	chr9	120602930	120603130	+	2.40404	NA	Intergenic	Intergenic	25699	NR_073359	76100	Mm.48212	NR_073359	ENSMUSG00000052658	5830454E08Rik	-	RIKEN cDNA 5830454E08 gene	ncRNA	0.040000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-770	chr12	112543091	112543291	+	2.40404	NA	Intergenic	Intergenic	-32031	NM_178915	104885	Mm.37751	NM_178915	ENSMUSG00000054013	Tmem179	AI839735	transmembrane protein 179	protein-coding	0.025000	0.542289			
ePOU_nocontrol_ChIP_peaks_unique-2298	chr5	102727455	102727655	+	2.40404	NA	intron (NM_029270, intron 3 of 9)	intron (NM_029270, intron 3 of 9)	-41255	NM_001286468	231532	Mm.440191	NM_029270	ENSMUSG00000057315	Arhgap24	0610025G21Rik	Rho GTPase activating protein 24	protein-coding	0.005000	0.298507			84(ACATTTTCATGTTAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-569	chr11	95384714	95384914	+	2.40404	NA	promoter-TSS (NM_001357797)	promoter-TSS (NM_001357797)	-42	NM_016752	110172	Mm.4593	NM_016752	ENSMUSG00000020873	Slc35b1	UGTrel1|Ugalt2	solute carrier family 35, member B1	protein-coding	0.050000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-2418	chr6	39136760	39136960	+	2.40404	NA	3' UTR (NM_001033430, exon 20 of 20)	3' UTR (NM_001033430, exon 20 of 20)	18387	NR_045813	75379	Mm.348014	NR_045813	ENSMUSG00000073144	4930599N23Rik	-	RIKEN cDNA 4930599N23 gene	ncRNA	0.000000	0.293532			
ePOU_nocontrol_ChIP_peaks_unique-1211	chr16	30520428	30520628	+	2.40404	NA	intron (NM_001357413, intron 10 of 11)	L1MD3|LINE|L1	30050	NM_001361297	224090	Mm.241459	NM_172614	ENSMUSG00000022537	Tmem44	1700007N03Rik|9330161C17Rik|B230220N21	transmembrane protein 44	protein-coding	0.025000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-785	chr13	10397974	10398174	+	2.40404	NA	Intergenic	Intergenic	-37271	NM_033269	12671	Mm.342315	NM_033269	ENSMUSG00000046159	Chrm3	Chrm-3|M3|M3R	cholinergic receptor, muscarinic 3, cardiac	protein-coding	0.000000	0.328358			-5(ATATGAATGACAAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2252	chr5	62601956	62602156	+	2.40404	NA	TTS (NM_178407)	TTS (NM_178407)	164121	NM_178407	212285	Mm.244403	NM_178407	ENSMUSG00000037999	Arap2	Centd1|Gm148|mKIAA0580	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	protein-coding	0.010000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-316	chr10	50607063	50607263	+	2.40404	NA	intron (NM_198007, intron 2 of 41)	intron (NM_198007, intron 2 of 41)	14494	NM_198007	77987	Mm.222497	NM_198007	ENSMUSG00000038774	Ascc3	ASC1p200|B630009I04Rik|BC023451|D430001L07Rik|D630041L21|Helic1|RNAH	activating signal cointegrator 1 complex subunit 3	protein-coding	0.000000	0.323383			
ePOU_nocontrol_ChIP_peaks_unique-731	chr12	81484746	81484946	+	2.40404	NA	promoter-TSS (NR_132135)	promoter-TSS (NR_132135)	5	NR_132135	66272	Mm.439970	NM_025461	ENSMUSG00000091803	Cox16	1810020G14Rik|1810055I05Rik|BB388670	cytochrome c oxidase assembly protein 16	protein-coding	0.055000	0.557214			
ePOU_nocontrol_ChIP_peaks_unique-2159	chr4	129960568	129960768	+	2.40404	NA	promoter-TSS (NR_040648)	promoter-TSS (NR_040648)	-180	NR_040648	72225	Mm.102193	NR_040647		1700003M07Rik	-	RIKEN cDNA 1700003M07 gene	ncRNA	0.025000	0.512438			
ePOU_nocontrol_ChIP_peaks_unique-541	chr11	82033246	82033446	+	2.40404	NA	Intergenic	Intergenic	-2231	NM_011333	20296	Mm.290320	NM_011333	ENSMUSG00000035385	Ccl2	AI323594|HC11|JE|MCAF|MCP-1|MCP1|SMC-CF|Scya2|Sigje	chemokine (C-C motif) ligand 2	protein-coding	0.020000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-344	chr10	78756104	78756304	+	2.40404	NA	intron (NR_155762, intron 1 of 4)	intron (NR_155762, intron 1 of 4)	-3137	NM_027630	70976	Mm.188505	NM_027630	ENSMUSG00000078442	Ccdc105	4931413A09Rik	coiled-coil domain containing 105	protein-coding	0.010000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-951	chr14	34317151	34317351	+	2.40404	NA	intron (NM_008133, intron 1 of 12)	intron (NM_008133, intron 1 of 12)	6524	NM_008133	14661	Mm.10600	NM_008133	ENSMUSG00000021794	Glud1	AI118167|Gdh-X|Glud|Gludl	glutamate dehydrogenase 1	protein-coding	0.020000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-409	chr10	128566062	128566262	+	2.40404	NA	promoter-TSS (NM_011119)	promoter-TSS (NM_011119)	-228	NM_011119	18813	Mm.4742	NM_011119	ENSMUSG00000025364	Pa2g4	38kDa|AA672939|Ebp1|Plfap	proliferation-associated 2G4	protein-coding	0.090000	0.656716			
ePOU_nocontrol_ChIP_peaks_unique-1397	chr17	83358339	83358539	+	2.40404	NA	intron (NM_001114361, intron 1 of 23)	intron (NM_001114361, intron 1 of 23)	7508	NM_001114362	78798	Mm.295565	NM_199466	ENSMUSG00000032624	Eml4	4930443C24Rik|AI644019	echinoderm microtubule associated protein like 4	protein-coding	0.000000	0.338308	25(CATGAATAATTCATG,+,0.00),25(CATGAATAATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-604	chr11	109611587	109611787	+	2.40404	NA	promoter-TSS (NM_145940)	promoter-TSS (NM_145940)	-298	NM_145940	52639	Mm.35817	NM_145940	ENSMUSG00000041895	Wipi1	4930533H01Rik|AW411817|D11Ertd498e	WD repeat domain, phosphoinositide interacting 1	protein-coding	0.050000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-1194	chr16	16826471	16826671	+	2.40404	NA	intron (NM_015773, intron 2 of 10)	Lx9|LINE|L1	2792	NM_015773	50525	Mm.31701	NM_015773	ENSMUSG00000022783	Spag6l	PF16|Spag6|Spag6l1	sperm associated antigen 6-like	protein-coding	0.000000	0.328358		-90(CATTCATATGTATA,+,0.00)	-91(TCATTCATATGTATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2707	chr8	30648794	30648994	+	2.40404	NA	Intergenic	Intergenic	80499	NR_045856	71314	Mm.158666	NR_045856	ENSMUSG00000097044	4933433F19Rik	-	RIKEN cDNA 4933433F19 gene	ncRNA	0.000000	0.343284			-6(TCTTTTTTTTTTTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2034	chr3	153332128	153332328	+	2.40404	NA	intron (NM_011372, intron 3 of 4)	Lx9|LINE|L1	-33579	NR_126464	75489	Mm.443252	NR_126464	ENSMUSG00000105023	1700012D16Rik	-	RIKEN cDNA 1700012D16 gene	ncRNA	0.000000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-850	chr13	70637697	70637897	+	2.40404	NA	promoter-TSS (NM_144837)	promoter-TSS (NM_144837)	-163	NM_144837	218333	Mm.139738	NM_144837	ENSMUSG00000034525	Ice1	C77245|mKIAA0947	interactor of little elongation complex ELL subunit 1	protein-coding	0.100000	0.716418			
ePOU_nocontrol_ChIP_peaks_unique-2756	chr8	71537296	71537496	+	2.40404	NA	promoter-TSS (NM_198095)	promoter-TSS (NM_198095)	76	NM_198095	69550	Mm.260325	NM_198095	ENSMUSG00000046718	Bst2	2310015I10Rik|Bst-2|C87040|CD317|DAMP-1|GREG	bone marrow stromal cell antigen 2	protein-coding	0.050000	0.606965			
ePOU_nocontrol_ChIP_peaks_unique-2884	chr9	57560970	57561170	+	2.40404	NA	exon (NM_022813, exon 1 of 9)	exon (NM_022813, exon 1 of 9)	126	NM_022813	24044	Mm.286069	NM_022813	ENSMUSG00000040188	Scamp2	AI875466|Sc2	secretory carrier membrane protein 2	protein-coding	0.065000	0.592040			
ePOU_nocontrol_ChIP_peaks_unique-2620	chr7	89699979	89700179	+	2.40404	NA	intron (NM_181407, intron 1 of 13)	intron (NM_181407, intron 1 of 13)	67261	NM_181407	109264	Mm.334011	NM_181407	ENSMUSG00000030621	Me3	1700020C08Rik|B230207H15Rik	malic enzyme 3, NADP(+)-dependent, mitochondrial	protein-coding	0.015000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-2384	chr6	4891681	4891881	+	2.40404	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-11194	NM_001363809	243725	Mm.332901	NM_181595	ENSMUSG00000032827	Ppp1r9a	2810430P21Rik|4930518N04Rik|5330407E15|A230094E16Rik|BB181831|NRB|neurabin-I	protein phosphatase 1, regulatory subunit 9A	protein-coding	0.010000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-1341	chr17	29268920	29269120	+	2.40404	NA	intron (NM_030561, intron 1 of 8)	CpG	232	NM_030561	80748	Mm.290116	NM_030561	ENSMUSG00000052712	BC004004	2400006G15Rik	cDNA sequence BC004004	protein-coding	0.125000	0.781095			
ePOU_nocontrol_ChIP_peaks_unique-797	chr13	20354366	20354566	+	2.40404	NA	intron (NM_080288, intron 14 of 21)	intron (NM_080288, intron 14 of 21)	-118524	NM_198093	140580	Mm.342392	NM_080288	ENSMUSG00000041112	Elmo1	6330578D22Rik|C230095H21Rik|CED-12	engulfment and cell motility 1	protein-coding	0.000000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-822	chr13	40575408	40575608	+	2.40404	NA	Intergenic	Intergenic	-152300	NR_125899	102633805		NR_125899	ENSMUSG00000097752	Gm26688	Tfap2a-as1	predicted gene, 26688	ncRNA	0.020000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-1798	chr2	140396548	140396748	+	2.40404	NA	intron (NM_001013802, intron 1 of 18)	intron (NM_001013802, intron 1 of 18)	1213	NM_028387	72899	Mm.229466	NM_028387	ENSMUSG00000068205	Macrod2	1110033L15Rik|2610107G07Rik|2900006F19Rik	MACRO domain containing 2	protein-coding	0.015000	0.398010			0(ATTTGCATATAAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-755	chr12	100186143	100186343	+	2.40404	NA	Intergenic	Intergenic	-1725	NR_045282	100038378	Mm.387075	NR_045282	ENSMUSG00000072884	Gm10433	-	predicted gene 10433	ncRNA	0.010000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-2317	chr5	110363080	110363280	+	2.40404	NA	exon (NM_028596, exon 12 of 12)	exon (NM_028596, exon 12 of 12)	18450	NM_001310709	381667	Mm.332572	NM_001033459	ENSMUSG00000072754	Lrcol1	Clpsl3|Gm1679	leucine rich colipase-like 1	protein-coding	0.145000	0.771144			
ePOU_nocontrol_ChIP_peaks_unique-21	chr1	21770624	21770824	+	2.40404	NA	intron (NM_001160139, intron 1 of 14)	intron (NM_001160139, intron 1 of 14)	191218	NM_023872	226922	Mm.336519	NM_023872	ENSMUSG00000028033	Kcnq5	7730402H11|9230107O05Rik|AA589396|D1Mgi1	potassium voltage-gated channel, subfamily Q, member 5	protein-coding	0.005000	0.363184			-20(ATTAGCAAGGCTAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2378	chr5	147860410	147860610	+	2.40404	NA	promoter-TSS (NM_025624)	promoter-TSS (NM_025624)	-118	NM_025624	66537	Mm.332855	NM_025624	ENSMUSG00000029649	Pomp	2510048O06Rik|Ump1	proteasome maturation protein	protein-coding	0.095000	0.711443			
ePOU_nocontrol_ChIP_peaks_unique-2891	chr9	62811925	62812125	+	2.40404	NA	promoter-TSS (NM_010193)	promoter-TSS (NM_010193)	-377	NM_010193	14155	Mm.24069	NM_010193	ENSMUSG00000032244	Fem1b	mKIAA0396	feminization 1 homolog b (C. elegans)	protein-coding	0.050000	0.562189			
ePOU_nocontrol_ChIP_peaks_unique-1485	chr18	67600180	67600380	+	2.40404	NA	intron (NM_194355, intron 1 of 16)	L1ME3A|LINE|L1	10626	NM_194355	68166	Mm.208723	NM_176832	ENSMUSG00000024533	Spire1	6030430B19Rik|AI415299|AU022898|AW550622|Spir-1	spire type actin nucleation factor 1	protein-coding	0.005000	0.333333			-11(ATTTGAATCCCAAATG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1949	chr3	88336248	88336448	+	2.40404	NA	promoter-TSS (NM_178246)	promoter-TSS (NM_178246)	88	NM_178246	229512	Mm.439830	NM_173188	ENSMUSG00000001415	Smg5	BC024683|mKIAA1089	Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)	protein-coding	0.070000	0.706468			
ePOU_nocontrol_ChIP_peaks_unique-2800	chr8	109172644	109172844	+	2.40404	NA	intron (NR_126329, intron 3 of 9)	Tigger9a|DNA|TcMar-Tigger	77001	NR_151498	105243282	Mm.203332	NR_151498		4922502B01Rik	2900056M07Rik	RIKEN cDNA 4922502B01 gene	ncRNA	0.005000	0.303483	-15(TATGCATAATTCATG,+,0.00),-15(TATGCATAATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1207	chr16	26581491	26581691	+	2.40404	NA	promoter-TSS (NM_001159318)	promoter-TSS (NM_001159318)	-114	NM_001159317	16180	Mm.253424	NM_008364	ENSMUSG00000022514	Il1rap	6430709H04Rik|AI255955|AV239853|IL-1RAcP	interleukin 1 receptor accessory protein	protein-coding	0.120000	0.751244			
ePOU_nocontrol_ChIP_peaks_unique-961	chr14	47916739	47916939	+	2.40404	NA	intron (NR_045959, intron 2 of 3)	L2b|LINE|L2	17975	NR_045959	73961	Mm.390702	NR_045959	ENSMUSG00000115609	4930447J18Rik	4930425M13Rik	RIKEN cDNA 4930447J18 gene	ncRNA	0.010000	0.398010			-2(ACATTCTTATTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1367	chr17	54621832	54622032	+	2.40404	NA	Intergenic	RLTR13B3|LTR|ERVK	-251858	NR_045825	69418	Mm.391004	NR_045825	ENSMUSG00000099747	1700025K24Rik	-	RIKEN cDNA 1700025K24 gene	ncRNA	0.005000	0.417910	39(CATGAATAATGCAAT,+,0.00),39(CATGAATAATGCAAT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1391	chr17	80625792	80625992	+	2.40404	NA	intron (NM_001360278, intron 14 of 33)	intron (NM_001360278, intron 14 of 33)	-48079	NM_001360144	381113	Mm.329216	NM_001033443	ENSMUSG00000033966	Cdkl4	AU067824|Gm942	cyclin-dependent kinase-like 4	protein-coding	0.010000	0.388060			-25(ATTAAAATAACTAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1046	chr14	121797769	121797969	+	2.40404	NA	promoter-TSS (NM_134074)	promoter-TSS (NM_134074)	-135	NM_134074	105445	Mm.378591	NM_134074	ENSMUSG00000025558	Dock9	AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058	dedicator of cytokinesis 9	protein-coding	0.145000	0.805970			
ePOU_nocontrol_ChIP_peaks_unique-1770	chr2	128818124	128818324	+	2.40404	NA	promoter-TSS (NM_028248)	promoter-TSS (NM_028248)	-79	NM_028248	72477	Mm.259688	NM_028248	ENSMUSG00000014353	Tmem87b	2610301K12Rik|2810431I02Rik|AU014804	transmembrane protein 87B	protein-coding	0.085000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-658	chr12	31116413	31116613	+	2.40404	NA	Intergenic	Intergenic	42545	NM_027828	104943	Mm.248938	NM_027828	ENSMUSG00000036136	Fam110c	9030611O19Rik|AU019489	family with sequence similarity 110, member C	protein-coding	0.015000	0.527363			
ePOU_nocontrol_ChIP_peaks_unique-238	chr10	3359419	3359619	+	2.40404	NA	Intergenic	Intergenic	-6631	NM_133485	76142	Mm.308126	NM_133485	ENSMUSG00000040653	Ppp1r14c	6330514J04Rik|KEPI	protein phosphatase 1, regulatory inhibitor subunit 14C	protein-coding	0.005000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-2995	chrX	106921401	106921601	+	2.40404	NA	intron (NM_175271, intron 1 of 2)	intron (NM_175271, intron 1 of 2)	876	NM_175271	78134	Mm.90147	NM_175271	ENSMUSG00000049929	Lpar4	5730485F04Rik|Gpr23|LPA4|p2y9	lysophosphatidic acid receptor 4	protein-coding	0.000000	0.303483	-55(ATTGAATAATTCATG,+,0.00),-55(ATTGAATAATTCATG,-,0.00)		46(TATTTGCCATGTAAAT,+,0.00),84(AAATTCTCTTGCATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1562	chr19	31118192	31118392	+	2.40404	NA	intron (NM_001013833, intron 3 of 17)	RLTR40|LTR|ERVK	35451	NM_031249	83410	Mm.22031	NM_031249	ENSMUSG00000053536	Cstf2t	64kDa|C77975|tCstF-64|tauCstF-64	cleavage stimulation factor, 3' pre-RNA subunit 2, tau	protein-coding	0.015000	0.358209	26(CATGCATTATTCATG,+,0.00),26(CATGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1370	chr17	56326258	56326458	+	2.40404	NA	intron (NM_001357909, intron 1 of 21)	CpG	308	NM_172132	193796	Mm.45047	NM_172132	ENSMUSG00000024201	Kdm4b	4732474L06Rik|Jmjd2b	lysine (K)-specific demethylase 4B	protein-coding	0.115000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-2322	chr5	113900999	113901199	+	2.40404	NA	intron (NM_011779, intron 1 of 10)	intron (NM_011779, intron 1 of 10)	7607	NM_011779	23790	Mm.260158	NM_011779	ENSMUSG00000004530	Coro1c	AL022675|AW455561|AW548837|CRN2	coronin, actin binding protein 1C	protein-coding	0.025000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-1079	chr15	30506422	30506622	+	2.40404	NA	intron (NM_008729, intron 3 of 22)	intron (NM_008729, intron 3 of 22)	333988	NM_008729	18163	Mm.321648	NM_008729	ENSMUSG00000022240	Ctnnd2	Catnd2|Nprap|neurojugin	catenin (cadherin associated protein), delta 2	protein-coding	0.010000	0.348259			16(TCATAGTTATGCTAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2175	chr4	145104998	145105198	+	2.40404	NA	intron (NM_001276465, intron 39 of 69)	intron (NM_001276465, intron 39 of 69)	85568	NM_001276502	230895	Mm.240310	NM_001033190	ENSMUSG00000020220	Vps13d	-	vacuolar protein sorting 13D	protein-coding	0.005000	0.477612			52(ATTTGGATGACAATGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-669	chr12	34808161	34808361	+	2.40404	NA	intron (NM_001271386, intron 3 of 27)	intron (NM_001271386, intron 3 of 27)	108834	NM_001271386	79221	Mm.310551	NM_024124	ENSMUSG00000004698	Hdac9	AV022454|D030072B18Rik|HD7B|HD9|HDRP|Hdac7b|Mitr|mKIAA0744	histone deacetylase 9	protein-coding	0.000000	0.328358		74(CATGAATACTCATT,+,0.00)	10(ACATTGTTGTGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2916	chr9	84099551	84099751	+	2.40404	NA	intron (NM_199195, intron 9 of 10)	intron (NM_199195, intron 9 of 10)	150870	NM_199195	12040	Mm.12819	NM_199195	ENSMUSG00000032263	Bckdhb	BCKDE1B|BCKDH E1-beta	branched chain ketoacid dehydrogenase E1, beta polypeptide	protein-coding	0.000000	0.313433			-68(CAGTGGTCATGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-489	chr11	58948834	58949034	+	2.40404	NA	promoter-TSS (NM_030082)	promoter-TSS (NM_030082)	23	NM_030082	78303	Mm.28022	NM_030082	ENSMUSG00000056895	Hist3h2ba	1500011O09Rik|AI413321	histone cluster 3, H2ba	protein-coding	0.040000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-2387	chr6	8413247	8413447	+	2.40404	NA	intron (NM_001302353, intron 4 of 4)	intron (NM_001302353, intron 4 of 4)	95814	NR_040452	320312	Mm.374890	NR_040452	ENSMUSG00000087305	A430035B10Rik	2810488G03Rik	RIKEN cDNA A430035B10 gene	ncRNA	0.010000	0.328358	-37(AATACATTATTCAGG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2599	chr7	69978339	69978539	+	2.40404	NA	Intergenic	Intergenic	359383	NR_131145	624549	Mm.116344	NR_131144	ENSMUSG00000109097	Gm29683	Gm44536	predicted gene, 29683	ncRNA	0.015000	0.363184	-68(TATGTTTTATGCATG,+,0.00),-68(TATGTTTTATGCATG,-,0.00)		-11(ATTTACAAATGAAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1373	chr17	57249379	57249579	+	2.40404	NA	promoter-TSS (NM_001242390)	promoter-TSS (NM_001242390)	28	NM_001242390	106628	Mm.37368	NM_134125	ENSMUSG00000019487	Trip10	AI646975|Cip4	thyroid hormone receptor interactor 10	protein-coding	0.080000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-2205	chr5	22596980	22597180	+	2.40404	NA	Intergenic	Intergenic	33301	NR_163852									0.015000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-1299	chr16	98082139	98082339	+	2.40404	NA	intron (NR_015491, intron 1 of 4)	intron (NR_015491, intron 1 of 4)	200	NR_015491	320586	Mm.442230	NR_015491	ENSMUSG00000116673	A630089N07Rik	-	RIKEN cDNA A630089N07 gene	ncRNA	0.025000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-1933	chr3	81318484	81318684	+	2.40404	NA	Intergenic	Intergenic	282168	NM_019971	54635	Mm.331089	NM_019971	ENSMUSG00000028019	Pdgfc	1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E	platelet-derived growth factor, C polypeptide	protein-coding	0.005000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-2953	chr9	114933873	114934073	+	2.40404	NA	promoter-TSS (NM_175380)	promoter-TSS (NM_175380)	14	NM_175380	333433	Mm.38198	NM_175380	ENSMUSG00000050627	Gpd1l	2210409H23Rik|D9Ertd660e	glycerol-3-phosphate dehydrogenase 1-like	protein-coding	0.075000	0.721393			
ePOU_nocontrol_ChIP_peaks_unique-2885	chr9	58516004	58516204	+	2.40404	NA	Intergenic	MamRep434|DNA|TcMar-Tigger	24836	NM_133983	102657	Mm.5356	NM_133983	ENSMUSG00000035914	Cd276	6030411F23Rik|AU016588|B7RP-2|B7h3	CD276 antigen	protein-coding	0.005000	0.353234	-4(TTTGCATTATTCATT,+,0.00),-4(TTTGCATTATTCATT,-,0.00)		-35(TTATTCCTTTTTAAAT,+,0.00),29(TTTTTTTCATGGAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2880	chr9	56254912	56255112	+	2.40404	NA	intron (NM_172924, intron 4 of 6)	intron (NM_172924, intron 4 of 6)	-93942	NM_019793	56434	Mm.28484	NM_019793	ENSMUSG00000032324	Tspan3	1700055K04Rik|TM4-A|Tm4sf8	tetraspanin 3	protein-coding	0.005000	0.288557		10(TATACATATTCATG,+,0.00),10(TATACATATTCATG,-,0.00)	-54(ATATCAATGACAATCC,-,0.00),-21(ATTTAAAAAGCAAATG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-805	chr13	25784644	25784844	+	2.40404	NA	Intergenic	RCHARR1|DNA|hAT-Charlie	181572	NR_045062	100503530	Mm.86763	NR_045062	ENSMUSG00000086531	Gm11351	-	predicted gene 11351	ncRNA	0.000000	0.303483			10(ATTTACATTAAAATGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-108	chr1	91540438	91540638	+	2.40404	NA	promoter-TSS (NM_023046)	promoter-TSS (NM_023046)	-27	NM_001039126	65247	Mm.234152	NM_023046	ENSMUSG00000026311	Asb1	1700029O08Rik|1700054C17Rik|AI426616|AI851378|mKIAA1146	ankyrin repeat and SOCS box-containing 1	protein-coding	0.055000	0.611940			
ePOU_nocontrol_ChIP_peaks_unique-404	chr10	120201924	120202124	+	2.40404	NA	promoter-TSS (NM_028679)	promoter-TSS (NM_028679)	106	NM_001359184	73914	Mm.146194	NM_028679	ENSMUSG00000020227	Irak3	4833428C18Rik|AI563835|IRAK-M	interleukin-1 receptor-associated kinase 3	protein-coding	0.050000	0.477612			
ePOU_nocontrol_ChIP_peaks_unique-1142	chr15	81190836	81191036	+	2.40404	NA	promoter-TSS (NM_001082536)	promoter-TSS (NM_001082536)	83	NR_015603	67638	Mm.390832	NM_026288	ENSMUSG00000047938	4930483J18Rik	-	RIKEN cDNA 4930483J18 gene	ncRNA	0.095000	0.621891			
ePOU_nocontrol_ChIP_peaks_unique-1122	chr15	66592039	66592239	+	2.40404	NA	intron (NM_001081409, intron 2 of 20)	intron (NM_001081409, intron 2 of 20)	14567	NM_001081409	239510	Mm.267473	NM_178718	ENSMUSG00000072501	Phf20l1	CGI-72|E130113K22Rik	PHD finger protein 20-like 1	protein-coding	0.000000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-1669	chr2	38621890	38622090	+	2.40404	NA	intron (NM_011187, intron 5 of 7)	intron (NM_011187, intron 5 of 7)	21916	NM_011187	19177	Mm.389251	NM_011187	ENSMUSG00000026750	Psmb7	AU020723|MC14	proteasome (prosome, macropain) subunit, beta type 7	protein-coding	0.005000	0.492537			
ePOU_nocontrol_ChIP_peaks_unique-1652	chr2	30359363	30359563	+	2.40404	NA	promoter-TSS (NM_001346806)	promoter-TSS (NM_001346806)	-147	NM_001362888	227700	Mm.33343	NM_139302	ENSMUSG00000026860	Sh3glb2	SPAS-1	SH3-domain GRB2-like endophilin B2	protein-coding	0.070000	0.512438	63(AATTCATTATGCAAA,-,0.00)		84(TTTTTTTTTTTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1534	chr19	10507206	10507406	+	2.40404	NA	intron (NM_025333, intron 3 of 3)	L1MCa|LINE|L1	17903	NM_025333	66072	Mm.180063	NM_025333	ENSMUSG00000024668	Sdhaf2	0610038F07Rik|AA407634|AW049997	succinate dehydrogenase complex assembly factor 2	protein-coding	0.010000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-310	chr10	44862405	44862605	+	2.40404	NA	Intergenic	Intergenic	-204711	NM_011156	19072	Mm.37294	NM_011156	ENSMUSG00000019849	Prep	AI047692|AI450383|D10Wsu136e|PE|PEP|Pop	prolyl endopeptidase	protein-coding	0.025000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-7	chr1	10232906	10233106	+	2.40404	NA	promoter-TSS (NM_001102430)	promoter-TSS (NM_001102430)	-336	NM_001102430	211673	Mm.229141	NM_001102430	ENSMUSG00000067851	Arfgef1	ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200	ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)	protein-coding	0.155000	0.761194			
ePOU_nocontrol_ChIP_peaks_unique-790	chr13	14613041	14613241	+	2.40404	NA	promoter-TSS (NM_008944)	promoter-TSS (NM_008944)	-101	NM_008944	19166	Mm.252255	NM_008944	ENSMUSG00000015671	Psma2	Lmpc3	proteasome (prosome, macropain) subunit, alpha type 2	protein-coding	0.060000	0.542289			
ePOU_nocontrol_ChIP_peaks_unique-1519	chr19	4962109	4962309	+	2.40404	NA	promoter-TSS (NM_025553)	promoter-TSS (NM_025553)	-97	NM_025553	66419	Mm.28494	NM_025553	ENSMUSG00000024902	Mrpl11	2410001P07Rik|L11mt	mitochondrial ribosomal protein L11	protein-coding	0.035000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-66	chr1	60421405	60421605	+	2.40404	NA	intron (NM_001198570, intron 1 of 11)	L1MA9|LINE|L1	11886	NM_198127	329165	Mm.212066	NM_198127	ENSMUSG00000026782	Abi2	8430425M24Rik|AI839867|AblBP3|ArgBP1|C130078H13	abl-interactor 2	protein-coding	0.005000	0.303483			
ePOU_nocontrol_ChIP_peaks_unique-235	chr1	192778942	192779142	+	2.40404	NA	Intergenic	Intergenic	-7823	NM_144881	226861	Mm.145857	NM_144881	ENSMUSG00000037375	Hhat	2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will	hedgehog acyltransferase	protein-coding	0.015000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-1518	chr19	4839424	4839624	+	2.40404	NA	promoter-TSS (NM_016892)	promoter-TSS (NM_016892)	158	NM_207268	399599	Mm.444704	NM_207268	ENSMUSG00000067872	Ccdc87	4931419P11Rik	coiled-coil domain containing 87	protein-coding	0.055000	0.577114			
merged_common-17	chr1	185770518	185770718	+	2.40404	NA	intron (NR_030555, intron 4 of 6)	intron (NR_030555, intron 4 of 6)	233282	NR_030555	100124483		NR_030555	ENSMUSG00000076976	Mir297c	Mirn297c	microRNA 297c	ncRNA	0.000000	0.288557		-83(AATACATATGCAGA,-,0.00)	-43(ATAAACATGATAAAGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1118	chr15	62216100	62216300	+	2.40404	NA	intron (NR_132747, intron 2 of 4)	MLT2D|LTR|ERVL	3251	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo	0.015000	0.522388			-13(TATCTGCCTTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2048	chr4	8516756	8516956	+	2.40404	NA	Intergenic	Intergenic	-18788	NM_021518	59021	Mm.397471	NM_021518	ENSMUSG00000047187	Rab2a	9330148M11Rik|C80220|Rab2	RAB2A, member RAS oncogene family	protein-coding	0.000000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-2279	chr5	79764682	79764882	+	2.40404	NA	Intergenic	L1MC2|LINE|L1	-1255789	NM_001347368	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Adgrl3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|Lphn3|mKIAA0768	adhesion G protein-coupled receptor L3	protein-coding	0.005000	0.293532			
ePOU_nocontrol_ChIP_peaks_unique-1465	chr18	53744704	53744904	+	2.40404	NA	promoter-TSS (NM_178686)	promoter-TSS (NM_178686)	-196	NM_178686	225523	Mm.193678	NM_178686	ENSMUSG00000048799	Cep120	A230075C01|AU016693|Ccdc100	centrosomal protein 120	protein-coding	0.070000	0.572139			
ePOU_nocontrol_ChIP_peaks_unique-794	chr13	16464903	16465103	+	2.40404	NA	Intergenic	Intergenic	-441580	NR_155430	100503142	Mm.359204	NR_155430		B230303A05Rik	B230303A05|EG328191	U1 small nuclear ribonucleoprotein 1C pseudogene	pseudo	0.000000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-88	chr1	75168638	75168838	+	2.40404	NA	promoter-TSS (NM_026846)	promoter-TSS (NM_026846)	3	NM_026846	68818	Mm.32646	NM_026846	ENSMUSG00000026197	Zfand2b	1110060O18Rik|C81256	zinc finger, AN1 type domain 2B	protein-coding	0.105000	0.726368			
ePOU_nocontrol_ChIP_peaks_unique-2686	chr8	5523119	5523319	+	2.40404	NA	Intergenic	Intergenic	-417932	NM_011388	20494	Mm.3500	NM_011388	ENSMUSG00000023073	Slc10a2	9130221J18Rik|AI605518|ASBT|IBAT|ISBT	solute carrier family 10, member 2	protein-coding	0.000000	0.323383			-36(ACATTGTCATGTTGAA,+,0.00)
merged_common-46	chr11	74830555	74830755	+	2.40404	NA	promoter-TSS (NM_010813)	promoter-TSS (NM_010813)	-269	NM_010813	17428	Mm.3759	NM_010813	ENSMUSG00000000282	Mnt	Rox|bHLHd3	max binding protein	protein-coding	0.055000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-1345	chr17	30421124	30421324	+	2.40404	NA	intron (NM_172618, intron 6 of 11)	intron (NM_172618, intron 6 of 11)	-25044	NR_030688	623169	Mm.440508	NR_030688		Gm6402	EG623169	ribosomal protein S17 pseudogene	pseudo	0.005000	0.288557		22(GCTGCATATTCATA,+,0.00),22(GCTGCATATTCATA,-,0.00)	70(ATTTTAAAAACAAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1162	chr15	98567742	98567942	+	2.40404	NA	promoter-TSS (NM_009833)	promoter-TSS (NM_009833)	-106	NM_001368702	12455	Mm.29941	NM_009833	ENSMUSG00000011960	Ccnt1	2810478G24Rik|AI115585|CycT1	cyclin T1	protein-coding	0.115000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-897	chr13	108277431	108277631	+	2.40404	NA	intron (NM_029001, intron 6 of 7)	URR1A|DNA|hAT-Charlie	-38806	NM_178683	218581	Mm.32318	NM_178683	ENSMUSG00000021697	Depdc1b	9830132O03|AW260467|XTP1	DEP domain containing 1B	protein-coding	0.015000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-1460	chr18	49527202	49527402	+	2.40404	NA	Intergenic	RLTR13B1|LTR|ERVK	4013	NR_033785	67321	Mm.245802	NR_033785	ENSMUSG00000100297	1700044K03Rik	-	RIKEN cDNA 1700044K03 gene	ncRNA	0.010000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-2738	chr8	63770260	63770460	+	2.40404	NA	Intergenic	Intergenic	181810	NM_001195687	244495	Mm.485331	NM_001195687	ENSMUSG00000094443	Sgo2b	EG244495|Gm4975|Sgol2b	shugoshin 2B	protein-coding	0.000000	0.338308		17(CATACATATTCAGG,+,0.00),17(CATACATATTCAGG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2150	chr4	121100539	121100739	+	2.40404	NA	Intergenic	RLTR13B1|LTR|ERVK	-2429	NM_172700	230709	Mm.34399	NM_172700	ENSMUSG00000043207	Zmpste24	A530043O15Rik|D030046F19|FACE1|Face-1|MADB|STE24|Ste24p	zinc metallopeptidase, STE24	protein-coding	0.005000	0.422886	-34(ATTGCATTATTCATG,+,0.00),-34(ATTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-895	chr13	106816633	106816833	+	2.40404	NA	intron (NM_029665, intron 28 of 29)	intron (NM_029665, intron 28 of 29)	120225	NM_029665	76582	Mm.132208	NM_029665	ENSMUSG00000042590	Ipo11	1700081H05Rik|2510001A17Rik|AI314624|AW555235|E330021B14Rik|Ranbp11	importin 11	protein-coding	0.015000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-349	chr10	80261218	80261418	+	2.40404	NA	promoter-TSS (NM_001347119)	promoter-TSS (NM_001347119)	-306	NM_010255	14431	Mm.7329	NM_010255	ENSMUSG00000020150	Gamt	AA571402|Spintz1	guanidinoacetate methyltransferase	protein-coding	0.030000	0.567164			
ePOU_nocontrol_ChIP_peaks_unique-2448	chr6	61286149	61286349	+	2.40404	NA	intron (NM_183310, intron 1 of 10)	intron (NM_183310, intron 1 of 10)	-105439	NR_040287	100504262	Mm.438066	NR_040287		A730020E08Rik	-	RIKEN cDNA A730020E08 gene	ncRNA	0.005000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-1234	chr16	37384768	37384968	+	2.40404	NA	promoter-TSS (NM_001114611)	promoter-TSS (NM_001114611)	90	NM_001114612	207227	Mm.80170	NM_172440	ENSMUSG00000022829	Stxbp5l	9430094L02|A830015P08Rik|LLGL4|T2dm1|t2md1|tomosyn-2	syntaxin binding protein 5-like	protein-coding	0.095000	0.716418			
ePOU_nocontrol_ChIP_peaks_unique-1568	chr19	36256313	36256513	+	2.40404	NA	Intergenic	Lx9|LINE|L1	-91916	NM_001368690	76073	Mm.259180	NM_029508	ENSMUSG00000024805	Pcgf5	0610009F02Rik|1110054A01Rik|5830406C17Rik|5830443C21Rik|9530023M17Rik|AI324127	polycomb group ring finger 5	protein-coding	0.010000	0.363184		-47(TATACATATGCAAA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2554	chr7	19629313	19629513	+	2.40404	NA	promoter-TSS (NM_001290457)	promoter-TSS (NM_001290457)	25	NM_001290457	19698	Mm.1741	NM_009046	ENSMUSG00000002983	Relb	shep	avian reticuloendotheliosis viral (v-rel) oncogene related B	protein-coding	0.165000	0.800995			
ePOU_nocontrol_ChIP_peaks_unique-273	chr10	24398908	24399108	+	2.40404	NA	intron (NR_163910, intron 3 of 4)	intron (NR_163910, intron 3 of 4)	175491	NM_021509	59012	Mm.285934	NM_021509	ENSMUSG00000020000	Moxd1	3230402N08Rik|MNCb-5203	monooxygenase, DBH-like 1	protein-coding	0.005000	0.373134			-65(AATTTGACATGCAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2922	chr9	91060688	91060888	+	2.40404	NA	Intergenic	LTR81B|LTR|Gypsy	305011	NM_009573	22771	Mm.335350	NM_009573	ENSMUSG00000032368	Zic1	ZIC|ZNF201	zinc finger protein of the cerebellum 1	protein-coding	0.010000	0.383085			23(CTTTTGATATGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1591	chr19	46761198	46761398	+	2.40404	NA	promoter-TSS (NM_001102471)	promoter-TSS (NM_001102471)	-311	NM_001102471	94219	Mm.306903	NM_033569	ENSMUSG00000064105	Cnnm2	AU015877|AW048635|Acdp2|Clp2	cyclin M2	protein-coding	0.090000	0.656716			
ePOU_nocontrol_ChIP_peaks_unique-1105	chr15	51592306	51592506	+	2.40404	NA	Intergenic	Intergenic	-196796	NR_045092	100502643	Mm.131987	NR_045092	ENSMUSG00000115654	Gm19303	-	predicted gene, 19303	ncRNA	0.020000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-1104	chr15	51167245	51167445	+	2.40404	NA	Intergenic	Charlie2b|DNA|hAT-Charlie	228265	NR_045092	100502643	Mm.131987	NR_045092	ENSMUSG00000115654	Gm19303	-	predicted gene, 19303	ncRNA	0.005000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-2551	chr7	16052866	16053066	+	2.40404	NA	Intergenic	CpG	-18879	NM_001099277	666528	Mm.290718	NM_001099277	ENSMUSG00000078796	Zfp541	EG666528|Znf541	zinc finger protein 541	protein-coding	0.070000	0.582090			
ePOU_nocontrol_ChIP_peaks_unique-1008	chr14	75219140	75219340	+	2.40404	NA	intron (NM_008879, intron 14 of 16)	intron (NM_008879, intron 14 of 16)	-23047	NM_019775	56373	Mm.24242	NM_019775	ENSMUSG00000021999	Cpb2	1110032P04Rik|4930405E17Rik|AI255929|CPR|Cpu|TAFI	carboxypeptidase B2 (plasma)	protein-coding	0.000000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-2683	chr8	4613127	4613327	+	2.40404	NA	promoter-TSS (NM_145591)	promoter-TSS (NM_145591)	-31	NM_001368405	233987	Mm.102799	NM_145591	ENSMUSG00000058748	Zfp958	-	zinc finger protein 958	protein-coding	0.060000	0.611940			
ePOU_nocontrol_ChIP_peaks_unique-1777	chr2	130906238	130906438	+	2.40404	NA	promoter-TSS (NM_009730)	promoter-TSS (NM_009730)	58	NR_015523	613258	Mm.271990	NR_015523		A730017L22Rik	-	RIKEN cDNA A730017L22 gene	ncRNA	0.095000	0.661692			
ePOU_nocontrol_ChIP_peaks_unique-888	chr13	99220925	99221125	+	2.40404	NA	intron (NM_001004149, intron 1 of 4)	intron (NM_001004149, intron 1 of 4)	36202	NM_001004149	238803	Mm.343207	NM_001004149	ENSMUSG00000050919	Zfp366	DC-SCRIPT|Znf366	zinc finger protein 366	protein-coding	0.005000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-2662	chr7	127244258	127244458	+	2.40404	NA	promoter-TSS (NM_177362)	promoter-TSS (NM_177362)	-168	NM_177362	244216	Mm.41038	NM_177362	ENSMUSG00000054716	Zfp771	G630024C07Rik|Znf771	zinc finger protein 771	protein-coding	0.075000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-2573	chr7	38019143	38019343	+	2.40404	NA	5' UTR (NM_011274, exon 1 of 11)	5' UTR (NM_011274, exon 1 of 11)	309	NM_011274	19777	Mm.387220	NM_011274	ENSMUSG00000030421	Uri1	C80913|NNX3|Rmp	URI1, prefoldin-like chaperone	protein-coding	0.120000	0.706468			
ePOU_nocontrol_ChIP_peaks_unique-2585	chr7	46801869	46802069	+	2.40404	NA	intron (NM_001360076, intron 3 of 15)	intron (NM_001360076, intron 3 of 15)	5298	NM_001291075	14884	Mm.22700	NM_008186	ENSMUSG00000006599	Gtf2h1	62kDa|AW743425|AW822074|BTF2 p62|C77871|p62	general transcription factor II H, polypeptide 1	protein-coding	0.005000	0.303483			-92(ATTTTAATTAGAATAA,-,0.00),-86(ATTAGAATAACAGATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1702	chr2	70127734	70127934	+	2.40404	NA	intron (NM_177376, intron 8 of 34)	intron (NM_177376, intron 8 of 34)	88708	NM_177376	329421	Mm.99648	NM_177376	ENSMUSG00000042064	Myo3b	A430065P19Rik	myosin IIIB	protein-coding	0.035000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-1349	chr17	33760052	33760252	+	2.40404	NA	intron (NM_008997, intron 1 of 4)	CpG	334	NM_008997	19326	Mm.387587	NM_008997	ENSMUSG00000077450	Rab11b	A730055L17Rik	RAB11B, member RAS oncogene family	protein-coding	0.080000	0.636816			
ePOU_nocontrol_ChIP_peaks_unique-690	chr12	54823028	54823228	+	2.40404	NA	Intergenic	Intergenic	-27466	NM_026998	72183	Mm.28240	NM_026998	ENSMUSG00000005656	Snx6	2010006G21Rik|2610032J07Rik|2810425K19Rik|AU018928|C85963	sorting nexin 6	protein-coding	0.015000	0.388060			
merged_common-185	chr4	145066713	145066913	+	2.40404	NA	intron (NM_001276465, intron 57 of 69)	intron (NM_001276465, intron 57 of 69)	123853	NM_001276502	230895	Mm.240310	NM_001033190	ENSMUSG00000020220	Vps13d	-	vacuolar protein sorting 13D	protein-coding	0.010000	0.402985			13(CTTAGCATAGGAATGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-694	chr12	58441673	58441873	+	2.40404	NA	Intergenic	Intergenic	-172515	NM_025809	66864	Mm.280563	NM_025809	ENSMUSG00000045930	Clec14a	1200003C23Rik|AI642649	C-type lectin domain family 14, member a	protein-coding	0.000000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-2936	chr9	103156628	103156828	+	2.40404	NA	intron (NM_173781, intron 2 of 7)	intron (NM_173781, intron 2 of 7)	44654	NM_173781	270192	Mm.490252	NM_173781	ENSMUSG00000032549	Rab6b	9630015C03|AI844641|C330006L04Rik|D9Bwg0185e	RAB6B, member RAS oncogene family	protein-coding	0.000000	0.343284			-12(CAATTATGATTCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1080	chr15	32488719	32488919	+	2.40404	NA	intron (NM_009154, intron 5 of 22)	intron (NM_009154, intron 5 of 22)	244006	NM_009154	20356	Mm.260374	NM_009154	ENSMUSG00000022231	Sema5a	5930434A13|9130201M22Rik|AI464145|Semaf|semF	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	protein-coding	0.000000	0.328358			
ePOU_nocontrol_ChIP_peaks_unique-2799	chr8	108808847	108809047	+	2.40404	NA	intron (NM_007496, intron 3 of 9)	intron (NM_007496, intron 3 of 9)	94303	NM_007496	11906	Mm.416972	NM_007496	ENSMUSG00000038872	Zfhx3	A230102L03Rik|Atbf1|Sci|WBP9|mKIAA4228	zinc finger homeobox 3	protein-coding	0.005000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-1271	chr16	74282914	74283114	+	2.40404	NA	intron (NM_175549, intron 2 of 27)	intron (NM_175549, intron 2 of 27)	59053	NR_030464	751561		NR_030464	ENSMUSG00000104758	Mir691	Mirn691|mir-691|mmu-mir-691	microRNA 691	ncRNA	0.010000	0.343284	28(TATGCATATTTCATC,+,0.00),28(TATGCATATTTCATC,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2043	chr4	3994139	3994339	+	2.40404	NA	Intergenic	Intergenic	25424	NM_181989	242285	Mm.98096	NM_181989	ENSMUSG00000028236	Sdr16c5	Rdhe2|Scdr9	short chain dehydrogenase/reductase family 16C, member 5	protein-coding	0.000000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-1589	chr19	46396764	46396964	+	2.40404	NA	promoter-TSS (NM_015752)	promoter-TSS (NM_015752)	-32	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	SUFU negative regulator of hedgehog signaling	protein-coding	0.065000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-2935	chr9	101065331	101065531	+	2.40404	NA	Intergenic	Intergenic	-9331	NM_001100451	77853	Mm.326206	NM_001100451	ENSMUSG00000066415	Msl2	E130103E02Rik|Msl2l1|Rnf184	MSL complex subunit 2	protein-coding	0.005000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-2074	chr4	41587081	41587281	+	2.40404	NA	intron (NM_175138, intron 1 of 19)	intron (NM_175138, intron 1 of 19)	17387	NM_175138	68922	Mm.79127	NM_175138	ENSMUSG00000061322	Dnaic1	1110066F04Rik|BB124644|Dnai1|b2b1526Clo	dynein, axonemal, intermediate chain 1	protein-coding	0.000000	0.388060			1(CATTTGACTTGCAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1025	chr14	100789873	100790073	+	2.40404	NA	Intergenic	Intergenic	410096	NM_029680	76627	Mm.31415	NM_029680	ENSMUSG00000042888	Prr30	1700110M21Rik	proline rich 30	protein-coding	0.005000	0.353234			-2(ATTTGCATTATAAAAT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2177	chr4	148644155	148644355	+	2.40404	NA	intron (NM_001368835, intron 1 of 11)	intron (NM_001368835, intron 1 of 11)	938	NM_001085505	230909	Mm.332067	NM_001085505	ENSMUSG00000070577	Gm572	b2b1167Clo	predicted gene 572	protein-coding	0.035000	0.527363			19(TATCTGCTTTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2839	chr9	20607594	20607794	+	2.40404	NA	intron (NR_033729, intron 1 of 2)	intron (NR_033729, intron 1 of 2)	219	NR_033729	66662	Mm.477847	NM_175110	ENSMUSG00000062470	Fbxl12os	5730577I03Rik	F-box and leucine-rich repeat protein 12, opposite strand	pseudo	0.070000	0.462687			37(TCTTATTTTTTTAAAT,+,0.00),45(TTTTAAATCACAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2754	chr8	71396878	71397078	+	2.40404	NA	5' UTR (NM_026636, exon 1 of 9)	5' UTR (NM_026636, exon 1 of 9)	123	NM_026636	68251	Mm.21749	NM_026636	ENSMUSG00000031820	Babam1	5430437P03Rik|Merit40	BRISC and BRCA1 A complex member 1	protein-coding	0.075000	0.606965			
ePOU_nocontrol_ChIP_peaks_unique-1863	chr3	30507344	30507544	+	2.40404	NA	intron (NM_001361034, intron 1 of 16)	intron (NM_001361034, intron 1 of 16)	2231	NM_021442	14013	Mm.56965	NM_007963	ENSMUSG00000027684	Mecom	D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1	MDS1 and EVI1 complex locus	protein-coding	0.045000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-2164	chr4	134853806	134854006	+	2.40404	NA	promoter-TSS (NM_001355499)	promoter-TSS (NM_001355499)	-561	NM_001355499	66146	Mm.99793	NM_025382	ENSMUSG00000028826	Maco1	1110007C24Rik|9230118A01Rik|AI317300|AI606104|C61|Tmem57	macoilin 1	protein-coding	0.100000	0.671642			
ePOU_nocontrol_ChIP_peaks_unique-2028	chr3	151072447	151072647	+	2.40404	NA	Intergenic	Intergenic	-48685	NR_039540	100628568		NR_039540	ENSMUSG00000092830	Mir3963	mmu-mir-3963|mu-mir-3963	microRNA 3963	ncRNA	0.000000	0.447761	-58(CATGAATAATGCATG,+,0.00),-58(CATGAATAATGCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2025	chr3	147947426	147947626	+	2.40404	NA	Intergenic	Intergenic	1007109	NM_001081298	99633	Mm.9776	NM_001081298	ENSMUSG00000028184	Adgrl2	AI450192|CIRL-2|Gm619|Lec1|Lphh1|Lphn2|mKIAA0786	adhesion G protein-coupled receptor L2	protein-coding	0.005000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-1377	chr17	67173235	67173435	+	2.40404	NA	intron (NM_008984, intron 2 of 30)	intron (NM_008984, intron 2 of 30)	-147100	NR_049205	100885844		NR_049205	ENSMUSG00000093508	Mir5709	Gm22041|mir-5709|mmu-mir-5709	microRNA 5709	ncRNA	0.010000	0.358209			13(ATTTAAAAAATAAAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1218	chr16	32278159	32278359	+	2.40404	NA	exon (NM_027355, exon 1 of 6)	exon (NM_027355, exon 1 of 6)	798	NM_027355	70238	Mm.228263	NM_027355	ENSMUSG00000014074	Rnf168	3110001H15Rik	ring finger protein 168	protein-coding	0.040000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-2491	chr6	100525494	100525694	+	2.40404	NA	Intergenic	Intergenic	-1806	NR_040525	73395	Mm.69413	NR_040525	ENSMUSG00000101553	1700049E22Rik	-	RIKEN cDNA 1700049E22 gene	ncRNA	0.005000	0.452736	-10(GATGCATAATTCATG,+,0.00),-10(GATGCATAATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2020	chr3	145924172	145924372	+	2.40404	NA	promoter-TSS (NM_009740)	promoter-TSS (NM_009740)	10	NM_009740	12042	Mm.239141	NM_009740	ENSMUSG00000028191	Bcl10	AI132454|BCL-10|C81403|CARMEN|CIPER|CLAP|ME10|cE10	B cell leukemia/lymphoma 10	protein-coding	0.080000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-468	chr11	40996816	40997016	+	2.40404	NA	Intergenic	L1M2|LINE|L1	-241630	NM_009831	12450	Mm.2103	NM_009831	ENSMUSG00000020326	Ccng1	AI314029	cyclin G1	protein-coding	0.000000	0.273632			
ePOU_nocontrol_ChIP_peaks_unique-2636	chr7	100371951	100372151	+	2.40404	NA	promoter-TSS (NM_001017985)	promoter-TSS (NM_001017985)	-155	NM_028292	72590	Mm.177502	NM_028292	ENSMUSG00000030718	Ppme1	1110069N17Rik|2700017M01Rik|PME-1|Pme1	protein phosphatase methylesterase 1	protein-coding	0.065000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-1971	chr3	103020377	103020577	+	2.40404	NA	promoter-TSS (NM_001310693)	promoter-TSS (NM_001310693)	-69	NM_001161854	229663	Mm.277713	NM_144901	ENSMUSG00000068823	Csde1	AA960392|BC016898|D3Jfr1|mKIAA0885|unr	cold shock domain containing E1, RNA binding	protein-coding	0.105000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-2422	chr6	43421819	43422019	+	2.40404	NA	intron (NM_001311111, intron 7 of 7)	intron (NM_001311111, intron 7 of 7)	-20510	NR_045988	319812	Mm.446393	NR_045988		9430018G01Rik	-	RIKEN cDNA 9430018G01 gene	ncRNA	0.000000	0.308458	-65(CATGCATTTTTCATT,+,0.00),-65(CATGCATTTTTCATT,-,0.00)		-93(CTCTGCATTACAAATG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2386	chr6	8209334	8209534	+	2.40404	NA	intron (NM_145374, intron 1 of 11)	CpG	207	NM_145374	252875	Mm.257151	NM_145374	ENSMUSG00000042447	Mios	C81488	meiosis regulator for oocyte development	protein-coding	0.140000	0.746269			
merged_common-236	chr9	70430932	70431132	+	2.40404	NA	intron (NM_001357494, intron 12 of 14)	intron (NM_001357494, intron 12 of 14)	-9478	NM_007630	12442	Mm.22592	NM_007630	ENSMUSG00000032218	Ccnb2	CycB2	cyclin B2	protein-coding	0.005000	0.313433			17(ATTAAAACCACAATGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1861	chr3	29735651	29735851	+	2.40404	NA	Intergenic	Intergenic	99007	NR_105796	102466637		NR_105796	ENSMUSG00000098315	Mir21b	Gm27951|mmu-mir-21b	microRNA 21b	ncRNA	0.005000	0.388060			-91(CTATTGTAATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-303	chr10	40258430	40258630	+	2.40404	NA	promoter-TSS (NR_002842)	promoter-TSS (NR_002842)	62	NR_002842	19850	Mm.424506	NR_002842		Rnu3a	-	U3A small nuclear RNA	snRNA	0.045000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-1806	chr2	148816555	148816755	+	2.40404	NA	Intergenic	Intergenic	-3444	NM_027024	69294	Mm.46167	NM_027024	ENSMUSG00000036924	Cst13	1700006C19Rik|Cymg1|Mtcg1	cystatin 13	protein-coding	0.005000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-2117	chr4	87752493	87752693	+	2.40404	NA	Intergenic	Intergenic	53730	NM_029931	70122	Mm.288898	NM_027326	ENSMUSG00000028496	Mllt3	2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3	protein-coding	0.000000	0.363184	16(CATGCATTATTTAGT,+,0.00),16(CATGCATTATTTAGT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2691	chr8	8940775	8940975	+	2.40404	NA	Intergenic	Intergenic	191413	NR_045854	71249	Mm.158635	NR_045854	ENSMUSG00000108848	4933430N04Rik	-	RIKEN cDNA 4933430N04 gene	ncRNA	0.000000	0.388060			68(TTTTAAAAGACAAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1951	chr3	89101952	89102152	+	2.40404	NA	promoter-TSS (NM_001253751)	promoter-TSS (NM_001253751)	-85	NM_001253751	110196	Mm.39472	NM_134469	ENSMUSG00000059743	Fdps	6030492I17Rik|AI256750|Fdpsl1|mKIAA1293	farnesyl diphosphate synthetase	protein-coding	0.050000	0.547264			
ePOU_nocontrol_ChIP_peaks_unique-453	chr11	35454879	35455079	+	2.40404	NA	intron (NM_011412, intron 4 of 35)	intron (NM_011412, intron 4 of 35)	-161837	NR_029799	723924		NR_029799	ENSMUSG00000065583	Mir218-2	Mirn218-2|mir-218-2	microRNA 218-2	ncRNA	0.020000	0.417910	-46(CATGAATTATTCATG,+,0.00),-46(CATGAATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2950	chr9	114322668	114322868	+	2.40404	NA	Intergenic	L1M2|LINE|L1	-7367	NM_007535	12046	Mm.378887	NM_007535	ENSMUSG00000053820	Bcl2a1c	A1-c	B cell leukemia/lymphoma 2 related protein A1c	protein-coding	0.005000	0.298507			
merged_common-61	chr12	52242943	52243143	+	2.40404	NA	intron (NM_029760, intron 6 of 10)	intron (NM_029760, intron 6 of 10)	145297	NM_029760	76826	Mm.244781	NM_029760	ENSMUSG00000035142	Nubpl	2410170E07Rik	nucleotide binding protein-like	protein-coding	0.000000	0.268657	44(TATGAATGATTGATG,+,0.00),44(TATGAATGATTGATG,-,0.00)	38(AATACATATGAATG,-,0.00)	-77(ATTTGCATGAAAAAAC,-,0.00),71(TATTTATCATTTTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1479	chr18	62395553	62395753	+	2.40404	NA	intron (NM_001364958, intron 1 of 6)	intron (NM_001364958, intron 1 of 6)	54648	NM_001364957	15562	Mm.20440	NM_008313	ENSMUSG00000026322	Htr4	5-HT-4|5-HT4|5-HT<4L>|5HTR4	5 hydroxytryptamine (serotonin) receptor 4	protein-coding	0.015000	0.348259			60(ATTTGAATGAACAACT,-,0.00)
Oct4_nocontrol_ChIP_peaks_unique-84	chr6	134035277	134035477	+	2.40404	NA	promoter-TSS (NM_001303102)	promoter-TSS (NM_001303102)	-323	NM_007961	14011	Mm.269995	NM_007961	ENSMUSG00000030199	Etv6	AW123102|AW557856|Tel	ets variant 6	protein-coding	0.065000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-2749	chr8	70118812	70119012	+	2.40404	NA	intron (NM_007789, intron 1 of 14)	intron (NM_007789, intron 1 of 14)	1932	NM_007789	13004	Mm.268079	NM_007789	ENSMUSG00000002341	Ncan	C230035B04|Cspg3|Cspg3-rs|Tgfbit	neurocan	protein-coding	0.010000	0.542289	-18(CATGAATGATGCATT,+,0.00),-18(CATGAATGATGCATT,-,0.00)	2(CATGTATATGCAAG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1469	chr18	55546272	55546472	+	2.40404	NA	Intergenic	Intergenic	-553781	NM_001360787	269023	Mm.192984	NM_175751	ENSMUSG00000052713	Zfp608	4932417D18Rik|D430007A19Rik|Znf608	zinc finger protein 608	protein-coding	0.020000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-714	chr12	76695224	76695424	+	2.40404	NA	intron (NM_013675, intron 1 of 35)	intron (NM_013675, intron 1 of 35)	15223	NM_013675	20741	Mm.32881	NM_013675	ENSMUSG00000021061	Sptb	AI842465|D330027P03Rik|Gm1301|Spnb-1|Spnb1|ja|jaundiced|mKIAA4219	spectrin beta, erythrocytic	protein-coding	0.020000	0.537313			43(GTTTTGCAATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1571	chr19	37175255	37175455	+	2.40404	NA	intron (NM_001290827, intron 1 of 10)	intron (NM_001290827, intron 1 of 10)	708	NM_001290826	208922	Mm.391176	NM_198300	ENSMUSG00000039652	Cpeb3	4831444O18Rik|CPE-BP3|mKIAA0940	cytoplasmic polyadenylation element binding protein 3	protein-coding	0.035000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-1858	chr3	27063988	27064188	+	2.40404	NA	Intergenic	Intergenic	89766	NM_007900	13605	Mm.261453	NM_007900	ENSMUSG00000027699	Ect2	AI528536	ect2 oncogene	protein-coding	0.025000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-1750	chr2	114829746	114829946	+	2.40404	NA	Intergenic	Intergenic	-174882	NM_025675	66632	Mm.117809	NM_025675	ENSMUSG00000057147	Dph6	5730421E18Rik|Atpbd4	diphthamine biosynthesis 6	protein-coding	0.000000	0.323383			-64(ATTTCCATGAGAAAGT,-,0.00),-35(ATTTGCATAAAATTTA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1436	chr18	24957030	24957230	+	2.40404	NA	intron (NM_175276, intron 5 of 26)	intron (NM_175276, intron 5 of 26)	208835	NM_001142697	66648	Mm.263189	NM_001004361	ENSMUSG00000024269	Tpgs2	5730437P09Rik|5730494M16Rik|AI666318|Pgs2	tubulin polyglutamylase complex subunit 2	protein-coding	0.010000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-464	chr11	39792646	39792846	+	2.40404	NA	Intergenic	Intergenic	-402521	NR_126439	75315	Mm.461295	NR_126439		4930553C11Rik	-	RIKEN cDNA 4930553C11 gene	ncRNA	0.015000	0.353234	8(GATGAATTATGCATT,+,0.00),8(GATGAATTATGCATT,-,0.00)		20(ATTTTTACATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-721	chr12	78861402	78861602	+	2.40404	NA	promoter-TSS (NM_026114)	promoter-TSS (NM_026114)	136	NM_023721	73834	Mm.311549	NM_023721	ENSMUSG00000021114	Atp6v1d	1110004P10Rik|Atp6m|VATD|Vma8	ATPase, H+ transporting, lysosomal V1 subunit D	protein-coding	0.080000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-1903	chr3	58876159	58876359	+	2.40404	NA	intron (NM_153384, intron 1 of 3)	RCHARR1|DNA|hAT-Charlie	8953	NM_153386	229320	Mm.131502	NM_153384	ENSMUSG00000043850	Clrn1	A130002D11Rik|USH3|Ush3a|clarin-1	clarin 1	protein-coding	0.000000	0.273632			-17(TTATTATTATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1229	chr16	34623075	34623275	+	2.40404	NA	Intergenic	L1M4|LINE|L1	-28036	NM_030744	76378	Mm.23515	NM_030744	ENSMUSG00000022832	Ropn1	1700008N21Rik|ODF6|RHPNAP1|Rppn|ropporin	ropporin, rhophilin associated protein 1	protein-coding	0.000000	0.303483			-22(TCATATTCATTGAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-579	chr11	99076867	99077067	+	2.40404	NA	intron (NM_172564, intron 4 of 12)	intron (NM_172564, intron 4 of 12)	12339	NM_172564	217169	Mm.262067	NM_172564	ENSMUSG00000017607	Tns4	9930017A07Rik|AA589547|AU016405|Cten	tensin 4	protein-coding	0.010000	0.492537			
ePOU_nocontrol_ChIP_peaks_unique-1006	chr14	74627409	74627609	+	2.40404	NA	Intergenic	L1_Mur3|LINE|L1	-13365	NM_172812	15558	Mm.214351	NM_172812	ENSMUSG00000034997	Htr2a	5-HT-2|5-HT-2A|E030013E04|Htr-2|Htr2	5-hydroxytryptamine (serotonin) receptor 2A	protein-coding	0.005000	0.358209			-30(ACATTCAGATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1381	chr17	73107800	73108000	+	2.40404	NA	promoter-TSS (NM_001177968)	promoter-TSS (NM_001177968)	-85	NM_001081071	225010	Mm.329194	NM_001081071	ENSMUSG00000054469	Lclat1	AI181996|Agpat8|Alcat1|Gm91|Lycat	lysocardiolipin acyltransferase 1	protein-coding	0.075000	0.656716			
ePOU_nocontrol_ChIP_peaks_unique-1832	chr2	168207186	168207386	+	2.40404	NA	promoter-TSS (NM_001310088)	promoter-TSS (NM_001310088)	-174	NM_009628	11538	Mm.201322	NM_009628	ENSMUSG00000051149	Adnp	AA589558|mKIAA0784	activity-dependent neuroprotective protein	protein-coding	0.050000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-2247	chr5	52190153	52190353	+	2.40404	NA	promoter-TSS (NR_015537)	promoter-TSS (NR_015537)	293	NM_007839	13204	Mm.993	NM_007839	ENSMUSG00000029169	Dhx15	DBP1|DEAH9|Ddx15|HRH2|mDEAH9	DEAH (Asp-Glu-Ala-His) box polypeptide 15	protein-coding	0.110000	0.711443			
ePOU_nocontrol_ChIP_peaks_unique-1307	chr17	6449750	6449950	+	2.40404	NA	non-coding (NR_033520, exon 1 of 10)	non-coding (NR_033520, exon 1 of 10)	1144	NR_033520	547127	Mm.297552	NM_001045538		Tmem181b-ps	Tmem181b	transmembrane protein 181B, pseudogene	pseudo	0.010000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-872	chr13	90512896	90513096	+	2.40404	NA	Intergenic	Intergenic	392359	NM_001145879	435376	Mm.292579	NM_001145879	ENSMUSG00000078958	Atp6ap1l	EG435376	ATPase, H+ transporting, lysosomal accessory protein 1-like	protein-coding	0.005000	0.373134	-9(TTTGAATTATTCATG,+,0.00),-9(TTTGAATTATTCATG,-,0.00)		65(CATTAGTAATGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1961	chr3	96685685	96685885	+	2.40404	NA	intron (NM_001356539, intron 10 of 12)	intron (NM_001356539, intron 10 of 12)	-10590	NM_146135	229615	Mm.1635	NM_018812	ENSMUSG00000028101	Pias3	Pias3l	protein inhibitor of activated STAT 3	protein-coding	0.020000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-1087	chr15	36775867	36776067	+	2.40404	NA	intron (NM_001356569, intron 4 of 6)	B3|SINE|B2	14965	NM_001253807	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding	0.010000	0.457711			85(ACATTCTTATACAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2302	chr5	103161631	103161831	+	2.40404	NA	intron (NM_001081567, intron 2 of 13)	intron (NM_001081567, intron 2 of 13)	49603	NM_001310683	26414	Mm.39253	NM_009158	ENSMUSG00000046709	Mapk10	C230008H04Rik|JNK3|JNK3B1|JNK3B2|SAPK(beta)|Serk2|p493F12|p54bSAPK	mitogen-activated protein kinase 10	protein-coding	0.015000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-1744	chr2	110172230	110172430	+	2.40404	NA	Intergenic	Intergenic	-121851	NR_040508	75517	Mm.363927	NR_040508	ENSMUSG00000086186	Ccdc34os	1700024P03Rik	coiled-coil domain containing 34, opposite strand	ncRNA	0.000000	0.383085			8(GTATTCTGATGAAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-936	chr14	24330534	24330734	+	2.40404	NA	Intergenic	RLTR13B1|LTR|ERVK	37270	NM_001033214	105418	Mm.2077	NM_001033214	ENSMUSG00000038925	E330034G19Rik	AA415275|Zpac	RIKEN cDNA E330034G19 gene	protein-coding	0.015000	0.407960	-50(CATGAATAATGCAAT,+,0.00),-50(CATGAATAATGCAAT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1119	chr15	63172217	63172417	+	2.40404	NA	Intergenic	Intergenic	307291	NR_045279	432958	Mm.255105	NR_045279	ENSMUSG00000115520	Gm20740	-	predicted gene, 20740	ncRNA	0.000000	0.318408			
ePOU_nocontrol_ChIP_peaks_unique-2494	chr6	101534261	101534461	+	2.40404	NA	Intergenic	Intergenic	-156464	NM_018884	55983	Mm.321654	NM_018884	ENSMUSG00000035357	Pdzrn3	1110020C07Rik|AI429718|AL023082|LNX3|SEMACAP3|Semcap3	PDZ domain containing RING finger 3	protein-coding	0.010000	0.412935			80(TTTTAAAAGAGAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-977	chr14	60251202	60251402	+	2.40404	NA	5' UTR (NM_001362440, exon 1 of 15)	5' UTR (NM_001362440, exon 1 of 15)	177	NM_001362440	71844	Mm.258051	NM_170591	ENSMUSG00000114797	Nupl1	1700017F11Rik|Nup58|mKIAA0410	nucleoporin like 1	protein-coding	0.085000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-1077	chr15	28110037	28110237	+	2.40404	NA	Intergenic	L1ME1|LINE|L1	-84289	NM_001081302	223435	Mm.485422	NM_001081302	ENSMUSG00000022263	Trio	6720464I07Rik|AA408740|Solo	triple functional domain (PTPRF interacting)	protein-coding	0.025000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-874	chr13	92365364	92365564	+	2.40404	NA	intron (NM_010049, intron 3 of 5)	intron (NM_010049, intron 3 of 5)	-10461	NM_001311120	17686	Mm.343101	NM_010829	ENSMUSG00000014850	Msh3	D13Em1|Rep-3|Rep3	mutS homolog 3	protein-coding	0.005000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-2315	chr5	109549802	109550002	+	2.40404	NA	Intergenic	Intergenic	9091	NM_001164735	57914	Mm.35771	NM_016715	ENSMUSG00000033467	Crlf2	CRLM2|Ly114|Tpte2|Tslpr	cytokine receptor-like factor 2	protein-coding	0.020000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-260	chr10	16874262	16874462	+	2.40404	NA	Intergenic	Intergenic	221420	NR_038020	100504235	Mm.84044	NR_038020	ENSMUSG00000101969	Gm20125	-	predicted gene, 20125	ncRNA	0.005000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-722	chr12	78911807	78912007	+	2.40404	NA	Intergenic	Intergenic	-4969	NM_013738	27260	Mm.103380	NM_013738	ENSMUSG00000021118	Plek2	-	pleckstrin 2	protein-coding	0.035000	0.601990			
ePOU_nocontrol_ChIP_peaks_unique-566	chr11	93955771	93955971	+	2.40404	NA	promoter-TSS (NM_001077529)	promoter-TSS (NM_001077529)	-88	NM_001077529	18103	Mm.1260	NM_008705	ENSMUSG00000020857	Nme2	NM23-H2|NM23B|nm23-M2	NME/NM23 nucleoside diphosphate kinase 2	protein-coding	0.100000	0.671642			
ePOU_nocontrol_ChIP_peaks_unique-873	chr13	92354646	92354846	+	2.40404	NA	promoter-TSS (NM_010049)	promoter-TSS (NM_010049)	-37	NM_010049	13361	Mm.23695	NM_010049	ENSMUSG00000021707	Dhfr	8430436I03Rik|AA607882|AI662710|AW555094	dihydrofolate reductase	protein-coding	0.105000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-1232	chr16	37115106	37115306	+	2.40404	NA	3' UTR (NM_001114611, exon 26 of 26)	3' UTR (NM_001114611, exon 26 of 26)	103420	NM_001159369	77782	Mm.259114	NM_029977	ENSMUSG00000034206	Polq	A430110D14Rik	polymerase (DNA directed), theta	protein-coding	0.005000	0.313433			75(AATTTTTCATGCAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2795	chr8	106415323	106415523	+	2.40404	NA	promoter-TSS (NM_001368328)	promoter-TSS (NM_001368328)	96	NM_001368328	22751	Mm.295582	NM_011764	ENSMUSG00000031907	Zfp90	6430515L01Rik|KRAB17|NK10|Zfp64|Zfp83|mKIAA1954	zinc finger protein 90	protein-coding	0.095000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-754	chr12	99978877	99979077	+	2.40404	NA	intron (NM_001164426, intron 2 of 2)	RLTR13B4|LTR|ERVK	14478	NM_001164426	217826	Mm.312335	NM_146037	ENSMUSG00000045404	Kcnk13	BB085247|F730021E22Rik|Gm1570|Gm1685	potassium channel, subfamily K, member 13	protein-coding	0.010000	0.412935	-43(CATGAATAATGCATT,+,0.00),-43(CATGAATAATGCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1915	chr3	66521360	66521560	+	2.40404	NA	Intergenic	L1MC2|LINE|L1	-224623	NM_145820	72789	Mm.443526	NM_028357	ENSMUSG00000027831	Veph1	2810471M23Rik|Veph	ventricular zone expressed PH domain-containing 1	protein-coding	0.000000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-2119	chr4	88301047	88301247	+	2.40404	NA	intron (NM_001081184, intron 19 of 43)	intron (NM_001081184, intron 19 of 43)	137779	NM_025760	66775	Mm.386788	NM_025760	ENSMUSG00000028497	Hacd4	4933428I03Rik|Hcad4|Ptplad2	3-hydroxyacyl-CoA dehydratase 4	protein-coding	0.015000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-2379	chr5	149353255	149353455	+	2.40404	NA	Intergenic	Intergenic	-58394	NM_027519	70717	Mm.252139	NM_027519	ENSMUSG00000029659	Medag	6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3	mesenteric estrogen dependent adipogenesis	protein-coding	0.030000	0.601990			
ePOU_nocontrol_ChIP_peaks_unique-1503	chr18	79207316	79207516	+	2.40404	NA	Intergenic	Intergenic	-98025	NM_053099	240427	Mm.312871	NM_053099	ENSMUSG00000024548	Setbp1	C130092E12|Seb|mKIAA0437	SET binding protein 1	protein-coding	0.005000	0.358209	83(CATGCATTATTAATA,+,0.00),83(CATGCATTATTAATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1093	chr15	39646766	39646966	+	2.40404	NA	intron (NM_053271, intron 22 of 26)	intron (NM_053271, intron 22 of 26)	-12645	NM_001256384	116838	Mm.309296	NM_053271	ENSMUSG00000037386	Rims2	2810036I15Rik|AW048769|RIM2|Rab3ip2|Rim2(+40A)|Rim2(+44A)|Rim2(+4A)|Serg2|Syt3-rs|mKIAA0751	regulating synaptic membrane exocytosis 2	protein-coding	0.000000	0.462687			-42(GCATTGTACTGTAAAT,+,0.00),-12(GCATTGTACTGTAAAT,+,0.00),18(GCATTGTACTGTAAAT,+,0.00),48(GCATTGTACTGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2513	chr6	121349961	121350161	+	2.40404	NA	intron (NM_133661, intron 2 of 14)	L1MB3|LINE|L1	3364	NM_133661	14411	Mm.274506	NM_133661	ENSMUSG00000030109	Slc6a12	BGT1|GAT-2|GAT2|Gabt2	solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12	protein-coding	0.015000	0.427861	-55(CATGTTTAATGCATA,+,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2449	chr6	61492550	61492750	+	2.40404	NA	intron (NM_183310, intron 5 of 10)	intron (NM_183310, intron 5 of 10)	-311840	NR_040287	100504262	Mm.438066	NR_040287		A730020E08Rik	-	RIKEN cDNA A730020E08 gene	ncRNA	0.010000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-367	chr10	91535380	91535580	+	2.40404	NA	Intergenic	Intergenic	-314861	NR_151510	102633753	Mm.416936	NR_151510		4930534H03Rik	-	RIKEN cDNA 4930534H03 gene	ncRNA	0.005000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-123	chr1	118459262	118459462	+	2.40404	NA	promoter-TSS (NR_027901)	promoter-TSS (NR_027901)	-97	NR_027901	68204	Mm.443536	NR_027901	ENSMUSG00000107722	2900060B14Rik	-	RIKEN cDNA 2900060B14 gene	ncRNA	0.055000	0.557214			
merged_common-222	chr7	127777090	127777290	+	2.40404	NA	promoter-TSS (NM_178029)	promoter-TSS (NM_178029)	-199	NM_178029	233904	Mm.435494	NM_010940	ENSMUSG00000042308	Setd1a	BC010250|KMT2F|Nsccn1|mKIAA0339|mNSC1	SET domain containing 1A	protein-coding	0.100000	0.706468			
ePOU_nocontrol_ChIP_peaks_unique-2170	chr4	137593861	137594061	+	2.40404	NA	promoter-TSS (NM_130879)	promoter-TSS (NM_130879)	-211	NM_130879	170707	Mm.218478	NM_130879	ENSMUSG00000043411	Usp48	2810449C13Rik|AI115503|BC021769|D330022K21Rik|Usp31	ubiquitin specific peptidase 48	protein-coding	0.070000	0.562189			
Oct4_nocontrol_ChIP_peaks_unique-14	chr10	80702375	80702575	+	2.40404	NA	promoter-TSS (NM_027829)	promoter-TSS (NM_027829)	-218	NM_027829	71564	Mm.35802	NM_027829	ENSMUSG00000055862	Izumo4	9030607L17Rik|AI550407	IZUMO family member 4	protein-coding	0.045000	0.562189			
ePOU_nocontrol_ChIP_peaks_unique-1943	chr3	84672852	84673052	+	2.40404	NA	intron (NM_177260, intron 1 of 6)	intron (NM_177260, intron 1 of 6)	6760	NM_177260	320782	Mm.107370	NM_177260	ENSMUSG00000056498	Tmem154	9930117H01Rik	transmembrane protein 154	protein-coding	0.010000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-2496	chr6	104062079	104062279	+	2.40404	NA	Intergenic	Intergenic	-97495	NR_144494	100846987		NR_144494		Pou5f1-rs5	Gm21054|Oct4P5|Otf3-rs5|Otf3e	POU domain, class 5, transcription factor 1, related sequence 5	pseudo	0.000000	0.338308	-73(TATGAAATATGTATG,+,0.00),-73(TATGAAATATGTATG,-,0.00),64(AATGAATAATGCATT,+,0.00),64(AATGAATAATGCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-978	chr14	60403249	60403449	+	2.40404	NA	Intergenic	Intergenic	25657	NM_028113	72125	Mm.275499	NM_028113	ENSMUSG00000021986	Amer2	2600011E07Rik|Fam123a	APC membrane recruitment 2	protein-coding	0.000000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-779	chr12	119671703	119671903	+	2.40404	NA	Intergenic	Intergenic	228393	NM_001163136	238455	Mm.31376	NM_001163136	ENSMUSG00000041886	Macc1	4732474O15Rik|Gm267	metastasis associated in colon cancer 1	protein-coding	0.000000	0.407960	47(AATGAATAATGCAAT,+,0.00),47(AATGAATAATGCAAT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-240	chr10	3480745	3480945	+	2.40404	NA	Intergenic	Intergenic	-59429	NM_027391	70337	Mm.24153	NM_027391	ENSMUSG00000019762	Iyd	0610009A07Rik|AI265638|Dehal1|IYD-1	iodotyrosine deiodinase	protein-coding	0.000000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-1532	chr19	9899534	9899734	+	2.40404	NA	promoter-TSS (NM_016692)	promoter-TSS (NM_016692)	-145	NM_001369356	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding	0.080000	0.552239			
ePOU_nocontrol_ChIP_peaks_unique-2488	chr6	99635772	99635972	+	2.40404	NA	intron (NM_025829, intron 5 of 6)	MER2|DNA|TcMar-Tigger	30899	NM_025829	66892	Mm.32889	NM_025829	ENSMUSG00000093661	Eif4e3	1300018P11Rik|AI451927|eIF4E-3	eukaryotic translation initiation factor 4E member 3	protein-coding	0.020000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-1216	chr16	31290966	31291166	+	2.40404	NA	Intergenic	Intergenic	-15789	NM_025800	66849	Mm.291593	NM_025800	ENSMUSG00000047714	Ppp1r2	0610025N14Rik|2310007G06Rik|4930440J04Rik|5430408E15Rik|D16Ertd248e|I-2|IPP-2	protein phosphatase 1, regulatory inhibitor subunit 2	protein-coding	0.015000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-1779	chr2	130953443	130953643	+	2.40404	NA	intron (NM_009730, intron 6 of 28)	B3|SINE|B2	47048	NM_009730	11990	Mm.119936	NM_009730	ENSMUSG00000027312	Atrn	AW558010|Mgca|mg	attractin	protein-coding	0.015000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-1684	chr2	55205012	55205212	+	2.40404	NA	Intergenic	Intergenic	-230858	NM_001304810	16519	Mm.5127	NM_008426	ENSMUSG00000026824	Kcnj3	GIRK-1|GIRK1|Kcnf3|Kir3.1	potassium inwardly-rectifying channel, subfamily J, member 3	protein-coding	0.000000	0.353234			-19(ATTTCCAAGTCAAATG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2244	chr5	48658110	48658310	+	2.40404	NA	intron (NM_001199244, intron 1 of 7)	intron (NM_001199244, intron 1 of 7)	-58528	NM_001199245	80334	Mm.160172	NM_030265	ENSMUSG00000029088	Kcnip4	AV032399|Calp|Calp250|KChIP4|KChIP4a	Kv channel interacting protein 4	protein-coding	0.000000	0.328358			-42(CTTTGAATAACAAAAT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-730	chr12	80945522	80945722	+	2.40404	NA	promoter-TSS (NR_045057)	promoter-TSS (NR_045057)	123	NM_001347416	20384	Mm.43331	NM_009159	ENSMUSG00000021134	Srsf5	Sfrs5	serine/arginine-rich splicing factor 5	protein-coding	0.060000	0.567164			
ePOU_nocontrol_ChIP_peaks_unique-1372	chr17	57032138	57032338	+	2.40404	NA	promoter-TSS (NM_010613)	promoter-TSS (NM_010613)	-731	NM_010613	16549	Mm.34296	NM_010613	ENSMUSG00000007670	Khsrp	6330409F21Rik|Fbp2|Fubp2|Ksrp	KH-type splicing regulatory protein	protein-coding	0.045000	0.616915			
ePOU_nocontrol_ChIP_peaks_unique-2806	chr8	116978819	116979019	+	2.40404	NA	promoter-TSS (NM_027103)	promoter-TSS (NM_027103)	40	NM_027103	69528	Mm.272846	NM_027103	ENSMUSG00000031847	1700030J22Rik	-	RIKEN cDNA 1700030J22 gene	protein-coding	0.095000	0.671642			
ePOU_nocontrol_ChIP_peaks_unique-518	chr11	69671498	69671698	+	2.40404	NA	intron (NM_144958, intron 1 of 10)	CpG	825	NM_144958	13681	Mm.26680	NM_144958	ENSMUSG00000059796	Eif4a1	BM-010|Ddx2a|Eif4	eukaryotic translation initiation factor 4A1	protein-coding	0.105000	0.671642			
ePOU_nocontrol_ChIP_peaks_unique-911	chr13	114346079	114346279	+	2.40404	NA	intron (NM_010887, intron 2 of 4)	intron (NM_010887, intron 2 of 4)	41915	NM_010887	17993	Mm.253142	NM_010887	ENSMUSG00000021764	Ndufs4	6720411N02Rik|C1-18k	NADH:ubiquinone oxidoreductase core subunit S4	protein-coding	0.000000	0.263682		-55(TATGTATATGCATG,+,0.00),-55(TATGTATATGCATG,-,0.00),-25(TATGTATATGCATA,+,0.00),-25(TATGTATATGCATA,-,0.00),-19(TATGCATATTTACT,+,0.00),-19(TATGCATATTTACT,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-918	chr14	8300001	8300201	+	2.40404	NA	intron (NM_001360338, intron 2 of 3)	intron (NM_001360338, intron 2 of 3)	9676	NM_183187	268709	Mm.256058	NM_183187	ENSMUSG00000021750	Fam107a	DRR1	family with sequence similarity 107, member A	protein-coding	0.005000	0.338308	78(TATGAATATTTCATA,+,0.00),78(TATGAATATTTCATA,-,0.00)		16(ATTTGCATATGAATCC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2292	chr5	92489931	92490131	+	2.40404	NA	intron (NM_007644, intron 1 of 11)	intron (NM_007644, intron 1 of 11)	15626	NM_007644	12492	Mm.297964	NM_007644	ENSMUSG00000029426	Scarb2	9330185J12Rik|Cd36l2|LGP85|LIMP II|LIMP-2|MLGP85	scavenger receptor class B, member 2	protein-coding	0.000000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-169	chr1	156819273	156819473	+	2.40404	NA	intron (NM_001159965, intron 16 of 19)	intron (NM_001159965, intron 16 of 19)	-19650	NM_028333	72713	Mm.389206	NM_028333	ENSMUSG00000033544	Angptl1	2810039D03Rik|ANG3|ANGPT3|ANGY|ARP1	angiopoietin-like 1	protein-coding	0.000000	0.388060			-66(TTTTACATGACAAAAT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-751	chr12	98884542	98884742	+	2.40404	NA	intron (NM_001081191, intron 2 of 43)	intron (NM_001081191, intron 2 of 43)	16842	NM_001081191	319670	Mm.390484	NM_001081191	ENSMUSG00000051166	Eml5	BC027154|C130068M19Rik	echinoderm microtubule associated protein like 5	protein-coding	0.005000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-696	chr12	60232512	60232712	+	2.40404	NA	Intergenic	Intergenic	-1013129	NM_001033156	70611	Mm.311026	NM_001033156	ENSMUSG00000035329	Fbxo33	5730501N20Rik|AI642135	F-box protein 33	protein-coding	0.000000	0.293532			
ePOU_nocontrol_ChIP_peaks_unique-1474	chr18	59860199	59860399	+	2.40404	NA	Intergenic	Intergenic	280669	NR_105773	102465182		NR_105773	ENSMUSG00000098287	Mir6355	Gm27473|mmu-mir-6355	microRNA 6355	ncRNA	0.020000	0.412935	-22(TATGCATAATGAAAA,-,0.00)		32(CTTTTATCATGCAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2590	chr7	54342896	54343096	+	2.40404	NA	Intergenic	Intergenic	-451107	NR_105746	102466619		NR_105746	ENSMUSG00000099176	Mir6238	Gm27982|mmu-mir-6238	microRNA 6238	ncRNA	0.005000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-1757	chr2	118549551	118549751	+	2.40404	NA	promoter-TSS (NM_138313)	promoter-TSS (NM_138313)	35	NM_138313	171543	Mm.210125	NM_138313	ENSMUSG00000040093	Bmf	AW260063|AW411872	BCL2 modifying factor	protein-coding	0.095000	0.671642			
ePOU_nocontrol_ChIP_peaks_unique-1602	chr19	53460505	53460705	+	2.40404	NA	intron (NR_028427, intron 2 of 9)	intron (NR_028427, intron 2 of 9)	4191	NR_028427	381232	Mm.248624	NR_028427		Mirt1	4833407H14Rik|5430437C04Rik|5830416P10Rik|Gm10758	myocardial infarction associated transcript 1	ncRNA	0.015000	0.462687			-37(CTACTCATATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-428	chr11	17211620	17211820	+	2.40404	NA	promoter-TSS (NM_025443)	promoter-TSS (NM_025443)	-131	NM_025443	66249	Mm.27831	NM_025443	ENSMUSG00000020116	Pno1	1810003N24Rik|AA407421|AU015468|AU019495|AU042323|Emi3|Imi3	partner of NOB1 homolog	protein-coding	0.050000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-394	chr10	115484269	115484469	+	2.40404	NA	intron (NM_010195, intron 4 of 17)	intron (NM_010195, intron 4 of 17)	-85617	NM_029982	77798	Mm.446685	NM_029982	ENSMUSG00000092210	A930009A15Rik	-	RIKEN cDNA A930009A15 gene	protein-coding	0.005000	0.353234			23(TTCTACATAACAAAGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-969	chr14	54575698	54575898	+	2.40404	NA	intron (NM_010590, intron 1 of 7)	CpG	1863	NM_010590	16475	Mm.100253	NM_010590	ENSMUSG00000022178	Ajuba	Jub	ajuba LIM protein	protein-coding	0.130000	0.756219			
ePOU_nocontrol_ChIP_peaks_unique-2399	chr6	23923723	23923923	+	2.40404	NA	Intergenic	Intergenic	46237	NM_207022	387347	Mm.377909	NM_207022	ENSMUSG00000043865	Tas2r118	Gm465|T2R16|T2R18|Tas2r16|Tas2r18|mGR18|mt2r40	taste receptor, type 2, member 118	protein-coding	0.000000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-2996	chrX	140848633	140848833	+	2.40404	NA	Intergenic	L1ME1|LINE|L1	-35300	NM_031381	83555	Mm.193025	NM_031381	ENSMUSG00000042386	Tex13b	4933403J23Rik|Tex13	testis expressed 13B	protein-coding	0.005000	0.348259			
merged_common-55	chr12	10239846	10240046	+	2.40404	NA	Intergenic	HAL1ME|LINE|L1	-130025	NM_001310582	70881	Mm.272843	NM_027588	ENSMUSG00000020622	Nt5c1b	4921514H13Rik|AIRP|CN-IB|cN1B	5'-nucleotidase, cytosolic IB	protein-coding	0.000000	0.368159			-48(ATTATAATGACAATAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-52	chr1	51958629	51958829	+	2.39843	NA	Intergenic	Intergenic	-28419	NM_001308266	20849	Mm.1550	NM_011487	ENSMUSG00000062939	Stat4	-	signal transducer and activator of transcription 4	protein-coding	0.005000	0.333333	-9(AATGAATAATGCAAA,+,0.00),-9(AATGAATAATGCAAA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2332	chr5	120894699	120894899	+	2.39843	NA	Intergenic	RLTR13B1|LTR|ERVK	-7186	NR_126529	23960	Mm.389688	NM_011852	ENSMUSG00000066861	Oas1g	AI449562|L2|Mmu-L|Mmu-L2|Oas1b|Oias-1|Oias1	2'-5' oligoadenylate synthetase 1G	protein-coding	0.000000	0.412935	-1(ATTGCATTATTCATG,+,0.00),-1(ATTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2474	chr6	86684444	86684644	+	2.39843	NA	promoter-TSS (NM_025665)	promoter-TSS (NM_025665)	-53	NM_025665	66618	Mm.182650	NM_025665	ENSMUSG00000001158	Snrnp27	2610209M04Rik|AI449063|AU022368|Ry1	small nuclear ribonucleoprotein 27 (U4/U6.U5)	protein-coding	0.085000	0.621891			
merged_common	chr1	16350887	16351087	+	2.39843	NA	intron (NM_001347045, intron 10 of 10)	Lx9|LINE|L1	168128	NM_001347044	29819	Mm.216257	NM_025303	ENSMUSG00000025920	Stau2	-	staufen double-stranded RNA binding protein 2	protein-coding	0.005000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-552	chr11	86544793	86544993	+	2.39843	NA	promoter-TSS (NM_028259)	promoter-TSS (NM_028259)	-86	NM_001363162	72508	Mm.394280	NM_028259	ENSMUSG00000020516	Rps6kb1	2610318I15Rik|AA959758|AI256796|AI314060|P70S6K1|S6K|S6K-beta-1|S6K1|p70 S6K-alpha|p70 S6KA|p70-S6K 1|p70/85s6k|p70s6k	ribosomal protein S6 kinase, polypeptide 1	protein-coding	0.080000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-2086	chr4	53508441	53508641	+	2.39843	NA	intron (NM_133891, intron 3 of 15)	L1MB8|LINE|L1	68128	NM_001159633	100434	Mm.482207	NM_133891	ENSMUSG00000028412	Slc44a1	2210409B22Rik|4833416H08Rik|AW547365|CHTL1|CTL1|Cdw92	solute carrier family 44, member 1	protein-coding	0.000000	0.323383		-56(TTTAAATATGCATA,+,0.00),-50(TATGCATAAGGATT,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1159	chr15	95812339	95812539	+	2.39843	NA	intron (NM_175344, intron 1 of 19)	intron (NM_175344, intron 1 of 19)	17633	NR_155276	102634389	Mm.440563	NR_155276	ENSMUSG00000078648	LOC102634389	-	uncharacterized LOC102634389	ncRNA	0.015000	0.407960	-23(TATGCATAATTTAAA,-,0.00)		
merged_common-20	chr10	23271218	23271418	+	2.39843	NA	intron (NM_001347372, intron 2 of 18)	intron (NM_001347372, intron 2 of 18)	78572	NM_001347372	14051	Mm.332128	NM_010167	ENSMUSG00000010461	Eya4	B130023L16Rik	EYA transcriptional coactivator and phosphatase 4	protein-coding	0.015000	0.373134	-70(CATGAATTATTCATG,+,0.00),-70(CATGAATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1923	chr3	69723532	69723732	+	2.39843	NA	intron (NM_133787, intron 2 of 15)	intron (NM_133787, intron 2 of 15)	1577	NM_133787	97112	Mm.21062	NM_133787	ENSMUSG00000027787	Nmd3	C87860	NMD3 ribosome export adaptor	protein-coding	0.005000	0.343284			64(ATTAGCATGACAAAGT,-,0.00)
merged_common-65	chr12	71716185	71716385	+	2.39843	NA	Intergenic	MLTR25A|LTR|ERVK	-114783	NM_026102	208846	Mm.87417	NM_026102	ENSMUSG00000034574	Daam1	-	dishevelled associated activator of morphogenesis 1	protein-coding	0.005000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-2810	chr8	119159962	119160162	+	2.32437	NA	intron (NM_019707, intron 7 of 13)	intron (NM_019707, intron 7 of 13)	-184476	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding	0.025000	0.472637	-27(CATGAATAATGCATG,+,0.00),-27(CATGAATAATGCATG,-,0.00)		
merged_common-153	chr2	157236187	157236387	+	2.27868	NA	intron (NM_001039557, intron 10 of 24)	(CA)n|Simple_repeat|Simple_repeat	-31753	NM_011249	19650	Mm.244671	NM_011249	ENSMUSG00000027641	Rbl1	AW547426|PRB1|p107	RB transcriptional corepressor like 1	protein-coding	0.030000	0.388060		41(CATGCATATGTATA,+,0.00),41(CATGCATATGTATA,-,0.00),55(TATGCATATATATG,-,0.00),86(TATATATATTCATT,+,0.00)	
merged_common-127	chr18	63496380	63496580	+	2.27868	NA	Intergenic	Intergenic	-109297	NM_001039485	667742	Mm.158720	NM_172629	ENSMUSG00000041482	Piezo2	5930434P17|9030411M15Rik|9430028L06Rik|Fam38b|Fam38b2	piezo-type mechanosensitive ion channel component 2	protein-coding	0.010000	0.497512	-16(CATGCATTATTCATG,+,0.00),-16(CATGCATTATTCATG,-,0.00)	-59(AATGCATATGCATT,+,0.00),-59(AATGCATATGCATT,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-852	chr13	72614479	72614679	+	2.27014	NA	Intergenic	Intergenic	13985	NR_030701	328287	Mm.235072	NR_030701		Gm20554	D430050G20	predicted gene, 20554	ncRNA	0.005000	0.303483			30(ACTCTGTCATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-819	chr13	40182495	40182695	+	2.27014	NA	intron (NM_172143, intron 8 of 18)	intron (NM_172143, intron 8 of 18)	105416	NM_172143	218165	Mm.364096	NM_172143	ENSMUSG00000047094	Ofcc1	opo	orofacial cleft 1 candidate 1	protein-coding	0.000000	0.338308	-6(TATGAATTATGCATG,+,0.00),-6(TATGAATTATGCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2065	chr4	29119084	29119284	+	2.27014	NA	Intergenic	Intergenic	51105	NR_151693	102634169		NR_151693		Gm11917	-	predicted gene 11917	ncRNA	0.000000	0.318408			-98(TTTTACAAGACAATGA,-,0.00),62(TTTTTTTTTTTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-348	chr10	80159970	80160170	+	2.27014	NA	intron (NR_038088, intron 1 of 4)	CpG	-7769	NR_152857	12696	Mm.17898	NM_007705	ENSMUSG00000045193	Cirbp	Cirp|R74941	cold inducible RNA binding protein	protein-coding	0.090000	0.631841			
merged_common-199	chr5	114356897	114357097	+	2.27014	NA	exon (NM_001164573, exon 23 of 32)	exon (NM_001164573, exon 23 of 32)	182	NM_001368675	231646	Mm.238285	NM_146163	ENSMUSG00000066952	Myo1h	4631401O15Rik	myosin 1H	protein-coding	0.025000	0.557214			
ePOU_nocontrol_ChIP_peaks_unique-2297	chr5	102470450	102470650	+	2.27014	NA	Intergenic	Intergenic	-10841	NM_029270	231532	Mm.440191	NM_029270	ENSMUSG00000057315	Arhgap24	0610025G21Rik	Rho GTPase activating protein 24	protein-coding	0.000000	0.353234	-80(TATGCATTATTCATA,+,0.00),-80(TATGCATTATTCATA,-,0.00)		
merged_common-207	chr6	78735557	78735757	+	2.27014	NA	Intergenic	Intergenic	-266783	NM_011260	19695	Mm.252385	NM_011260	ENSMUSG00000030017	Reg3g	AI449515|REG-3-gamma|reg III-gamma	regenerating islet-derived 3 gamma	protein-coding	0.010000	0.313433			
merged_common-147	chr2	112378965	112379165	+	2.27014	NA	promoter-TSS (NM_024254)	promoter-TSS (NM_024254)	-146	NM_024254	72425	Mm.425091	NM_024254	ENSMUSG00000027132	Katnbl1	2410042D21Rik|AA166487|AA473307|AI467442	katanin p80 subunit B like 1	protein-coding	0.065000	0.552239		-66(AATGAATATTCATC,+,0.00),-66(AATGAATATTCATC,-,0.00)	-77(GTTTAAATGAAAATGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1490	chr18	69500336	69500536	+	2.27014	NA	intron (NM_001361127, intron 5 of 19)	intron (NM_001361127, intron 5 of 19)	154276	NM_001361128	21413	Mm.4269	NM_013685	ENSMUSG00000053477	Tcf4	5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19	transcription factor 4	protein-coding	0.025000	0.363184		-17(AATGAAAATTCATG,+,0.00),-17(AATGAAAATTCATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-841	chr13	56420063	56420263	+	2.27014	NA	Intergenic	L1MD1|LINE|L1	-18192	NM_177809	328258	Mm.482177	NM_177809	ENSMUSG00000021509	Slc25a48	AU042651|E230025K15	solute carrier family 25, member 48	protein-coding	0.025000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-2200	chr5	18087701	18087901	+	2.27014	NA	Intergenic	Intergenic	125231	NM_001081143	242851	Mm.332230	NM_001081143	ENSMUSG00000028777	Gnat3	Ggust|Gtn	guanine nucleotide binding protein, alpha transducing 3	protein-coding	0.000000	0.283582	1(CATGAAAAATGCAGA,+,0.00),21(GATACATAATTCATT,+,0.00),21(GATACATAATTCATT,-,0.00)		-84(ATCTCCATCAAAAAAA,-,0.00),-4(TTTTGCATGAAAAATG,-,0.00)
merged_common-136	chr2	27412130	27412330	+	2.26453	NA	intron (NM_009500, intron 1 of 27)	intron (NM_009500, intron 1 of 27)	15378	NR_133905	22325	Mm.179011	NM_009500	ENSMUSG00000009621	Vav2	2810040F13Rik|AI847175|Vav-2	vav 2 oncogene	protein-coding	0.015000	0.437811	3(CATGAATTATGGATG,+,0.00),3(CATGAATTATGGATG,-,0.00)		-67(GTTTTATTATGCACAT,+,0.00)
merged_common-150	chr2	150947820	150948020	+	2.20191	NA	intron (NM_207204, intron 17 of 23)	RLTR13B1|LTR|ERVK	38326	NM_001163476	69270	Mm.271603	NM_027014	ENSMUSG00000027454	Gins1	2810418N01Rik|Gins4|PSF1|mKIAA0186	GINS complex subunit 1 (Psf1 homolog)	protein-coding	0.010000	0.398010	46(ATTGCATTATTCATG,+,0.00),46(ATTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1622	chr2	9057626	9057826	+	2.19181	NA	Intergenic	Intergenic	-131789	NR_038180	73438	Mm.23558	NR_038180	ENSMUSG00000085580	1700061F12Rik	-	RIKEN cDNA 1700061F12 gene	ncRNA	0.015000	0.363184	10(TATGCATAATTCATG,+,0.00),10(TATGCATAATTCATG,-,0.00)		54(ATTTCCAATAAAATAG,-,0.00)
merged_common-26	chr10	90004352	90004552	+	2.18620	NA	intron (NM_001359241, intron 1 of 25)	intron (NM_001359241, intron 1 of 25)	130943	NM_001128086	77531	Mm.440605	NM_181398	ENSMUSG00000058589	Anks1b	AIDA-1|AIDA-1b|C030032C09Rik|E530015N03Rik|EB-1|Gm10937|Gm1555	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding	0.000000	0.358209	-72(AATGAATAATGCATT,+,0.00),-72(AATGAATAATGCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2840	chr9	21190539	21190739	+	2.12831	NA	intron (NM_001310750, intron 1 of 14)	intron (NM_001310750, intron 1 of 14)	-6066	NM_019798	18577	Mm.191749	NM_019798	ENSMUSG00000032177	Pde4a	D9Ertd60e|Dpde2	phosphodiesterase 4A, cAMP specific	protein-coding	0.010000	0.472637			
ePOU_nocontrol_ChIP_peaks_unique-1733	chr2	102934806	102935006	+	2.12831	NA	Intergenic	Intergenic	-33241	NM_009851	12505	Mm.423621	NM_009851	ENSMUSG00000005087	Cd44	AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1	CD44 antigen	protein-coding	0.010000	0.417910			-31(CCAGTGGTTTGCAAAT,+,0.00),1(ATTTGCAGGAGAATCA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-67	chr1	61095593	61095793	+	2.12831	NA	Intergenic	Intergenic	117779	NM_017480	54167	Mm.42044	NM_017480	ENSMUSG00000026009	Icos	AILIM|CCLP|CRP-1|H4|Ly115	inducible T cell co-stimulator	protein-coding	0.000000	0.383085		54(CATGTATATGAATA,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2334	chr5	122158098	122158298	+	2.12831	NA	promoter-TSS (NM_001370947)	promoter-TSS (NM_001370947)	-77	NR_156471	19047	Mm.280784	NM_013636	ENSMUSG00000004455	Ppp1cc	PP-1G|PP1|dis2m1	protein phosphatase 1 catalytic subunit gamma	protein-coding	0.175000	0.781095			
Oct4_nocontrol_ChIP_peaks_unique-53	chr2	5448554	5448754	+	2.12831	NA	intron (NM_001290375, intron 2 of 10)	intron (NM_001290375, intron 2 of 10)	69264	NR_030601	100124465		NR_030601	ENSMUSG00000078031	Mir466d	Mirn466d	microRNA 466d	ncRNA	0.000000	0.323383		-2(TATGCATATGCAAA,+,0.00),-2(TATGCATATGCAAA,-,0.00),23(CATGCATATTCAAA,+,0.00),23(CATGCATATTCAAA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1238	chr16	40290343	40290543	+	2.12831	NA	intron (NM_001361281, intron 1 of 8)	intron (NM_001361281, intron 1 of 8)	306079	NM_001361281	268890	Mm.310524	NM_175548	ENSMUSG00000061080	Lsamp	5430428I19|AW046674|B130007O04Rik|D930023J12Rik|Gm29907|Lam|Lamp	limbic system-associated membrane protein	protein-coding	0.015000	0.388060	7(AATGTATTATTCACA,+,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2054	chr4	13910549	13910749	+	2.12831	NA	Intergenic	Intergenic	125867	NM_009822	12395	Mm.4909	NM_009822	ENSMUSG00000006586	Runx1t1	Cbfa2t1h|ETO|MTG8	RUNX1 translocation partner 1	protein-coding	0.005000	0.393035			11(ATTAGCATGACAGAAG,-,0.00),32(CTTTACAAGGCAAAAT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2108	chr4	85647101	85647301	+	2.12831	NA	Intergenic	Intergenic	-406714	NM_029967	77739	Mm.331690	NM_029967	ENSMUSG00000066113	Adamtsl1	5930437A14Rik|6720426B09Rik|ADAMTSL-1	ADAMTS-like 1	protein-coding	0.005000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-408	chr10	128409833	128410033	+	2.12831	NA	promoter-TSS (NM_027257)	promoter-TSS (NM_027257)	-83	NM_027257	69917	Mm.46614	NM_027257	ENSMUSG00000025374	Nabp2	2610036N15Rik|Obfc2b|SSB1	nucleic acid binding protein 2	protein-coding	0.045000	0.562189			
merged_common-180	chr4	98925840	98926040	+	2.12831	NA	intron (NM_001356424, intron 1 of 7)	(CATATA)n|Simple_repeat|Simple_repeat	2130	NM_146144	230484	Mm.371692	NM_146144	ENSMUSG00000028560	Usp1	-	ubiquitin specific peptidase 1	protein-coding	0.005000	0.338308		-7(CATACATATGCATA,+,0.00),-7(CATACATATGCATA,-,0.00),-1(TATGCATATGTATA,+,0.00),-1(TATGCATATGTATA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-478	chr11	47642079	47642279	+	2.12831	NA	Intergenic	MER81|DNA|hAT-Blackjack	-262854	NM_011891	24052	Mm.34175	NM_011891	ENSMUSG00000020354	Sgcd	35DAG|A530047J11Rik|AI504364|AW547581|SG-delta|delta-SG	sarcoglycan, delta (dystrophin-associated glycoprotein)	protein-coding	0.010000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-1756	chr2	117455641	117455841	+	2.12831	NA	Intergenic	Intergenic	-112864	NM_011246	19419	Mm.42150	NM_011246	ENSMUSG00000027347	Rasgrp1	Rasgrp|calDAG-GEFII	RAS guanyl releasing protein 1	protein-coding	0.000000	0.328358			30(ATTAACATAAATAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-508	chr11	65800970	65801170	+	2.12831	NA	Intergenic	L1ME4b|LINE|L1	-6105	NM_001302375	52712	Mm.340052	NM_026107	ENSMUSG00000018347	Zkscan6	1700128E15Rik|D11Ertd714e|KOX11|Zfp535|Znf18	zinc finger with KRAB and SCAN domains 6	protein-coding	0.020000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-199	chr1	174994197	174994397	+	2.12831	NA	Intergenic	Intergenic	-72478	NM_011825	23893	Mm.25760	NM_011825	ENSMUSG00000050069	Grem2	Gremlin2|Prdc	gremlin 2, DAN family BMP antagonist	protein-coding	0.005000	0.328358			-17(TCATGTTTATGCAAAT,+,0.00)
merged_common-67	chr12	103164409	103164609	+	2.12831	NA	intron (NM_001081017, intron 42 of 48)	intron (NM_001081017, intron 42 of 48)	77637	NM_133364	170952	Mm.217019	NM_133364	ENSMUSG00000041669	Prima1	B230212M13Rik|BB120497|PRiMA	proline rich membrane anchor 1	protein-coding	0.010000	0.398010			-46(ATTTGCATGATACATG,-,0.00),79(ATTTAAATGAGAAGGA,-,0.00)
merged_common-91	chr14	84443433	84443633	+	2.12831	NA	promoter-TSS (NM_001013753)	promoter-TSS (NM_001013753)	-30	NM_001013753	219228	Mm.153643	NM_001013753	ENSMUSG00000035566	Pcdh17	C030033F14Rik|Gm78	protocadherin 17	protein-coding	0.095000	0.661692			
ePOU_nocontrol_ChIP_peaks_unique-1252	chr16	50201352	50201552	+	2.12831	NA	intron (NM_027444, intron 15 of 16)	intron (NM_027444, intron 15 of 16)	-128600	NR_045935	224180	Mm.146439	NM_175010		Gm4827	B130050K08|EG224180	predicted gene 4827	ncRNA	0.005000	0.422886			-12(ATATACATTAGAAAGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-231	chr1	191575915	191576115	+	2.12831	NA	promoter-TSS (NM_001305233)	promoter-TSS (NM_001305233)	379	NM_001306203	77065	Mm.338175	NM_178632	ENSMUSG00000037461	Ints7	5930412E23Rik|int7	integrator complex subunit 7	protein-coding	0.080000	0.626866			
ePOU_nocontrol_ChIP_peaks_unique-502	chr11	63355798	63355998	+	2.12831	NA	Intergenic	Intergenic	223095	NM_001302260	18858	Mm.1237	NM_008885	ENSMUSG00000018217	Pmp22	22kDa|Gas-3|HNPP|TRE002|Tr|trembler	peripheral myelin protein 22	protein-coding	0.005000	0.323383			
ePOU_nocontrol_ChIP_peaks_unique-2624	chr7	92413532	92413732	+	2.12831	NA	intron (NM_001243047, intron 4 of 10)	intron (NM_001243047, intron 4 of 10)	-147517	NM_001162918	66365	Mm.21173	NM_025515	ENSMUSG00000030613	Ccdc90b	2310015N07Rik|C86558	coiled-coil domain containing 90B	protein-coding	0.000000	0.422886	-30(TATGAATAATGCATT,+,0.00),-30(TATGAATAATGCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1149	chr15	88687566	88687766	+	2.12831	NA	3' UTR (NM_001033274, exon 13 of 13)	3' UTR (NM_001033274, exon 13 of 13)	46553	NM_001033274	223770	Mm.254438	NM_001033274	ENSMUSG00000022387	Brd1	1110059H06Rik|AI316859|mKIAA4191	bromodomain containing 1	protein-coding	0.020000	0.432836		-55(TATAAAAATGCATA,+,0.00)	-15(TCATTATAAAGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1530	chr19	8941696	8941896	+	2.12831	NA	promoter-TSS (NM_011842)	promoter-TSS (NM_011842)	-124	NM_011842	23942	Mm.25339	NM_011842	ENSMUSG00000071646	Mta2	AW550797|Mata1l1|Mta1l1|mmta2	metastasis-associated gene family, member 2	protein-coding	0.110000	0.631841			
ePOU_nocontrol_ChIP_peaks_unique-2109	chr4	86088778	86088978	+	2.12831	NA	intron (NM_029967, intron 2 of 27)	intron (NM_029967, intron 2 of 27)	34903	NM_001368621	77739	Mm.331690	NM_029967	ENSMUSG00000066113	Adamtsl1	5930437A14Rik|6720426B09Rik|ADAMTSL-1	ADAMTS-like 1	protein-coding	0.000000	0.328358	55(AATGCATTATTCATA,+,0.00),55(AATGCATTATTCATA,-,0.00)		-35(AGTTTGTCTTTCTAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1804	chr2	146323269	146323469	+	2.12831	NA	intron (NM_001033348, intron 37 of 40)	intron (NM_001033348, intron 37 of 40)	64083	NR_040619	77806	Mm.392819	NR_040619	ENSMUSG00000085958	A930019D19Rik	-	RIKEN cDNA A930019D19 gene	ncRNA	0.000000	0.353234			
Oct4_nocontrol_ChIP_peaks_unique-71	chr4	137778025	137778225	+	2.10367	NA	intron (NM_007431, intron 1 of 11)	L1ME2|LINE|L1	-11650	NM_001287172	11647	Mm.288186	NM_007431	ENSMUSG00000028766	Alpl	ALP|APTNAP|Akp-2|Akp2|TNAP|TNSALP	alkaline phosphatase, liver/bone/kidney	protein-coding	0.010000	0.447761			-65(ATCTGCATGAGAATCC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-304	chr10	40372514	40372714	+	2.10367	NA	intron (NM_001291816, intron 1 of 11)	intron (NM_001291816, intron 1 of 11)	23306	NM_001291817	78334	Mm.200924	NM_198164	ENSMUSG00000038481	Cdk19	2700084L06Rik|AI845279|AW228747|CDK11|Cdc2l6|mKIAA1028	cyclin-dependent kinase 19	protein-coding	0.015000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-2785	chr8	94098417	94098617	+	2.10367	NA	promoter-TSS (NM_026116)	promoter-TSS (NM_026116)	-8	NM_026116	67378	Mm.292107	NM_026116	ENSMUSG00000031755	Bbs2	2410125H22Rik|AI447581	Bardet-Biedl syndrome 2 (human)	protein-coding	0.110000	0.651741			
ePOU_nocontrol_ChIP_peaks_unique-957	chr14	45190941	45191141	+	2.10367	NA	intron (NM_172597, intron 6 of 20)	L1MC1|LINE|L1	28384	NM_172597	70561	Mm.28129	NM_172597	ENSMUSG00000021830	Txndc16	5730420B22Rik|C77647	thioredoxin domain containing 16	protein-coding	0.005000	0.407960			
Oct4_nocontrol_ChIP_peaks_unique-36	chr15	32502031	32502231	+	2.10367	NA	intron (NM_009154, intron 5 of 22)	intron (NM_009154, intron 5 of 22)	257318	NM_009154	20356	Mm.260374	NM_009154	ENSMUSG00000022231	Sema5a	5930434A13|9130201M22Rik|AI464145|Semaf|semF	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	protein-coding	0.010000	0.368159			34(ATTAGCATATCAAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-415	chr11	6415782	6415982	+	2.10367	NA	promoter-TSS (NM_008907)	promoter-TSS (NM_008907)	15	NM_008907	268373	Mm.5246	NM_008907	ENSMUSG00000071866	Ppia	2700098C05|Cphn|CyP-18|CypA|SP18	peptidylprolyl isomerase A	protein-coding	0.125000	0.656716			
ePOU_nocontrol_ChIP_peaks_unique-366	chr10	91345681	91345881	+	2.10367	NA	Intergenic	MIRc|SINE|MIR	-125162	NR_151510	102633753	Mm.416936	NR_151510		4930534H03Rik	-	RIKEN cDNA 4930534H03 gene	ncRNA	0.025000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-2419	chr6	41792586	41792786	+	2.10367	NA	Intergenic	RLTR13D3|LTR|ERVK	-20389	NM_146576	258569	Mm.377571	NM_146576	ENSMUSG00000045479	Olfr459	MOR120-1	olfactory receptor 459	protein-coding	0.000000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-880	chr13	94394917	94395117	+	2.10367	NA	intron (NM_009680, intron 3 of 26)	intron (NM_009680, intron 3 of 26)	36057	NM_009680	11774	Mm.21185	NM_009680	ENSMUSG00000021686	Ap3b1	AP-3|AU015684|C78395|Hps2|beta3A|pe|pearl|rim2	adaptor-related protein complex 3, beta 1 subunit	protein-coding	0.015000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-2616	chr7	89170263	89170463	+	2.10367	NA	intron (NM_001360745, intron 5 of 13)	intron (NM_001360745, intron 5 of 13)	168424	NM_028343	72759	Mm.208477	NM_028343	ENSMUSG00000039428	Tmem135	2810439K08Rik|AW319712|PMP52	transmembrane protein 135	protein-coding	0.000000	0.258706		33(AGTGCATATGCAAA,-,0.00)	-49(TGCTTATCATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1090	chr15	38627489	38627689	+	2.10367	NA	Intergenic	Intergenic	-32655	NR_045757	69679	Mm.416890	NR_045757	ENSMUSG00000102106	2310043O21Rik	-	RIKEN cDNA 2310043O21 gene	ncRNA	0.005000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-1649	chr2	29346684	29346884	+	2.10367	NA	promoter-TSS (NM_026896)	promoter-TSS (NM_026896)	-26	NM_026896	68975	Mm.330109	NM_026896	ENSMUSG00000026799	Med27	1500015J03Rik|2310042P07Rik|AA682045|Crsp8|D2Ertd434e	mediator complex subunit 27	protein-coding	0.075000	0.592040			
ePOU_nocontrol_ChIP_peaks_unique-920	chr14	10166626	10166826	+	2.10367	NA	intron (NM_001308286, intron 2 of 6)	intron (NM_001308286, intron 2 of 6)	282631	NR_030680	100042415	Mm.235938	NR_030680	ENSMUSG00000089686	Mnd1-ps	Gm3833	Mnd1 retrotransposed pseudogene	pseudo	0.000000	0.303483			77(TTAAACATGACAAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2771	chr8	84847031	84847231	+	2.10367	NA	promoter-TSS (NM_007591)	promoter-TSS (NM_007591)	-200	NM_007591	12317	Mm.1971	NM_007591	ENSMUSG00000003814	Calr	CRT|Calregulin	calreticulin	protein-coding	0.075000	0.631841			
ePOU_nocontrol_ChIP_peaks_unique-2823	chr8	127979106	127979306	+	2.10367	NA	Intergenic	Intergenic	299019	NR_105822	102465212		NR_105822	ENSMUSG00000099326	Mir21c	Gm28013|mmu-mir-21c	microRNA 21c	ncRNA	0.010000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-474	chr11	45926769	45926969	+	2.10367	NA	Intergenic	Intergenic	18066	NM_028185	72290	Mm.249827	NM_028185	ENSMUSG00000044847	Lsm11	2210404M20Rik|AV079530	U7 snRNP-specific Sm-like protein LSM11	protein-coding	0.020000	0.477612			
ePOU_nocontrol_ChIP_peaks_unique-2841	chr9	21291250	21291450	+	2.10367	NA	promoter-TSS (NM_009878)	promoter-TSS (NM_009878)	-141	NM_009878	12581	Mm.29020	NM_009878	ENSMUSG00000096472	Cdkn2d	INK4d|p19|p19INK4d	cyclin dependent kinase inhibitor 2D	protein-coding	0.065000	0.631841			
ePOU_nocontrol_ChIP_peaks_unique-981	chr14	61161699	61161899	+	2.10367	NA	intron (NM_172809, intron 2 of 9)	intron (NM_172809, intron 2 of 9)	23342	NM_015788	50720	Mm.440703	NM_015788	ENSMUSG00000048279	Sacs	A230052M14|DNAJC29|E130115J16Rik	sacsin	protein-coding	0.015000	0.442786			-32(CCTTTCTAATGCAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1809	chr2	153632519	153632719	+	2.10367	NA	exon (NM_133850, exon 1 of 9)	exon (NM_133850, exon 1 of 9)	162	NM_001195390	99311	Mm.294478	NM_133850	ENSMUSG00000056941	Commd7	2310010I22Rik|AW060956|mU3	COMM domain containing 7	protein-coding	0.100000	0.711443			
ePOU_nocontrol_ChIP_peaks_unique-2945	chr9	108826996	108827196	+	2.10367	NA	exon (NM_001359573, exon 1 of 36)	exon (NM_001359573, exon 1 of 36)	1051	NM_001359573	107934	Mm.39945	NM_080437	ENSMUSG00000023473	Celsr3	Adgrc3|Fmi1|flamingo|mKIAA0812	cadherin, EGF LAG seven-pass G-type receptor 3	protein-coding	0.105000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-277	chr10	24951209	24951409	+	2.10367	NA	Intergenic	Intergenic	-23839	NM_007482	11846	Mm.154144	NM_007482	ENSMUSG00000019987	Arg1	AI|AI256583|Arg-1|PGIF	arginase, liver	protein-coding	0.010000	0.388060	-22(CATGAATAATGCATA,+,0.00),-22(CATGAATAATGCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2873	chr9	50528467	50528667	+	2.10367	NA	promoter-TSS (NM_001364488)	promoter-TSS (NM_001364488)	89	NM_011220	19286	Mm.35856	NM_011220	ENSMUSG00000032067	Pts	PTPS	6-pyruvoyl-tetrahydropterin synthase	protein-coding	0.145000	0.696517			
ePOU_nocontrol_ChIP_peaks_unique-1781	chr2	131232634	131232834	+	2.10367	NA	Intergenic	ORR1B2|LTR|ERVL-MaLR	-1329	NM_001206383	228607	Mm.287226	NM_144888	ENSMUSG00000037523	Mavs	D430028G21Rik|IPS-1|Visa|cardif	mitochondrial antiviral signaling protein	protein-coding	0.005000	0.502488			-96(GTTTGAATGAAAAAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-325	chr10	59705771	59705971	+	2.10367	NA	intron (NM_001359267, intron 1 of 11)	intron (NM_001359267, intron 1 of 11)	3308	NM_001359267	216001	Mm.27199	NM_144822	ENSMUSG00000020111	Micu1	C730016L05Rik|Calc|Cbara1	mitochondrial calcium uptake 1	protein-coding	0.000000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-1301	chr17	3218639	3218839	+	2.10367	NA	Intergenic	Intergenic	103767	NM_134123	106583	Mm.124373	NM_134123	ENSMUSG00000046201	Scaf8	A630086M08Rik|A930036P18Rik|AA408306|AI447644|AI448652|AU015035|Rbm16|mKIAA1116	SR-related CTD-associated factor 8	protein-coding	0.010000	0.328358			-46(ATTTACAATGCAAAAC,-,0.00),27(TTGTTGCTATGGAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2511	chr6	119561644	119561844	+	2.10367	NA	Intergenic	L1MB3|LINE|L1	-17397	NM_009525	22419	Mm.321818	NM_009525	ENSMUSG00000030170	Wnt5b	AW545702|Wnt-5b	wingless-type MMTV integration site family, member 5B	protein-coding	0.005000	0.378109	35(CATACATAATTCATC,+,0.00),35(CATACATAATTCATC,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2462	chr6	73248361	73248561	+	2.10367	NA	promoter-TSS (NM_019879)	promoter-TSS (NM_019879)	-44	NM_019879	56451	Mm.29845	NM_019879	ENSMUSG00000052738	Suclg1	1500000I01Rik|Sucla1	succinate-CoA ligase, GDP-forming, alpha subunit	protein-coding	0.045000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-1763	chr2	124101439	124101639	+	2.10367	NA	intron (NM_001290997, intron 1 of 20)	intron (NM_001290997, intron 1 of 20)	11570	NM_001290997	214968	Mm.330536	NM_172537	ENSMUSG00000027200	Sema6d	1110067B02Rik|AA409156|D330011G23|mKIAA1479	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	protein-coding	0.000000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-1425	chr18	13388780	13388980	+	2.10367	NA	Intergenic	Intergenic	381890	NM_153087	225192	Mm.207073	NM_153087	ENSMUSG00000037346	Hrh4	AXOR35|BG26|GPCR105|GPRv53|H4|H4R|HH4R	histamine receptor H4	protein-coding	0.020000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-256	chr10	13108284	13108484	+	2.10367	NA	intron (NM_001364644, intron 3 of 7)	intron (NM_001364644, intron 3 of 7)	17539	NR_131912	338438		NR_131912		Hymai	-	hydatidiform mole associated and imprinted transcript	ncRNA	0.010000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-233	chr1	192136962	192137162	+	2.10367	NA	intron (NR_033536, intron 1 of 3)	CpG	164	NR_033536	100038712	Mm.474908	NR_033536	ENSMUSG00000097316	Gm10516	-	predicted gene 10516	ncRNA	0.080000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-1278	chr16	78456370	78456570	+	2.10367	NA	Intergenic	Intergenic	-79289	NM_001297747	12228	Mm.392910	NM_009770	ENSMUSG00000022863	Btg3	ANA|tob5	B cell translocation gene 3	protein-coding	0.015000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-1717	chr2	79923359	79923559	+	2.10367	NA	intron (NM_001159582, intron 3 of 15)	intron (NM_001159582, intron 3 of 15)	-15060	NM_001009978	18573	Mm.40678	NM_016744	ENSMUSG00000059173	Pde1a	AI987702|AW125737	phosphodiesterase 1A, calmodulin-dependent	protein-coding	0.000000	0.378109			56(CTTTGAAAAATAATAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1348	chr17	33143108	33143308	+	2.10367	NA	intron (NM_001360203, intron 2 of 2)	intron (NM_001360203, intron 2 of 2)	-3525	NM_177719	240069	Mm.157765	NM_177719	ENSMUSG00000048602	Morc2b	4932411A10Rik|Tce6	microrchidia 2B	protein-coding	0.010000	0.343284			-10(ATTTGAATAGCAAATT,-,0.00),1(AAATTCTCATTCATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2038	chr3	155093128	155093328	+	2.10367	NA	promoter-TSS (NM_028938)	promoter-TSS (NM_028938)	150	NM_029330	75540	Mm.35218	NM_029330	ENSMUSG00000053870	Fpgt	1700016E03Rik	fucose-1-phosphate guanylyltransferase	protein-coding	0.050000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-2577	chr7	43562741	43562941	+	2.10367	NA	intron (NM_001008549, intron 1 of 4)	intron (NM_001008549, intron 1 of 4)	471	NM_001008549	210104	Mm.333821	NM_001008549	ENSMUSG00000056592	Zfp658	-	zinc finger protein 658	protein-coding	0.030000	0.482587			
Oct4_nocontrol_ChIP_peaks_unique-66	chr4	29170648	29170848	+	2.10367	NA	Intergenic	Intergenic	102669	NR_151693	102634169		NR_151693		Gm11917	-	predicted gene 11917	ncRNA	0.010000	0.323383			13(ATTTGCATTTCAAAAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1818	chr2	160805509	160805709	+	2.10367	NA	intron (NM_177263, intron 2 of 3)	intron (NM_177263, intron 2 of 3)	67381	NM_177263	320799	Mm.436734	NM_177263	ENSMUSG00000035877	Zhx3	1810059C13Rik|4932418O04Rik|9530010N21Rik|Tix1|mKIAA0395	zinc fingers and homeoboxes 3	protein-coding	0.000000	0.278607			37(GTTTGCAAGAAAAGAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1867	chr3	34104152	34104352	+	2.10367	NA	Intergenic	Intergenic	-22898	NM_001286972	67713	Mm.274266	NM_026332	ENSMUSG00000027679	Dnajc19	1810055D05Rik|AA959924|Tim14	DnaJ heat shock protein family (Hsp40) member C19	protein-coding	0.000000	0.318408			
ePOU_nocontrol_ChIP_peaks_unique-2111	chr4	86208474	86208674	+	2.10367	NA	intron (NM_029967, intron 5 of 27)	Lx10|LINE|L1	154599	NM_001368621	77739	Mm.331690	NM_029967	ENSMUSG00000066113	Adamtsl1	5930437A14Rik|6720426B09Rik|ADAMTSL-1	ADAMTS-like 1	protein-coding	0.000000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-648	chr12	21417467	21417667	+	2.10367	NA	promoter-TSS (NM_011739)	promoter-TSS (NM_011739)	-131	NM_011739	22630	Mm.289630	NM_011739	ENSMUSG00000076432	Ywhaq	2700028P07Rik|AA409740|AU021156|R74690	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta	protein-coding	0.080000	0.626866			
ePOU_nocontrol_ChIP_peaks_unique-236	chr1	194320506	194320706	+	2.10367	NA	Intergenic	L1M5|LINE|L1	-97847	NR_040477	74942	Mm.60689	NR_040477	ENSMUSG00000103692	4930503O07Rik	-	RIKEN cDNA 4930503O07 gene	ncRNA	0.005000	0.318408			-41(TCATTGTGATTTTAAT,+,0.00),5(ATATTTTCATGTTTAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2729	chr8	53058015	53058215	+	2.10367	NA	Intergenic	Intergenic	-453587	NM_001005847	11593	Mm.334535	NM_001005847	ENSMUSG00000031521	Aga	AW060726	aspartylglucosaminidase	protein-coding	0.005000	0.268657			14(ATTTAAATAAAACAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2508	chr6	117502373	117502573	+	2.10367	NA	Intergenic	L1MA6|LINE|L1	7238	NR_152214	100126203	Mm.217172	NR_152214		6820426E19Rik	Gm43983	RIKEN cDNA 6820426E19 gene	ncRNA	0.010000	0.393035			-52(AATTGAATAACAAGAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1076	chr15	27549140	27549340	+	2.10367	NA	intron (NM_020332, intron 2 of 11)	intron (NM_020332, intron 2 of 11)	-22254	NR_106065	102466808		NR_106065	ENSMUSG00000098416	Mir7117	Gm27729|mmu-mir-7117	microRNA 7117	ncRNA	0.015000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-2784	chr8	93382308	93382508	+	2.10367	NA	Intergenic	Intergenic	-2631	NM_001370830	75704	Mm.480920	NM_001370830	ENSMUSG00000074156	Ces1h	2310039D24Rik	carboxylesterase 1H	protein-coding	0.000000	0.338308		-53(TATGCATAGGAATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-44	chr1	42261892	42262092	+	2.10367	NA	Intergenic	Intergenic	432833	NR_027826	66297	Mm.45203	NM_183252	ENSMUSG00000060424	Pantr1	2610017I09Rik|Pou3f3os|linc-Brn1a	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1	ncRNA	0.040000	0.537313			
ePOU_nocontrol_ChIP_peaks_unique-1894	chr3	54735142	54735342	+	2.10367	NA	promoter-TSS (NM_025442)	promoter-TSS (NM_025442)	122	NM_001163570	69639	Mm.29253	NM_027148	ENSMUSG00000027752	Exosc8	2310032N20Rik|CIP3|mKIAA4013	exosome component 8	protein-coding	0.120000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-1478	chr18	61776870	61777070	+	2.10367	NA	intron (NM_178928, intron 1 of 18)	intron (NM_178928, intron 1 of 18)	9692	NM_178928	106877	Mm.26632	NM_178928	ENSMUSG00000033032	Afap1l1	AI173486	actin filament associated protein 1-like 1	protein-coding	0.000000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-320	chr10	57763149	57763349	+	2.10367	NA	Intergenic	Intergenic	-21674	NM_021272	12140	Mm.3644	NM_021272	ENSMUSG00000019874	Fabp7	B-FABP|BFABP|Blbp|MRG	fatty acid binding protein 7, brain	protein-coding	0.005000	0.417910			-47(CGTTTGTTATGTAAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2994	chrX	104592194	104592394	+	2.10367	NA	intron (NM_175358, intron 3 of 11)	L1MB5|LINE|L1	78770	NM_175358	108672	Mm.30574	NM_175358	ENSMUSG00000033906	Zdhhc15	6030457O13Rik	zinc finger, DHHC domain containing 15	protein-coding	0.000000	0.328358		-78(TATGCATATACAAT,-,0.00),26(TGTGCATATGTATT,+,0.00),26(TGTGCATATGTATT,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-293	chr10	38875844	38876044	+	2.10367	NA	Intergenic	Intergenic	-54165	NM_001177783	215919	Mm.294313	NM_001177783	ENSMUSG00000094311	Rfpl4b	100040915|Gm3037|Gm62	ret finger protein-like 4B	protein-coding	0.010000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-783	chr13	8885664	8885864	+	2.10367	NA	5' UTR (NM_145360, exon 1 of 5)	5' UTR (NM_145360, exon 1 of 5)	158	NM_145360	319554	Mm.29847	NM_145360	ENSMUSG00000058258	Idi1	4832416K17Rik|IPPI1	isopentenyl-diphosphate delta isomerase	protein-coding	0.080000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-1476	chr18	60767057	60767257	+	2.10367	NA	Intergenic	Intergenic	-7439	NM_020600	20044	Mm.43778	NM_020600	ENSMUSG00000024608	Rps14	2600014J02Rik|AL023078	ribosomal protein S14	protein-coding	0.015000	0.467662			-13(CTTTGAAAGAGCAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1468	chr18	55134120	55134320	+	2.10367	NA	Intergenic	Intergenic	-141629	NM_001360787	269023	Mm.192984	NM_175751	ENSMUSG00000052713	Zfp608	4932417D18Rik|D430007A19Rik|Znf608	zinc finger protein 608	protein-coding	0.015000	0.437811			
merged_common-41	chr11	61682328	61682528	+	2.10367	NA	intron (NM_001033227, intron 10 of 15)	intron (NM_001033227, intron 10 of 15)	-1982	NM_178618	69640	Mm.458559	NM_178618	ENSMUSG00000042377	Fam83g	2310040C09Rik|AI506990|wly	family with sequence similarity 83, member G	protein-coding	0.005000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-746	chr12	94691285	94691485	+	2.10367	NA	Intergenic	Intergenic	764047	NR_106201	102466888		NR_106201	ENSMUSG00000098931	Mir8099-2	Gm27692|mmu-mir-8099-2	microRNA 8099-2	ncRNA	0.000000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-1325	chr17	24455238	24455438	+	2.10367	NA	promoter-TSS (NM_001301784)	promoter-TSS (NM_001301784)	54	NM_001301784	13560	Mm.163132	NM_007893	ENSMUSG00000024137	E4f1	p120E4F|phi-AP3	E4F transcription factor 1	protein-coding	0.110000	0.621891			
ePOU_nocontrol_ChIP_peaks_unique-2786	chr8	94838199	94838399	+	2.10367	NA	promoter-TSS (NM_134141)	promoter-TSS (NM_134141)	41	NM_134141	109006	Mm.27582	NM_134141	ENSMUSG00000031781	Ciapin1	2810413N20Rik|AA617265|AU021794|anamorsin	cytokine induced apoptosis inhibitor 1	protein-coding	0.145000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-1083	chr15	35826738	35826938	+	2.10367	NA	intron (NM_177151, intron 39 of 61)	intron (NM_177151, intron 39 of 61)	111408	NM_053071	12864	Mm.548	NM_053071	ENSMUSG00000014313	Cox6c	-	cytochrome c oxidase subunit 6C	protein-coding	0.000000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-1439	chr18	26690849	26691049	+	2.10367	NA	Intergenic	Intergenic	-936792	NR_155522	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding	0.000000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-324	chr10	59577950	59578150	+	2.10367	NA	intron (NM_001033259, intron 1 of 7)	intron (NM_001033259, intron 1 of 7)	38642	NM_001033259	215999	Mm.296470	NM_001033259	ENSMUSG00000009647	Mcu	2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64	mitochondrial calcium uniporter	protein-coding	0.015000	0.482587		-42(ACTCAATATGCATT,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2257	chr5	65199405	65199605	+	2.10367	NA	promoter-TSS (NM_001359879)	promoter-TSS (NM_001359879)	-191	NM_153391	213081	Mm.127550	NM_153391	ENSMUSG00000037890	Wdr19	C330027H04Rik|D330023L08Rik|DYF2|Ift144|PWDMP|mKIAA1638	WD repeat domain 19	protein-coding	0.030000	0.562189			
ePOU_nocontrol_ChIP_peaks_unique-2608	chr7	79392138	79392338	+	2.10367	NA	promoter-TSS (NM_145946)	promoter-TSS (NM_145946)	-100	NM_145946	208836	Mm.349493	NM_145946	ENSMUSG00000039187	Fanci	-	Fanconi anemia, complementation group I	protein-coding	0.065000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-1663	chr2	34341902	34342102	+	2.10367	NA	intron (NM_001290576, intron 2 of 7)	L1MB5|LINE|L1	30043	NM_001290576	18516	Mm.239941	NM_016768	ENSMUSG00000038718	Pbx3	-	pre B cell leukemia homeobox 3	protein-coding	0.000000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-605	chr11	109703878	109704078	+	2.10367	NA	intron (NM_153782, intron 1 of 10)	intron (NM_153782, intron 1 of 10)	18260	NM_153782	208659	Mm.208662	NM_153782	ENSMUSG00000020614	Fam20a	AI606893	family with sequence similarity 20, member A	protein-coding	0.020000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-650	chr12	24566053	24566253	+	2.10367	NA	Intergenic	Intergenic	-6134	NM_001161406	195733	Mm.263068	NM_145890	ENSMUSG00000020656	Grhl1	LBP-32|MGR|Tcfcp2l2	grainyhead like transcription factor 1	protein-coding	0.005000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-2744	chr8	68621449	68621649	+	2.10367	NA	intron (NM_172753, intron 2 of 9)	intron (NM_172753, intron 2 of 9)	113536	NM_001364256	234356	Mm.334569	NM_172753	ENSMUSG00000036356	Csgalnact1	4732435N03Rik|CSGalNAcT-1	chondroitin sulfate N-acetylgalactosaminyltransferase 1	protein-coding	0.005000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-2011	chr3	142209655	142209855	+	2.10367	NA	Intergenic	Intergenic	-40330	NM_001277217	12167	Mm.39089	NM_007560	ENSMUSG00000052430	Bmpr1b	AI385617|ALK-6|AV355320|Acvrlk6|Alk6|BMPR-1B|BMPR-IB|CFK-43a|SKR6	bone morphogenetic protein receptor, type 1B	protein-coding	0.005000	0.368159	-5(TATGAATTATTCATT,+,0.00),-5(TATGAATTATTCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-420	chr11	8472688	8472888	+	2.10367	NA	intron (NM_001083587, intron 20 of 30)	intron (NM_001083587, intron 20 of 30)	191747	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding	0.030000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-1392	chr17	80772774	80772974	+	2.10367	NA	Intergenic	Intergenic	-44849	NM_001360278	225028	Mm.311948	NM_001081357	ENSMUSG00000024242	Map4k3	4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1	mitogen-activated protein kinase kinase kinase kinase 3	protein-coding	0.020000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-866	chr13	84367243	84367443	+	2.10367	NA	Intergenic	Intergenic	145047	NM_175187	72745	Mm.295063	NM_175187	ENSMUSG00000035762	Tmem161b	2810446P07Rik|AI843389	transmembrane protein 161B	protein-coding	0.005000	0.323383			25(GTTTGCAAGTCAAAAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1991	chr3	116592842	116593042	+	2.10367	NA	intron (NM_030016, intron 2 of 11)	intron (NM_030016, intron 2 of 11)	1945	NR_152258	229780	Mm.259648	NM_030016	ENSMUSG00000033439	Trmt13	4631408H19Rik|A330067P21|A930028L21Rik|Ccdc76	tRNA methyltransferase 13	protein-coding	0.010000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-2459	chr6	71908888	71909088	+	2.10367	NA	promoter-TSS (NM_027275)	promoter-TSS (NM_027275)	-65	NM_009088	20019	Mm.135581	NM_009088	ENSMUSG00000049553	Polr1a	194kDa|2900087K15Rik|3010014K16Rik|RPA194|Rpo1-4|mRPA1	polymerase (RNA) I polypeptide A	protein-coding	0.045000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-2295	chr5	98659284	98659484	+	2.10367	NA	intron (NM_001024614, intron 3 of 5)	PB1D7|SINE|Alu	-183720	NR_030484	735265		NR_030484	ENSMUSG00000105814	Mir703	Mirn703|mir-703|mmu-mir-703	microRNA 703	ncRNA	0.005000	0.437811	-53(AATGCATTATGCAAA,+,0.00),-53(AATGCATTATGCAAA,-,0.00)	-59(TATGCAAATGCATT,+,0.00),-59(TATGCAAATGCATT,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1466	chr18	54580637	54580837	+	2.10367	NA	Intergenic	Intergenic	-31007	NR_045400	328957	Mm.402781	NR_045400	ENSMUSG00000118154	9330117O12Rik	9330117O12	RIKEN cDNA 9330117O12 gene	ncRNA	0.005000	0.368159			
merged_common-239	chr9	95511912	95512112	+	2.10367	NA	promoter-TSS (NM_001114977)	promoter-TSS (NM_001114977)	-16	NM_026476	67958	Mm.292742	NM_026476	ENSMUSG00000032407	U2surp	2610101N10Rik|AU023006|Sr140	U2 snRNP-associated SURP domain containing	protein-coding	0.155000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-2112	chr4	86421519	86421719	+	2.10367	NA	intron (NM_029967, intron 25 of 27)	Lx8|LINE|L1	136684	NM_001081096	75811	Mm.56451	NM_001081096	ENSMUSG00000028492	Saxo1	4930500O09Rik|Fam154a	stabilizer of axonemal microtubules 1	protein-coding	0.000000	0.363184			-22(AATTTATTATGCACAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2888	chr9	60361403	60361603	+	2.10367	NA	intron (NM_001040426, intron 6 of 17)	intron (NM_001040426, intron 6 of 17)	149532	NM_001040426	207596	Mm.28791	NM_172444	ENSMUSG00000032289	Thsd4	ADAMTSL-6|ADAMTSL6|AI585901|Adamtsl4|B230114P05Rik	thrombospondin, type I, domain containing 4	protein-coding	0.000000	0.318408			59(TATCTGTTTTGGAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1876	chr3	41172911	41173111	+	2.10367	NA	Intergenic	Intergenic	-89965	NM_027558	70804	Mm.40321	NM_027558	ENSMUSG00000049940	Pgrmc2	4631434O19Rik|5730409G06Rik|DG6|PMBP	progesterone receptor membrane component 2	protein-coding	0.000000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-682	chr12	47098291	47098491	+	2.10367	NA	Intergenic	Intergenic	-279624	NM_001364638	664883	Mm.247195	NM_021361	ENSMUSG00000021047	Nova1	9430099M15Rik|G630039L02|Nova-1	neuro-oncological ventral antigen 1	protein-coding	0.000000	0.213930	-17(TATGAATAATGCATT,+,0.00),-17(TATGAATAATGCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1160	chr15	97138459	97138659	+	2.10367	NA	Intergenic	ORR1C2|LTR|ERVL-MaLR	28685	NR_155279	102635594	Mm.392594	NR_155278	ENSMUSG00000116295	Gm32885	-	predicted gene, 32885	ncRNA	0.005000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-2580	chr7	44929741	44929941	+	2.10367	NA	promoter-TSS (NM_007458)	promoter-TSS (NM_007458)	-351	NM_001077264	11771	Mm.6877	NM_007458	ENSMUSG00000060279	Ap2a1	Adtaa	adaptor-related protein complex 2, alpha 1 subunit	protein-coding	0.090000	0.597015			
ePOU_nocontrol_ChIP_peaks_unique-2615	chr7	88754143	88754343	+	2.10367	NA	Intergenic	Intergenic	323970	NM_028238	72433	Mm.276669	NM_028238	ENSMUSG00000030559	Rab38	2310011F14Rik|AU043391|cht	RAB38, member RAS oncogene family	protein-coding	0.005000	0.363184			-2(CTATTATGTTGGTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1901	chr3	58311294	58311494	+	2.10367	NA	Intergenic	Intergenic	-103326	NM_001347233	72033	Mm.218409	NM_001081229	ENSMUSG00000027806	Tsc22d2	1810043J12Rik|5530402M19Rik	TSC22 domain family, member 2	protein-coding	0.005000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-1610	chr19	60300842	60301042	+	2.10367	NA	Intergenic	Intergenic	-74241	NM_029648	76539	Mm.290183	NM_029648	ENSMUSG00000057858	Fam204a	2310065H12Rik|2610015K05Rik|D19Ertd737e	family with sequence similarity 204, member A	protein-coding	0.000000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-2232	chr5	34660068	34660268	+	2.10367	NA	promoter-TSS (NM_019497)	promoter-TSS (NM_019497)	-20	NM_029278	75416	Mm.40292	NM_029278	ENSMUSG00000036693	Nop14	2610033H07Rik|Nol14	NOP14 nucleolar protein	protein-coding	0.060000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-2198	chr5	13982479	13982679	+	2.10367	NA	Intergenic	Intergenic	-42697	NM_011348	20349	Mm.134093	NM_011348	ENSMUSG00000063531	Sema3e	6430702L12|AA408817|Semah|mKIAA0331	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	protein-coding	0.010000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-1482	chr18	63108743	63108943	+	2.10367	NA	intron (NM_001039485, intron 14 of 53)	intron (NM_001039485, intron 14 of 53)	130927	NM_028017	108123	Mm.292687	NM_028017	ENSMUSG00000024581	Napg	2400003O04Rik|SNARE	N-ethylmaleimide sensitive fusion protein attachment protein gamma	protein-coding	0.005000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-1570	chr19	36925939	36926139	+	2.10367	NA	promoter-TSS (NM_001080706)	promoter-TSS (NM_001080706)	-40	NM_001080706	107182	Mm.295062	NM_001080706	ENSMUSG00000040565	Btaf1	AI414500|AI447930|E430027O22Rik|TAF170	B-TFIID TATA-box binding protein associated factor 1	protein-coding	0.110000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-2606	chr7	75551774	75551974	+	2.10367	NA	intron (NM_029332, intron 2 of 36)	intron (NM_029332, intron 2 of 36)	96340	NM_029332	75547	Mm.216107	NM_029332	ENSMUSG00000066406	Akap13	1700026G02Rik|5730522G15Rik|5830460E08Rik|AKAP-13|AKAP-Lbc|BRX|Ht31|LBC|PROTO-LB|PROTO-LBC	A kinase (PRKA) anchor protein 13	protein-coding	0.000000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-941	chr14	29387741	29387941	+	2.10367	NA	intron (NM_009785, intron 5 of 37)	intron (NM_009785, intron 5 of 37)	334023	NM_009785	12294	Mm.386754	NM_009785	ENSMUSG00000021991	Cacna2d3	Cacnad3|alapha2delta3	calcium channel, voltage-dependent, alpha2/delta subunit 3	protein-coding	0.015000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-595	chr11	104361839	104362039	+	2.10367	NA	intron (NM_001359634, intron 5 of 14)	RLTR19|LTR|ERVK	80352	NM_001081045	76719	Mm.136418	NM_001081045	ENSMUSG00000018412	Kansl1	1700081L11Rik|9430041J06Rik|mKIAA1267	KAT8 regulatory NSL complex subunit 1	protein-coding	0.010000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-2562	chr7	28299014	28299214	+	2.10367	NA	exon (NM_007866, exon 4 of 9)	exon (NM_007866, exon 4 of 9)	2671	NM_007866	13389	Mm.12896	NM_007866	ENSMUSG00000003436	Dll3	pu|pudgy	delta like canonical Notch ligand 3	protein-coding	0.075000	0.636816			
ePOU_nocontrol_ChIP_peaks_unique-636	chr12	4374783	4374983	+	2.10367	NA	intron (NM_010881, intron 2 of 22)	intron (NM_010881, intron 2 of 22)	102299	NM_010881	17977	Mm.301039	NM_010881	ENSMUSG00000020647	Ncoa1	KAT13A|NCoA-1|NRC-1|SRC-1|SRC-a|SRC1|bHLHe74|mNRC-1	nuclear receptor coactivator 1	protein-coding	0.015000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-2622	chr7	92244902	92245102	+	2.10367	NA	intron (NM_001243047, intron 1 of 10)	intron (NM_001243047, intron 1 of 10)	10032	NM_001243047	23859	Mm.147213	NM_011807	ENSMUSG00000052572	Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|Gm21505|PSD93	discs large MAGUK scaffold protein 2	protein-coding	0.010000	0.323383			30(TATTTGTGATGCAGAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1200	chr16	18811755	18811955	+	2.10367	NA	promoter-TSS (NM_011672)	promoter-TSS (NM_011672)	117	NM_001161623	12544	Mm.1248	NM_009862	ENSMUSG00000000028	Cdc45	Cdc45l	cell division cycle 45	protein-coding	0.035000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-1738	chr2	103870306	103870506	+	2.10367	NA	Intergenic	Intergenic	-30545	NR_131913	100996933	Mm.394449	NR_131913		Lincred1	-	long intergenic non-protein coding RNA of erythroid differentiation 1	ncRNA	0.010000	0.353234			-50(TATGTGTCATTTAAAT,+,0.00),-42(ATTTAAATGAGACAGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1318	chr17	21488962	21489162	+	2.10367	NA	promoter-TSS (NM_013843)	promoter-TSS (NM_013843)	74	NM_013843	24132	Mm.42140	NM_013843	ENSMUSG00000057409	Zfp53	D030067O06Rik|KRAZ1|Zfp-53|Zfp118|zfas8	zinc finger protein 53	protein-coding	0.050000	0.557214			
ePOU_nocontrol_ChIP_peaks_unique-290	chr10	36649743	36649943	+	2.10367	NA	intron (NM_001081208, intron 2 of 3)	intron (NM_001081208, intron 2 of 3)	143036	NM_001081208	319415	Mm.332442	NM_001081208	ENSMUSG00000044499	Hs3st5	D930005L05Rik|Gm1151|Hs3ost5	heparan sulfate (glucosamine) 3-O-sulfotransferase 5	protein-coding	0.005000	0.303483			
ePOU_nocontrol_ChIP_peaks_unique-738	chr12	85339192	85339392	+	2.10367	NA	promoter-TSS (NM_145138)	promoter-TSS (NM_145138)	70	NM_145138	217718	Mm.29071	NM_145138	ENSMUSG00000034290	Nek9	C130021H08Rik	NIMA (never in mitosis gene a)-related expressed kinase 9	protein-coding	0.115000	0.721393			
merged_common-114	chr16	86462817	86463017	+	2.10367	NA	Intergenic	Intergenic	343596	NR_153789	102635020	Mm.132956	NR_153789		Gm32461	-	predicted gene, 32461	ncRNA	0.010000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-1799	chr2	141074346	141074546	+	2.10367	NA	intron (NM_001013802, intron 5 of 18)	intron (NM_001013802, intron 5 of 18)	-402970	NM_001172160	71436	Mm.426781	NM_178382	ENSMUSG00000051379	Flrt3	5530600M07Rik|C430047I10Rik|mKIAA1469	fibronectin leucine rich transmembrane protein 3	protein-coding	0.005000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-148	chr1	135467090	135467290	+	2.10367	NA	intron (NM_173437, intron 9 of 28)	intron (NM_173437, intron 9 of 28)	-12507	NR_049188	100885827		NR_049188	ENSMUSG00000093515	Mir1231	Gm23720|mir-1231|mmu-mir-1231	microRNA 1231	ncRNA	0.015000	0.527363			
ePOU_nocontrol_ChIP_peaks_unique-896	chr13	107873480	107873680	+	2.10367	NA	intron (NM_145456, intron 5 of 17)	intron (NM_145456, intron 5 of 17)	16484	NM_145456	67263	Mm.490418	NM_145456		Zswim6	2900036G02Rik|mKIAA1577	zinc finger SWIM-type containing 6	protein-coding	0.005000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-2373	chr5	144247643	144247843	+	2.10367	NA	intron (NM_001163709, intron 1 of 2)	RLTR11A2|LTR|ERVK	3306	NM_001163709	55950	Mm.38011	NM_018772	ENSMUSG00000047843	Bri3	I3	brain protein I3	protein-coding	0.020000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-1580	chr19	40873370	40873570	+	2.10367	NA	intron (NR_045343, intron 1 of 4)	CpG	5154	NR_045343	381223	Mm.136844	NR_045343	ENSMUSG00000097740	E030044B06Rik	E030007J07Rik|Gm1618	RIKEN cDNA E030044B06 gene	ncRNA	0.100000	0.606965			
ePOU_nocontrol_ChIP_peaks_unique-244	chr10	7265497	7265697	+	2.10367	NA	Intergenic	Intergenic	-53360	NM_172546	215748	Mm.37984	NM_172546	ENSMUSG00000015202	Cnksr3	6820402C05|BC024086|Magi1	Cnksr family member 3	protein-coding	0.020000	0.467662			-37(ATTTGCAAGTGAAATT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2894	chr9	64340599	64340799	+	2.10367	NA	promoter-TSS (NM_001177784)	promoter-TSS (NM_001177784)	74	NM_001177784	213550	Mm.268341	NM_172519	ENSMUSG00000032396	Dis3l	AV340375	DIS3 like exosome 3'-5' exoribonuclease	protein-coding	0.090000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-704	chr12	73367631	73367831	+	2.10367	NA	intron (NR_046013, intron 3 of 3)	intron (NR_046013, intron 3 of 3)	41832	NR_046013	380765	Mm.490476	NR_046013	ENSMUSG00000056359	D830013O20Rik	Gm891	RIKEN cDNA D830013O20 gene	ncRNA	0.060000	0.601990			
ePOU_nocontrol_ChIP_peaks_unique-1547	chr19	17631026	17631226	+	2.10367	NA	intron (NM_001190483, intron 9 of 37)	intron (NM_001190483, intron 9 of 37)	206506	NM_001163144	18552	Mm.3401	NM_001163144	ENSMUSG00000024713	Pcsk5	PC5|PC6|SPC6|b2b1549Clo|b2b585Clo	proprotein convertase subtilisin/kexin type 5	protein-coding	0.000000	0.358209			-72(TTTTGCCTAACAAAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2165	chr4	135440208	135440408	+	2.10367	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-6503	NM_022980	53902	Mm.331970	NM_022980	ENSMUSG00000059713	Rcan3	AU041093|Csp3|Dscr1l2	regulator of calcineurin 3	protein-coding	0.005000	0.462687			-77(CCATTCTTATTCAAAC,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2685	chr8	5102956	5103156	+	2.10367	NA	intron (NM_011388, intron 1 of 5)	intron (NM_011388, intron 1 of 5)	2231	NM_011388	20494	Mm.3500	NM_011388	ENSMUSG00000023073	Slc10a2	9130221J18Rik|AI605518|ASBT|IBAT|ISBT	solute carrier family 10, member 2	protein-coding	0.005000	0.402985	-5(AATGAATAATGCATG,+,0.00),-5(AATGAATAATGCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1123	chr15	68363293	68363493	+	2.10367	NA	Intergenic	Intergenic	-22104	NR_029718	387228		NR_029718	ENSMUSG00000065437	Mir30d	Mirn30d|mir-30d|mmu-mir-30d	microRNA 30d	ncRNA	0.105000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-701	chr12	72708556	72708756	+	2.10367	NA	Intergenic	Intergenic	-43828	NM_025522	66375	Mm.289653	NM_025522	ENSMUSG00000021094	Dhrs7	2310016E22Rik|5730564L20Rik|AW061210|Retdsr4|Retsdr4	dehydrogenase/reductase (SDR family) member 7	protein-coding	0.010000	0.328358			
ePOU_nocontrol_ChIP_peaks_unique-488	chr11	57540839	57541039	+	2.10367	NA	Intergenic	Intergenic	22274	NM_145426	216760	Mm.30501	NM_145426	ENSMUSG00000020522	Mfap3	2610509F16Rik|2700079M14Rik|AW536327	microfibrillar-associated protein 3	protein-coding	0.000000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-861	chr13	80689961	80690161	+	2.10367	NA	Intergenic	Intergenic	-193323	NR_153410	105171	Mm.423137	NM_001042591	ENSMUSG00000074794	Arrdc3	AI450344|mKIAA1376	arrestin domain containing 3	protein-coding	0.000000	0.293532			33(ATCTGAATAATAAAAT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1040	chr14	119796567	119796767	+	2.10367	NA	intron (NM_015820, intron 1 of 1)	intron (NM_015820, intron 1 of 1)	47440	NR_045621	75432	Mm.443277	NR_045621	ENSMUSG00000100274	1700006F04Rik	-	RIKEN cDNA 1700006F04 gene	ncRNA	0.000000	0.308458			
ePOU_nocontrol_ChIP_peaks_unique-1989	chr3	116129848	116130048	+	2.10367	NA	promoter-TSS (NM_011693)	promoter-TSS (NM_011693)	-260	NM_011693	22329	Mm.76649	NM_011693	ENSMUSG00000027962	Vcam1	CD106|Vcam-1	vascular cell adhesion molecule 1	protein-coding	0.005000	0.273632			
ePOU_nocontrol_ChIP_peaks_unique-750	chr12	97706092	97706292	+	2.10367	NA	Intergenic	Intergenic	553267	NM_008079	14420	Mm.5120	NM_008079	ENSMUSG00000021003	Galc	2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher	galactosylceramidase	protein-coding	0.000000	0.353234	20(CATGAATAATGCATT,+,0.00),20(CATGAATAATGCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2770	chr8	84192036	84192236	+	2.10367	NA	Intergenic	Intergenic	-13175	NR_029821	723819		NR_029821	ENSMUSG00000065483	Mir181c	Mirn181c|mir-181c	microRNA 181c	ncRNA	0.035000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-2739	chr8	64174873	64175073	+	2.10367	NA	intron (NM_009390, intron 1 of 20)	intron (NM_009390, intron 1 of 20)	31035	NM_009390	21892	Mm.418367	NM_009390	ENSMUSG00000053626	Tll1	Tll|Tll-1|b2b2476Clo	tolloid-like	protein-coding	0.010000	0.373134			-43(TCTTTCTCATGCAATA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1959	chr3	96197322	96197522	+	2.10367	NA	intron (NM_026975, intron 1 of 1)	CpG	164	NM_026975	69168	Mm.104531	NM_026975	ENSMUSG00000015943	Bola1	1810037G04Rik	bolA-like 1 (E. coli)	protein-coding	0.060000	0.582090			
ePOU_nocontrol_ChIP_peaks_unique-1617	chr2	4880924	4881124	+	2.10367	NA	promoter-TSS (NM_175400)	promoter-TSS (NM_175400)	-540	NM_001362709	109079	Mm.34329	NM_175400	ENSMUSG00000026662	Sephs1	1110046B24Rik|AA589574|AI505014|AW111620|SELD|SPS|SPS1	selenophosphate synthetase 1	protein-coding	0.025000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-1330	chr17	26939443	26939643	+	2.10367	NA	promoter-TSS (NM_026307)	promoter-TSS (NM_026307)	-5	NM_026307	67675	Mm.439919	NM_026307	ENSMUSG00000024194	Cuta	0610039D01Rik|1810022E02Rik|1810060C03Rik|2700094G22Rik|AI326454	cutA divalent cation tolerance homolog	protein-coding	0.085000	0.661692			
ePOU_nocontrol_ChIP_peaks_unique-2583	chr7	45814422	45814622	+	2.10367	NA	promoter-TSS (NM_001112701)	promoter-TSS (NM_001112701)	-206	NM_011181	19158	Mm.272130	NM_011181	ENSMUSG00000003269	Cyth2	ARNO|CLM2|Pscd2	cytohesin 2	protein-coding	0.040000	0.542289			
ePOU_nocontrol_ChIP_peaks_unique-2166	chr4	135920533	135920733	+	2.10367	NA	promoter-TSS (NM_024243)	promoter-TSS (NM_024243)	-93	NM_024243	71665	Mm.439940	NM_024243	ENSMUSG00000028673	Fuca1	0610006A03Rik|9530055J05Rik|Afuc|Fuca	fucosidase, alpha-L- 1, tissue	protein-coding	0.065000	0.557214			
ePOU_nocontrol_ChIP_peaks_unique-1081	chr15	33916119	33916319	+	2.10367	NA	Intergenic	Intergenic	-166500	NM_001357925	67154	Mm.130883	NM_026002	ENSMUSG00000022255	Mtdh	2610103J23Rik|3D3|3D3/Lyric|AEG-1|AV353288|D8Bwg1112e|Lyric	metadherin	protein-coding	0.005000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-2522	chr6	133060616	133060816	+	2.10367	NA	Intergenic	(CATATA)n|Simple_repeat|Simple_repeat	-4923	NM_021562	387616	Mm.422613	NM_021562	ENSMUSG00000071147	Tas2r140	T2R40|T2r34|TRB3|TRB5|Tas2r13|Tas2r137|Tas2r40|Tas2r8|mTRB3|mt2r64	taste receptor, type 2, member 140	protein-coding	0.000000	0.293532			-97(ATTTACATATAAATGT,-,0.00),-79(GCTTTCACATGTATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-676	chr12	37507079	37507279	+	2.10367	NA	intron (NM_178767, intron 12 of 12)	intron (NM_178767, intron 12 of 12)	265540	NM_178767	319660	Mm.485540	NM_178767	ENSMUSG00000050103	Agmo	A530016O06Rik|AI790538|Tmem195	alkylglycerol monooxygenase	protein-coding	0.005000	0.318408			51(TATTTAGTTTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1209	chr16	28490900	28491100	+	2.10367	NA	intron (NM_010199, intron 2 of 5)	intron (NM_010199, intron 2 of 5)	-44925	NM_183064	14167	Mm.7996	NM_010199	ENSMUSG00000022523	Fgf12	AV114868|B230343J05Rik|FGF-12|FHF-1|Fhf1	fibroblast growth factor 12	protein-coding	0.000000	0.343284	8(TATGCATATTACATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1036	chr14	112121655	112121855	+	2.10367	NA	Intergenic	Intergenic	446640	NM_198865	75409	Mm.235097	NM_029273	ENSMUSG00000033214	Slitrk5	2610019D03Rik	SLIT and NTRK-like family, member 5	protein-coding	0.005000	0.398010			50(TTTCTGTCTTTCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2776	chr8	86745904	86746104	+	2.10367	NA	promoter-TSS (NM_009172)	promoter-TSS (NM_009172)	2	NM_009172	20437	Mm.324553	NM_009172	ENSMUSG00000036840	Siah1a	AA982064|AI853500|Sinh1a	siah E3 ubiquitin protein ligase 1A	protein-coding	0.190000	0.810945			
ePOU_nocontrol_ChIP_peaks_unique-2286	chr5	88802050	88802250	+	2.10367	NA	Intergenic	Intergenic	37137	NM_007832	13178	Mm.298892	NM_007832	ENSMUSG00000029366	Dck	-	deoxycytidine kinase	protein-coding	0.005000	0.348259			-91(TTTTGAAAAACAAAGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-163	chr1	152817520	152817720	+	2.10367	NA	intron (NM_010877, intron 4 of 15)	intron (NM_010877, intron 4 of 15)	17467	NM_010877	17970	Mm.270307	NM_010877	ENSMUSG00000026480	Ncf2	NOXA2|Ncf-2|p67phox	neutrophil cytosolic factor 2	protein-coding	0.005000	0.427861		-37(CATCAATTTGCATA,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-398	chr10	117106660	117106860	+	2.10367	NA	intron (NM_177798, intron 1 of 9)	intron (NM_177798, intron 1 of 9)	41714	NM_177798	327826	Mm.135965	NM_177798	ENSMUSG00000020170	Frs2	4732458E18|C330018A15Rik|Frs2alpha|SNT1	fibroblast growth factor receptor substrate 2	protein-coding	0.005000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-2850	chr9	25529920	25530120	+	2.10367	NA	intron (NM_026189, intron 2 of 7)	Lx9|LINE|L1	48423	NM_026189	67484	Mm.112977	NM_026189	ENSMUSG00000036611	Eepd1	2310005P05Rik|AI481005	endonuclease/exonuclease/phosphatase family domain containing 1	protein-coding	0.005000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-2049	chr4	10835626	10835826	+	2.10367	NA	Intergenic	Intergenic	9904	NR_037304	100499521		NR_037304	ENSMUSG00000092880	Mir3471-1	mmu-mir-3471-1	microRNA 3471-1	ncRNA	0.005000	0.373134		45(AATCCATATGCAAA,-,0.00)	-83(TTTTTTTTTTTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2989	chrX	94213027	94213227	+	2.10367	NA	promoter-TSS (NM_012010)	promoter-TSS (NM_012010)	-476	NM_012010	26905	Mm.218851	NM_012010	ENSMUSG00000035150	Eif2s3x	AA409828|AA547477|AI314668|Eif-2gx|eIF-2-gamma X	eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	protein-coding	0.075000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-1868	chr3	34559141	34559341	+	2.10367	NA	Intergenic	Intergenic	-1140	NR_015580	320478	Mm.444063	NR_015580	ENSMUSG00000105265	Sox2ot	B230215L15Rik	SOX2 overlapping transcript (non-protein coding)	ncRNA	0.005000	0.338308			-2(CTATAGTGATGGTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2670	chr7	130819643	130819843	+	2.10367	NA	intron (NM_001081038, intron 12 of 15)	intron (NM_001081038, intron 12 of 15)	45674	NM_001081038	330660	Mm.271550	NM_001081038	ENSMUSG00000040298	Btbd16	E330040A16Rik	BTB (POZ) domain containing 16	protein-coding	0.030000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-903	chr13	110708182	110708382	+	2.10367	NA	Intergenic	Tigger16a|DNA|TcMar-Tigger	-195217	NR_131193	75139	Mm.490931	NR_131193	ENSMUSG00000114472	Gm38397	-	predicted gene, 38397	ncRNA	0.005000	0.323383			15(ATTTGAATGAGTGAGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1513	chr19	4046184	4046384	+	2.10367	NA	Intergenic	L1M5|LINE|L1	-4063	NM_181796	14869	Mm.441542	NM_181796	ENSMUSG00000038155	Gstp2	GSTpiA|Gst-3|Gst3	glutathione S-transferase, pi 2	protein-coding	0.045000	0.512438			
ePOU_nocontrol_ChIP_peaks_unique-162	chr1	152574623	152574823	+	2.10367	NA	intron (NM_001346118, intron 4 of 18)	URR1B|DNA|hAT-Charlie	50494	NM_016846	19731	Mm.245270	NM_016846	ENSMUSG00000026482	Rgl1	Rgl|mKIAA0959	ral guanine nucleotide dissociation stimulator,-like 1	protein-coding	0.025000	0.447761			
ePOU_nocontrol_ChIP_peaks_unique-2273	chr5	76327322	76327522	+	2.10367	NA	intron (NM_023508, intron 1 of 5)	intron (NM_023508, intron 1 of 5)	3734	NM_001310637	79455	Mm.143764	NM_023508	ENSMUSG00000029235	Pdcl2	1700010B22Rik|1700016K07Rik|Mgcphlp|Tphlp	phosducin-like 2	protein-coding	0.005000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-1606	chr19	57620455	57620655	+	2.10367	NA	intron (NM_181415, intron 1 of 28)	intron (NM_181415, intron 1 of 28)	9521	NM_181415	226255	Mm.245340	NM_181415	ENSMUSG00000054843	Atrnl1	AI504415|AW555641|Alp|Atrnl|Atrnlp	attractin like 1	protein-coding	0.000000	0.407960		-20(CATGCATATGTAGT,+,0.00),-20(CATGCATATGTAGT,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1286	chr16	86401405	86401605	+	2.10367	NA	Intergenic	Intergenic	405008	NR_153789	102635020	Mm.132956	NR_153789		Gm32461	-	predicted gene, 32461	ncRNA	0.005000	0.363184			
Oct4_nocontrol_ChIP_peaks_unique	chr1	55442162	55442362	+	2.10367	NA	intron (NM_001114663, intron 1 of 5)	B3A|SINE|B2	36316	NM_001114663	227120	Mm.194183	NM_001114663	ENSMUSG00000038349	Plcl1	C230017K02Rik|PLC-L|PLC-L1|PLCE|PLCL|PLDL1|PRIP|PRIP-1	phospholipase C-like 1	protein-coding	0.005000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-2681	chr7	143368493	143368693	+	2.10367	NA	intron (NM_008434, intron 15 of 15)	L1M4|LINE|L1	-37943	NR_045842	71153	Mm.398340	NR_045842	ENSMUSG00000101360	4933417O13Rik	-	RIKEN cDNA 4933417O13 gene	ncRNA	0.025000	0.368159			63(GAATTGTCTTTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-455	chr11	36635413	36635613	+	2.10367	NA	intron (NM_011856, intron 2 of 28)	intron (NM_011856, intron 2 of 28)	308728	NM_011856	23964	Mm.439889	NM_011856	ENSMUSG00000049336	Tenm2	Odz2|Odz3|Ten-2|Ten-m2	teneurin transmembrane protein 2	protein-coding	0.010000	0.358209			-94(ATTTACAAAACAAATG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-85	chr1	74391534	74391734	+	2.10367	NA	promoter-TSS (NM_153088)	promoter-TSS (NM_153088)	25	NM_153088	227292	Mm.165042	NM_153088	ENSMUSG00000026176	Ctdsp1	GIP|NLIIF|Nif3|SCP1	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	protein-coding	0.095000	0.656716			
ePOU_nocontrol_ChIP_peaks_unique-545	chr11	84269044	84269244	+	2.10367	NA	intron (NM_133360, intron 22 of 53)	intron (NM_133360, intron 22 of 53)	73706	NM_133360	107476	Mm.31374	NM_133360	ENSMUSG00000020532	Acaca	A530025K05Rik|Acac|Acc1|Gm738	acetyl-Coenzyme A carboxylase alpha	protein-coding	0.000000	0.298507			
ePOU_nocontrol_ChIP_peaks_unique-56	chr1	54129127	54129327	+	2.10367	NA	intron (NM_001001883, intron 1 of 28)	intron (NM_001001883, intron 1 of 28)	65807	NM_001001883	329152	Mm.132150	NM_172655	ENSMUSG00000042807	Hecw2	A730039N16Rik|D030049F17Rik|Gm971|Nedl2|mKIAA1301	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	protein-coding	0.005000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-2057	chr4	15101680	15101880	+	2.10367	NA	intron (NM_178617, intron 3 of 12)	intron (NM_178617, intron 3 of 12)	47351	NM_178617	69352	Mm.389031	NM_178617	ENSMUSG00000040536	Necab1	1700003H21Rik|Efcbp1|STIP-1	N-terminal EF-hand calcium binding protein 1	protein-coding	0.005000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-1009	chr14	75834389	75834589	+	2.10367	NA	Intergenic	Intergenic	10475	NR_045294	100043189	Mm.426329	NR_045294		Gm4285	-	predicted gene 4285	ncRNA	0.020000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-2316	chr5	110176590	110176790	+	2.10367	NA	promoter-TSS (NR_040431)	promoter-TSS (NR_040431)	-167	NM_001347389	269682	Mm.9392	NM_008146	ENSMUSG00000029502	Golga3	5330413L04|5430416E01Rik|AI449376|AW490576|G1-499-14|Mea-2|Mea2|Mea2/Golga3|repro27	golgi autoantigen, golgin subfamily a, 3	protein-coding	0.030000	0.492537			
merged_common-25	chr10	83697767	83697967	+	2.10367	NA	Intergenic	Intergenic	-24998	NM_001145198	69784	Mm.271188	NM_001145198	ENSMUSG00000087651	1500009L16Rik	2700050C19Rik|OCC-1	RIKEN cDNA 1500009L16 gene	protein-coding	0.010000	0.348259			18(CATATTTTATGCAAAT,+,0.00),50(ATTTGCATGTGTATAT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-386	chr10	107952617	107952817	+	2.10367	NA	intron (NR_131147, intron 1 of 5)	LTR109A2|LTR|ERV1	6072	NR_131147	628877	Mm.363120	NR_131147	ENSMUSG00000112910	Gm29685	-	predicted gene, 29685	ncRNA	0.000000	0.328358			12(ATTTACAAGAAATAGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2118	chr4	87838780	87838980	+	2.10367	NA	intron (NM_027326, intron 5 of 10)	intron (NM_027326, intron 5 of 10)	-32557	NM_001286158	70122	Mm.288898	NM_027326	ENSMUSG00000028496	Mllt3	2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3	protein-coding	0.005000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-2778	chr8	88272535	88272735	+	2.10367	NA	intron (NM_007406, intron 1 of 27)	CpG	232	NM_007406	11513	Mm.288206	NM_007406	ENSMUSG00000031659	Adcy7	AA407758	adenylate cyclase 7	protein-coding	0.115000	0.751244			
ePOU_nocontrol_ChIP_peaks_unique-2735	chr8	60890274	60890474	+	2.10367	NA	promoter-TSS (NR_151662)	promoter-TSS (NR_151662)	-19	NM_001357270	72612	Mm.25263	NM_028299	ENSMUSG00000038005	Hpf1	2700029M09Rik|C230006B22Rik|C4orf27	histone PARylation factor 1	protein-coding	0.105000	0.701493			
ePOU_nocontrol_ChIP_peaks_unique-2116	chr4	86857146	86857346	+	2.10367	NA	intron (NM_009096, intron 1 of 4)	CpG	121	NM_009096	20104	Mm.379007	NM_009096	ENSMUSG00000028495	Rps6	S6R	ribosomal protein S6	protein-coding	0.115000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-2791	chr8	103697263	103697463	+	2.10367	NA	Intergenic	RLTR13D3|LTR|ERVK	93564	NR_045730	71058	Mm.67707	NR_045730	ENSMUSG00000110336	4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA	0.005000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-2208	chr5	23920616	23920816	+	2.10367	NA	intron (NM_001310471, intron 10 of 10)	intron (NM_001310471, intron 10 of 10)	68483	NR_028536	100217436		NR_028536		Snord93	Gm22397|MBII-336	small nucleolar RNA, C/D box 93	snoRNA	0.000000	0.358209	73(AATACATTATTCATA,+,0.00),73(AATACATTATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-664	chr12	33303356	33303556	+	2.10367	NA	intron (NM_001033436, intron 1 of 7)	intron (NM_001033436, intron 1 of 7)	941	NM_001033436	380753	Mm.41540	NM_028139	ENSMUSG00000020564	Atxn7l1	2810423G08Rik|Atxn7l4	ataxin 7-like 1	protein-coding	0.025000	0.467662			36(ATTTGCATGGCTAAGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1352	chr17	35841456	35841656	+	2.10367	NA	promoter-TSS (NM_001010833)	promoter-TSS (NM_001010833)	58	NM_001010833	240087	Mm.218511	NM_001010833	ENSMUSG00000061607	Mdc1	6820401C03|AA413496|Nfbd1|mKIAA0170	mediator of DNA damage checkpoint 1	protein-coding	0.075000	0.592040			
ePOU_nocontrol_ChIP_peaks_unique-1454	chr18	40059698	40059898	+	2.10367	NA	Intergenic	Intergenic	159601	NM_023311	67180	Mm.270382	NM_023311	ENSMUSG00000024487	Yipf5	2610311I19Rik|AA408236|Yip1a	Yip1 domain family, member 5	protein-coding	0.000000	0.343284			75(GCTTTTTCAATCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1725	chr2	91971457	91971657	+	2.10367	NA	Intergenic	Intergenic	-7994	NM_138306	104418	Mm.314923	NM_138306	ENSMUSG00000040479	Dgkz	E130307B02Rik|F730209L11Rik|mDGK[z]	diacylglycerol kinase zeta	protein-coding	0.030000	0.522388			66(ATTTAAATTACAAATC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2447	chr6	61233400	61233600	+	2.10367	NA	intron (NM_183310, intron 1 of 10)	intron (NM_183310, intron 1 of 10)	-52690	NR_040287	100504262	Mm.438066	NR_040287		A730020E08Rik	-	RIKEN cDNA A730020E08 gene	ncRNA	0.005000	0.338308			3(ATATAAATAATAAAAG,-,0.00),48(TTATTCAGATGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2308	chr5	106572478	106572678	+	2.10367	NA	Intergenic	Intergenic	-114412	NM_001005477	104382	Mm.271593	NM_001005477	ENSMUSG00000034384	Barhl2	E130309B19Rik|MBH1	BarH like homeobox 2	protein-coding	0.000000	0.368159	32(AATGAATAATTCATT,+,0.00),32(AATGAATAATTCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2127	chr4	98932198	98932398	+	2.10367	NA	exon (NM_001301414, exon 7 of 9)	exon (NM_001301414, exon 7 of 9)	8488	NM_146144	230484	Mm.371692	NM_146144	ENSMUSG00000028560	Usp1	-	ubiquitin specific peptidase 1	protein-coding	0.030000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-1928	chr3	75957054	75957254	+	2.10367	NA	promoter-TSS (NM_001291069)	promoter-TSS (NM_001291069)	-205	NM_175193	73124	Mm.249232	NM_175193	ENSMUSG00000034109	Golim4	3110027H23Rik|GIMPC|GPP130|Golph4|P138	golgi integral membrane protein 4	protein-coding	0.060000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-259	chr10	14900417	14900617	+	2.10367	NA	Intergenic	Intergenic	140570	NM_008703	18101	Mm.487342	NM_008703	ENSMUSG00000019865	Nmbr	BB182387	neuromedin B receptor	protein-coding	0.010000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-2753	chr8	70906178	70906378	+	2.10367	NA	intron (NM_173013, intron 1 of 6)	CpG	304	NM_173013	270058	Mm.248559	NM_173013	ENSMUSG00000019261	Map1s	6430517J16Rik|Bpy2ip1|Map8|Mtap1s|VCY2IP1	microtubule-associated protein 1S	protein-coding	0.125000	0.741294			
ePOU_nocontrol_ChIP_peaks_unique-2985	chrX	85636326	85636526	+	2.10367	NA	Intergenic	Intergenic	62404	NM_025729	66724	Mm.119646	NM_025729	ENSMUSG00000035476	Tab3	4921526G09Rik|Map3k7ip3|mKIAA4135	TGF-beta activated kinase 1/MAP3K7 binding protein 3	protein-coding	0.000000	0.298507			
ePOU_nocontrol_ChIP_peaks_unique-2762	chr8	77433323	77433523	+	2.10367	NA	intron (NM_001363418, intron 3 of 21)	(CA)n|Simple_repeat|Simple_repeat	18666	NM_001363419	78514	Mm.165974	NM_030113	ENSMUSG00000037148	Arhgap10	A930033B01Rik|PS-GAP|PSGAP|PSGAP-m|PSGAP-s	Rho GTPase activating protein 10	protein-coding	0.010000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-2469	chr6	83775837	83776037	+	2.10367	NA	promoter-TSS (NM_009357)	promoter-TSS (NM_009357)	-125	NM_009357	21766	Mm.28371	NM_009357	ENSMUSG00000014748	Tex261	3110001O07Rik|AA409339|AI480706|AL033351|TEG-261	testis expressed gene 261	protein-coding	0.085000	0.616915			
ePOU_nocontrol_ChIP_peaks_unique-789	chr13	14443894	14444094	+	2.10367	NA	intron (NM_001081348, intron 1 of 28)	intron (NM_001081348, intron 1 of 28)	79232	NM_001081348	94253	Mm.125298	NM_153130	ENSMUSG00000021301	Hecw1	9330116H24Rik|AV273951|E130207I19Rik|Nedl1	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	protein-coding	0.005000	0.348259			
merged_common-103	chr15	90991057	90991257	+	2.10367	NA	intron (NM_001109041, intron 7 of 35)	intron (NM_001109041, intron 7 of 35)	58794	NM_001109041	16564	Mm.41379	NM_016705	ENSMUSG00000022629	Kif21a	-	kinesin family member 21A	protein-coding	0.010000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-183	chr1	167394045	167394245	+	2.10367	NA	promoter-TSS (NM_025569)	promoter-TSS (NM_025569)	-304	NM_025569	66447	Mm.218286	NM_025569	ENSMUSG00000026688	Mgst3	2010012L10Rik|2010306B17Rik|2700004G04Rik|AA516734|GST-III	microsomal glutathione S-transferase 3	protein-coding	0.050000	0.532338			
ePOU_nocontrol_ChIP_peaks_unique-121	chr1	108051037	108051237	+	2.10367	NA	Intergenic	Intergenic	133878	NR_102306	319596	Mm.136054	NR_102306	ENSMUSG00000100457	D830032E09Rik	-	RIKEN cDNA D830032E09 gene	ncRNA	0.000000	0.278607			-75(TGTTTGTTATGATAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-598	chr11	106084365	106084565	+	2.10367	NA	promoter-TSS (NM_011947)	promoter-TSS (NM_011947)	-437	NM_011947	26406	Mm.27041	NM_011947	ENSMUSG00000020700	Map3k3	AW548911|MAPKKK3|Mekk3|mKIAA4031	mitogen-activated protein kinase kinase kinase 3	protein-coding	0.045000	0.597015			
ePOU_nocontrol_ChIP_peaks_unique-2013	chr3	143443726	143443926	+	2.10367	NA	Intergenic	Intergenic	200771	NR_040551	320072	Mm.136397	NR_040551	ENSMUSG00000105923	A830019L24Rik	-	RIKEN cDNA A830019L24 gene	ncRNA	0.005000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-2421	chr6	42551454	42551654	+	2.10367	NA	Intergenic	Intergenic	-12534	NM_001081301	546896	Mm.439626	NM_001081301	ENSMUSG00000071494	Olfr455	EG546896|MOR0-17_p|MOR0-2P|MORO-2|Olfr455-ps1	olfactory receptor 455	protein-coding	0.000000	0.303483	-16(CATGCATTTTGCATA,+,0.00),-16(CATGCATTTTGCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-268	chr10	21087754	21087954	+	2.10367	NA	Intergenic	Intergenic	47034	NM_001177776	52906	Mm.253280	NM_026203	ENSMUSG00000019986	Ahi1	1700015F03Rik|Ahi-1|D10Bwg0629e	Abelson helper integration site 1	protein-coding	0.000000	0.452736			29(ATTTACATAAAAATAT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-272	chr10	23796654	23796854	+	2.10367	NA	promoter-TSS (NM_001358813)	promoter-TSS (NM_001358813)	-232	NM_001358813	76306	Mm.294271	NM_183116	ENSMUSG00000037455	Slc18b1	1110021L09Rik	solute carrier family 18, subfamily B, member 1	protein-coding	0.030000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-1953	chr3	89411902	89412102	+	2.10367	NA	promoter-TSS (NR_155545)	promoter-TSS (NR_155545)	-121	NM_001362375	319945	Mm.258142	NM_177041	ENSMUSG00000042642	Flad1	A930017E24Rik|Pp591	flavin adenine dinucleotide synthetase 1	protein-coding	0.045000	0.497512			
ePOU_nocontrol_ChIP_peaks_unique-1049	chr14	122913016	122913216	+	2.10367	NA	promoter-TSS (NM_145466)	promoter-TSS (NM_145466)	49	NM_145466	223267	Mm.379358	NM_145466	ENSMUSG00000041625	Ggact	A2ld1	gamma-glutamylamine cyclotransferase	protein-coding	0.115000	0.721393			
ePOU_nocontrol_ChIP_peaks_unique-2637	chr7	101896715	101896915	+	2.10367	NA	intron (NM_001291349, intron 1 of 4)	intron (NM_001291349, intron 1 of 4)	484	NM_001291348	75430	Mm.284491	NM_027532	ENSMUSG00000030649	Anapc15	3200002M19Rik|6330414C15Rik|APC15	anaphase prompoting complex C subunit 15	protein-coding	0.045000	0.497512			
ePOU_nocontrol_ChIP_peaks_unique-555	chr11	86839794	86839994	+	2.10367	NA	Intergenic	Intergenic	12764	NR_162780	114483630		NR_162780		Mir12182	mmu-mir-12182	microRNA mir-12182	ncRNA	0.005000	0.437811			-96(ATATGAATGGAAATGG,-,0.00),-65(TATTTCTTATTCAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2489	chr6	99811185	99811385	+	2.10367	NA	Intergenic	ORR1D2-int|LTR|ERVL-MaLR	-84893	NM_015768	50501	Mm.87365	NM_015768	ENSMUSG00000030069	Prok2	Bv8|PK2|Prok1	prokineticin 2	protein-coding	0.010000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-2324	chr5	114824321	114824521	+	2.10367	NA	promoter-TSS (NM_181075)	promoter-TSS (NM_181075)	-953	NM_181075	330173	Mm.482205	NM_181075	ENSMUSG00000072694	2610524H06Rik	-	RIKEN cDNA 2610524H06 gene	protein-coding	0.025000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-948	chr14	32246108	32246308	+	2.10367	NA	intron (NM_011960, intron 9 of 17)	intron (NM_011960, intron 9 of 17)	44237	NM_001359915	26430	Mm.15962	NM_011960	ENSMUSG00000021911	Parg	AI413217	poly (ADP-ribose) glycohydrolase	protein-coding	0.010000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-2215	chr5	29244779	29244979	+	2.10367	NA	intron (NM_020295, intron 15 of 16)	L1MEg|LINE|L1	48886	NR_110371	56874	Mm.87352	NM_021470	ENSMUSG00000029130	Rnf32	1700009J01Rik|2700025B22Rik|4930542N22Rik|Lmbr2	ring finger protein 32	protein-coding	0.000000	0.358209			64(ATCTGCATAAGAATTC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-83	chr1	72538280	72538480	+	2.10367	NA	Intergenic	Intergenic	-1221	NM_001045533	381270	Mm.337023	NM_001045533	ENSMUSG00000039372	March4	BC056494|mKIAA1399	membrane-associated ring finger (C3HC4) 4	protein-coding	0.005000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-2004	chr3	126644814	126645014	+	2.10367	NA	intron (NM_001025438, intron 2 of 18)	intron (NM_001025438, intron 2 of 18)	47963	NM_001293666	108058	Mm.255822	NM_023813	ENSMUSG00000053819	Camk2d	2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII	calcium/calmodulin-dependent protein kinase II, delta	protein-coding	0.000000	0.248756			
ePOU_nocontrol_ChIP_peaks_unique-2431	chr6	50011822	50012022	+	2.10367	NA	Intergenic	Intergenic	-98319	NM_001164734	56524	Mm.41288	NM_008016	ENSMUSG00000038388	Mpp6	P55t|Pals2	membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)	protein-coding	0.005000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-1419	chr18	6636267	6636467	+	2.10367	NA	intron (NM_027598, intron 9 of 9)	intron (NM_027598, intron 9 of 9)	32738	NM_027598	70901	Mm.158484	NM_027598	ENSMUSG00000039540	4921524L21Rik	-	RIKEN cDNA 4921524L21 gene	protein-coding	0.015000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-1522	chr19	5610005	5610205	+	2.10367	NA	promoter-TSS (NM_001199248)	promoter-TSS (NM_001199248)	-11	NM_001199248	81601	Mm.228930	NM_178637	ENSMUSG00000024926	Kat5	AI839539|CPLA2|Htatip|Htatip1|PLIP|Tip55|Tip60	K(lysine) acetyltransferase 5	protein-coding	0.050000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-1131	chr15	74721085	74721285	+	2.10367	NA	promoter-TSS (NM_198607)	promoter-TSS (NM_198607)	-49	NM_198607	223626	Mm.268603	NM_198607	ENSMUSG00000056665	Them6	4930572J05Rik	thioesterase superfamily member 6	protein-coding	0.075000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-2148	chr4	120137840	120138040	+	2.10367	NA	Intergenic	Intergenic	-23266	NM_007902	13615	Mm.284855	NM_007902	ENSMUSG00000028635	Edn2	ET-2|PPET2|VIC	endothelin 2	protein-coding	0.015000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-2831	chr9	13690555	13690755	+	2.10367	NA	intron (NM_173776, intron 1 of 3)	intron (NM_173776, intron 1 of 3)	28195	NM_173776	270118	Mm.116898	NM_173776	ENSMUSG00000031925	Maml2	5930431H10|BC032967	mastermind like transcriptional coactivator 2	protein-coding	0.005000	0.437811			15(GATTTGTTTTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1294	chr16	94569635	94569835	+	2.10367	NA	promoter-TSS (NM_007890)	promoter-TSS (NM_007890)	-471	NM_007890	13548	Mm.310973	NM_007890	ENSMUSG00000022897	Dyrk1a	2310043O08Rik|D16Ertd272e|D16Ertd493e|Dyrk|Gm10783|Mnbh|Mp86|mmb	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a	protein-coding	0.100000	0.582090			
ePOU_nocontrol_ChIP_peaks_unique-253	chr10	11747096	11747296	+	2.10367	NA	Intergenic	ORR1B1-int|LTR|ERVL-MaLR	137972	NM_013898	30058	Mm.214504	NM_013898	ENSMUSG00000048007	Timm8a1	DXHXS1274E|Ddp1|Fci-12|Tim8a|Timm8a	translocase of inner mitochondrial membrane 8A1	protein-coding	0.000000	0.432836			
merged_common-209	chr6	87545650	87545850	+	2.10367	NA	Intergenic	MLTR25A|LTR|ERVK	-12491	NM_001286610	232201	Mm.119564	NM_175476	ENSMUSG00000030047	Arhgap25	A130039I20Rik	Rho GTPase activating protein 25	protein-coding	0.000000	0.432836			65(ATTTACATATCAATTT,-,0.00),82(ATTTACATATCAAAGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2561	chr7	27508051	27508251	+	2.10367	NA	intron (NM_198048, intron 5 of 6)	CpG-12884	8827	NM_198048	19153	Mm.10119	NM_019412	ENSMUSG00000053198	Prx	L-Periaxin	periaxin	protein-coding	0.065000	0.631841			
ePOU_nocontrol_ChIP_peaks_unique-436	chr11	22347571	22347771	+	2.10367	NA	Intergenic	Intergenic	-60876	NM_001252515	216565	Mm.491265	NM_153078	ENSMUSG00000042302	Ehbp1	AF424697|Flj21950|NACSIN	EH domain binding protein 1	protein-coding	0.025000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-1168	chr15	100038565	100038765	+	2.10367	NA	promoter-TSS (NM_001159361)	promoter-TSS (NM_001159361)	1	NM_001159361	239667	Mm.243658	NM_172819	ENSMUSG00000023026	Dip2b	4932422C22|AI317237|AI854602|mKIAA1463	disco interacting protein 2 homolog B	protein-coding	0.160000	0.791045			
ePOU_nocontrol_ChIP_peaks_unique-1173	chr15	103396214	103396414	+	2.10367	NA	Intergenic	Intergenic	-29523	NM_001314041	16402	Mm.16234	NM_010577	ENSMUSG00000000555	Itga5	Cd49e|Fnra|VLA5	integrin alpha 5 (fibronectin receptor alpha)	protein-coding	0.000000	0.358209			77(CTTCTGTTATGAAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2162	chr4	133813771	133813971	+	2.10367	NA	Intergenic	CpG	-57102	NM_001363070	93760	Mm.22478	NM_001080819	ENSMUSG00000007880	Arid1a	1110030E03Rik|BAF250a|Osa1|Smarcf1	AT rich interactive domain 1A (SWI-like)	protein-coding	0.130000	0.711443			
ePOU_nocontrol_ChIP_peaks_unique-352	chr10	80755058	80755258	+	2.10367	NA	promoter-TSS (NM_199322)	promoter-TSS (NM_199322)	-45	NM_199322	208266	Mm.152371	NM_199322	ENSMUSG00000061589	Dot1l	A630076O07|AW907654|Dot1|KMT4|mDot1	DOT1-like, histone H3 methyltransferase (S. cerevisiae)	protein-coding	0.155000	0.781095			
ePOU_nocontrol_ChIP_peaks_unique-778	chr12	119407382	119407582	+	2.10367	NA	Intergenic	Intergenic	-35928	NM_001163136	238455	Mm.31376	NM_001163136	ENSMUSG00000041886	Macc1	4732474O15Rik|Gm267	metastasis associated in colon cancer 1	protein-coding	0.010000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-2180	chr4	149445312	149445512	+	2.10367	NA	Intergenic	CpG	9556	NM_022020	63954	Mm.46023	NM_022020	ENSMUSG00000028996	Rbp7	1110002J23Rik|CRBP-III	retinol binding protein 7, cellular	protein-coding	0.070000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-564	chr11	92607404	92607604	+	2.10367	NA	Intergenic	Intergenic	-490862	NM_001361707	72605	Mm.342160	NM_028296	ENSMUSG00000056158	Car10	2700029L05Rik|BB085816|Ca10	carbonic anhydrase 10	protein-coding	0.005000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-2328	chr5	118459066	118459266	+	2.10367	NA	Intergenic	Intergenic	-101553	NM_172424	76199	Mm.206238	NM_172424	ENSMUSG00000018076	Med13l	2210413I17Rik|6330591G05Rik|9030618F05Rik|Thrap2|Trap240L|mKIAA1025	mediator complex subunit 13-like	protein-coding	0.025000	0.517413			
ePOU_nocontrol_ChIP_peaks_unique-1121	chr15	66103378	66103578	+	2.10367	NA	intron (NM_152923, intron 1 of 14)	intron (NM_152923, intron 1 of 14)	-126674	NM_001145096	654498	Mm.364550	NM_001145096	ENSMUSG00000072511	Hhla1	F930104E18Rik	HERV-H LTR-associating 1	protein-coding	0.005000	0.333333			16(ACATTGTTATGCAATC,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1086	chr15	36716057	36716257	+	2.10367	NA	Intergenic	Intergenic	74775	NM_001253807	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding	0.025000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-2453	chr6	67175560	67175760	+	2.10367	NA	Intergenic	RLTR13D5|LTR|ERVK	-91319	NM_025814	66870	Mm.240490	NM_025814	ENSMUSG00000036371	Serbp1	1200009K13Rik|9330147J08Rik|AL022786|Pairbp1	serpine1 mRNA binding protein 1	protein-coding	0.015000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-1734	chr2	103034480	103034680	+	2.10367	NA	intron (NM_175094, intron 6 of 10)	intron (NM_175094, intron 6 of 10)	38933	NM_175094	27402	Mm.315011	NM_175094	ENSMUSG00000010914	Pdhx	AI481367|E3bp|Pdx1	pyruvate dehydrogenase complex, component X	protein-coding	0.015000	0.363184	-8(TATGAATTATTCAAA,+,0.00),-8(TATGAATTATTCAAA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2908	chr9	72985445	72985645	+	2.10367	NA	promoter-TSS (NM_001114328)	promoter-TSS (NM_001114328)	41	NM_001359295	72278	Mm.268475	NM_028181	ENSMUSG00000034563	Ccpg1	1700030B06Rik|1810073J13Rik|9430028F23Rik|AI426686|AI875170|CPR8|D9Ertd392e	cell cycle progression 1	protein-coding	0.115000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-2863	chr9	43044236	43044436	+	2.10367	NA	intron (NM_001359232, intron 1 of 40)	intron (NM_001359232, intron 1 of 40)	61382	NM_027144	69632	Mm.275266	NM_027144	ENSMUSG00000059495	Arhgef12	2310014B11Rik|AU019857|Larg|mKIAA0382	Rho guanine nucleotide exchange factor (GEF) 12	protein-coding	0.010000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-1281	chr16	82038575	82038775	+	2.10367	NA	Intergenic	Intergenic	837978	NM_001113208	17968	Mm.433941	NM_010954	ENSMUSG00000022762	Ncam2	Ncam-2|Ocam|RNCAM	neural cell adhesion molecule 2	protein-coding	0.015000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-1071	chr15	22928892	22929092	+	2.10367	NA	Intergenic	Intergenic	-107471	NM_001081299	320865	Mm.241965	NM_001081299	ENSMUSG00000040420	Cdh18	B230220E17Rik|Cdh14l|Tg(GFAP-APOE_i4)1Hol	cadherin 18	protein-coding	0.000000	0.303483			
ePOU_nocontrol_ChIP_peaks_unique-1795	chr2	137939078	137939278	+	2.10367	NA	Intergenic	Intergenic	-317406	NM_001025431	228662	Mm.153405	NM_145534	ENSMUSG00000062098	Btbd3	mKIAA0952	BTB (POZ) domain containing 3	protein-coding	0.020000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-554	chr11	86624226	86624426	+	2.10367	NA	intron (NM_029478, intron 7 of 11)	intron (NM_029478, intron 7 of 11)	-40168	NR_029738	387140		NR_029738	ENSMUSG00000065455	Mir21a	Mir21|Mirn21|mmu-mir-21|mmu-mir-21a	microRNA 21a	ncRNA	0.015000	0.427861			-67(ATCTACATGACAAGAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1493	chr18	70053116	70053316	+	2.10367	NA	5' UTR (NM_030554, exon 1 of 6)	5' UTR (NM_030554, exon 1 of 6)	372	NM_030554	80718	Mm.246753	NM_030554	ENSMUSG00000024511	Rab27b	2310021G14Rik|B130064M09Rik	RAB27B, member RAS oncogene family	protein-coding	0.095000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-1015	chr14	79115172	79115372	+	2.10367	NA	intron (NM_027906, intron 37 of 44)	B3|SINE|B2	83918	NR_152203	100043765	Mm.435553	NR_152203	ENSMUSG00000115111	Gm4632	-	predicted gene 4632	ncRNA	0.015000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-1701	chr2	69897248	69897448	+	2.10367	NA	exon (NM_001303033, exon 1 of 39)	exon (NM_001303033, exon 1 of 39)	102	NM_001303033	68795	Mm.314576	NM_177783	ENSMUSG00000044308	Ubr3	1110059H15Rik|4833421P10Rik|A130030D10Rik|AA409735|AA414972|AA422631|AI646861|AU016126|Zfp650|Znf650	ubiquitin protein ligase E3 component n-recognin 3	protein-coding	0.135000	0.746269			
ePOU_nocontrol_ChIP_peaks_unique-1765	chr2	125500719	125500919	+	2.10367	NA	intron (NM_007993, intron 2 of 65)	intron (NM_007993, intron 2 of 65)	5619	NM_007993	14118	Mm.271644	NM_007993	ENSMUSG00000027204	Fbn1	AI536462|B430209H23|Fib-1|Tsk	fibrillin 1	protein-coding	0.000000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-1480	chr18	62548643	62548843	+	2.10367	NA	promoter-TSS (NM_177829)	promoter-TSS (NM_177829)	120	NM_134136	107035	Mm.21295	NM_134136	ENSMUSG00000042211	Fbxo38	6030410I24Rik|AU044865|AW214031|Moka|SP329	F-box protein 38	protein-coding	0.105000	0.651741			
ePOU_nocontrol_ChIP_peaks_unique-271	chr10	23322492	23322692	+	2.10367	NA	intron (NM_001347372, intron 2 of 18)	intron (NM_001347372, intron 2 of 18)	27298	NM_001347372	14051	Mm.332128	NM_010167	ENSMUSG00000010461	Eya4	B130023L16Rik	EYA transcriptional coactivator and phosphatase 4	protein-coding	0.005000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-166	chr1	153620952	153621152	+	2.10367	NA	Intergenic	Intergenic	-31985	NM_026380	67792	Mm.379143	NM_026380	ENSMUSG00000042671	Rgs8	6530413N01Rik	regulator of G-protein signaling 8	protein-coding	0.005000	0.308458			
ePOU_nocontrol_ChIP_peaks_unique-219	chr1	183705910	183706110	+	2.10367	NA	Intergenic	Intergenic	-42967	NR_151520	102637191	Mm.417076	NR_151520	ENSMUSG00000103305	Gm34068	-	predicted gene, 34068	ncRNA	0.000000	0.318408	-24(CATGCATAATTCATA,+,0.00),-24(CATGCATAATTCATA,-,0.00)	-17(AATTCATATGCATT,+,0.00),-17(AATTCATATGCATT,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1444	chr18	31817338	31817538	+	2.10367	NA	intron (NM_028866, intron 1 of 21)	L1ME1|LINE|L1	13381	NM_001170967	74320	Mm.277705	NM_028866	ENSMUSG00000024400	Wdr33	1110001N06Rik|2310011G05Rik|2810021O11Rik|8430413N20Rik|WDC146	WD repeat domain 33	protein-coding	0.000000	0.308458			-37(GTAGTTTCATTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2301	chr5	102998381	102998581	+	2.10367	NA	intron (NM_001310685, intron 2 of 11)	intron (NM_001310685, intron 2 of 11)	59911	NM_001310686	26414	Mm.39253	NM_009158	ENSMUSG00000046709	Mapk10	C230008H04Rik|JNK3|JNK3B1|JNK3B2|SAPK(beta)|Serk2|p493F12|p54bSAPK	mitogen-activated protein kinase 10	protein-coding	0.010000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-2131	chr4	100910573	100910773	+	2.10367	NA	intron (NM_198037, intron 3 of 26)	intron (NM_198037, intron 3 of 26)	133994	NM_198037	320508	Mm.151962	NM_198037	ENSMUSG00000028532	Cachd1	1190007F10Rik|AI852726|B430218L07Rik|Vwcd1|mKIAA1573	cache domain containing 1	protein-coding	0.015000	0.437811			44(ATTTGCCTGGCAAATC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2113	chr4	86710556	86710756	+	2.10367	NA	Intergenic	MLTR25A|LTR|ERVK	-37899	NM_184088	329877	Mm.273718	NM_184088	ENSMUSG00000038024	Dennd4c	1700065A05Rik|AA420392	DENN/MADD domain containing 4C	protein-coding	0.005000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-2820	chr8	126602617	126602817	+	2.10367	NA	Intergenic	Intergenic	-8731	NM_001164598	270110	Mm.334918	NM_001164598	ENSMUSG00000051495	Irf2bp2	E130305N23Rik|IRF-2BP2	interferon regulatory factor 2 binding protein 2	protein-coding	0.015000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-2220	chr5	31054659	31054859	+	2.10367	NA	promoter-TSS (NM_001289523)	promoter-TSS (NM_001289523)	-21	NM_023525	69719	Mm.305535	NM_023525	ENSMUSG00000013629	Cad	2410008J01Rik|AU018859|Cpad	carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	protein-coding	0.095000	0.701493			
ePOU_nocontrol_ChIP_peaks_unique-915	chr13	117722379	117722579	+	2.10367	NA	intron (NM_010408, intron 2 of 7)	intron (NM_010408, intron 2 of 7)	-2468	NR_045508	71100	Mm.414841	NR_045508	ENSMUSG00000079048	4933413L06Rik	-	RIKEN cDNA 4933413L06 gene	ncRNA	0.000000	0.303483			6(ATTTTTTCATACAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2015	chr3	143650724	143650924	+	2.10367	NA	Intergenic	Intergenic	61319	NR_040405	621809	Mm.360134	NR_040405	ENSMUSG00000105279	Gm6260	EG621809	predicted gene 6260	ncRNA	0.000000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-681	chr12	46746226	46746426	+	2.10367	NA	intron (NM_001364639, intron 2 of 4)	intron (NM_001364639, intron 2 of 4)	72441	NM_001364637	664883	Mm.247195	NM_021361	ENSMUSG00000021047	Nova1	9430099M15Rik|G630039L02|Nova-1	neuro-oncological ventral antigen 1	protein-coding	0.000000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-2466	chr6	82820913	82821113	+	2.10367	NA	Intergenic	Intergenic	-46559	NM_013820	15277	Mm.255848	NM_013820	ENSMUSG00000000628	Hk2	AI642394|HKII	hexokinase 2	protein-coding	0.005000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-2502	chr6	109276955	109277155	+	2.10367	NA	Intergenic	L1MA5|LINE|L1	448414	NM_138677	192193	Mm.21596	NM_138677	ENSMUSG00000030104	Edem1	A130059K23Rik|EDEM|mKIAA0212	ER degradation enhancer, mannosidase alpha-like 1	protein-coding	0.000000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-149	chr1	136638994	136639194	+	2.10367	NA	Intergenic	Intergenic	14193	NM_001160251	226442	Mm.62521	NM_177643	ENSMUSG00000041483	Zfp281	Znf281	zinc finger protein 281	protein-coding	0.020000	0.393035			-40(ATTTTGCAATGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1993	chr3	118526680	118526880	+	2.10367	NA	Intergenic	L1M5|LINE|L1	-35400	NM_170778	99586	Mm.27907	NM_170778	ENSMUSG00000033308	Dpyd	AI315208|DHPDHase|DPD|E330028L06Rik	dihydropyrimidine dehydrogenase	protein-coding	0.000000	0.283582			-12(CATTTGTGATTTTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1831	chr2	167679878	167680078	+	2.10367	NA	Intergenic	Intergenic	-8937	NM_009883	12608	Mm.439656	NM_009883	ENSMUSG00000056501	Cebpb	C/EBPbeta|CRP2|IL-6DBP|LAP|LIP|NF-IL6|NF-M|Nfil6	CCAAT/enhancer binding protein (C/EBP), beta	protein-coding	0.005000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-68	chr1	61418623	61418823	+	2.10367	NA	Intergenic	Intergenic	40291	NR_040483	77341	Mm.402964	NR_040483	ENSMUSG00000085447	9530026F06Rik	-	RIKEN cDNA 9530026F06 gene	ncRNA	0.010000	0.422886	37(TATGAATAATAAATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-765	chr12	108453879	108454079	+	2.10367	NA	intron (NM_001364196, intron 1 of 22)	intron (NM_001364196, intron 1 of 22)	29942	NM_001364196	68519	Mm.236645	NM_001043335	ENSMUSG00000058070	Eml1	1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAP-1|EMAPL|heco	echinoderm microtubule associated protein like 1	protein-coding	0.010000	0.517413			
ePOU_nocontrol_ChIP_peaks_unique-1722	chr2	85060568	85060768	+	2.10367	NA	intron (NM_001081260, intron 5 of 11)	MIR3|SINE|MIR	10208	NM_001081260	228140	Mm.23606	NM_001081260	ENSMUSG00000033955	Tnks1bp1	Tab182|mKIAA1741	tankyrase 1 binding protein 1	protein-coding	0.025000	0.527363			
ePOU_nocontrol_ChIP_peaks_unique-733	chr12	84175629	84175829	+	2.10367	NA	intron (NM_001163501, intron 1 of 12)	intron (NM_001163501, intron 1 of 12)	18286	NM_001163502	238317	Mm.31256	NM_001163501	ENSMUSG00000042507	Elmsan1	9430029N19Rik|C130039O16Rik|Gm260	ELM2 and Myb/SANT-like domain containing 1	protein-coding	0.060000	0.631841			
ePOU_nocontrol_ChIP_peaks_unique-1347	chr17	31371189	31371389	+	2.10367	NA	Intergenic	L1MC3|LINE|L1	-14945	NM_008804	18585	Mm.10812	NM_008804	ENSMUSG00000041119	Pde9a	PDE9A1	phosphodiesterase 9A	protein-coding	0.000000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-2114	chr4	86748433	86748633	+	2.10367	NA	promoter-TSS (NM_184088)	promoter-TSS (NM_184088)	-22	NM_184088	329877	Mm.273718	NM_184088	ENSMUSG00000038024	Dennd4c	1700065A05Rik|AA420392	DENN/MADD domain containing 4C	protein-coding	0.060000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-2730	chr8	53585567	53585767	+	2.10367	NA	Intergenic	Intergenic	53398	NM_146208	234258	Mm.281749	NM_146208	ENSMUSG00000039396	Neil3	AI449477|BC034753|C85903	nei like 3 (E. coli)	protein-coding	0.015000	0.348259			17(TGTTTGTTATGTTGAT,+,0.00),36(TGTTTGTTATGCTAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2864	chr9	43221580	43221780	+	2.10367	NA	3' UTR (NM_178644, exon 4 of 4)	3' UTR (NM_178644, exon 4 of 4)	-15925	NM_011139	18988	Mm.436650	NM_011139	ENSMUSG00000032015	Pou2f3	Epoc-1|Oct-11a|Oct11|Otf-11|Otf11|Skin|Skin-1a|Skn-1a|Skn-li	POU domain, class 2, transcription factor 3	protein-coding	0.025000	0.492537			
ePOU_nocontrol_ChIP_peaks_unique-2698	chr8	22398338	22398538	+	2.10367	NA	promoter-TSS (NR_045473)	promoter-TSS (NR_045473)	-161	NM_001358971	18408	Mm.200907	NM_181325	ENSMUSG00000031482	Slc25a15	D630044L02Rik|Ornt1	solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15	protein-coding	0.160000	0.786070			
ePOU_nocontrol_ChIP_peaks_unique-573	chr11	96943959	96944159	+	2.10367	NA	promoter-TSS (NR_003293)	promoter-TSS (NR_003293)	-40	NM_134021	103711	Mm.254704	NM_134021	ENSMUSG00000018659	Pnpo	AI415282	pyridoxine 5'-phosphate oxidase	protein-coding	0.025000	0.542289			
ePOU_nocontrol_ChIP_peaks_unique-2455	chr6	67269577	67269777	+	2.10367	NA	intron (NM_001113565, intron 1 of 7)	intron (NM_001113565, intron 1 of 7)	2698	NM_001113565	66870	Mm.240490	NM_025814	ENSMUSG00000036371	Serbp1	1200009K13Rik|9330147J08Rik|AL022786|Pairbp1	serpine1 mRNA binding protein 1	protein-coding	0.005000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-432	chr11	19759417	19759617	+	2.10367	NA	Intergenic	Intergenic	-164925	NM_033523	114716	Mm.266627	NM_033523	ENSMUSG00000045671	Spred2	C79158	sprouty-related EVH1 domain containing 2	protein-coding	0.005000	0.497512			
ePOU_nocontrol_ChIP_peaks_unique-2723	chr8	46847075	46847275	+	2.10367	NA	non-coding (NR_152560, exon 8 of 8)	non-coding (NR_152560, exon 8 of 8)	107430	NR_152560	16363	Mm.1149	NM_008391	ENSMUSG00000031627	Irf2	9830146E22Rik|AI646973|Irf-2	interferon regulatory factor 2	protein-coding	0.015000	0.288557			-57(AAACTGTCATGGAAAT,+,0.00),-46(GAAATATTATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-31	chr1	33719984	33720184	+	2.10367	NA	promoter-TSS (NM_001159729)	promoter-TSS (NM_001159729)	188	NM_008999	19335	Mm.86744	NM_008999	ENSMUSG00000004768	Rab23	AW545388|opb|opb2	RAB23, member RAS oncogene family	protein-coding	0.130000	0.701493			
ePOU_nocontrol_ChIP_peaks_unique-152	chr1	138547829	138548029	+	2.10367	NA	intron (NM_001311148, intron 2 of 7)	intron (NM_001311148, intron 2 of 7)	71828	NM_001311148	59125	Mm.143817	NM_021605	ENSMUSG00000026393	Nek7	2810460C19Rik|AU020186	NIMA (never in mitosis gene a)-related expressed kinase 7	protein-coding	0.030000	0.502488			-28(ATTTGCATGTCAGATC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2879	chr9	56167553	56167753	+	2.10367	NA	Intergenic	Intergenic	-6583	NM_019793	56434	Mm.28484	NM_019793	ENSMUSG00000032324	Tspan3	1700055K04Rik|TM4-A|Tm4sf8	tetraspanin 3	protein-coding	0.015000	0.358209	41(TTTGCATAATGCATT,+,0.00),41(TTTGCATAATGCATT,-,0.00),48(AATGCATTATTCTTT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1437	chr18	25065315	25065515	+	2.10367	NA	intron (NM_175276, intron 15 of 26)	intron (NM_175276, intron 15 of 26)	100550	NM_001142697	66648	Mm.263189	NM_001004361	ENSMUSG00000024269	Tpgs2	5730437P09Rik|5730494M16Rik|AI666318|Pgs2	tubulin polyglutamylase complex subunit 2	protein-coding	0.015000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-2692	chr8	11497630	11497830	+	2.10367	NA	exon (NM_026995, exon 1 of 10)	exon (NM_026995, exon 1 of 10)	162	NM_026995	69225	Mm.64911	NM_026995	ENSMUSG00000031505	Naxd	0710008K08Rik|2810407E01Rik|Carkd	NAD(P)HX dehydratase	protein-coding	0.150000	0.736318			
ePOU_nocontrol_ChIP_peaks_unique-2470	chr6	83915541	83915741	+	2.10367	NA	intron (NM_008717, intron 1 of 26)	intron (NM_008717, intron 1 of 26)	1288	NM_008717	18139	Mm.132392	NM_008717	ENSMUSG00000030016	Zfp638	AI323587|Np220|Zfml|Znf638|mNP220	zinc finger protein 638	protein-coding	0.005000	0.283582			
ePOU_nocontrol_ChIP_peaks_unique-1499	chr18	74268124	74268324	+	2.10367	NA	promoter-TSS (NM_001357423)	promoter-TSS (NM_001357423)	49	NM_001357423	17190	Mm.22522	NM_013594	ENSMUSG00000024561	Mbd1	Cxxc3|PCM1	methyl-CpG binding domain protein 1	protein-coding	0.095000	0.646766			
Oct4_nocontrol_ChIP_peaks_unique-24	chr12	104751997	104752197	+	2.10367	NA	promoter-TSS (NM_148948)	promoter-TSS (NM_148948)	-145	NM_148948	192119	Mm.21135	NM_148948	ENSMUSG00000041415	Dicer1	1110006F08Rik|D12Ertd7e|mKIAA0928	dicer 1, ribonuclease type III	protein-coding	0.160000	0.746269			
ePOU_nocontrol_ChIP_peaks_unique-2121	chr4	89310686	89310886	+	2.10367	NA	exon (NM_007670, exon 1 of 2)	exon (NM_007670, exon 1 of 2)	246	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin dependent kinase inhibitor 2B	protein-coding	0.095000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-482	chr11	52618824	52619024	+	2.10367	NA	Intergenic	Intergenic	-145782	NM_177059	320027	Mm.44518	NM_177059	ENSMUSG00000036264	Fstl4	B230374F23Rik|SPIG1|mKIAA1061	follistatin-like 4	protein-coding	0.035000	0.472637			
ePOU_nocontrol_ChIP_peaks_unique-2933	chr9	96573076	96573276	+	2.10367	NA	intron (NM_053268, intron 9 of 23)	B3|SINE|B2	-47912	NM_001370882	102635744		NM_001370882	ENSMUSG00000099564	Gm28729	-	predicted gene 28729	protein-coding	0.005000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-2901	chr9	67415557	67415757	+	2.10367	NA	intron (NM_001081242, intron 2 of 57)	intron (NM_001081242, intron 2 of 57)	144046	NM_001081242	70549	Mm.33645	NM_027458	ENSMUSG00000052698	Tln2	5730421P04Rik|AI507121|AI787438|AL118320|mKIAA0320	talin 2	protein-coding	0.005000	0.358209			8(ATTTGAATCCTAATGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1350	chr17	35121288	35121488	+	2.10367	NA	promoter-TSS (NM_001303445)	promoter-TSS (NM_001303445)	41	NM_001303445	13001	Mm.378901	NM_009975	ENSMUSG00000024387	Csnk2b	CK II beta	casein kinase 2, beta polypeptide	protein-coding	0.100000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-480	chr11	50769552	50769752	+	2.10367	NA	intron (NM_175643, intron 5 of 21)	intron (NM_175643, intron 5 of 21)	58079	NM_013922	30944	Mm.103674	NM_013922	ENSMUSG00000044807	Zfp354c	5330421P20Rik|AJ18|AW743325|Kid3|Tcf17l2|Znf354c|mKIAA4218	zinc finger protein 354C	protein-coding	0.025000	0.557214			
ePOU_nocontrol_ChIP_peaks_unique-2986	chrX	85720103	85720303	+	2.10367	NA	intron (NM_212444, intron 12 of 19)	intron (NM_212444, intron 12 of 19)	56616	NM_001294138	14933	Mm.246682	NM_008194	ENSMUSG00000025059	Gk	D930012N15Rik|Gyk	glycerol kinase	protein-coding	0.005000	0.328358	-38(TATGCATAATGGACG,+,0.00),-38(TATGCATAATGGACG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1627	chr2	14295509	14295709	+	2.10367	NA	intron (NM_008625, intron 15 of 29)	intron (NM_008625, intron 15 of 29)	34606	NR_030609	100124488		NR_030609	ENSMUSG00000077897	Mir511	Mirn511|mir-511|mmu-mir-511	microRNA 511	ncRNA	0.015000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-1277	chr16	78302824	78303024	+	2.10367	NA	intron (NM_001025192, intron 1 of 6)	intron (NM_001025192, intron 1 of 6)	1253	NM_001276263	13052	Mm.66222	NM_009988	ENSMUSG00000022865	Cxadr	2610206D03Rik|AU016810|AW553441|CAR|MCAR|MCVADR	coxsackie virus and adenovirus receptor	protein-coding	0.015000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-2202	chr5	19907328	19907528	+	2.10367	NA	promoter-TSS (NM_001170745)	promoter-TSS (NM_001170745)	-90	NM_001170745	50791	Mm.332231	NM_015823	ENSMUSG00000040003	Magi2	AIP-1|Acvri1|Acvrinp1|Acvrip1|Magi-2|S-SCAM|mKIAA0705	membrane associated guanylate kinase, WW and PDZ domain containing 2	protein-coding	0.015000	0.462687			-36(GCTTTGTAATGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2098	chr4	63668473	63668673	+	2.10367	NA	Intergenic	Intergenic	34152	NR_151544	102632940	Mm.399154	NR_151544	ENSMUSG00000086817	Gm11482	-	predicted gene 11482	ncRNA	0.015000	0.477612			
ePOU_nocontrol_ChIP_peaks_unique-402	chr10	118451150	118451350	+	2.10367	NA	Intergenic	L1MC4|LINE|L1	10204	NM_008337	15978	Mm.240327	NM_008337	ENSMUSG00000055170	Ifng	IFN-g|Ifg	interferon gamma	protein-coding	0.000000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-1566	chr19	34922028	34922228	+	2.10367	NA	promoter-TSS (NM_183046)	promoter-TSS (NM_183046)	-230	NM_183046	240641	Mm.278471	NM_183046	ENSMUSG00000024795	Kif20b	33cex|C330014J10Rik|MPP1|Mphosph1|magoo	kinesin family member 20B	protein-coding	0.080000	0.616915			
ePOU_nocontrol_ChIP_peaks_unique-217	chr1	183227834	183228034	+	2.10367	NA	Intergenic	Intergenic	-6405	NM_001278219	68897	Mm.327216	NM_026866	ENSMUSG00000030768	Disp1	1190008H24Rik|DispA	dispatched RND transporter family member 1	protein-coding	0.015000	0.447761			
ePOU_nocontrol_ChIP_peaks_unique-2241	chr5	45669660	45669860	+	2.10367	NA	promoter-TSS (NR_073433)	promoter-TSS (NR_073433)	-52	NR_073433	69788	Mm.381492	NR_073433	ENSMUSG00000104986	1600023N17Rik	AV119442	RIKEN cDNA 1600023N17 gene	ncRNA	0.075000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-2368	chr5	140514785	140514985	+	2.10367	NA	intron (NM_021528, intron 1 of 1)	intron (NM_021528, intron 1 of 1)	9276	NM_021528	59031	Mm.28934	NM_021528	ENSMUSG00000036599	Chst12	AI595374|C4S-2|C4ST2	carbohydrate sulfotransferase 12	protein-coding	0.010000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-2143	chr4	118191388	118191588	+	2.10367	NA	Intergenic	L1MB8|LINE|L1	-11445	NM_172382	230674	Mm.234234	NM_172382	ENSMUSG00000033326	Kdm4a	D4Ertd222e|JHDM3A|Jmjd2|Jmjd2a|mKIAA0677	lysine (K)-specific demethylase 4A	protein-coding	0.000000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-749	chr12	97524280	97524480	+	2.10367	NA	Intergenic	Intergenic	735079	NM_008079	14420	Mm.5120	NM_008079	ENSMUSG00000021003	Galc	2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher	galactosylceramidase	protein-coding	0.000000	0.278607			
ePOU_nocontrol_ChIP_peaks_unique-1955	chr3	95253569	95253769	+	2.10367	NA	TTS (NM_173347)	TTS (NM_173347)	-2476	NM_134253	171388	Mm.331209	NM_134253	ENSMUSG00000028115	Bnipl	1700128A13Rik|BNIP-S|BNIPL1|BNIPL2|PP73|PP753	BCL2/adenovirus E1B 19kD interacting protein like	protein-coding	0.005000	0.393035			38(AAATGCAAAACAAAGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1930	chr3	79629028	79629228	+	2.10367	NA	promoter-TSS (NM_025794)	promoter-TSS (NM_025794)	49	NM_029482	75939	Mm.221520	NM_029482	ENSMUSG00000027811	4930579G24Rik	-	RIKEN cDNA 4930579G24 gene	protein-coding	0.080000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-2855	chr9	31628116	31628316	+	2.10367	NA	Intergenic	Intergenic	-163978	NM_144936	235135	Mm.390134	NM_144936	ENSMUSG00000041737	Tmem45b	BC018222	transmembrane protein 45b	protein-coding	0.005000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-2370	chr5	142881166	142881366	+	2.10367	NA	intron (NM_001033312, intron 3 of 4)	intron (NM_001033312, intron 3 of 4)	13972	NM_001033312	231863	Mm.89753	NM_001033312	ENSMUSG00000066640	Fbxl18	AI427077|B130019G13Rik|C330021B20Rik	F-box and leucine-rich repeat protein 18	protein-coding	0.025000	0.582090			
ePOU_nocontrol_ChIP_peaks_unique-389	chr10	108621590	108621790	+	2.10367	NA	intron (NM_001252342, intron 8 of 10)	intron (NM_001252342, intron 8 of 10)	78470	NM_203660	368203	Mm.452758	NM_203660	ENSMUSG00000112039	Gm5136	C6.1AL|EG368203	predicted gene 5136	protein-coding	0.005000	0.298507			
ePOU_nocontrol_ChIP_peaks_unique-2264	chr5	67613731	67613931	+	2.10367	NA	3' UTR (NM_001033415, exon 2 of 2)	3' UTR (NM_001033415, exon 2 of 2)	5948	NM_001033415	330096	Mm.442747	NM_001033415	ENSMUSG00000050010	Shisa3	D830007B15Rik	shisa family member 3	protein-coding	0.010000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-2987	chrX	86950885	86951085	+	2.10367	NA	intron (NM_001160403, intron 6 of 10)	intron (NM_001160403, intron 6 of 10)	-595991	NR_036689	245502	Mm.490821	NR_036689		Gm41	-	melanoma antigen, family B, 4 pseudogene	pseudo	0.005000	0.373134			
Oct4_nocontrol_ChIP_peaks_unique-75	chr5	33535537	33535737	+	2.10367	NA	Intergenic	Intergenic	91874	NM_001359461	74504	Mm.294695	NM_178390	ENSMUSG00000037339	Fam53a	2410018C17Rik|5430419M09Rik|Dntnp	family with sequence similarity 53, member A	protein-coding	0.010000	0.477612			43(ATCTAAATGACAATTA,-,0.00),74(ATTAGCAAGACAATCT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-332	chr10	68112522	68112722	+	2.10367	NA	intron (NM_023598, intron 8 of 9)	intron (NM_023598, intron 8 of 9)	133052	NM_001359319	170799	Mm.209844	NM_133244	ENSMUSG00000037846	Rtkn2	B130039D23Rik|Mbf|Plekhk1	rhotekin 2	protein-coding	0.005000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-2140	chr4	115737624	115737824	+	2.10367	NA	promoter-TSS (NM_172698)	promoter-TSS (NM_172698)	-46	NM_001368627	230648	Mm.283565	NM_172698	ENSMUSG00000034210	Efcab14	4732418C07Rik	EF-hand calcium binding domain 14	protein-coding	0.085000	0.696517			
ePOU_nocontrol_ChIP_peaks_unique-2726	chr8	48554629	48554829	+	2.10367	NA	intron (NM_011857, intron 2 of 28)	intron (NM_011857, intron 2 of 28)	119961	NM_011857	23965	Mm.42191	NM_011857	ENSMUSG00000031561	Tenm3	2610100B16Rik|Odz1|Odz3|Ten-m3|mKIAA1455	teneurin transmembrane protein 3	protein-coding	0.025000	0.318408	-87(CATGAATTATTCAAA,+,0.00),-87(CATGAATTATTCAAA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-119	chr1	106400871	106401071	+	2.10367	NA	Intergenic	Intergenic	145660	NR_106164	102466254		NR_106164	ENSMUSG00000098344	Mir3473f	Gm27846|mmu-mir-3473f	microRNA 3473f	ncRNA	0.020000	0.517413			
ePOU_nocontrol_ChIP_peaks_unique-270	chr10	23170640	23170840	+	2.10367	NA	intron (NM_001347372, intron 4 of 18)	intron (NM_001347372, intron 4 of 18)	179150	NM_001347372	14051	Mm.332128	NM_010167	ENSMUSG00000010461	Eya4	B130023L16Rik	EYA transcriptional coactivator and phosphatase 4	protein-coding	0.005000	0.278607	-34(TATAAATAATGAATA,+,0.00),-34(TATAAATAATGAATA,-,0.00)		-9(TATTTGTCATGTATTT,+,0.00),71(ACGTTTTCATTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2519	chr6	126939738	126939938	+	2.10367	NA	promoter-TSS (NM_001347455)	promoter-TSS (NM_001347455)	-128	NM_138594	28040	Mm.44228	NM_138594	ENSMUSG00000030347	D6Wsu163e	C12orf4	DNA segment, Chr 6, Wayne State University 163, expressed	protein-coding	0.040000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-2720	chr8	46626440	46626640	+	2.10367	NA	intron (NM_001284409, intron 1 of 6)	intron (NM_001284409, intron 1 of 6)	9249	NM_009810	12367	Mm.34405	NM_009810	ENSMUSG00000031628	Casp3	A830040C14Rik|AC-3|CASP-3|CC3|CPP-32|CPP32|Caspase-3|Lice|SCA-1|Yama|mldy	caspase 3	protein-coding	0.005000	0.348259	-6(TATGAATAATGCATA,+,0.00),-6(TATGAATAATGCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1380	chr17	68210857	68211057	+	2.10367	NA	Intergenic	Intergenic	-62840	NM_177278	320858	Mm.137356	NM_177278	ENSMUSG00000041565	L3mbtl4	A730037L19Rik|D930040M24Rik	L3MBTL4 histone methyl-lysine binding protein	protein-coding	0.025000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-1869	chr3	34653924	34654124	+	2.10367	NA	intron (NR_015580, intron 4 of 4)	intron (NR_015580, intron 4 of 4)	4029	NM_011443	20674	Mm.65396	NM_011443	ENSMUSG00000074637	Sox2	Sox-2|lcc|ysb	SRY (sex determining region Y)-box 2	protein-coding	0.025000	0.432836			24(CCATTGTGATGCATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2668	chr7	128671944	128672144	+	2.10367	NA	intron (NM_178641, intron 9 of 19)	intron (NM_178641, intron 9 of 19)	-16826	NM_001346517	101490	Mm.490344	NM_178641	ENSMUSG00000042105	Inpp5f	5830435P03Rik|AI115354|AW561896|SAC2|cI-27|hSAC2|mKIAA0966	inositol polyphosphate-5-phosphatase F	protein-coding	0.020000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-1035	chr14	110332771	110332971	+	2.10367	NA	Intergenic	Intergenic	422278	NM_175499	239250	Mm.49728	NM_175499	ENSMUSG00000045871	Slitrk6	4832410J21Rik|Sltk6	SLIT and NTRK-like family, member 6	protein-coding	0.000000	0.303483			
ePOU_nocontrol_ChIP_peaks_unique-939	chr14	29335339	29335539	+	2.10367	NA	intron (NM_009785, intron 8 of 37)	intron (NM_009785, intron 8 of 37)	317231	NM_176920	319476	Mm.95780	NM_176920	ENSMUSG00000045776	Lrtm1	A930016D02Rik	leucine-rich repeats and transmembrane domains 1	protein-coding	0.005000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-2526	chr6	136804336	136804536	+	2.10367	NA	promoter-TSS (NM_175652)	promoter-TSS (NM_175652)	-5	NM_175652	320332	Mm.246720	NM_175652	ENSMUSG00000096010	Hist4h4	B130044J01Rik	histone cluster 4, H4	protein-coding	0.035000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-69	chr1	62011637	62011837	+	2.10367	NA	intron (NM_001081050, intron 3 of 22)	intron (NM_001081050, intron 3 of 22)	124372	NR_151537	105243940		NR_151537		Pard3bos2	Gm12747	par-3 family cell polarity regulator beta, opposite strand 2	ncRNA	0.005000	0.288557			
ePOU_nocontrol_ChIP_peaks_unique-1245	chr16	44117492	44117692	+	2.10367	NA	intron (NM_007508, intron 1 of 14)	B3|SINE|B2	21667	NM_001358204	11964	Mm.217787	NM_007508	ENSMUSG00000052459	Atp6v1a	AI647066|Atp6a1|Atp6a2|Atp6v1a1|VA68|VPP2	ATPase, H+ transporting, lysosomal V1 subunit A	protein-coding	0.010000	0.402985	-17(AATGCTTTATTCATT,+,0.00),-17(AATGCTTTATTCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2833	chr9	13913660	13913860	+	2.10367	NA	Intergenic	Intergenic	86044	NM_001358259	72826	Mm.246174	NM_176836	ENSMUSG00000037808	Fam76b	2810485I05Rik|C78303	family with sequence similarity 76, member B	protein-coding	0.010000	0.412935	-13(TTTGAATTATTCATC,+,0.00),-13(TTTGAATTATTCATC,-,0.00)	-33(GATGAATATGTAAA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2964	chr9	121718810	121719010	+	2.10367	NA	promoter-TSS (NM_010918)	promoter-TSS (NM_010918)	-271	NM_010918	18087	Mm.32842	NM_010918	ENSMUSG00000032525	Nktr	5330401F18Rik|D9Wsu172e	natural killer tumor recognition sequence	protein-coding	0.090000	0.616915			
ePOU_nocontrol_ChIP_peaks_unique-2144	chr4	118236886	118237086	+	2.10367	NA	intron (NM_011213, intron 8 of 32)	intron (NM_011213, intron 8 of 32)	-26422	NR_106085	102466820		NR_106085	ENSMUSG00000098596	Mir7226	Gm27630|mmu-mir-7226	microRNA 7226	ncRNA	0.030000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-1685	chr2	57523757	57523957	+	2.10367	NA	Intergenic	Intergenic	285475	NM_010274	14571	Mm.3711	NM_010274	ENSMUSG00000026827	Gpd2	AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38	glycerol phosphate dehydrogenase 2, mitochondrial	protein-coding	0.000000	0.328358			
ePOU_nocontrol_ChIP_peaks_unique-2787	chr8	95332038	95332238	+	2.10367	NA	promoter-TSS (NM_024467)	promoter-TSS (NM_024467)	-146	NM_133954	101985	Mm.29069	NM_133954	ENSMUSG00000031792	Usb1	AA960436	U6 snRNA biogenesis 1	protein-coding	0.070000	0.636816			
ePOU_nocontrol_ChIP_peaks_unique-2204	chr5	22518612	22518812	+	2.10367	NA	intron (NM_011959, intron 11 of 13)	RMER19B2|LTR|ERVK	10318	NR_004442	100042049	Mm.21724	NR_004442		Gm15421	-	ribosomal protein L22 like 1 pseudogene	pseudo	0.015000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-707	chr12	74601729	74601929	+	2.10367	NA	Intergenic	Intergenic	304355	NM_198866	386753	Mm.341686	NM_198866		Dbpht2	Spot2	DNA binding protein with his-thr domain	protein-coding	0.000000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-2185	chr4	152477664	152477864	+	2.10367	NA	promoter-TSS (NM_001355739)	promoter-TSS (NM_001355739)	26	NM_001355739	260305	Mm.302496	NM_153424	ENSMUSG00000039577	Nphp4	4930564O18Rik|nmf192	nephronophthisis 4 (juvenile) homolog (human)	protein-coding	0.095000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-1449	chr18	38256156	38256356	+	2.10367	NA	intron (NM_024179, intron 7 of 12)	intron (NM_024179, intron 7 of 12)	-5691	NR_027904	73516	Mm.48776	NR_015475	ENSMUSG00000097080	1700086O06Rik	-	RIKEN cDNA 1700086O06 gene	ncRNA	0.015000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-2354	chr5	135934774	135934974	+	2.10367	NA	promoter-TSS (NM_018871)	promoter-TSS (NM_018871)	-233	NM_018871	22628	Mm.233813	NM_018871	ENSMUSG00000051391	Ywhag	14-3-3gamma|D7Bwg1348e	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide	protein-coding	0.015000	0.477612			29(TTTTTTTTTTGCATAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-405	chr10	120882408	120882608	+	2.10367	NA	intron (NM_177092, intron 1 of 6)	intron (NM_177092, intron 1 of 6)	16463	NM_177092	320183	Mm.169755	NM_177092	ENSMUSG00000051236	Msrb3	D430026P16Rik|I-8-23|MsrB2	methionine sulfoxide reductase B3	protein-coding	0.035000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-2234	chr5	38260477	38260677	+	2.10367	NA	intron (NM_001356960, intron 1 of 4)	CpG	392	NM_025480	66309	Mm.256185	NM_025480	ENSMUSG00000067365	Tmem128	2810021O14Rik	transmembrane protein 128	protein-coding	0.055000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-340	chr10	75872979	75873179	+	2.10367	NA	Intergenic	RLTR12G|LTR|ERVK	-12802	NM_010798	17319	Mm.2326	NM_010798	ENSMUSG00000033307	Mif	DER6|GIF|Glif	macrophage migration inhibitory factor (glycosylation-inhibiting factor)	protein-coding	0.035000	0.532338			
ePOU_nocontrol_ChIP_peaks_unique-2775	chr8	86428703	86428903	+	2.10367	NA	Intergenic	Intergenic	137787	NM_172912	244562	Mm.67485	NM_172912	ENSMUSG00000036872	Abcc12	4930467B22Rik|MRP9	ATP-binding cassette, sub-family C (CFTR/MRP), member 12	protein-coding	0.015000	0.368159			-48(CTGTTGTTTTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-631	chr11	120769491	120769691	+	2.10367	NA	Intergenic	RLTR13B1|LTR|ERVK	14613	NM_009053	19719	Mm.871	NM_009053	ENSMUSG00000025158	Rfng	-	RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	protein-coding	0.010000	0.447761	-76(ATTGCATTATTCATG,+,0.00),-76(ATTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2091	chr4	57974286	57974486	+	2.10367	NA	Intergenic	ORR1D1|LTR|ERVL-MaLR	-17975	NM_011660	22166	Mm.260618	NM_011660	ENSMUSG00000028367	Txn1	ADF|AW550880|Trx1|Txn	thioredoxin 1	protein-coding	0.000000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-677	chr12	39354108	39354308	+	2.10367	NA	Intergenic	Intergenic	570497	NM_001163154	14009	Mm.4866	NM_007960	ENSMUSG00000004151	Etv1	ER81|Etsrp81	ets variant 1	protein-coding	0.000000	0.343284	-2(AATGCATTATTCATG,+,0.00),-2(AATGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2320	chr5	112053208	112053408	+	2.10367	NA	Intergenic	Intergenic	-153455	NR_045378	75569	Mm.243721	NR_045377	ENSMUSG00000101683	1700028D13Rik	-	RIKEN cDNA 1700028D13 gene	ncRNA	0.000000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-345	chr10	79533454	79533654	+	2.10367	NA	intron (NM_001302389, intron 1 of 5)	CpG	233	NM_015817	50784	Mm.28873	NM_015817	ENSMUSG00000052151	Plpp2	Lpp2|PAP2-G|PAP2-gamma|PAP2c|Ppap2c	phospholipid phosphatase 2	protein-coding	0.060000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-2874	chr9	52805000	52805200	+	2.10367	NA	Intergenic	Intergenic	125237	NR_045333	382139	Mm.335162	NR_045333	ENSMUSG00000111020	Gm1715	-	predicted gene 1715	ncRNA	0.005000	0.338308		46(TATGCATATATATG,-,0.00),50(CATATATATGCATT,+,0.00),56(TATGCATTTGCATA,+,0.00),56(TATGCATTTGCATA,-,0.00),62(TTTGCATATGCAAG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-448	chr11	30198102	30198302	+	2.10367	NA	promoter-TSS (NM_009260)	promoter-TSS (NM_009260)	55	NM_009260	20742	Mm.123110	NM_009260	ENSMUSG00000020315	Sptbn1	9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049	spectrin beta, non-erythrocytic 1	protein-coding	0.035000	0.527363			
ePOU_nocontrol_ChIP_peaks_unique-2102	chr4	71613980	71614180	+	2.10367	NA	Intergenic	Intergenic	586813	NM_011599	21885	Mm.278444	NM_011599	ENSMUSG00000008305	Tle1	C230057C06Rik|Estm14|Grg-1|Grg1|Tle4l	transducin-like enhancer of split 1	protein-coding	0.000000	0.353234	-48(CTTGCATATTTCATA,+,0.00)		-55(TGCTTCTCTTGCATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-717	chr12	77696299	77696499	+	2.10367	NA	Intergenic	Intergenic	286258	NM_001252616	53618	Mm.35628	NM_016893	ENSMUSG00000021065	Fut8	-	fucosyltransferase 8	protein-coding	0.025000	0.427861	-57(ACTGAATTATTCATG,+,0.00),-57(ACTGAATTATTCATG,-,0.00),-34(CATAAATAATGCATT,+,0.00),-34(CATAAATAATGCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-641	chr12	7208594	7208794	+	2.10367	NA	Intergenic	Intergenic	171636	NR_045045	73575	Mm.179463	NR_045045	ENSMUSG00000102096	1700101O22Rik	-	RIKEN cDNA 1700101O22 gene	ncRNA	0.000000	0.278607	-34(AATGCATTTTTTATT,-,0.00)		59(TCTTTCTTTTTCTTAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-506	chr11	65697122	65697322	+	2.10367	NA	intron (NM_001316367, intron 8 of 11)	intron (NM_001316367, intron 8 of 11)	37610	NR_030417	791070		NR_030417	ENSMUSG00000076460	Mir744	Mirn744|mir-744|mmu-mir-744	microRNA 744	ncRNA	0.010000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-1484	chr18	65606944	65607144	+	2.10367	NA	intron (NM_001361052, intron 1 of 8)	intron (NM_001361052, intron 1 of 8)	361	NM_001361052	328977	Mm.286232	NM_207255	ENSMUSG00000042439	Zfp532	C530030I18Rik|Znf532|mKIAA1629	zinc finger protein 532	protein-coding	0.010000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-323	chr10	59537583	59537783	+	2.10367	NA	intron (NM_001033259, intron 1 of 7)	intron (NM_001033259, intron 1 of 7)	79009	NM_001033259	215999	Mm.296470	NM_001033259	ENSMUSG00000009647	Mcu	2010012O16Rik|AV064928|C10orf42|Ccdc109a|D130073L02Rik|Gm64	mitochondrial calcium uniporter	protein-coding	0.020000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-2603	chr7	72675083	72675283	+	2.10367	NA	Intergenic	Intergenic	-368588	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding	0.015000	0.388060	-42(AATGCATTATGCAGA,+,0.00),-42(AATGCATTATGCAGA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-171	chr1	157328687	157328887	+	2.10367	NA	intron (NM_177644, intron 1 of 17)	ID4_|SINE|ID	-83565	NR_027984	69953	Mm.286863	NM_027274	ENSMUSG00000049881	2810025M15Rik	AI429618	RIKEN cDNA 2810025M15 gene	ncRNA	0.000000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-1055	chr15	6670331	6670531	+	2.10367	NA	Intergenic	Intergenic	-16128	NR_155272	102632231	Mm.444780	NR_155272		LOC102632231	-	uncharacterized LOC102632231	ncRNA	0.020000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-875	chr13	92698965	92699165	+	2.10367	NA	intron (NM_172588, intron 8 of 11)	intron (NM_172588, intron 8 of 11)	87927	NM_172588	218442	Mm.297970	NM_172588	ENSMUSG00000021703	Serinc5	A130038L21Rik|AIGP3|C86123|TPO1	serine incorporator 5	protein-coding	0.025000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-2631	chr7	98703002	98703202	+	2.10367	NA	promoter-TSS (NM_028410)	promoter-TSS (NM_028410)	-145	NM_001355114	72981	Mm.4428	NM_028410	ENSMUSG00000030753	Thap12	2900052B10Rik|Dap4|Prkrir|Rpkrir	THAP domain containing 12	protein-coding	0.115000	0.726368			
ePOU_nocontrol_ChIP_peaks_unique-2303	chr5	103753927	103754127	+	2.10367	NA	promoter-TSS (NM_001080798)	promoter-TSS (NM_001080798)	-135	NM_133919	17355	Mm.6949	NM_133919	ENSMUSG00000029313	Aff1	9630032B01Rik|AW319193|Af4|Mllt2h|Rob	AF4/FMR2 family, member 1	protein-coding	0.130000	0.781095			
ePOU_nocontrol_ChIP_peaks_unique-799	chr13	21259599	21259799	+	2.10367	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	32987	NM_010343	14780	Mm.1332	NM_010343	ENSMUSG00000004344	Gpx5	AV379049|Arep	glutathione peroxidase 5	protein-coding	0.015000	0.333333			-32(TTTTTTTTTTTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2644	chr7	110844383	110844583	+	2.10367	NA	promoter-TSS (NM_025999)	promoter-TSS (NM_025999)	-102	NM_025999	67150	Mm.96867	NM_025999	ENSMUSG00000030788	Rnf141	2610110L04Rik|AA792898|AU022812|ZFP36|ZNF230	ring finger protein 141	protein-coding	0.065000	0.572139			
ePOU_nocontrol_ChIP_peaks_unique-1161	chr15	98181290	98181490	+	2.10367	NA	Intergenic	Intergenic	13584	NM_177716	239650	Mm.54140	NM_177716	ENSMUSG00000029875	Ccdc184	5630400A08|AI836003	coiled-coil domain containing 184	protein-coding	0.055000	0.631841			
merged_common-142	chr2	76805330	76805530	+	2.10367	NA	intron (NM_028004, intron 68 of 191)	intron (NM_028004, intron 68 of 191)	130115	NM_031256	83435	Mm.41636	NM_031256	ENSMUSG00000002733	Plekha3	FAPP1	pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3	protein-coding	0.005000	0.358209			26(TTTTGCATTAGAATGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-745	chr12	94546482	94546682	+	2.10367	NA	Intergenic	Intergenic	619244	NR_106201	102466888		NR_106201	ENSMUSG00000098931	Mir8099-2	Gm27692|mmu-mir-8099-2	microRNA 8099-2	ncRNA	0.005000	0.333333			15(CTTTACATATCAAAGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2473	chr6	86365208	86365408	+	2.10367	NA	promoter-TSS (NM_001368363)	promoter-TSS (NM_001368363)	-163	NM_001368363	66488	Mm.422972	NM_025591	ENSMUSG00000057497	Fam136a	2010309E21Rik|AW124904|Hyccin	family with sequence similarity 136, member A	protein-coding	0.030000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-2072	chr4	40853857	40854057	+	2.10367	NA	5' UTR (NM_022305, exon 1 of 6)	5' UTR (NM_022305, exon 1 of 6)	580	NM_022305	14595	Mm.15622	NM_022305	ENSMUSG00000028413	B4galt1	B-1,4-GalT|B-1,4-GalT1|GalT|Ggtb|Ggtb2|b4Gal-T1|beta-1,4-GalT|beta-1,4-GalT1|beta4Gal-T1	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1	protein-coding	0.110000	0.731343			
ePOU_nocontrol_ChIP_peaks_unique-1639	chr2	22895398	22895598	+	2.10367	NA	promoter-TSS (NM_019501)	promoter-TSS (NM_019501)	-24	NM_001355467	56075	Mm.249752	NM_019501	ENSMUSG00000026784	Pdss1	2610203G20Rik|2700031G06Rik|TPT|TPT 1|Tprt|mDLP1|mSPS1	prenyl (solanesyl) diphosphate synthase, subunit 1	protein-coding	0.095000	0.636816			
ePOU_nocontrol_ChIP_peaks_unique-1057	chr15	6902119	6902319	+	2.10367	NA	Intergenic	L1MC|LINE|L1	-27906	NM_001310469	18414	Mm.10760	NM_011019	ENSMUSG00000022146	Osmr	OSMRB	oncostatin M receptor	protein-coding	0.010000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-93	chr1	81913456	81913656	+	2.10367	NA	Intergenic	Intergenic	-218360	NR_105762	102466629		NR_105762	ENSMUSG00000098797	Mir6344	Gm27840|mmu-mir-6344	microRNA 6344	ncRNA	0.005000	0.328358			
ePOU_nocontrol_ChIP_peaks_unique-1771	chr2	129167091	129167291	+	2.10367	NA	Intergenic	Intergenic	13482	NR_045264	100048701	Mm.428544	NR_045264	ENSMUSG00000084826	AI847159	-	expressed sequence AI847159	ncRNA	0.015000	0.442786			10(ATTTGCAAGTTAAAGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2235	chr5	39856753	39856953	+	2.10367	NA	Intergenic	Intergenic	-212222	NM_010474	15476	Mm.12559	NM_010474	ENSMUSG00000051022	Hs3st1	3-Ost|D5Wsu110e|Hsg3ost	heparan sulfate (glucosamine) 3-O-sulfotransferase 1	protein-coding	0.000000	0.358209	-26(AATGAATTATACATT,+,0.00),-26(AATGAATTATACATT,-,0.00)		-83(CTATTTGCATTTAAAT,+,0.00),4(GCTGTTTTATGGAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1420	chr18	7583955	7584155	+	2.10367	NA	intron (NM_001360860, intron 1 of 17)	LTRIS2|LTR|ERV1	24099	NM_001360860	75739	Mm.133293	NM_001081287	ENSMUSG00000057440	Mpp7	1110068J02Rik|2810038M04Rik|5430426E14Rik|AI415104|Gm955	membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	protein-coding	0.005000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-2023	chr3	146758338	146758538	+	2.10367	NA	intron (NM_011100, intron 1 of 9)	intron (NM_011100, intron 1 of 9)	11800	NM_001164198	18749	Mm.16766	NM_011100	ENSMUSG00000005034	Prkacb	CbPKA|Pkacb	protein kinase, cAMP dependent, catalytic, beta	protein-coding	0.000000	0.293532			
ePOU_nocontrol_ChIP_peaks_unique-1206	chr16	25923849	25924049	+	2.10367	NA	Intergenic	ORR1A3-int|LTR|ERVL-MaLR	122033	NM_001127262	22061	Mm.20894	NM_011641	ENSMUSG00000022510	Trp63	AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1	transformation related protein 63	protein-coding	0.000000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-43	chr1	39761739	39761939	+	2.10367	NA	Intergenic	Intergenic	-40850	NM_001145660	619289	Mm.334107	NM_001145660	ENSMUSG00000057173	Rfx8	4933400N17Rik	regulatory factor X 8	protein-coding	0.025000	0.457711			
merged_common-70	chr13	13954454	13954654	+	2.10367	NA	promoter-TSS (NR_155555)	promoter-TSS (NR_155555)	-120	NM_001362404	97884	Mm.21686	NM_178640	ENSMUSG00000039242	B3galnt2	A930105D20Rik|C80633|D230016N13Rik	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	protein-coding	0.100000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-882	chr13	95776633	95776833	+	2.10367	NA	intron (NM_027711, intron 2 of 35)	MER2|DNA|TcMar-Tigger	79813	NM_010170	14064	Mm.440952	NM_010170	ENSMUSG00000021675	F2rl2	F730031A08|PAR3	coagulation factor II (thrombin) receptor-like 2	protein-coding	0.000000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-358	chr10	83271980	83272180	+	2.10367	NA	intron (NM_177388, intron 8 of 10)	Lx7|LINE|L1	65737	NM_177388	338365	Mm.67073	NM_177388	ENSMUSG00000034591	Slc41a2	A230035L05Rik|SLC41A1-L1	solute carrier family 41, member 2	protein-coding	0.005000	0.283582			-33(ATTTGCAAACCAAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2071	chr4	40722461	40722661	+	2.10367	NA	promoter-TSS (NM_008298)	promoter-TSS (NM_008298)	93	NM_008298	15502	Mm.27897	NM_008298	ENSMUSG00000028410	Dnaja1	HSJ-2|Hsj2|Nedd7	DnaJ heat shock protein family (Hsp40) member A1	protein-coding	0.130000	0.721393			
ePOU_nocontrol_ChIP_peaks_unique-55	chr1	53352591	53352791	+	2.10367	NA	promoter-TSS (NM_133728)	promoter-TSS (NM_133728)	61	NM_001290984	70396	Mm.285783	NM_133728	ENSMUSG00000026095	Asnsd1	2210409M21Rik	asparagine synthetase domain containing 1	protein-coding	0.105000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-2788	chr8	102627309	102627509	+	2.10367	NA	Intergenic	Intergenic	157702	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11|OSF-4	cadherin 11	protein-coding	0.005000	0.388060			75(TACTTTTCATTCAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1178	chr16	4559625	4559825	+	2.10367	NA	promoter-TSS (NM_031182)	promoter-TSS (NM_031182)	-5	NM_031182	83383	Mm.273210	NM_031182	ENSMUSG00000005718	Tfap4	AI642933|AP-4|D930048N17Rik|Tcfap4|bHLHc41	transcription factor AP4	protein-coding	0.055000	0.636816			
ePOU_nocontrol_ChIP_peaks_unique-447	chr11	28812945	28813145	+	2.10367	NA	Intergenic	Intergenic	-40160	NM_146015	216616	Mm.44176	NM_146015	ENSMUSG00000020467	Efemp1	-	epidermal growth factor-containing fibulin-like extracellular matrix protein 1	protein-coding	0.005000	0.442786			43(TCATTTTCTTGTAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2482	chr6	95270438	95270638	+	2.10367	NA	Intergenic	Intergenic	63455	NR_033559	414067	Mm.355990	NR_033559	ENSMUSG00000068180	AY512915	-	cDNA sequence AY512915	ncRNA	0.005000	0.288557			
ePOU_nocontrol_ChIP_peaks_unique-269	chr10	21533828	21534028	+	2.10367	NA	Intergenic	Intergenic	-59217	NR_027968	67692	Mm.54306	NM_183266	ENSMUSG00000050844	1700020N01Rik	-	RIKEN cDNA 1700020N01 gene	ncRNA	0.000000	0.278607			-59(TCATTCCTTTACAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1895	chr3	55148793	55148993	+	2.10367	NA	intron (NR_110780, intron 1 of 7)	RMER5|LTR|ERV1	6652	NR_110780	320604	Mm.213909	NM_177203	ENSMUSG00000048655	Ccdc169	A730037C10Rik	coiled-coil domain containing 169	protein-coding	0.020000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-2857	chr9	32095639	32095839	+	2.10367	NA	intron (NM_001370958, intron 1 of 22)	intron (NM_001370958, intron 1 of 22)	-20249	NM_001195632	330914	Mm.46683	NM_177379	ENSMUSG00000041444	Arhgap32	3426406O18Rik|Gc-gap|Grit|Px-rics|Rics|mKIAA0712|p200Rhogap|p250Gap	Rho GTPase activating protein 32	protein-coding	0.010000	0.417910			19(TGTTTGTCATGCAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2589	chr7	50253095	50253295	+	2.10367	NA	intron (NM_001037906, intron 10 of 19)	Lx8|LINE|L1	277845	NM_001037906	338352	Mm.383528	NM_001037906	ENSMUSG00000055409	Nell1	B230343H07Rik|l7R6	NEL-like 1	protein-coding	0.000000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-2619	chr7	89679399	89679599	+	2.10367	NA	intron (NM_181407, intron 1 of 13)	intron (NM_181407, intron 1 of 13)	46681	NM_181407	109264	Mm.334011	NM_181407	ENSMUSG00000030621	Me3	1700020C08Rik|B230207H15Rik	malic enzyme 3, NADP(+)-dependent, mitochondrial	protein-coding	0.020000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-2342	chr5	129941755	129941955	+	2.10367	NA	promoter-TSS (NM_027121)	promoter-TSS (NM_027121)	-254	NM_027121	69568	Mm.288718	NM_027121	ENSMUSG00000066735	Vkorc1l1	2310024K08Rik	vitamin K epoxide reductase complex, subunit 1-like 1	protein-coding	0.110000	0.711443			
ePOU_nocontrol_ChIP_peaks_unique-2477	chr6	88337219	88337419	+	2.10367	NA	intron (NR_149744, intron 3 of 5)	intron (NR_149744, intron 3 of 5)	109220	NR_149744	65967	Mm.333237	NM_023060	ENSMUSG00000033216	Eefsec	Selb|mSelB|sec	eukaryotic elongation factor, selenocysteine-tRNA-specific	protein-coding	0.010000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-1836	chr2	172609362	172609562	+	2.10367	NA	Intergenic	Intergenic	58471	NM_001159696	21420	Mm.3629	NM_009335	ENSMUSG00000028640	Tfap2c	AA409384|AP2gamma|Ap-2.2|Stra2|Tcfap2c	transcription factor AP-2, gamma	protein-coding	0.005000	0.293532	-10(AATGAATAATTCATA,+,0.00),-10(AATGAATAATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2122	chr4	95500950	95501150	+	2.10367	NA	Intergenic	Intergenic	-56457	NM_001113412	75578	Mm.276098	NM_029347	ENSMUSG00000028573	Fggy	2310009E04Rik	FGGY carbohydrate kinase domain containing	protein-coding	0.000000	0.348259			-80(ATTAACAAAGCAAAGA,-,0.00),-2(GATTTGAAATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1917	chr3	67429664	67429864	+	2.10367	NA	promoter-TSS (NM_138591)	promoter-TSS (NM_138591)	-351	NM_138591	28030	Mm.122466	NM_138591	ENSMUSG00000027774	Gfm1	AW545374|D3Wsu133e|Gfm	G elongation factor, mitochondrial 1	protein-coding	0.010000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-445	chr11	25951698	25951898	+	2.10367	NA	intron (NR_027973, intron 2 of 5)	intron (NR_027973, intron 2 of 5)	-250442	NR_105791	102466154		NR_105791	ENSMUSG00000099015	Mir6372	Gm27358|mmu-mir-6372	microRNA 6372	ncRNA	0.000000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-280	chr10	26854887	26855087	+	2.10367	NA	intron (NM_176837, intron 4 of 14)	intron (NM_176837, intron 4 of 14)	82475	NM_176837	73910	Mm.356496	NM_176837	ENSMUSG00000039031	Arhgap18	4833419J07Rik|AI314906|AI843501	Rho GTPase activating protein 18	protein-coding	0.010000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-931	chr14	20661114	20661314	+	2.10367	NA	exon (NM_001310432, exon 2 of 2)	exon (NM_001310432, exon 2 of 2)	3360	NM_001310432	68760	Mm.35789	NM_175132	ENSMUSG00000039376	Synpo2l	1110054M18Rik|Chap	synaptopodin 2-like	protein-coding	0.060000	0.582090			
ePOU_nocontrol_ChIP_peaks_unique-1062	chr15	10463443	10463643	+	2.10367	NA	intron (NM_030046, intron 2 of 11)	intron (NM_030046, intron 2 of 11)	6973	NM_030046	78244	Mm.297862	NM_030046	ENSMUSG00000044224	Dnajc21	4930461P20Rik|9930116P15Rik	DnaJ heat shock protein family (Hsp40) member C21	protein-coding	0.010000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-2512	chr6	119826297	119826497	+	2.10367	NA	intron (NR_104484, intron 1 of 20)	B3A|SINE|B2	21753	NR_104484	111173	Mm.288860	NM_053204	ENSMUSG00000030172	Erc1	4930404L01Rik|5033405M01Rik|9630025C19Rik|B430107L16Rik|CAST2|ELKS|Elks1|RAB6IP2A|RAB6IP2B|Rab6ip2|mKIAA1081	ELKS/RAB6-interacting/CAST family member 1	protein-coding	0.010000	0.378109			5(ATTAGAATAATAAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-980	chr14	60957902	60958102	+	2.10367	NA	Intergenic	Intergenic	79985	NM_001164155	29820	Mm.281356	NM_013869	ENSMUSG00000060548	Tnfrsf19	AL023044|AW123854|TAJ|TAJ-ALPHA|TRADE|Troy	tumor necrosis factor receptor superfamily, member 19	protein-coding	0.000000	0.373134			-91(GCTTTGTAATGTTTAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-138	chr1	131827839	131828039	+	2.10367	NA	promoter-TSS (NM_173865)	promoter-TSS (NM_173865)	-73	NM_173865	98396	Mm.389181	NM_173865	ENSMUSG00000013275	Slc41a1	AI573938|B230315F01Rik	solute carrier family 41, member 1	protein-coding	0.050000	0.626866			
ePOU_nocontrol_ChIP_peaks_unique-1800	chr2	142797327	142797527	+	2.10367	NA	intron (NM_001355123, intron 12 of 26)	intron (NM_001355123, intron 12 of 26)	104037	NM_001355123	16558	Mm.251934	NM_001081133	ENSMUSG00000038844	Kif16b	8430434E15Rik|AA623607|AI789011|C80253|C80902|mKIAA1590	kinesin family member 16B	protein-coding	0.015000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-537	chr11	80383013	80383213	+	2.10367	NA	promoter-TSS (NM_001130171)	promoter-TSS (NM_001130171)	-166	NR_156122	22680	Mm.401332	NM_011751	ENSMUSG00000017421	Zfp207	8430401D15Rik|BuGZ|Zep|Znf207	zinc finger protein 207	protein-coding	0.030000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-632	chr11	121204374	121204574	+	2.10367	NA	promoter-TSS (NM_001001333)	promoter-TSS (NM_001001333)	41	NM_001001333	238023	Mm.275130	NM_001001333	ENSMUSG00000039307	Hexdc	BC069960|Hexd	hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing	protein-coding	0.110000	0.721393			
ePOU_nocontrol_ChIP_peaks_unique-2541	chr6	144749100	144749300	+	2.10367	NA	Intergenic	Intergenic	76332	NR_040519	66760	Mm.233631	NR_040519	ENSMUSG00000085785	Sox5os3	4933425H06Rik	SRY (sex determining region Y)-box 5, opposite strand 3	ncRNA	0.025000	0.487562	-15(CATGTATTATGAATT,+,0.00),-8(TATGAATTATGCATA,+,0.00),-8(TATGAATTATGCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2323	chr5	114444082	114444282	+	2.10367	NA	promoter-TSS (NM_029956)	promoter-TSS (NM_029956)	-87	NM_001306205	17855	Mm.28088	NM_023556	ENSMUSG00000041939	Mvk	2310010A05Rik|AI256848|AI414037|MK	mevalonate kinase	protein-coding	0.030000	0.532338			
ePOU_nocontrol_ChIP_peaks_unique-2809	chr8	118535238	118535438	+	2.10367	NA	intron (NM_019707, intron 2 of 13)	intron (NM_019707, intron 2 of 13)	251727	NM_019707	12554	Mm.334841	NM_019707	ENSMUSG00000031841	Cdh13	4932416G01Rik|Cdht|Tcad	cadherin 13	protein-coding	0.000000	0.333333			77(ACATTGTGATGGACAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2654	chr7	114968710	114968910	+	2.10367	NA	intron (NR_040317, intron 2 of 3)	LTR37A|LTR|ERV1	17536	NR_040319	101786	Mm.395157	NR_040317	ENSMUSG00000108379	A730082K24Rik	AU044236	RIKEN cDNA A730082K24 gene	ncRNA	0.005000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-1774	chr2	130509451	130509651	+	2.10367	NA	intron (NM_008980, intron 3 of 21)	intron (NM_008980, intron 3 of 21)	54198	NR_040348	321014	Mm.442588	NR_040348	ENSMUSG00000060029	4930473A02Rik	-	RIKEN cDNA 4930473A02 gene	ncRNA	0.000000	0.328358			13(TTTTGCATATCAAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-38	chr1	35243231	35243431	+	2.10367	NA	Intergenic	Intergenic	393342	NM_001357425	226971	Mm.292751	NM_145516	ENSMUSG00000026123	Plekhb2	2310009M15Rik|AU018239|Evt2|Phdc|evt-2	pleckstrin homology domain containing, family B (evectins) member 2	protein-coding	0.025000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-1115	chr15	59239766	59239966	+	2.10367	NA	Intergenic	Zaphod|DNA|hAT-Tip100	-67082	NR_045613	100416830	Mm.490788	NR_045613	ENSMUSG00000098528	Zfp572	4930472F24Rik	zinc finger protein 572	pseudo	0.010000	0.323383	-80(CATGCATAATTCATG,+,0.00),-80(CATGCATAATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2188	chr4	156109799	156109999	+	2.10367	NA	promoter-TSS (NM_177205)	promoter-TSS (NM_177205)	-99	NM_145557	230996	Mm.318925	NM_145557	ENSMUSG00000059939	9430015G10Rik	-	RIKEN cDNA 9430015G10 gene	protein-coding	0.095000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-652	chr12	25181391	25181591	+	2.10367	NA	Intergenic	Charlie1a|DNA|hAT-Charlie	52317	NR_045844	432641	Mm.112955	NR_045844		Gm17746	-	predicted gene, 17746	ncRNA	0.015000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-2846	chr9	22408159	22408359	+	2.10367	NA	Intergenic	MusHAL1|LINE|L1	-3252	NR_152381	68283	Mm.280669	NM_026739	ENSMUSG00000036411	9530077C05Rik	1110003N12Rik|mKIAA0895	RIKEN cDNA 9530077C05 gene	protein-coding	0.010000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-724	chr12	79482661	79482861	+	2.10367	NA	intron (NM_009014, intron 7 of 10)	MARNA|DNA|TcMar-Mariner	185410	NM_001252562	19363	Mm.341756	NM_009014	ENSMUSG00000059060	Rad51b	AI553500|R51H2|Rad51l1|mREC2	RAD51 paralog B	protein-coding	0.000000	0.293532			
ePOU_nocontrol_ChIP_peaks_unique-1525	chr19	6210857	6211057	+	2.10367	NA	intron (NM_001165919, intron 3 of 10)	intron (NM_001165919, intron 3 of 10)	-15444	NM_130453	170458	Mm.379306	NM_130453	ENSMUSG00000024784	Gpha2	GPA2|zsig51	glycoprotein hormone alpha 2	protein-coding	0.000000	0.383085		70(TATACATATGGATA,+,0.00),70(TATACATATGGATA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1060	chr15	9585484	9585684	+	2.10367	NA	intron (NM_001305042, intron 34 of 36)	intron (NM_001305042, intron 34 of 36)	-55708	NM_008372	16197	Mm.389	NM_008372	ENSMUSG00000003882	Il7r	CD127|IL-7Ralpha	interleukin 7 receptor	protein-coding	0.000000	0.338308	11(CATGCATAATGGAAT,+,0.00),11(CATGCATAATGGAAT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2900	chr9	66989248	66989448	+	2.10367	NA	Intergenic	Intergenic	-13864	NM_030717	80907	Mm.157882	NM_030717	ENSMUSG00000032370	Lactb	LACT-1|Lact1|Mrpl56	lactamase, beta	protein-coding	0.020000	0.517413			
ePOU_nocontrol_ChIP_peaks_unique-2097	chr4	62966849	62967049	+	2.10367	NA	intron (NM_001369119, intron 1 of 13)	(TG)n|Simple_repeat|Simple_repeat	1382	NM_028326	72701	Mm.26479	NM_028326	ENSMUSG00000028358	Zfp618	2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1	zinc finger protein 618	protein-coding	0.005000	0.353234			-92(ATTTTAAAGAAAAACA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-176	chr1	162084149	162084349	+	2.10367	NA	intron (NM_001038619, intron 15 of 20)	intron (NM_001038619, intron 15 of 20)	79280	NR_040562	72753	Mm.452125	NR_040562	ENSMUSG00000090260	2810442N19Rik	-	RIKEN cDNA 2810442N19 gene	ncRNA	0.015000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-1488	chr18	68955806	68956006	+	2.10367	NA	Intergenic	Intergenic	-4378	NR_038051	78931	Mm.160155	NR_038051	ENSMUSG00000024546	4930546C10Rik	-	RIKEN cDNA 4930546C10 gene	ncRNA	0.010000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-2338	chr5	124269697	124269897	+	2.10367	NA	intron (NR_102690, intron 15 of 22)	intron (NR_102690, intron 15 of 22)	-20037	NM_011256	19679	Mm.44261	NM_011256	ENSMUSG00000029406	Pitpnm2	NIR3|RDGBA2|Rdgb2|mKIAA1457	phosphatidylinositol transfer protein, membrane-associated 2	protein-coding	0.035000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-2405	chr6	29031349	29031549	+	2.10367	NA	Intergenic	Intergenic	8830	NR_029567	387237		NR_029567	ENSMUSG00000065469	Mir129-1	Mirn129-1|Mirn129b|miR-129b|mir-129-1	microRNA 129-1	ncRNA	0.025000	0.597015			-100(CTTTGCATGCCAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1645	chr2	25460983	25461183	+	2.10367	NA	promoter-TSS (NM_153557)	promoter-TSS (NM_153557)	11	NM_153557	227622	Mm.261780	NM_153557	ENSMUSG00000047617	Paxx	D930050G13Rik	non-homologous end joining factor	protein-coding	0.085000	0.592040			
ePOU_nocontrol_ChIP_peaks_unique-2830	chr9	13527958	13528158	+	2.10367	NA	Intergenic	Intergenic	-91931	NM_001013813	270118	Mm.116898	NM_173776	ENSMUSG00000031925	Maml2	5930431H10|BC032967	mastermind like transcriptional coactivator 2	protein-coding	0.000000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-2518	chr6	126889380	126889580	+	2.10367	NA	intron (NM_207210, intron 9 of 14)	intron (NM_207210, intron 9 of 14)	32359	NM_207210	101320	Mm.44896	NM_207210	ENSMUSG00000030345	Dyrk4	AW049118|Dyrk4a|Dyrk4b	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4	protein-coding	0.010000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-287	chr10	31619343	31619543	+	2.10367	NA	Intergenic	Intergenic	-9718	NM_001146349	268291	Mm.295212	NM_001146349	ENSMUSG00000063760	Rnf217	AU016819|Ibrdc1	ring finger protein 217	protein-coding	0.010000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-2927	chr9	93244632	93244832	+	2.10367	NA	Intergenic	RLTR20C1_MM|LTR|ERVK	-238999	NR_040756	78349	Mm.52612	NR_040756	ENSMUSG00000100294	1700034K08Rik	-	RIKEN cDNA 1700034K08 gene	ncRNA	0.000000	0.288557	-65(TATGCATTATTCATA,+,0.00),-65(TATGCATTATTCATA,-,0.00),45(CATGCATTATTCATA,+,0.00),45(CATGCATTATTCATA,-,0.00)	-71(TATATATATGCATT,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2837	chr9	17139855	17140055	+	2.10367	NA	Intergenic	Intergenic	-637901	NM_001080814	270120	Mm.195010	NM_001080814	ENSMUSG00000074505	Fat3	9430076A06Rik|D430038H04Rik|Gm1132|Gm510|MFAT3F	FAT atypical cadherin 3	protein-coding	0.010000	0.308458			
ePOU_nocontrol_ChIP_peaks_unique-1789	chr2	135223186	135223386	+	2.10367	NA	intron (NM_001145830, intron 4 of 31)	intron (NM_001145830, intron 4 of 31)	-7670	NR_040517	78805	Mm.78702	NR_040517	ENSMUSG00000085247	4930545L23Rik	-	RIKEN cDNA 4930545L23 gene	ncRNA	0.005000	0.402985			
Oct4_nocontrol_ChIP_peaks_unique-49	chr17	68227747	68227947	+	2.10367	NA	Intergenic	RLTR22_Mur|LTR|ERVK	-45950	NM_177278	320858	Mm.137356	NM_177278	ENSMUSG00000041565	L3mbtl4	A730037L19Rik|D930040M24Rik	L3MBTL4 histone methyl-lysine binding protein	protein-coding	0.005000	0.338308		-45(TATGCAAATGTATA,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1222	chr16	33178370	33178570	+	2.10367	NA	Intergenic	Intergenic	-6601	NM_176840	106326	Mm.486405	NM_176840	ENSMUSG00000022807	Osbpl11	9430097N02Rik|AI132306|AU019795|ORP-11	oxysterol binding protein-like 11	protein-coding	0.005000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-2417	chr6	38551983	38552183	+	2.10367	NA	intron (NM_001170849, intron 1 of 7)	CpG	749	NM_001170849	192196	Mm.276133	NM_138680	ENSMUSG00000029823	Luc7l2	4930471C18Rik|AA522013|AU015269|CGI59|Cgi74	LUC7-like 2 (S. cerevisiae)	protein-coding	0.090000	0.661692			
ePOU_nocontrol_ChIP_peaks_unique-1626	chr2	14073846	14074046	+	2.10367	NA	promoter-TSS (NR_038162)	promoter-TSS (NR_038162)	-12	NR_038162	70957	Mm.399049	NR_038162	ENSMUSG00000086657	Stamos	4921530L18Rik	signal transducing adaptor molecule (SH3 domain and ITAM motif) 1, opposite strand	ncRNA	0.110000	0.681592			
ePOU_nocontrol_ChIP_peaks_unique-2128	chr4	100160290	100160490	+	2.09894	NA	intron (NM_001312690, intron 1 of 3)	MIR3|SINE|MIR	64599	NM_013845	26563	Mm.57252	NM_013845	ENSMUSG00000035305	Ror1	2810404D04Rik|Ntrkr1	receptor tyrosine kinase-like orphan receptor 1	protein-coding	0.000000	0.407960	12(AATCCATAATTCATG,+,0.00),12(AATCCATAATTCATG,-,0.00)		
merged_common-220	chr7	115582350	115582550	+	1.99918	NA	intron (NM_001025559, intron 8 of 15)	intron (NM_001025559, intron 8 of 15)	219159	NM_001277328	20679	Mm.323365	NM_011445	ENSMUSG00000051910	Sox6	AI987981|SOX-LZ	SRY (sex determining region Y)-box 6	protein-coding	0.000000	0.353234	-20(CATGCATTATTCATG,+,0.00),-20(CATGCATTATTCATG,-,0.00)		
merged_common-198	chr5	111762021	111762221	+	1.99441	NA	promoter-TSS (NR_045834)	promoter-TSS (NR_045834)	-393	NR_045832	269683	Mm.136946	NM_207252	ENSMUSG00000085271	E130006D01Rik	Gm16018|Gm681	RIKEN cDNA E130006D01 gene	ncRNA	0.055000	0.522388	45(GCTGAATAATGCATG,+,0.00),45(GCTGAATAATGCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2358	chr5	137786751	137786951	+	1.98088	NA	promoter-TSS (NM_001360023)	promoter-TSS (NM_001360023)	-150	NM_144913	231803	Mm.61193	NM_144913	ENSMUSG00000029726	Mepce	Bcdin3|D5Wsu46e	methylphosphate capping enzyme	protein-coding	0.090000	0.587065	77(CATGAATTATTCATG,+,0.00),77(CATGAATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1533	chr19	10450089	10450289	+	1.96976	NA	3' UTR (NM_173068, exon 11 of 11)	3' UTR (NM_173068, exon 11 of 11)	7258	NM_001111140	278795	Mm.490638	NM_001111140	ENSMUSG00000090291	Lrrc10b	Gm705|SerdinR	leucine rich repeat containing 10B	protein-coding	0.005000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-105	chr1	91250063	91250263	+	1.96976	NA	promoter-TSS (NM_001355761)	promoter-TSS (NM_001355761)	-141	NM_001355763	67921	Mm.337238	NM_026454	ENSMUSG00000034343	Ube2f	2510010F15Rik|AI851109	ubiquitin-conjugating enzyme E2F (putative)	protein-coding	0.055000	0.542289			
ePOU_nocontrol_ChIP_peaks_unique-2226	chr5	33378396	33378596	+	1.96976	NA	promoter-TSS (NM_027674)	promoter-TSS (NM_027674)	-200	NM_001081101	71101	Mm.132178	NM_027674	ENSMUSG00000037355	Uvssa	4933407H18Rik|D330017J19Rik|Kiaa1530|mKIAA1530	UV stimulated scaffold protein A	protein-coding	0.095000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-1905	chr3	60810613	60810813	+	1.96976	NA	Intergenic	Intergenic	-192072	NM_001282016	18441	Mm.281452	NM_008772	ENSMUSG00000027765	P2ry1	P2Y1	purinergic receptor P2Y, G-protein coupled 1	protein-coding	0.000000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-1120	chr15	65749607	65749807	+	1.96976	NA	Intergenic	MER67C|LTR|ERV1	-37313	NM_133766	76740	Mm.260647	NM_133766	ENSMUSG00000015002	Efr3a	A130089M23Rik|BB071175|C76891|C920006C10Rik|D030063F01Rik|mKIAA0143	EFR3 homolog A	protein-coding	0.005000	0.393035			5(TCTTTGAAATGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2790	chr8	103464834	103465034	+	1.96976	NA	Intergenic	Intergenic	-117400	NR_036588	69794	Mm.396139	NR_036588	ENSMUSG00000110340	1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA	0.005000	0.437811	0(GATGCATAATGCATA,+,0.00),0(GATGCATAATGCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-206	chr1	179177194	179177394	+	1.96976	NA	intron (NM_027188, intron 5 of 11)	intron (NM_027188, intron 5 of 11)	340747	NM_027188	69726	Mm.222338	NM_027188	ENSMUSG00000055067	Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding	0.005000	0.343284	-6(GATGAATAATGTATC,+,0.00),-6(GATGAATAATGTATC,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-626	chr11	119709364	119709564	+	1.96976	NA	intron (NM_001306081, intron 3 of 32)	intron (NM_001306081, intron 3 of 32)	106559	NM_028898	74370	Mm.209933	NM_028898	ENSMUSG00000025583	Rptor	4932417H02Rik|Rap|Raptor|mKIAA1303	regulatory associated protein of MTOR, complex 1	protein-coding	0.010000	0.437811	39(GTTGAATAATGCATG,+,0.00),39(GTTGAATAATGCATG,-,0.00)		
merged_common-130	chr19	46170096	46170296	+	1.96976	NA	intron (NM_178930, intron 2 of 39)	RCHARR1|DNA|hAT-Charlie	17638	NM_178930	107338	Mm.271620	NM_178930	ENSMUSG00000025224	Gbf1	1700083E03Rik|AI035702|AW049900|mKIAA0248	golgi-specific brefeldin A-resistance factor 1	protein-coding	0.000000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-784	chr13	10031442	10031642	+	1.96976	NA	intron (NM_033269, intron 3 of 4)	intron (NM_033269, intron 3 of 4)	-266221	NM_001199141	66505	Mm.397307	NM_144516	ENSMUSG00000021156	Zmynd11	2210402G22Rik|BS69	zinc finger, MYND domain containing 11	protein-coding	0.010000	0.368159			-18(GATTTGCATTGCAAAT,+,0.00),-17(ATTTGCATTGCAAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2531	chr6	138138006	138138206	+	1.96976	NA	Intergenic	L1ME1|LINE|L1	-2421	NR_154597	56615	Mm.14796	NM_019946	ENSMUSG00000008540	Mgst1	1500002K10Rik|Gst	microsomal glutathione S-transferase 1	protein-coding	0.000000	0.333333			-92(TTTAGCATAATAATGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1604	chr19	57238399	57238599	+	1.96976	NA	intron (NM_001362445, intron 1 of 20)	intron (NM_001362445, intron 1 of 20)	-22467	NM_178688	226251	Mm.217161	NM_178688	ENSMUSG00000025085	Ablim1	2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059	actin-binding LIM protein 1	protein-coding	0.020000	0.477612	10(GATGAATTATTCATC,+,0.00),10(GATGAATTATTCATC,-,0.00)		
merged_common-166	chr3	143651546	143651746	+	1.96976	NA	Intergenic	Intergenic	60497	NR_040405	621809	Mm.360134	NR_040405	ENSMUSG00000105279	Gm6260	EG621809	predicted gene 6260	ncRNA	0.010000	0.368159			-73(TGTTTGTGATGGTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-792	chr13	15691146	15691346	+	1.96976	NA	intron (NM_008130, intron 10 of 14)	L1_Mur3|LINE|L1	111384	NR_045507	71071	Mm.380845	NR_045507	ENSMUSG00000113960	4933412O06Rik	-	RIKEN cDNA 4933412O06 gene	ncRNA	0.005000	0.358209			-45(CTTTTATCATGCAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1001	chr14	69994870	69995070	+	1.96976	NA	intron (NM_028560, intron 4 of 6)	intron (NM_028560, intron 4 of 6)	-82347	NM_001289925	13655	Mm.103737	NM_018781	ENSMUSG00000033730	Egr3	Pilot	early growth response 3	protein-coding	0.015000	0.562189			-19(ATTTGAAAGGCAAATG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-706	chr12	74155421	74155621	+	1.96976	NA	intron (NM_172804, intron 2 of 6)	intron (NM_172804, intron 2 of 6)	-128755	NR_030733	74284	Mm.287421	NR_030733	ENSMUSG00000071265	1700086L19Rik	1700006L05Rik|AU016007	RIKEN cDNA 1700086L19 gene	ncRNA	0.020000	0.402985	-44(CATGCATTATTCATC,+,0.00),-44(CATGCATTATTCATC,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1703	chr2	71211431	71211631	+	1.96976	NA	promoter-TSS (NM_001198878)	promoter-TSS (NM_001198878)	-175	NM_001198872	13427	Mm.249479	NM_010064	ENSMUSG00000027012	Dync1i2	3110079H08Rik|AW554389|Dncic2	dynein cytoplasmic 1 intermediate chain 2	protein-coding	0.005000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-2741	chr8	66448814	66449014	+	1.96976	NA	intron (NM_175188, intron 6 of 7)	intron (NM_175188, intron 6 of 7)	37616	NM_001357208	66282	Mm.294985	NM_025465	ENSMUSG00000025591	Tma16	1810029B16Rik	translation machinery associated 16	protein-coding	0.005000	0.298507			
ePOU_nocontrol_ChIP_peaks_unique-2504	chr6	113079747	113079947	+	1.96976	NA	intron (NM_028385, intron 1 of 21)	intron (NM_028385, intron 1 of 21)	2208	NM_028385	72895	Mm.367159	NM_028385	ENSMUSG00000034269	Setd5	2900045N06Rik|C330007C20|C85544|mKIAA1757	SET domain containing 5	protein-coding	0.000000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-1303	chr17	4493226	4493426	+	1.96976	NA	Intergenic	Intergenic	-141654	NR_130984	75117	Mm.429393	NR_130984	ENSMUSG00000116767	4930517M08Rik	-	RIKEN cDNA 4930517M08 gene	ncRNA	0.005000	0.388060		5(TATGCAAATGCATT,+,0.00),5(TATGCAAATGCATT,-,0.00)	-16(TCTTTCATATTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1745	chr2	110949287	110949487	+	1.96976	NA	intron (NM_001355246, intron 1 of 3)	intron (NM_001355246, intron 1 of 3)	857	NM_001355246	228432	Mm.483325	NM_001081556	ENSMUSG00000074968	Ano3	AI838058|B230324K02Rik|Tmem16c	anoctamin 3	protein-coding	0.005000	0.298507			20(ATTTAAATAACAAAGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-547	chr11	85462156	85462356	+	1.96976	NA	intron (NM_138681, intron 10 of 25)	intron (NM_138681, intron 10 of 25)	109092	NM_138681	192197	Mm.209989	NM_138681	ENSMUSG00000059439	Bcas3	1500019F07Rik|2610028P08Rik|AU021018|BC028339|K20D4|rudhira	breast carcinoma amplified sequence 3	protein-coding	0.010000	0.383085			25(GTATGAATCAGAAAGG,-,0.00)
merged_common-10	chr1	122381278	122381478	+	1.96976	NA	Intergenic	Intergenic	176233	NR_151524	102638832	Mm.112794	NR_151524	ENSMUSG00000099960	Gm28590	-	predicted gene 28590	ncRNA	0.005000	0.368159			-32(CTTAGAATAATAAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-536	chr11	79962563	79962763	+	1.96976	NA	promoter-TSS (NM_144826)	promoter-TSS (NM_144826)	-276	NM_144826	216987	Mm.274961	NM_144826	ENSMUSG00000035575	Utp6	4732497O03Rik|HCA66	UTP6 small subunit processome component	protein-coding	0.065000	0.462687			59(TGTTAATTATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-599	chr11	106216597	106216797	+	1.96976	NA	promoter-TSS (NM_026009)	promoter-TSS (NM_026009)	-229	NM_001361643	72047	Mm.41367	NM_028074	ENSMUSG00000020705	Ddx42	1810047H21Rik|AW319508|AW556242|B430002H05Rik|RHELP|RNAHP|SF3b125	DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	protein-coding	0.040000	0.482587			-28(ACATTCTTATGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-504	chr11	65356623	65356823	+	1.96976	NA	Intergenic	Intergenic	-68890	NR_040280	327946	Mm.383301	NR_040280	ENSMUSG00000085162	Gm12295	A730013G04	predicted gene 12295	ncRNA	0.010000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-2291	chr5	92112799	92112999	+	1.96976	NA	intron (NM_001359197, intron 1 of 10)	intron (NM_001359197, intron 1 of 10)	24826	NM_001359195	23881	Mm.290530	NM_011816	ENSMUSG00000029405	G3bp2	AA409541|E430034L04Rik|G3BP|mKIAA0660	GTPase activating protein (SH3 domain) binding protein 2	protein-coding	0.040000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-2183	chr4	150730117	150730317	+	1.96976	NA	Intergenic	L1MB7|LINE|L1	67735	NR_162802	114482888		NR_162802		Mir12196	mmu-mir-12196	microRNA mir-12196	ncRNA	0.025000	0.482587			
merged_common-45	chr11	72819256	72819456	+	1.96976	NA	intron (NM_001045536, intron 2 of 54)	intron (NM_001045536, intron 2 of 54)	23130	NM_001045536	195018	Mm.272030	NM_001045536	ENSMUSG00000055670	Zzef1	8430405D05Rik|BC051585|C130099L13Rik|C85424|NSPA|mKIAA0399	zinc finger, ZZ-type with EF hand domain 1	protein-coding	0.005000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-674	chr12	37253013	37253213	+	1.96976	NA	intron (NM_178767, intron 3 of 12)	intron (NM_178767, intron 3 of 12)	11474	NM_178767	319660	Mm.485540	NM_178767	ENSMUSG00000050103	Agmo	A530016O06Rik|AI790538|Tmem195	alkylglycerol monooxygenase	protein-coding	0.000000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-1740	chr2	106473687	106473887	+	1.96976	NA	intron (NR_040637, intron 1 of 2)	intron (NR_040637, intron 1 of 2)	49316	NR_040637	329483	Mm.246777	NR_040637	ENSMUSG00000087226	Gm14015	9330126M15	predicted gene 14015	ncRNA	0.005000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-2265	chr5	67777983	67778183	+	1.96976	NA	intron (NM_001284345, intron 7 of 36)	intron (NM_001284345, intron 7 of 36)	69348	NM_009727	11980	Mm.153230	NM_009727	ENSMUSG00000037685	Atp8a1	AI481521|AI853962|APLT|AW743152|AW822227|Atp3a2|B230107D19Rik|ClassI	ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	protein-coding	0.000000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-2534	chr6	139794346	139794546	+	1.96976	NA	intron (NM_207683, intron 17 of 31)	L1M5|LINE|L1	-46999	NM_011084	18705	Mm.333471	NM_011084	ENSMUSG00000030228	Pik3c2g	C80387|PI3K-C2-gamma	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma	protein-coding	0.000000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-2931	chr9	94838907	94839107	+	1.96976	NA	intron (NM_177909, intron 5 of 15)	intron (NM_177909, intron 5 of 15)	87178	NR_106116	102465763		NR_106116	ENSMUSG00000098251	Mir7656	Gm27614|mmu-mir-7656	microRNA 7656	ncRNA	0.020000	0.318408		70(TGTGAATATTCATC,+,0.00),70(TGTGAATATTCATC,-,0.00)	
merged_common-73	chr13	23401437	23401637	+	1.96976	NA	Intergenic	L1MA8|LINE|L1	22329	NM_013924	30946	Mm.292094	NM_013924	ENSMUSG00000036376	Abt1	-	activator of basal transcription 1	protein-coding	0.025000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-59	chr1	57259684	57259884	+	1.96976	NA	Intergenic	Intergenic	-44788	NR_037990	407809	Mm.134505	NR_037990	ENSMUSG00000101429	BC055402	-	cDNA sequence BC055402	ncRNA	0.015000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-115	chr1	97863188	97863388	+	1.96976	NA	intron (NM_001357127, intron 15 of 25)	intron (NM_001357127, intron 15 of 25)	93116	NM_026250	252876	Mm.86090	NM_026250	ENSMUSG00000026333	Gin1	4930429M06Rik|8430411H10Rik|Gin-1|Zh2c2	gypsy retrotransposon integrase 1	protein-coding	0.015000	0.422886	31(GTTGAATAATTCATG,+,0.00),31(GTTGAATAATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-786	chr13	12255263	12255463	+	1.96976	NA	intron (NM_001081128, intron 1 of 32)	intron (NM_001081128, intron 1 of 32)	2750	NM_001081128	238505	Mm.40335	NM_001081128	ENSMUSG00000021311	Mtr	AI894170|D830038K18Rik|MS	5-methyltetrahydrofolate-homocysteine methyltransferase	protein-coding	0.025000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-1396	chr17	83158229	83158429	+	1.96976	NA	Intergenic	Intergenic	-56954	NM_134117	106522	Mm.311974	NM_134117	ENSMUSG00000024247	Pkdcc	AI115348|AW548124|Adtk1|ESTM17|MAd1|Sgk493|Vlk|X83346	protein kinase domain containing, cytoplasmic	protein-coding	0.015000	0.383085			
merged_common-12	chr1	172242534	172242734	+	1.96976	NA	intron (NM_013734, intron 11 of 22)	intron (NM_013734, intron 11 of 22)	15790	NM_013734	27222	Mm.482392	NM_013734	ENSMUSG00000007107	Atp1a4	-	ATPase, Na+/K+ transporting, alpha 4 polypeptide	protein-coding	0.005000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-762	chr12	102745188	102745388	+	1.96976	NA	3' UTR (NM_001324515, exon 2 of 2)	3' UTR (NM_001324515, exon 2 of 2)	1528	NM_177140	320351	Mm.86546	NM_177140	ENSMUSG00000046675	Tmem251	D230037D09Rik	transmembrane protein 251	protein-coding	0.005000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-916	chr13	117728142	117728342	+	1.96976	NA	intron (NM_010408, intron 2 of 7)	intron (NM_010408, intron 2 of 7)	-8231	NR_045508	71100	Mm.414841	NR_045508	ENSMUSG00000079048	4933413L06Rik	-	RIKEN cDNA 4933413L06 gene	ncRNA	0.000000	0.323383			
ePOU_nocontrol_ChIP_peaks_unique-1457	chr18	44307340	44307540	+	1.96976	NA	Intergenic	L1MB5|LINE|L1	-26634	NM_001033621	58916	Mm.143804	NM_001033621	ENSMUSG00000024471	Myot	5530402I04Rik|Ttid	myotilin	protein-coding	0.000000	0.318408			
ePOU_nocontrol_ChIP_peaks_unique-72	chr1	62832345	62832545	+	1.96976	NA	Intergenic	MIRc|SINE|MIR	-37713	NR_040601	74992	Mm.401979	NR_040601		4930487H11Rik	-	RIKEN cDNA 4930487H11 gene	ncRNA	0.000000	0.388060			54(TTATTTTAATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2792	chr8	104088009	104088209	+	1.96976	NA	TTS (NR_131138)	TTS (NR_131138)	-13516	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding	0.000000	0.437811	-16(ATTGCATTATTCATG,+,0.00),-16(ATTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-311	chr10	44997786	44997986	+	1.96976	NA	Intergenic	Intergenic	-69330	NM_011156	19072	Mm.37294	NM_011156	ENSMUSG00000019849	Prep	AI047692|AI450383|D10Wsu136e|PE|PEP|Pop	prolyl endopeptidase	protein-coding	0.030000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-1438	chr18	25427275	25427475	+	1.96976	NA	intron (NM_001033532, intron 10 of 10)	RLTR11A|LTR|ERVK	252373	NM_001362337	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding	0.005000	0.437811			-30(GTATTCTAATGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-28	chr1	30169206	30169406	+	1.96976	NA	Intergenic	Intergenic	-30470	NR_157039	102633704		NR_157037		Gm31465	-	predicted gene, 31465	ncRNA	0.000000	0.318408			45(CTTTGCAAAACAATGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2272	chr5	76081375	76081575	+	1.89143	NA	Intergenic	RLTR13B3|LTR|ERVK	-58798	NM_020611	57357	Mm.289446	NM_020611	ENSMUSG00000029233	Srd5a3	1110025P14Rik|A430076C09|AV364670|AW987574|D730040M03Rik|H5ar|S5AR 3|Srd5a2l	steroid 5 alpha-reductase 3	protein-coding	0.010000	0.432836	37(CATGAATAATGCAAT,+,0.00),37(CATGAATAATGCAAT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1012	chr14	77037965	77038165	+	1.89143	NA	intron (NM_175369, intron 1 of 5)	intron (NM_175369, intron 1 of 5)	1293	NM_175369	108811	Mm.102168	NM_175369	ENSMUSG00000034795	Ccdc122	4933415L06Rik	coiled-coil domain containing 122	protein-coding	0.020000	0.422886	-9(CATGCATAATTCATT,+,0.00),-9(CATGCATAATTCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-245	chr10	7873557	7873757	+	1.89143	NA	Intergenic	RLTR13B4|LTR|ERVK	37276	NR_039563	100628581		NR_039563	ENSMUSG00000093060	Mir5104	mir-5104|mmu-mir-5104|mu-mir-5104	microRNA 5104	ncRNA	0.010000	0.417910	-23(CATGAATAATGCAAC,+,0.00),-23(CATGAATAATGCAAC,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-298	chr10	39209921	39210121	+	1.89143	NA	Intergenic	Intergenic	-46227	NM_001127376	327743	Mm.208111	NM_001127376	ENSMUSG00000062074	Ccn6	Gm735|WISP-3|Wisp3	cellular communication network factor 6	protein-coding	0.000000	0.378109	-8(ATTGAATAATACATG,+,0.00),-8(ATTGAATAATACATG,-,0.00)		-77(ATATTCTCATTTAAAT,+,0.00),31(ATTTGCAAATGAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1549	chr19	18630494	18630694	+	1.89143	NA	intron (NM_017375, intron 1 of 9)	intron (NM_017375, intron 1 of 9)	1219	NM_017375	20409	Mm.172222	NM_017375	ENSMUSG00000024725	Ostf1	C78236|SH3P2|Sh3d3	osteoclast stimulating factor 1	protein-coding	0.025000	0.472637			
ePOU_nocontrol_ChIP_peaks_unique-29	chr1	30584993	30585193	+	1.79001	NA	Intergenic	Intergenic	278163	NM_001081080	213109	Mm.194486	NM_025871	ENSMUSG00000048874	Phf3	2310061N19Rik	PHD finger protein 3	protein-coding	0.010000	0.343284			-6(ATTTGCATAAAACATG,-,0.00),24(TGTTTGTCTAGCATAT,+,0.00)
merged_common-158	chr3	34310750	34310950	+	1.79001	NA	Intergenic	Intergenic	-229496	NM_001286972	67713	Mm.274266	NM_026332	ENSMUSG00000027679	Dnajc19	1810055D05Rik|AA959924|Tim14	DnaJ heat shock protein family (Hsp40) member C19	protein-coding	0.000000	0.353234	-53(ATTGAATTATTCAAG,-,0.00),-19(TATGAGTTATGCATT,+,0.00)	-33(ACTGCATATTCAAA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-77	chr1	66066735	66066935	+	1.79001	NA	Intergenic	Intergenic	-108494	NM_008632	17756	Mm.256966	NM_008632	ENSMUSG00000015222	Map2	G1-397-34|MAP-2|Mtap-2|Mtap2|repro4	microtubule-associated protein 2	protein-coding	0.005000	0.328358	12(TATACATTATTCATG,+,0.00),12(TATACATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1410	chr17	88511340	88511540	+	1.79001	NA	Intergenic	Intergenic	-18684	NM_028658	73825	Mm.271817	NM_028658	ENSMUSG00000034709	Ppp1r21	1110018J12Rik|AI426045|AW550781|Ccdc128|Klraq1	protein phosphatase 1, regulatory subunit 21	protein-coding	0.020000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-314	chr10	45700749	45700949	+	1.79001	NA	intron (NM_172473, intron 21 of 23)	intron (NM_172473, intron 21 of 23)	-106855	NR_040624	320363	Mm.123343	NR_040624	ENSMUSG00000110874	D030045P18Rik	-	RIKEN cDNA D030045P18 gene	ncRNA	0.000000	0.308458	23(TATGAATATTGCATG,+,0.00),23(TATGAATATTGCATG,-,0.00)		-85(ATTAACAAAGTAAAGA,-,0.00)
merged_common-109	chr16	33689219	33689419	+	1.79001	NA	intron (NM_175256, intron 1 of 14)	(TATATG)n|Simple_repeat|Simple_repeat	4853	NM_175256	77446	Mm.245741	NM_172934	ENSMUSG00000075254	Heg1	4632417D23Rik|5530401I02Rik|9530025L16Rik|BC038614|Gm629	heart development protein with EGF-like domains 1	protein-coding	0.005000	0.338308		-86(CATGCATATGTATA,+,0.00),-86(CATGCATATGTATA,-,0.00),-80(TATGTATATGTATA,+,0.00),-74(TATGTATATGTATA,+,0.00),-68(TATGTATATGTATA,+,0.00),-62(TATGTATATGTATA,+,0.00),-56(TATGTATATGTATA,+,0.00),-50(TATGTATATGTATA,+,0.00),-32(TATGTATATGTATA,+,0.00),-26(TATGTATATGTATA,+,0.00),-20(TATGTATATGTATA,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1141	chr15	80799077	80799277	+	1.79001	NA	intron (NM_177124, intron 1 of 21)	intron (NM_177124, intron 1 of 21)	567	NM_177124	213988	Mm.131328	NM_144812	ENSMUSG00000047888	Tnrc6b	2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik	trinucleotide repeat containing 6b	protein-coding	0.010000	0.417910			-13(ATTTGCATAAATATAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1197	chr16	18248661	18248861	+	1.79001	NA	promoter-TSS (NM_011239)	promoter-TSS (NM_011239)	-67	NM_011239	19385	Mm.235287	NM_011239	ENSMUSG00000005732	Ranbp1	Htf9a	RAN binding protein 1	protein-coding	0.140000	0.711443			
ePOU_nocontrol_ChIP_peaks_unique-581	chr11	99323813	99324013	+	1.79001	NA	promoter-TSS (NM_133730)	promoter-TSS (NM_133730)	-962	NM_133730	70810	Mm.268173	NM_133730	ENSMUSG00000035831	Krt25	4631426H08Rik|CK-25|K25|Ka38|Krt25a|mIRSa1	keratin 25	protein-coding	0.020000	0.402985			7(CAGTTTTCATGCAAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-131	chr1	125463663	125463863	+	1.79001	NA	Intergenic	Intergenic	-28036	NM_001205386	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding	0.010000	0.398010	29(TATGCATAATTCATG,+,0.00),29(TATGCATAATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1601	chr19	52517571	52517771	+	1.79001	NA	Intergenic	Intergenic	253374	NM_008386	16333	Mm.46269	NM_008386	ENSMUSG00000035804	Ins1	Ins-1|Ins2-rs1	insulin I	protein-coding	0.000000	0.407960		33(TATGAATATGCATT,+,0.00),33(TATGAATATGCATT,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-125	chr1	119388757	119388957	+	1.79001	NA	Intergenic	Intergenic	33391	NM_008381	16324	Mm.3092	NM_008381	ENSMUSG00000037035	Inhbb	-	inhibin beta-B	protein-coding	0.045000	0.587065	-9(GATGCATAATTCATG,+,0.00),-9(GATGCATAATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-393	chr10	114216874	114217074	+	1.79001	NA	Intergenic	Intergenic	584396	NM_146241	237553	Mm.445550	NM_146241	ENSMUSG00000050663	Trhde	9330155P21Rik	TRH-degrading enzyme	protein-coding	0.000000	0.343284			-34(TTCTACATGACAATGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-788	chr13	12503379	12503579	+	1.79001	NA	intron (NM_133643, intron 3 of 5)	intron (NM_133643, intron 3 of 5)	16971	NM_133643	171211	Mm.159671	NM_133643	ENSMUSG00000095105	Edaradd	1810032E07Rik|5830469M23Rik|A630043P06|cr	EDAR (ectodysplasin-A receptor)-associated death domain	protein-coding	0.020000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-1129	chr15	73637549	73637749	+	1.79001	NA	Intergenic	Intergenic	-12905	NM_001033219	106068	Mm.212813	NM_001033219	ENSMUSG00000079020	Slc45a4	9330175B01Rik|AW552276	solute carrier family 45, member 4	protein-coding	0.005000	0.552239			
ePOU_nocontrol_ChIP_peaks_unique-689	chr12	54353141	54353341	+	1.79001	NA	Intergenic	Intergenic	38077	NR_033689	665239	Mm.26856	NR_033689		Gm7550	EG665239|Gm666	predicted gene 7550	ncRNA	0.025000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-1072	chr15	23257921	23258121	+	1.79001	NA	intron (NM_001081299, intron 3 of 11)	intron (NM_001081299, intron 3 of 11)	221558	NM_001081299	320865	Mm.241965	NM_001081299	ENSMUSG00000040420	Cdh18	B230220E17Rik|Cdh14l|Tg(GFAP-APOE_i4)1Hol	cadherin 18	protein-coding	0.005000	0.343284			-22(TCATTGATATGCAATT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-649	chr12	24536267	24536467	+	1.79001	NA	intron (NR_028341, intron 7 of 13)	intron (NR_028341, intron 7 of 13)	-35920	NM_001161406	195733	Mm.263068	NM_145890	ENSMUSG00000020656	Grhl1	LBP-32|MGR|Tcfcp2l2	grainyhead like transcription factor 1	protein-coding	0.000000	0.298507			
ePOU_nocontrol_ChIP_peaks_unique-1003	chr14	73219662	73219862	+	1.79001	NA	intron (NM_009029, intron 17 of 26)	intron (NM_009029, intron 17 of 26)	-12911	NR_030459	751541		NR_030459	ENSMUSG00000076121	Mir687	Mirn687|mir-687|mmu-mir-687	microRNA 687	ncRNA	0.000000	0.358209			-43(ATTAGCAAACCAAAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-557	chr11	87013458	87013658	+	1.79001	NA	Intergenic	B3|SINE|B2	-19796	NM_001005341	77864	Mm.191894	NM_001005341	ENSMUSG00000018427	Ypel2	6430570G24|E130113K08Rik	yippee like 2	protein-coding	0.005000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-1553	chr19	22287998	22288198	+	1.79001	NA	intron (NM_001035239, intron 1 of 24)	intron (NM_001035239, intron 1 of 24)	149052	NM_001035240	226025	Mm.131943	NM_177341	ENSMUSG00000052387	Trpm3	6330504P12Rik|9330180E14|AU018608|B930001P07Rik|LTRPC3|MLSN2	transient receptor potential cation channel, subfamily M, member 3	protein-coding	0.005000	0.358209			-83(ATTAGCAAGTCAAATC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1785	chr2	134229429	134229629	+	1.79001	NA	Intergenic	Intergenic	324823	NM_010403	15112	Mm.26634	NM_010403	ENSMUSG00000027261	Hao1	GOX|Gox1|Hao-1	hydroxyacid oxidase 1, liver	protein-coding	0.005000	0.363184			-49(CTCTAGTCTTTCAAAT,+,0.00),-35(ATTTCCATTATAATGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-812	chr13	29986070	29986270	+	1.79001	NA	promoter-TSS (NM_010093)	promoter-TSS (NM_010093)	-107	NM_010093	13557	Mm.268356	NM_010093	ENSMUSG00000016477	E2f3	E2F3b|E2f3a	E2F transcription factor 3	protein-coding	0.055000	0.567164			
ePOU_nocontrol_ChIP_peaks_unique-2918	chr9	84567454	84567654	+	1.79001	NA	Intergenic	Intergenic	-206844	NR_040739	75253	Mm.401984	NR_040739	ENSMUSG00000099724	4930554C24Rik	-	RIKEN cDNA 4930554C24 gene	ncRNA	0.005000	0.363184	-6(AATGCATTATTCATG,+,0.00),-6(AATGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2709	chr8	33394028	33394228	+	1.79001	NA	intron (NM_001098233, intron 1 of 1)	intron (NM_001098233, intron 1 of 1)	7803	NM_152821	75029	Mm.159402	NM_152821	ENSMUSG00000049184	Purg	4930486B15Rik	purine-rich element binding protein G	protein-coding	0.015000	0.353234			
merged_common-146	chr2	103209574	103209774	+	1.79001	NA	Intergenic	Intergenic	93522	NM_007914	13661	Mm.10724	NM_007914	ENSMUSG00000012350	Ehf	9030625L19Rik|AU019492	ets homologous factor	protein-coding	0.020000	0.407960			-9(AATAGCATAACAATGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-120	chr1	106759856	106760056	+	1.79001	NA	promoter-TSS (NM_027534)	promoter-TSS (NM_027534)	-214	NM_027534	70750	Mm.458911	NM_027534	ENSMUSG00000009905	Kdsr	6330410P18Rik|9430079B08Rik|Fvt1	3-ketodihydrosphingosine reductase	protein-coding	0.055000	0.492537			
ePOU_nocontrol_ChIP_peaks_unique-1172	chr15	103168933	103169133	+	1.79001	NA	Intergenic	CpG	-5749	NM_027885	71726	Mm.254820	NM_027885	ENSMUSG00000036061	Smug1	1200013B09Rik|A930006H09Rik|C85220	single-strand selective monofunctional uracil DNA glycosylase	protein-coding	0.110000	0.681592			-19(ATTTGCATGAGATCAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1555	chr19	24051001	24051201	+	1.79001	NA	Intergenic	(TCTCCC)n|Simple_repeat|Simple_repeat	-20082	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding	0.005000	0.447761	-38(AATGAATAATGCATG,+,0.00),-38(AATGAATAATGCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2567	chr7	34246914	34247114	+	1.79001	NA	intron (NM_172741, intron 8 of 12)	intron (NM_172741, intron 8 of 12)	-16678	NM_008155	14751	Mm.589	NM_008155	ENSMUSG00000036427	Gpi1	Amf|Gpi|Gpi-1|Gpi-1r|Gpi-1s|Gpi-1t|Gpi1-r|Gpi1-s|Gpi1-t|Gpi1s|MF|NK|NK/GPI|Nlk|Org|Pgi|Phi	glucose phosphate isomerase 1	protein-coding	0.000000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-2152	chr4	123301139	123301339	+	1.79001	NA	Intergenic	RLTR13B1|LTR|ERVK	18328	NM_130881	230721	Mm.277091	NM_130881	ENSMUSG00000011257	Pabpc4	-	poly(A) binding protein, cytoplasmic 4	protein-coding	0.010000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-2789	chr8	103122749	103122949	+	1.79001	NA	Intergenic	Intergenic	224685	NR_036588	69794	Mm.396139	NR_036588	ENSMUSG00000110340	1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA	0.005000	0.338308			
merged_common-107	chr16	18289158	18289358	+	1.79001	NA	promoter-TSS (NM_033324)	promoter-TSS (NM_033324)	-90	NM_033324	94223	Mm.447352	NM_033324	ENSMUSG00000022718	Dgcr8	D16H22S1742E|D16H22S788E|D16Wis2|Gy1|N41|Vo59c07|mir-1306	DGCR8, microprocessor complex subunit	protein-coding	0.160000	0.761194			
ePOU_nocontrol_ChIP_peaks_unique-1136	chr15	76799745	76799945	+	1.79001	NA	intron (NM_198420, intron 1 of 10)	intron (NM_198420, intron 1 of 10)	18321	NM_198420	223666	Mm.322931	NM_198420	ENSMUSG00000033697	Arhgap39	9530053N22|AI843066|D15Wsu169e|Kiaa1688|Porf-2	Rho GTPase activating protein 39	protein-coding	0.000000	0.368159	-96(TCTGAATAATTCATG,+,0.00),-96(TCTGAATAATTCATG,-,0.00)		
merged_common-111	chr16	58553239	58553439	+	1.79001	NA	Intergenic	Intergenic	-29086	NM_001357435	54613	Mm.212742	NM_018784	ENSMUSG00000022747	St3gal6	1700023B24Rik|AI930218|AW552396|Siat10|St3galVI	ST3 beta-galactoside alpha-2,3-sialyltransferase 6	protein-coding	0.005000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-1155	chr15	93595862	93596062	+	1.79001	NA	promoter-TSS (NM_001033217)	promoter-TSS (NM_001033217)	-60	NM_001033217	106042	Mm.150314	NM_001033217	ENSMUSG00000036158	Prickle1	1110058P22Rik|AW215793|Prickle|b2b019Clo|mpk1	prickle planar cell polarity protein 1	protein-coding	0.165000	0.800995			
ePOU_nocontrol_ChIP_peaks_unique-2321	chr5	113180422	113180622	+	1.79001	NA	Intergenic	Intergenic	-17209	NM_172884	243219	Mm.160131	NM_172884	ENSMUSG00000051339	2900026A02Rik	8430408O14Rik|A530094D01|AW539426|Gm449|Kiaa1671|mKIAA1671	RIKEN cDNA 2900026A02 gene	protein-coding	0.020000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-2803	chr8	114121754	114121954	+	1.79001	NA	Intergenic	Intergenic	-11720	NM_024437	67528	Mm.27889	NM_024437	ENSMUSG00000031767	Nudt7	1300007B24Rik|2210404C19Rik	nudix (nucleoside diphosphate linked moiety X)-type motif 7	protein-coding	0.000000	0.383085			58(TTCTGAATGACAAAGC,-,0.00)
merged_common-24	chr10	81082387	81082587	+	1.79001	NA	TTS (NM_022653)	TTS (NM_022653)	12404	NM_022653	50492	Mm.26995	NM_022653	ENSMUSG00000004929	Thop1	AI131655|AI327041|EP24.15	thimet oligopeptidase 1	protein-coding	0.000000	0.492537			9(TTCTGCATAACAAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2928	chr9	94188332	94188532	+	1.79001	NA	Intergenic	Intergenic	349649	NM_001033145	68861	Mm.258746	NM_001033145	ENSMUSG00000045414	Dipk2a	1190002N15Rik|GoPro49|HASF	divergent protein kinase domain 2A	protein-coding	0.000000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-1031	chr14	103099503	103099703	+	1.79001	NA	promoter-TSS (NM_001347600)	promoter-TSS (NM_001347600)	-37	NM_001360342	50789	Mm.214746	NM_015822	ENSMUSG00000022124	Fbxl3	AU041772|AW212966|FBK|Fbl3a|Fbxl3a|Ovtm|Play68	F-box and leucine-rich repeat protein 3	protein-coding	0.135000	0.731343			
ePOU_nocontrol_ChIP_peaks_unique-2490	chr6	100254050	100254250	+	1.79001	NA	intron (NM_019743, intron 2 of 4)	intron (NM_019743, intron 2 of 4)	33208	NM_019743	56353	Mm.321633	NM_019743	ENSMUSG00000072872	Rybp	2410018J24Rik|DEDAF|YEAF1	RING1 and YY1 binding protein	protein-coding	0.005000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-1334	chr17	27240406	27240606	+	1.79001	NA	intron (NR_131118, intron 1 of 2)	ID_B1|SINE|B4	7560	NR_131118	319720	Mm.394996	NR_131118	ENSMUSG00000117916	9630028I04Rik	-	RIKEN cDNA 9630028I04 gene	ncRNA	0.010000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-1127	chr15	71287971	71288171	+	1.79001	NA	Intergenic	Intergenic	439767	NM_177819	70363	Mm.126450	NM_177819	ENSMUSG00000036800	Fam135b	1700010C24Rik|A830008O07Rik	family with sequence similarity 135, member B	protein-coding	0.000000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-2643	chr7	110268477	110268677	+	1.79001	NA	intron (NM_009302, intron 6 of 11)	intron (NM_009302, intron 6 of 11)	46874	NM_009302	20947	Mm.334144	NM_009302	ENSMUSG00000031015	Swap70	70kDa|AV235546	SWA-70 protein	protein-coding	0.010000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-1404	chr17	85874163	85874363	+	1.79001	NA	Intergenic	Intergenic	-186009	NM_011380	20472	Mm.5039	NM_011380	ENSMUSG00000024134	Six2	-	sine oculis-related homeobox 2	protein-coding	0.025000	0.432836	1(AATGCATTATTCATG,+,0.00),1(AATGCATTATTCATG,-,0.00)		-65(CTTTTTTTTTTTTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1545	chr19	16448399	16448599	+	1.79001	NA	intron (NM_008137, intron 1 of 6)	intron (NM_008137, intron 1 of 6)	12832	NM_008137	14675	Mm.313181	NM_008137	ENSMUSG00000024697	Gna14	AU023208	guanine nucleotide binding protein, alpha 14	protein-coding	0.000000	0.393035	-52(TATGAATAATTCAAC,+,0.00),-52(TATGAATAATTCAAC,-,0.00)		-23(CTTTTGTGATGTTTAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2664	chr7	127477922	127478122	+	1.79001	NA	promoter-TSS (NM_010183)	promoter-TSS (NM_010183)	-936	NM_010183	14123	Mm.323505	NM_010183	ENSMUSG00000042423	Fbrs	Fbs|Fbs1	fibrosin	protein-coding	0.045000	0.557214			
ePOU_nocontrol_ChIP_peaks_unique-369	chr10	93160684	93160884	+	1.79001	NA	promoter-TSS (NM_146239)	promoter-TSS (NM_146239)	-92	NM_146239	237459	Mm.217404	NM_146239	ENSMUSG00000020015	Cdk17	6430598J10Rik|Pctk2	cyclin-dependent kinase 17	protein-coding	0.095000	0.532338			
ePOU_nocontrol_ChIP_peaks_unique-1709	chr2	75151251	75151451	+	1.79001	NA	Intergenic	Intergenic	292828	NR_040635	77269	Mm.389278	NR_040635		9430019J16Rik	-	RIKEN cDNA 9430019J16 gene	ncRNA	0.010000	0.318408	-48(AATGCATTATTCATC,+,0.00),-48(AATGCATTATTCATC,-,0.00)		49(ATTTACATTGCAAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-624	chr11	119593029	119593229	+	1.79001	NA	Intergenic	Intergenic	-9776	NM_001306081	74370	Mm.209933	NM_028898	ENSMUSG00000025583	Rptor	4932417H02Rik|Rap|Raptor|mKIAA1303	regulatory associated protein of MTOR, complex 1	protein-coding	0.025000	0.522388	33(CGTGAATAATTCATG,+,0.00),33(CGTGAATAATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1510	chr19	3668369	3668569	+	1.79001	NA	intron (NM_008513, intron 1 of 22)	intron (NM_008513, intron 1 of 22)	18095	NM_008513	16973	Mm.274581	NM_008513	ENSMUSG00000024913	Lrp5	BMND1|HBM|LR3|LRP7|OPPG|mKIAA4142	low density lipoprotein receptor-related protein 5	protein-coding	0.000000	0.442786			17(CATTTACAATGCAAAT,+,0.00),18(ATTTACAATGCAAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-198	chr1	174964168	174964368	+	1.79001	NA	Intergenic	MLT1E2|LTR|ERVL-MaLR	-42449	NM_011825	23893	Mm.25760	NM_011825	ENSMUSG00000050069	Grem2	Gremlin2|Prdc	gremlin 2, DAN family BMP antagonist	protein-coding	0.000000	0.398010			-52(ATTAGCATAACAATGA,-,0.00)
merged_common-97	chr15	51536396	51536596	+	1.79001	NA	Intergenic	Intergenic	-140886	NR_045092	100502643	Mm.131987	NR_045092	ENSMUSG00000115654	Gm19303	-	predicted gene, 19303	ncRNA	0.010000	0.383085			
Oct4_nocontrol_ChIP_peaks_unique-10	chr10	4333422	4333622	+	1.79001	NA	intron (NM_031185, intron 2 of 3)	intron (NM_031185, intron 2 of 3)	53953	NM_001359811	381990	Mm.262466	NM_001033466	ENSMUSG00000075327	Zbtb2	Gm1103	zinc finger and BTB domain containing 2	protein-coding	0.020000	0.502488			-42(TCTTTGTAATGCTGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-413	chr11	5383322	5383522	+	1.79001	NA	intron (NM_001080924, intron 1 of 8)	intron (NM_001080924, intron 1 of 8)	-1682	NM_001290501	407821	Mm.216313	NM_001080924	ENSMUSG00000041961	Znrf3	Gm1167	zinc and ring finger 3	protein-coding	0.005000	0.328358			
ePOU_nocontrol_ChIP_peaks_unique-104	chr1	91024373	91024573	+	1.79001	NA	intron (NM_001111312, intron 1 of 12)	intron (NM_001111312, intron 1 of 12)	25746	NM_001111312	16978	Mm.45039	NM_008515	ENSMUSG00000026305	Lrrfip1	AU024550|Fliiap1	leucine rich repeat (in FLII) interacting protein 1	protein-coding	0.005000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-1594	chr19	49505828	49506028	+	1.79001	NA	Intergenic	Intergenic	1172718	NM_001360457	58178	Mm.313672	NM_021377	ENSMUSG00000043531	Sorcs1	Sorcs|mSorCS	sortilin-related VPS10 domain containing receptor 1	protein-coding	0.015000	0.393035			-23(TTGTTGTTATGATAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1412	chr17	90348901	90349101	+	1.79001	NA	intron (NM_001346957, intron 15 of 18)	intron (NM_001346957, intron 15 of 18)	106879	NM_001346958	18189	Mm.478418	NM_020252	ENSMUSG00000024109	Nrxn1	1700062G21Rik|9330127H16Rik|A230068P09Rik|mKIAA0578	neurexin I	protein-coding	0.005000	0.323383			
ePOU_nocontrol_ChIP_peaks_unique-2675	chr7	136267974	136268174	+	1.79001	NA	promoter-TSS (NR_102277)	promoter-TSS (NR_102277)	-250	NR_102277	77383	Mm.227745	NR_102277	ENSMUSG00000110027	C030029H02Rik	-	RIKEN cDNA C030029H02 gene	ncRNA	0.015000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-279	chr10	26639207	26639407	+	1.79001	NA	Intergenic	Intergenic	35344	NR_033633	667572	Mm.482728	NR_033633	ENSMUSG00000098179	Gm8709	EG667572	glyceraldehyde-3-phosphate dehydrogenase pseudogene	pseudo	0.005000	0.348259	19(AATGAATTATTCATT,+,0.00),19(AATGAATTATTCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2520	chr6	128803226	128803426	+	1.79001	NA	Intergenic	Intergenic	-14685	NM_001159904	17059	Mm.480764	NM_008527	ENSMUSG00000030325	Klrb1c	AI462337|CD161|Klrb1b|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1b|Nkrp1c|ly-55c	killer cell lectin-like receptor subfamily B member 1C	protein-coding	0.045000	0.562189			
ePOU_nocontrol_ChIP_peaks_unique-1891	chr3	53218984	53219184	+	1.79001	NA	intron (NM_175386, intron 2 of 3)	intron (NM_175386, intron 2 of 3)	177537	NM_175386	108927	Mm.118617	NM_175386	ENSMUSG00000048332	Lhfp	2810489O06Rik|AI194968|Lhfpl6	lipoma HMGIC fusion partner	protein-coding	0.010000	0.293532			
ePOU_nocontrol_ChIP_peaks_unique-1501	chr18	76241191	76241391	+	1.79001	NA	promoter-TSS (NM_010754)	promoter-TSS (NM_010754)	-410	NM_010754	17126	Mm.152699	NM_010754	ENSMUSG00000024563	Smad2	7120426M23Rik|Madh2|Madr2|Smad-2|mMad2	SMAD family member 2	protein-coding	0.100000	0.746269			
ePOU_nocontrol_ChIP_peaks_unique-2009	chr3	138041941	138042141	+	1.79001	NA	Intergenic	Intergenic	-20201	NM_001370862	102634333	Mm.45669	NM_001370862	ENSMUSG00000090066	1110002E22Rik	100039528|AI415341|Gm2292	RIKEN cDNA 1110002E22 gene	protein-coding	0.010000	0.422886			-100(CTATAGGTATTCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-991	chr14	65438897	65439097	+	1.79001	NA	Intergenic	Looper|DNA|PiggyBac	-13525	NM_010932	18155	Mm.16347	NM_010932	ENSMUSG00000045731	Pnoc	N/OFQ|Npnc1|OFQ/N	prepronociceptin	protein-coding	0.010000	0.393035	-17(TATGCATTATTCATG,+,0.00),-17(TATGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1394	chr17	80845328	80845528	+	1.79001	NA	Intergenic	Intergenic	-51365	NR_131127	320784	Mm.474182	NR_131127	ENSMUSG00000112121	C230072F16Rik	-	RIKEN cDNA C230072F16 gene	ncRNA	0.005000	0.467662	65(GATGAATAATGCATG,+,0.00),65(GATGAATAATGCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-396	chr10	116485744	116485944	+	1.79001	NA	3' UTR (NM_001359253, exon 12 of 12)	3' UTR (NM_001359253, exon 12 of 12)	-12321	NM_021452	58802	Mm.440652	NM_021452	ENSMUSG00000054934	Kcnmb4	1700058G18Rik|2900045G12Rik	potassium large conductance calcium-activated channel, subfamily M, beta member 4	protein-coding	0.005000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-2171	chr4	139048761	139048961	+	1.79001	NA	intron (NM_029857, intron 14 of 16)	intron (NM_029857, intron 14 of 16)	25928	NM_021358	15565	Mm.291096	NM_021358	ENSMUSG00000028747	Htr6	5-HT6	5-hydroxytryptamine (serotonin) receptor 6	protein-coding	0.010000	0.452736		-9(TATGAATATGCATA,+,0.00),-9(TATGAATATGCATA,-,0.00),-3(TATGCATAAGTATT,+,0.00)	-22(ATTTACATAAGAATAT,-,0.00),-4(ATATGCATAAGTATTT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1826	chr2	165809997	165810197	+	1.79001	NA	intron (NM_001363020, intron 14 of 22)	intron (NM_001363020, intron 14 of 22)	48076	NM_001252585	228880	Mm.227598	NM_027230	ENSMUSG00000039671	Zmynd8	1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7	zinc finger, MYND-type containing 8	protein-coding	0.010000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-1921	chr3	68828984	68829184	+	1.79001	NA	Intergenic	Intergenic	-40502	NM_001167996	68725	Mm.45741	NM_001167996	ENSMUSG00000046999	1110032F04Rik	AI115547	RIKEN cDNA 1110032F04 gene	protein-coding	0.015000	0.338308	2(TATGCATTATTTATA,+,0.00),2(TATGCATTATTTATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-884	chr13	95891492	95891692	+	1.79001	NA	intron (NM_027711, intron 1 of 35)	CpG	330	NM_027711	544963	Mm.38878	NM_027711	ENSMUSG00000021676	Iqgap2	4933417J23Rik|A630053O10|AI788777	IQ motif containing GTPase activating protein 2	protein-coding	0.090000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-458	chr11	37770623	37770823	+	1.79001	NA	Intergenic	Intergenic	111734	NR_131154	100039148	Mm.120467	NR_131154	ENSMUSG00000087388	Gm12128	-	predicted gene 12128	ncRNA	0.005000	0.338308			-3(CCTTTCAAATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1808	chr2	151741236	151741436	+	1.79001	NA	promoter-TSS (NM_001305244)	promoter-TSS (NM_001305244)	-26	NM_001305244	228769	Mm.146984	NM_144889	ENSMUSG00000032869	Psmf1	AW048666|BC012260|PI31	proteasome (prosome, macropain) inhibitor subunit 1	protein-coding	0.085000	0.557214			
ePOU_nocontrol_ChIP_peaks_unique-2299	chr5	102968844	102969044	+	1.79001	NA	intron (NM_001310686, intron 7 of 11)	intron (NM_001310686, intron 7 of 11)	89448	NM_001310686	26414	Mm.39253	NM_009158	ENSMUSG00000046709	Mapk10	C230008H04Rik|JNK3|JNK3B1|JNK3B2|SAPK(beta)|Serk2|p493F12|p54bSAPK	mitogen-activated protein kinase 10	protein-coding	0.005000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-1050	chr15	3426764	3426964	+	1.79001	NA	intron (NM_001048178, intron 2 of 8)	intron (NM_001048178, intron 2 of 8)	-123338	NM_001166063	100039139	Mm.455610	NM_001166063	ENSMUSG00000091119	Ccdc152	-	coiled-coil domain containing 152	protein-coding	0.005000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-1180	chr16	4880493	4880693	+	1.79001	NA	promoter-TSS (NM_145359)	promoter-TSS (NM_145359)	-742	NM_145359	207740	Mm.268895	NM_145359	ENSMUSG00000039568	Ubald1	1500031H01Rik|BC013706|Fam100a	UBA-like domain containing 1	protein-coding	0.095000	0.651741			
ePOU_nocontrol_ChIP_peaks_unique-417	chr11	7283169	7283369	+	1.79001	NA	Intergenic	MER5A|DNA|hAT-Charlie	-69346	NM_008343	16009	Mm.29254	NM_008343	ENSMUSG00000020427	Igfbp3	AI649005|IGFBP-3|IGgfbp3	insulin-like growth factor binding protein 3	protein-coding	0.015000	0.492537			
ePOU_nocontrol_ChIP_peaks_unique-2433	chr6	50713570	50713770	+	1.79001	NA	Intergenic	Intergenic	-59225	NM_021892	60531	Mm.157158	NM_021892	ENSMUSG00000029831	Npvf	Rfrp	neuropeptide VF precursor	protein-coding	0.015000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-1805	chr2	146594083	146594283	+	1.79001	NA	Intergenic	Intergenic	51252	NR_040502	74065	Mm.399508	NR_040502	ENSMUSG00000085796	4933406D12Rik	-	RIKEN cDNA 4933406D12 gene	ncRNA	0.005000	0.412935			58(TTTTTCCTTTGCTAAT,+,0.00)
merged_common-162	chr3	57843926	57844126	+	1.79001	NA	intron (NM_019410, intron 2 of 2)	intron (NM_019410, intron 2 of 2)	3731	NM_019410	18645	Mm.271744	NM_019410	ENSMUSG00000027805	Pfn2	Pfn	profilin 2	protein-coding	0.000000	0.343284			38(TTTTTGTCATGCATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2974	chrX	8790369	8790569	+	1.79001	NA	Intergenic	RLTR13B4|LTR|ERVK	-13222	NM_199319	387586	Mm.227643	NM_199319	ENSMUSG00000071816	Ssxb5	-	synovial sarcoma, X member B5	protein-coding	0.000000	0.373134			
merged_common-189	chr5	12503324	12503524	+	1.79001	NA	intron (NM_028882, intron 5 of 17)	intron (NM_028882, intron 5 of 17)	120258	NM_028882	108151	Mm.89313	NM_028882	ENSMUSG00000040254	Sema3d	4631426B19Rik	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D	protein-coding	0.015000	0.452736			67(TATTTTTCTTGGAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1275	chr16	77250543	77250743	+	1.79001	NA	Intergenic	Intergenic	-78685	NR_015543	77994	Mm.394688	NR_015543	ENSMUSG00000090386	Mir99ahg	2810055G20Rik|D730043B02Rik	Mir99a and Mirlet7c-1 host gene (non-protein coding)	ncRNA	0.005000	0.298507	-40(GATTCATAATTCATC,+,0.00),-40(GATTCATAATTCATC,-,0.00)		30(CTTCTGTTATTTAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2682	chr7	143548372	143548572	+	1.79001	NA	intron (NM_008672, intron 1 of 15)	CpG	356	NM_001285490	17955	Mm.294625	NM_008672	ENSMUSG00000059119	Nap1l4	2810410H14Rik|AI316776|D7Wsu30e|Nap2	nucleosome assembly protein 1-like 4	protein-coding	0.075000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-2395	chr6	17748905	17749105	+	1.77431	NA	promoter-TSS (NM_022332)	promoter-TSS (NM_022332)	-165	NM_022332	64213	Mm.12051	NM_022332	ENSMUSG00000029534	St7	9430001H04Rik|Fam4a2|HELG|RAY1|SEN4|TSG7	suppression of tumorigenicity 7	protein-coding	0.015000	0.427861			
merged_common-145	chr2	91070277	91070477	+	1.77431	NA	promoter-TSS (NM_026721)	promoter-TSS (NM_026721)	-62	NR_110981	68427	Mm.192375	NM_026721	ENSMUSG00000002105	Slc39a13	1100001L14Rik|AA387663|ZIP-13|ZIP13	solute carrier family 39 (metal ion transporter), member 13	protein-coding	0.140000	0.736318			
ePOU_nocontrol_ChIP_peaks_unique-904	chr13	111232487	111232687	+	1.77431	NA	Intergenic	Intergenic	-3156	NR_045908	73129	Mm.417826	NR_045908	ENSMUSG00000114824	3110015C05Rik	-	RIKEN cDNA 3110015C05 gene	ncRNA	0.020000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-2287	chr5	89786794	89786994	+	1.77431	NA	intron (NM_001081401, intron 3 of 21)	intron (NM_001081401, intron 3 of 21)	96440	NM_001081401	330119	Mm.133062	NM_177872	ENSMUSG00000043635	Adamts3	1100001H14Rik|6330442E02Rik	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3	protein-coding	0.005000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-2904	chr9	70729567	70729767	+	1.77431	NA	intron (NM_007399, intron 4 of 15)	intron (NM_007399, intron 4 of 15)	50685	NM_007399	11487	Mm.3037	NM_007399	ENSMUSG00000054693	Adam10	1700031C13Rik|MADM|kuz|kuzbanian	a disintegrin and metallopeptidase domain 10	protein-coding	0.010000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-2104	chr4	77331747	77331947	+	1.77431	NA	intron (NR_160919, intron 6 of 39)	intron (NR_160919, intron 6 of 39)	879895	NM_011211	19266	Mm.184021	NM_011211	ENSMUSG00000028399	Ptprd	1110002J03Rik|3000002J10Rik|B230219D21Rik|R-PTP-delta	protein tyrosine phosphatase, receptor type, D	protein-coding	0.010000	0.283582	-16(ATTGAATAATTCATA,+,0.00),-16(ATTGAATAATTCATA,-,0.00)		61(AATACAATGACAAAGA,-,0.00)
merged_common-135	chr2	26409111	26409311	+	1.74898	NA	promoter-TSS (NM_033134)	promoter-TSS (NM_033134)	8	NR_110957	64436	Mm.330070	NM_033134	ENSMUSG00000026925	Inpp5e	1200002L24Rik|72kDa|mKIAA0123	inositol polyphosphate-5-phosphatase E	protein-coding	0.100000	0.711443			
merged_common-193	chr5	67633425	67633625	+	1.74898	NA	intron (NM_001038999, intron 33 of 36)	intron (NM_001038999, intron 33 of 36)	25642	NM_001033415	330096	Mm.442747	NM_001033415	ENSMUSG00000050010	Shisa3	D830007B15Rik	shisa family member 3	protein-coding	0.015000	0.457711			-14(CCATTGTCATGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1213	chr16	31037373	31037573	+	1.71642	NA	intron (NM_198626, intron 2 of 3)	intron (NM_198626, intron 2 of 3)	43959	NM_198626	268880	Mm.286693	NM_198626	ENSMUSG00000047434	Xxylt1	AI480653	xyloside xylosyltransferase 1	protein-coding	0.000000	0.402985			59(CTATTGTAATGCTAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-14	chr1	17145491	17145691	+	1.71642	NA	intron (NM_010267, intron 1 of 5)	CpG	218	NM_010267	14545	Mm.18218	NM_010267	ENSMUSG00000025777	Gdap1	-	ganglioside-induced differentiation-associated-protein 1	protein-coding	0.065000	0.651741			
Oct4_nocontrol_ChIP_peaks_unique-57	chr2	100839859	100840059	+	1.71642	NA	Intergenic	Intergenic	781087	NM_001362687	68170	Mm.31263	NM_026592	ENSMUSG00000027165	B230118H07Rik	NWC	RIKEN cDNA B230118H07 gene	protein-coding	0.005000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-1393	chr17	80834662	80834862	+	1.71642	NA	Intergenic	L1MB2|LINE|L1	-62031	NR_131127	320784	Mm.474182	NR_131127	ENSMUSG00000112121	C230072F16Rik	-	RIKEN cDNA C230072F16 gene	ncRNA	0.005000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-132	chr1	126817672	126817872	+	1.71642	NA	intron (NM_001081756, intron 1 of 16)	intron (NM_001081756, intron 1 of 16)	12860	NM_001081756	210356	Mm.377234	NM_172484	ENSMUSG00000049690	Nckap5	8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5	NCK-associated protein 5	protein-coding	0.020000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-423	chr11	11872494	11872694	+	1.71642	NA	intron (NR_045178, intron 2 of 3)	intron (NR_045178, intron 2 of 3)	4471	NR_045178	73321	Mm.443306	NR_045178	ENSMUSG00000086391	1700042O10Rik	-	RIKEN cDNA 1700042O10 gene	ncRNA	0.010000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-695	chr12	59013116	59013316	+	1.71642	NA	promoter-TSS (NM_025656)	promoter-TSS (NM_025656)	-175	NM_025656	66603	Mm.35353	NM_025656	ENSMUSG00000060121	Gemin2	Sip1|gemin-2	gem nuclear organelle associated protein 2	protein-coding	0.035000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-1226	chr16	33698122	33698322	+	1.71642	NA	intron (NM_175256, intron 1 of 14)	intron (NM_175256, intron 1 of 14)	13756	NM_175256	77446	Mm.245741	NM_172934	ENSMUSG00000075254	Heg1	4632417D23Rik|5530401I02Rik|9530025L16Rik|BC038614|Gm629	heart development protein with EGF-like domains 1	protein-coding	0.010000	0.502488			-85(GTTTTGCCTTGCAAAC,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2516	chr6	124741072	124741272	+	1.71642	NA	promoter-TSS (NM_013535)	promoter-TSS (NM_013535)	-103	NM_013535	14790	Mm.439877	NM_013535	ENSMUSG00000072772	Grcc10	2310033H05Rik|C10	gene rich cluster, C10 gene	protein-coding	0.055000	0.517413			
ePOU_nocontrol_ChIP_peaks_unique-2626	chr7	94379222	94379422	+	1.71642	NA	Intergenic	Intergenic	-1195146	NM_001358087	100040298	Mm.260904	NM_001358087		Gm15501	EyeLinc5	predicted pseudogene 15501	protein-coding	0.005000	0.308458			51(CTTTTGTTATACATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1414	chr17	90636991	90637191	+	1.71642	NA	intron (NM_001346957, intron 7 of 18)	intron (NM_001346957, intron 7 of 18)	156385	NR_136930	102634634		NR_136930		Gm20491	-	enolase 1, alpha non-neuron pseudogene	pseudo	0.000000	0.258706			
ePOU_nocontrol_ChIP_peaks_unique-1256	chr16	58663132	58663332	+	1.71642	NA	Intergenic	Intergenic	-6976	NM_007757	12892	Mm.291519	NM_007757	ENSMUSG00000022742	Cpox	CPX|Cpo|HCP|cac|nct	coproporphyrinogen oxidase	protein-coding	0.010000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-1954	chr3	89913123	89913323	+	1.71642	NA	promoter-TSS (NM_010559)	promoter-TSS (NM_010559)	-27	NM_001310676	16194	Mm.2856	NM_010559	ENSMUSG00000027947	Il6ra	CD126|IL-6R|IL-6R-alpha|IL-6RA|Il6r	interleukin 6 receptor, alpha	protein-coding	0.100000	0.656716			
merged_common-243	chrX	142995571	142995771	+	1.71642	NA	Intergenic	Intergenic	-28945	NM_019496	56068	Mm.143724	NM_019496	ENSMUSG00000042225	Ammecr1	6230420G18Rik	Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1	protein-coding	0.005000	0.308458		51(CATGCATATGAATA,+,0.00),51(CATGCATATGAATA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2348	chr5	135064019	135064219	+	1.71642	NA	promoter-TSS (NM_025362)	promoter-TSS (NM_025362)	-87	NM_025362	66114	Mm.178012	NM_025362	ENSMUSG00000061118	Dnajc30	1300007M11Rik|Wbscr18	DnaJ heat shock protein family (Hsp40) member C30	protein-coding	0.105000	0.616915			
ePOU_nocontrol_ChIP_peaks_unique-2721	chr8	46680803	46681003	+	1.71642	NA	Intergenic	Intergenic	58612	NR_045750	100503498	Mm.187358	NR_045750	ENSMUSG00000097534	Gm16675	-	predicted gene, 16675	ncRNA	0.005000	0.373134			82(GTTTTGTTATTGAAAC,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1970	chr3	102717899	102718099	+	1.71642	NA	Intergenic	Intergenic	-16771	NM_027533	70747	Mm.27469	NM_027533	ENSMUSG00000027858	Tspan2	6330415F13Rik|B230119D02Rik|tspan-2	tetraspanin 2	protein-coding	0.000000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-2214	chr5	27343437	27343637	+	1.71642	NA	intron (NM_001136060, intron 1 of 25)	RLTR13D3A1|LTR|ERVK	81602	NM_001136060	13483	Mm.42078	NM_010075	ENSMUSG00000061576	Dpp6	B930011P16Rik|D5Buc3|D5Buc4|D5Buc5|DPP VI|Dpp-6|Gm1377|In(5)6H-p|Peplb|Rw	dipeptidylpeptidase 6	protein-coding	0.005000	0.402985			-61(ATGTAAATAAGAAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1631	chr2	15548422	15548622	+	1.71642	NA	intron (NM_001310455, intron 1 of 38)	intron (NM_001310455, intron 1 of 38)	22043	NM_001310455	102635496		NM_001310455	ENSMUSG00000075520	Malrd1	Diet1|Gm13318|Gm13364	MAM and LDL receptor class A domain containing 1	protein-coding	0.010000	0.283582			
ePOU_nocontrol_ChIP_peaks_unique-331	chr10	67912380	67912580	+	1.71642	NA	5' UTR (NM_178679, exon 1 of 5)	5' UTR (NM_178679, exon 1 of 5)	182	NM_178679	216049	Mm.268346	NM_178679	ENSMUSG00000037855	Zfp365	AI839779|AV340892|DBZ|Su48|Znf365|talanin	zinc finger protein 365	protein-coding	0.145000	0.771144			
Oct4_nocontrol_ChIP_peaks_unique-61	chr3	102372295	102372495	+	1.71642	NA	Intergenic	L1MD1|LINE|L1	-97524	NM_001112698	18049	Mm.1259	NM_013609	ENSMUSG00000027859	Ngf	Ngfb|beta-NGF	nerve growth factor	protein-coding	0.015000	0.477612			-25(ATTAACATCACAGAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2381	chr5	149678322	149678522	+	1.71642	NA	intron (NM_001081204, intron 1 of 14)	CpG	192	NM_001081204	381694	Mm.45060	NM_001081204	ENSMUSG00000051950	B3glct	B3galtl|Gm1057|beta3Glc-T	beta-3-glucosyltransferase	protein-coding	0.150000	0.810945			
ePOU_nocontrol_ChIP_peaks_unique-355	chr10	81037333	81037533	+	1.71642	NA	promoter-TSS (NM_134135)	promoter-TSS (NM_134135)	-118	NM_134135	106947	Mm.5353	NM_134135	ENSMUSG00000046822	Slc39a3	AI845814|ZIP-3|Zip3	solute carrier family 39 (zinc transporter), member 3	protein-coding	0.040000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-1904	chr3	60227655	60227855	+	1.71642	NA	Intergenic	Intergenic	145886	NM_032400	84112	Mm.125110	NM_032400	ENSMUSG00000027762	Sucnr1	Gpr91	succinate receptor 1	protein-coding	0.005000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-1312	chr17	13668700	13668900	+	1.71642	NA	Intergenic	Intergenic	-91741	NR_151731	17356	Mm.59167	NM_010806	ENSMUSG00000068036	Afdn	5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|Mllt4|S-afadin	afadin, adherens junction formation factor	protein-coding	0.020000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-627	chr11	119942898	119943098	+	1.71642	NA	promoter-TSS (NM_130862)	promoter-TSS (NM_130862)	-94	NM_001037754	108100	Mm.197534	NM_130862	ENSMUSG00000025372	Baiap2	IRSp53|R75030	brain-specific angiogenesis inhibitor 1-associated protein 2	protein-coding	0.120000	0.726368			
ePOU_nocontrol_ChIP_peaks_unique-2811	chr8	120113869	120114069	+	1.71642	NA	promoter-TSS (NM_001163761)	promoter-TSS (NM_001163761)	-183	NM_172286	234797	Mm.101958	NM_172286	ENSMUSG00000031824	6430548M08Rik	AW049007|Kiaa0513|mKIAA0513	RIKEN cDNA 6430548M08 gene	protein-coding	0.100000	0.671642			
ePOU_nocontrol_ChIP_peaks_unique-1611	chr19	61199734	61199934	+	1.71642	NA	Intergenic	Intergenic	-23525	NM_001177513	633057	Mm.426097	NM_001177513	ENSMUSG00000094649	Gm7102	EG633057	predicted gene 7102	protein-coding	0.065000	0.557214			
ePOU_nocontrol_ChIP_peaks_unique-1536	chr19	12143688	12143888	+	1.71642	NA	intron (NR_030566, intron 2 of 3)	intron (NR_030566, intron 2 of 3)	-23114	NM_146682	258677	Mm.261576	NM_146682	ENSMUSG00000067522	Olfr76	MOR215-3|V5	olfactory receptor 76	protein-coding	0.010000	0.452736	56(AATGCATTATTTATA,+,0.00),56(AATGCATTATTTATA,-,0.00)		
Oct4_nocontrol_ChIP_peaks_unique-30	chr14	60265104	60265304	+	1.71642	NA	promoter-TSS (NM_144843)	promoter-TSS (NM_144843)	-1	NM_144843	219135	Mm.247007	NM_144843	ENSMUSG00000021987	Mtmr6	4022440C11Rik|AI428804|AU041072	myotubularin related protein 6	protein-coding	0.080000	0.631841			
ePOU_nocontrol_ChIP_peaks_unique-814	chr13	30973907	30974107	+	1.71642	NA	promoter-TSS (NM_025588)	promoter-TSS (NM_025588)	40	NM_025588	66482	Mm.293510	NM_025588	ENSMUSG00000021357	Exoc2	2410030I24Rik|AI648199|Sec5|Sec5l1	exocyst complex component 2	protein-coding	0.135000	0.736318			
ePOU_nocontrol_ChIP_peaks_unique-2633	chr7	99535579	99535779	+	1.71642	NA	5' UTR (NM_177231, exon 1 of 16)	5' UTR (NM_177231, exon 1 of 16)	193	NM_177231	109689	Mm.260193	NM_177231	ENSMUSG00000018909	Arrb1	1200006I17Rik|AW208571|G430100A01Rik	arrestin, beta 1	protein-coding	0.160000	0.800995			
merged_common-9	chr1	106176911	106177111	+	1.71642	NA	intron (NM_133821, intron 1 of 16)	intron (NM_133821, intron 1 of 16)	5142	NM_133821	98432	Mm.24115	NM_133821	ENSMUSG00000044340	Phlpp1	AI836256|Phlpp|Plekhe1|SCOP|mKIAA0606	PH domain and leucine rich repeat protein phosphatase 1	protein-coding	0.005000	0.477612			
ePOU_nocontrol_ChIP_peaks_unique-2656	chr7	122101743	122101943	+	1.71642	NA	promoter-TSS (NM_001360743)	promoter-TSS (NM_001360743)	5	NR_153798	70316	Mm.3014	NM_028177	ENSMUSG00000030869	Ndufab1	2210401F17Rik|2310039H15Rik|2610003B19Rik|8kDa|9130423F15Rik|ACP|CI-SDAP|SDAP	NADH:ubiquinone oxidoreductase subunit AB1	protein-coding	0.165000	0.761194			
ePOU_nocontrol_ChIP_peaks_unique-568	chr11	95336430	95336630	+	1.71642	NA	promoter-TSS (NM_172543)	promoter-TSS (NM_172543)	-488	NM_172543	215512	Mm.262113	NM_172543	ENSMUSG00000038893	Fam117a	5730593F17Rik|AW548096	family with sequence similarity 117, member A	protein-coding	0.005000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-2471	chr6	83927534	83927734	+	1.71642	NA	intron (NM_008717, intron 1 of 26)	intron (NM_008717, intron 1 of 26)	13281	NM_008717	18139	Mm.132392	NM_008717	ENSMUSG00000030016	Zfp638	AI323587|Np220|Zfml|Znf638|mNP220	zinc finger protein 638	protein-coding	0.005000	0.383085			-74(TTTTAAATAACAAAGT,-,0.00)
Oct4_nocontrol_ChIP_peaks_unique-60	chr3	52105196	52105396	+	1.71642	NA	promoter-TSS (NM_001004176)	promoter-TSS (NM_001004176)	-290	NM_001004176	433586	Mm.234972	NM_001004176	ENSMUSG00000061143	Maml3	AV234550|BC049812|Mam-2|mKIAA1816	mastermind like transcriptional coactivator 3	protein-coding	0.085000	0.601990			
ePOU_nocontrol_ChIP_peaks_unique-412	chr11	4594709	4594909	+	1.71642	NA	promoter-TSS (NM_028860)	promoter-TSS (NM_028860)	6	NM_028860	74302	Mm.425669	NM_028860	ENSMUSG00000034354	Mtmr3	1700092A20Rik|AI255150|AW557713|FYVE-DSP1|ZFYVE10|mKIAA0371	myotubularin related protein 3	protein-coding	0.160000	0.766169			
ePOU_nocontrol_ChIP_peaks_unique-699	chr12	71817252	71817452	+	1.71642	NA	Intergenic	Intergenic	-13716	NM_026102	208846	Mm.87417	NM_026102	ENSMUSG00000034574	Daam1	-	dishevelled associated activator of morphogenesis 1	protein-coding	0.010000	0.308458			-37(ATTATCAAAACAAGGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-470	chr11	43031399	43031599	+	1.71642	NA	Intergenic	L1MA4|LINE|L1	-118378	NM_176999	319767	Mm.252339	NM_176999	ENSMUSG00000055415	Atp10b	5930426O13Rik|9030605H24Rik	ATPase, class V, type 10B	protein-coding	0.000000	0.318408			
ePOU_nocontrol_ChIP_peaks_unique-2269	chr5	73171932	73172132	+	1.71642	NA	intron (NM_028194, intron 3 of 62)	intron (NM_028194, intron 3 of 62)	84586	NM_028194	72313	Mm.260594	NM_028194	ENSMUSG00000070733	Fryl	2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826	FRY like transcription coactivator	protein-coding	0.010000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-594	chr11	104289382	104289582	+	1.71642	NA	intron (NM_001038609, intron 3 of 11)	intron (NM_001038609, intron 3 of 11)	58046	NM_001038609	17762	Mm.1287	NM_010838	ENSMUSG00000018411	Mapt	AI413597|AW045860|Mtapt|Tau	microtubule-associated protein tau	protein-coding	0.005000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-1424	chr18	12370200	12370400	+	1.71642	NA	intron (NM_010680, intron 2 of 74)	L1MB3|LINE|L1	36366	NM_010680	16774	Mm.42012	NM_010680	ENSMUSG00000024421	Lama3	Lama3B|[a]3B	laminin, alpha 3	protein-coding	0.000000	0.462687			-17(TCCTTATTATGTAAAG,+,0.00)
merged_common-71	chr13	16769541	16769741	+	1.71642	NA	Intergenic	Intergenic	-746218	NR_155430	100503142	Mm.359204	NR_155430		B230303A05Rik	B230303A05|EG328191	U1 small nuclear ribonucleoprotein 1C pseudogene	pseudo	0.010000	0.432836			26(CTTTTGTAATGCAATT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1715	chr2	79379054	79379254	+	1.71642	NA	intron (NM_001048176, intron 2 of 12)	intron (NM_001048176, intron 2 of 12)	49834	NM_001048176	228094	Mm.440704	NM_001033295	ENSMUSG00000075256	Cerkl	Gm1958|Rp26	ceramide kinase-like	protein-coding	0.015000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-2174	chr4	141184145	141184345	+	1.71642	NA	intron (NM_172518, intron 4 of 9)	intron (NM_172518, intron 4 of 9)	-29711	NM_001081174	76166	Mm.271064	NM_001081174	ENSMUSG00000073733	Cplane2	6330545A04Rik|Gm723|Rsg1|b2b2804Clo|b2b2827Clo	ciliogenesis and planar polarity effector 2	protein-coding	0.005000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-2565	chr7	30169799	30169999	+	1.71642	NA	promoter-TSS (NM_011980)	promoter-TSS (NM_011980)	24	NR_157376	330503	Mm.434058	NM_001033540		Gm5113	B430201F14|EG330503	predicted gene 5113	ncRNA	0.030000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-1837	chr2	173832818	173833018	+	1.71642	NA	Intergenic	Intergenic	95347	NM_019806	56491	Mm.260456	NM_019806	ENSMUSG00000054455	Vapb	AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b	vesicle-associated membrane protein, associated protein B and C	protein-coding	0.015000	0.368159			-53(ATTTGCAATGGAAAAA,-,0.00),-26(TTTTTTTTTTTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-949	chr14	33293738	33293938	+	1.71642	NA	intron (NM_153800, intron 3 of 10)	B4|SINE|B4	77015	NM_153800	239027	Mm.318350	NM_153800	ENSMUSG00000063506	Arhgap22	B230341L19Rik|RHOGAP2|p68RacGAP	Rho GTPase activating protein 22	protein-coding	0.010000	0.417910			72(CAATTTTTATTCAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1984	chr3	110076061	110076261	+	1.71642	NA	intron (NM_030699, intron 2 of 7)	MTEb-int|LTR|ERVL-MaLR	67311	NM_001163350	80883	Mm.39262	NM_030699	ENSMUSG00000059857	Ntng1	A930010C08Rik|AI853992|Lmnt1	netrin G1	protein-coding	0.000000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-1047	chr14	121868920	121869120	+	1.71642	NA	Intergenic	Intergenic	9250	NR_131002	78312	Mm.188743	NR_130999	ENSMUSG00000102112	1810041H14Rik	-	RIKEN cDNA 1810041H14 gene	ncRNA	0.010000	0.517413			
Oct4_nocontrol_ChIP_peaks_unique-59	chr2	146302351	146302551	+	1.71642	NA	intron (NM_001033348, intron 38 of 40)	intron (NM_001033348, intron 38 of 40)	43165	NR_040619	77806	Mm.392819	NR_040619	ENSMUSG00000085958	A930019D19Rik	-	RIKEN cDNA A930019D19 gene	ncRNA	0.020000	0.497512		53(GATGCAAATGCATC,+,0.00),53(GATGCAAATGCATC,-,0.00)	46(TAATTGAGATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1242	chr16	43400958	43401158	+	1.71642	NA	intron (NM_181058, intron 2 of 6)	intron (NM_181058, intron 2 of 6)	19138	NR_046026	626693	Mm.447083	NR_046026	ENSMUSG00000085499	Gm15713	-	predicted gene 15713	ncRNA	0.005000	0.318408			-16(CTTTAAATTACAAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1958	chr3	95648181	95648381	+	1.71642	NA	Intergenic	Lx8|LINE|L1	-10440	NM_008562	17210	Mm.1639	NM_008562	ENSMUSG00000038612	Mcl1	AW556805|Mcl-1	myeloid cell leukemia sequence 1	protein-coding	0.015000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-1235	chr16	37582017	37582217	+	1.71642	NA	intron (NM_013547, intron 1 of 13)	intron (NM_013547, intron 1 of 13)	1964	NR_027778	15233	Mm.157442	NM_013547	ENSMUSG00000022821	Hgd	Hgo|aku	homogentisate 1, 2-dioxygenase	protein-coding	0.010000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-1461	chr18	52262622	52262822	+	1.71642	NA	Intergenic	Intergenic	-68814	NM_026286	67634	Mm.179144	NM_026286	ENSMUSG00000024510	Ftmt	4930447C24Rik|FerH|Fth3|MtF	ferritin mitochondrial	protein-coding	0.005000	0.308458			
ePOU_nocontrol_ChIP_peaks_unique-2821	chr8	126945999	126946199	+	1.71642	NA	promoter-TSS (NM_024214)	promoter-TSS (NM_024214)	-178	NM_024214	67952	Mm.6932	NM_024214	ENSMUSG00000093904	Tomm20	1810060K07Rik|BB284719|Gm19268|MAS20|MOM19|TOM20|mKIAA0016	translocase of outer mitochondrial membrane 20	protein-coding	0.035000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-1408	chr17	86962977	86963177	+	1.71642	NA	promoter-TSS (NM_145491)	promoter-TSS (NM_145491)	-34	NM_145491	104215	Mm.826	NM_145491	ENSMUSG00000024143	Rhoq	Arhq|TC10A|Tc10	ras homolog family member Q	protein-coding	0.110000	0.776119			
ePOU_nocontrol_ChIP_peaks_unique-2283	chr5	81040228	81040428	+	1.71642	NA	intron (NM_198702, intron 1 of 27)	intron (NM_198702, intron 1 of 27)	18735	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Adgrl3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|Lphn3|mKIAA0768	adhesion G protein-coupled receptor L3	protein-coding	0.000000	0.293532			
ePOU_nocontrol_ChIP_peaks_unique-524	chr11	72441120	72441320	+	1.71642	NA	promoter-TSS (NM_016776)	promoter-TSS (NM_016776)	-107	NM_016776	18432	Mm.147946	NM_016776	ENSMUSG00000040463	Mybbp1a	AL024407|AU019902|P160|p160MBP|p67MBP	MYB binding protein (P160) 1a	protein-coding	0.065000	0.567164			
ePOU_nocontrol_ChIP_peaks_unique-182	chr1	167349830	167350030	+	1.71642	NA	promoter-TSS (NM_019993)	promoter-TSS (NM_019993)	-61	NM_019993	56752	Mm.292539	NM_019993	ENSMUSG00000026687	Aldh9a1	AA139417|Abaldh|ESTM40|TMABA-DH|Tmabadh	aldehyde dehydrogenase 9, subfamily A1	protein-coding	0.030000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-2239	chr5	45136788	45136988	+	1.71642	NA	intron (NR_131933, intron 5 of 5)	intron (NR_131933, intron 5 of 5)	170687	NR_073013	75783	Mm.218472	NR_073013	ENSMUSG00000062496	4930431F12Rik	-	RIKEN cDNA 4930431F12 gene	ncRNA	0.010000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-691	chr12	55007720	55007920	+	1.71642	NA	Intergenic	Intergenic	-21484	NM_013815	217578	Mm.479583	NM_013815	ENSMUSG00000035021	Baz1a	Acf1|B930060C03|BC065123|Gtl5|Wcrf180|cbp146	bromodomain adjacent to zinc finger domain 1A	protein-coding	0.010000	0.358209			-72(TTATTGTTATTTAAAT,+,0.00),-52(TTATTTTGTTTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-944	chr14	30015108	30015308	+	1.71642	NA	intron (NM_001136240, intron 1 of 7)	intron (NM_001136240, intron 1 of 7)	-6095	NM_172264	218865	Mm.259916	NM_172264	ENSMUSG00000015970	Chdh	AU041472|D630034H06Rik	choline dehydrogenase	protein-coding	0.000000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-296	chr10	39107047	39107247	+	1.71642	NA	intron (NM_010681, intron 37 of 37)	ORR1C2|LTR|ERVL-MaLR	26753	NM_001359442	66337	Mm.45187	NM_183254	ENSMUSG00000051736	Fam229b	1700025K23Rik	family with sequence similarity 229, member B	protein-coding	0.005000	0.477612			-91(GTTTGAATGAGAATGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-295	chr10	39005651	39005851	+	1.71642	NA	intron (NM_010681, intron 2 of 37)	intron (NM_010681, intron 2 of 37)	40236	NM_010681	16775	Mm.258065	NM_010681	ENSMUSG00000019846	Lama4	-	laminin, alpha 4	protein-coding	0.015000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-1201	chr16	20535326	20535526	+	1.71642	NA	promoter-TSS (NM_001302970)	promoter-TSS (NM_001302970)	-54	NM_001302970	11773	Mm.18946	NM_009679	ENSMUSG00000022841	Ap2m1	-	adaptor-related protein complex 2, mu 1 subunit	protein-coding	0.080000	0.611940			
ePOU_nocontrol_ChIP_peaks_unique-1948	chr3	87525560	87525760	+	1.71642	NA	promoter-TSS (NM_001359750)	promoter-TSS (NM_001359750)	82	NM_012051	27049	Mm.219460	NM_012051	ENSMUSG00000003382	Etv3	AI414410|METS|Pe1	ets variant 3	protein-coding	0.150000	0.736318			
ePOU_nocontrol_ChIP_peaks_unique-870	chr13	88945321	88945521	+	1.71642	NA	intron (NM_010103, intron 2 of 9)	intron (NM_010103, intron 2 of 9)	123949	NM_010103	13612	Mm.125580	NM_010103	ENSMUSG00000034488	Edil3	Del-1|Del1|Sox2-cre|Sox2Cre|Tg(Sox2-cre)1Amc	EGF-like repeats and discoidin I-like domains 3	protein-coding	0.005000	0.248756	-88(TCTAAATTATTCATT,+,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1829	chr2	166905987	166906187	+	1.71642	NA	promoter-TSS (NM_023565)	promoter-TSS (NM_023565)	-9	NM_023565	110750	Mm.22417	NM_023565	ENSMUSG00000002718	Cse1l	2610100P18Rik|AA407533|Capts|Cas|Xpo2	chromosome segregation 1-like (S. cerevisiae)	protein-coding	0.085000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-2898	chr9	66236624	66236824	+	1.71642	NA	intron (NM_010019, intron 4 of 11)	MIRb|SINE|MIR	78498	NM_010019	13143	Mm.304472	NM_010019	ENSMUSG00000032380	Dapk2	-	death-associated protein kinase 2	protein-coding	0.005000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-2902	chr9	67496473	67496673	+	1.71642	NA	intron (NM_001081242, intron 1 of 57)	intron (NM_001081242, intron 1 of 57)	63130	NM_001081242	70549	Mm.33645	NM_027458	ENSMUSG00000052698	Tln2	5730421P04Rik|AI507121|AI787438|AL118320|mKIAA0320	talin 2	protein-coding	0.000000	0.442786			1(ATTTGCAAAAGATTTG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-457	chr11	37741670	37741870	+	1.71642	NA	Intergenic	Intergenic	82781	NR_131154	100039148	Mm.120467	NR_131154	ENSMUSG00000087388	Gm12128	-	predicted gene 12128	ncRNA	0.005000	0.388060		30(CATGAATTTGCATG,+,0.00),30(CATGAATTTGCATG,-,0.00)	35(ATTTGCATGACAGTGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2962	chr9	121314149	121314349	+	1.71642	NA	intron (NM_001357972, intron 1 of 13)	intron (NM_001357972, intron 1 of 13)	16747	NM_001357972	67095	Mm.491112	NM_175114	ENSMUSG00000032536	Trak1	2310001H13Rik|AI413908|AI467545|hyrt|mKIAA1042	trafficking protein, kinesin binding 1	protein-coding	0.045000	0.597015			
Oct4_nocontrol_ChIP_peaks_unique-12	chr10	74547322	74547522	+	1.71642	NA	intron (NM_001142743, intron 25 of 34)	intron (NM_001142743, intron 25 of 34)	-419755	NM_010311	14687	Mm.32595	NM_010311	ENSMUSG00000040009	Gnaz	AI847979|Gz	guanine nucleotide binding protein, alpha z subunit	protein-coding	0.000000	0.338308	-8(CATACATAATTTATA,+,0.00),-8(CATACATAATTTATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1017	chr14	83008406	83008606	+	1.71642	NA	Intergenic	Intergenic	1066784	NR_153783	102635012	Mm.399509	NR_153783	ENSMUSG00000115043	Gm32455	-	predicted gene, 32455	ncRNA	0.005000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-399	chr10	117676485	117676685	+	1.71642	NA	intron (NM_027468, intron 7 of 8)	intron (NM_027468, intron 7 of 8)	34173	NM_001288586	17246	Mm.22670	NM_010786	ENSMUSG00000020184	Mdm2	1700007J15Rik|AA415488|Mdm-2	transformed mouse 3T3 cell double minute 2	protein-coding	0.025000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-640	chr12	5443017	5443217	+	1.71642	NA	Intergenic	Intergenic	67397	NR_015579	72669	Mm.10434	NM_028318		2810032G03Rik	AI461720	RIKEN cDNA 2810032G03 gene	ncRNA	0.010000	0.467662			-78(GTTTTGCATTGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1124	chr15	70499034	70499234	+	1.71642	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	574901	NR_045071	100503580	Mm.404646	NR_045071	ENSMUSG00000116483	Gm19782	-	predicted gene, 19782	ncRNA	0.010000	0.368159		42(CATGTATATGTATG,+,0.00),42(CATGTATATGTATG,-,0.00)	35(GCATATTCATGTATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1261	chr16	64595407	64595607	+	1.71642	NA	intron (NM_173861, intron 1 of 2)	intron (NM_173861, intron 1 of 2)	6824	NM_001368721	224291	Mm.246580	NM_173861	ENSMUSG00000068167	Csnka2ip	Ckt2	casein kinase 2, alpha prime interacting protein	protein-coding	0.000000	0.303483			55(TTTCTGTTATGCTGAT,+,0.00),84(GTTTGCAAAACAGTAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1297	chr16	96127836	96128036	+	1.71642	NA	promoter-TSS (NM_008251)	promoter-TSS (NM_008251)	-211	NM_008251	15312	Mm.2756	NM_008251	ENSMUSG00000040681	Hmgn1	HMG-14|Hmg14	high mobility group nucleosomal binding domain 1	protein-coding	0.115000	0.721393			
ePOU_nocontrol_ChIP_peaks_unique-2556	chr7	24459876	24460076	+	1.71642	NA	Intergenic	Intergenic	-2507	NM_011113	18793	Mm.1359	NM_011113	ENSMUSG00000046223	Plaur	Cd87|u-PAR|uPAR	plasminogen activator, urokinase receptor	protein-coding	0.000000	0.537313			32(ATCAGCATGACAAACA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-857	chr13	77490743	77490943	+	1.71642	NA	intron (NM_001145676, intron 19 of 19)	intron (NM_001145676, intron 19 of 19)	-217847	NM_138312	68675	Mm.343005	NM_138312	ENSMUSG00000064138	Fam172a	1110033M05Rik|2610318O14Rik|53-E6|9430037D06Rik|AF064782|pEN87	family with sequence similarity 172, member A	protein-coding	0.015000	0.328358			-14(CCTTTGTCATGCAAAA,+,0.00),1(ATATGCAACACACAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-591	chr11	103412592	103412792	+	1.71642	NA	promoter-TSS (NM_183034)	promoter-TSS (NM_183034)	13	NM_183034	353047	Mm.383308	NM_183034	ENSMUSG00000034247	Plekhm1	AP162|B2|BC038943|D330036J23Rik	pleckstrin homology domain containing, family M (with RUN domain) member 1	protein-coding	0.110000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-36	chr1	34413428	34413628	+	1.71642	NA	Intergenic	B1_Mur2|SINE|Alu	19671	NR_039562	100628580		NR_039562	ENSMUSG00000092852	Mir5103	mir-5103|mmu-mir-5103|mu-mir-5103	microRNA 5103	ncRNA	0.000000	0.472637			
ePOU_nocontrol_ChIP_peaks_unique-2351	chr5	135529455	135529655	+	1.71642	NA	intron (NM_146001, intron 1 of 30)	intron (NM_146001, intron 1 of 30)	15567	NM_146001	215114	Mm.280805	NM_146001	ENSMUSG00000039959	Hip1	2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113	huntingtin interacting protein 1	protein-coding	0.010000	0.442786		25(TATGCATATGCAAA,+,0.00),25(TATGCATATGCAAA,-,0.00)	18(CTAATGTTATGCATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1171	chr15	102399363	102399563	+	1.71642	NA	Intergenic	Intergenic	-6853	NM_013672	20683	Mm.4618	NM_013672	ENSMUSG00000001280	Sp1	1110003E12Rik|AA450830|AI845540|Sp1-1	trans-acting transcription factor 1	protein-coding	0.035000	0.537313			-75(TACTGGTCTTGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-625	chr11	119645149	119645349	+	1.71642	NA	intron (NM_001306081, intron 1 of 32)	intron (NM_001306081, intron 1 of 32)	42344	NM_028898	74370	Mm.209933	NM_028898	ENSMUSG00000025583	Rptor	4932417H02Rik|Rap|Raptor|mKIAA1303	regulatory associated protein of MTOR, complex 1	protein-coding	0.005000	0.462687			7(ATTAACATGACAATGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2460	chr6	72183151	72183351	+	1.71642	NA	Intergenic	MamRep1151|LTR?|LTR?	52326	NM_153778	71093	Mm.87449	NM_153778	ENSMUSG00000037621	Atoh8	4933425C05Rik|Hath6|Math6|bHLHa21|okadin	atonal bHLH transcription factor 8	protein-coding	0.005000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-228	chr1	189687820	189688020	+	1.71642	NA	intron (NM_001081363, intron 1 of 17)	CpG	166	NM_001081363	108000	Mm.129746	NM_001081363	ENSMUSG00000026605	Cenpf	6530404A22Rik|AI325968|CENF|Lek1|PRO1779|mitosin	centromere protein F	protein-coding	0.065000	0.671642			
ePOU_nocontrol_ChIP_peaks_unique-531	chr11	75622391	75622591	+	1.71642	NA	intron (NM_008850, intron 10 of 11)	intron (NM_008850, intron 10 of 11)	-8529	NM_008916	19062	Mm.1458	NM_008916	ENSMUSG00000006127	Inpp5k	C62|Pps|SKIP	inositol polyphosphate 5-phosphatase K	protein-coding	0.010000	0.402985			
Oct4_nocontrol_ChIP_peaks_unique-56	chr2	84969424	84969624	+	1.71642	NA	Intergenic	L1_Rod|LINE|L1	-10937	NM_008920	19074	Mm.142727	NM_008920	ENSMUSG00000027073	Prg2	EMBP|MBP|mMBP|mMBP-1	proteoglycan 2, bone marrow	protein-coding	0.000000	0.318408			
ePOU_nocontrol_ChIP_peaks_unique-195	chr1	172027233	172027433	+	1.71642	NA	promoter-TSS (NM_033509)	promoter-TSS (NM_033509)	-38	NM_033509	93840	Mm.36148	NM_033509	ENSMUSG00000026556	Vangl2	C530001F03Rik|Lootl|Lp|Lpp1|Ltap|Vang1l2|loop-tail|ska17|ska<m17Jus>|stbm|strabismus	VANGL planar cell polarity 2	protein-coding	0.075000	0.726368			
ePOU_nocontrol_ChIP_peaks_unique-2719	chr8	44979932	44980132	+	1.71642	NA	intron (NM_001081286, intron 1 of 25)	intron (NM_001081286, intron 1 of 25)	29824	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT atypical cadherin 1	protein-coding	0.040000	0.447761			
ePOU_nocontrol_ChIP_peaks_unique-2684	chr8	4952608	4952808	+	1.71642	NA	Intergenic	L1_Mus3|LINE|L1	152579	NM_011388	20494	Mm.3500	NM_011388	ENSMUSG00000023073	Slc10a2	9130221J18Rik|AI605518|ASBT|IBAT|ISBT	solute carrier family 10, member 2	protein-coding	0.005000	0.318408		-97(TATGAATATAGATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-180	chr1	165988929	165989129	+	1.71642	NA	intron (NM_011137, intron 1 of 16)	intron (NM_011137, intron 1 of 16)	13605	NM_198932	18986	Mm.245261	NM_011137	ENSMUSG00000026565	Pou2f1	2810482H01Rik|NF-A1|Oct-1|Oct1|Otf-1|Otf1	POU domain, class 2, transcription factor 1	protein-coding	0.000000	0.303483			
ePOU_nocontrol_ChIP_peaks_unique-476	chr11	47389390	47389590	+	1.71642	NA	Intergenic	Intergenic	-10165	NM_011891	24052	Mm.34175	NM_011891	ENSMUSG00000020354	Sgcd	35DAG|A530047J11Rik|AI504364|AW547581|SG-delta|delta-SG	sarcoglycan, delta (dystrophin-associated glycoprotein)	protein-coding	0.000000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-2992	chrX	103981757	103981957	+	1.71642	NA	promoter-TSS (NM_011276)	promoter-TSS (NM_011276)	-572	NM_011276	19820	Mm.427762	NM_011276	ENSMUSG00000056537	Rlim	AL022832|AW743871|Ha1r|Rlim1|Rnf12	ring finger protein, LIM domain interacting	protein-coding	0.010000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-1762	chr2	121661076	121661276	+	1.71642	NA	intron (NM_001360084, intron 1 of 13)	intron (NM_001360084, intron 1 of 13)	145881	NM_001360084	228564	Mm.121514	NM_172673	ENSMUSG00000027238	Frmd5	1500032A09Rik|A930004K21Rik|R75430	FERM domain containing 5	protein-coding	0.010000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-665	chr12	34041125	34041325	+	1.71642	NA	Intergenic	L1M2|LINE|L1	83554	NM_011658	22160	Mm.3280	NM_011658	ENSMUSG00000035799	Twist1	M-Twist|Pde|Ska10|Ska<m10Jus>|Twist|bHLHa38|pdt	twist basic helix-loop-helix transcription factor 1	protein-coding	0.015000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-328	chr10	62946799	62946999	+	1.71642	NA	promoter-TSS (NM_177372)	promoter-TSS (NM_177372)	-130	NR_152862	327762	Mm.21492	NM_177372	ENSMUSG00000036875	Dna2	Dna2l|E130315B21Rik	DNA replication helicase/nuclease 2	protein-coding	0.105000	0.656716			
ePOU_nocontrol_ChIP_peaks_unique-1196	chr16	17646342	17646542	+	1.71642	NA	promoter-TSS (NM_001166164)	promoter-TSS (NM_001166164)	-28	NM_001166164	72315	Mm.297777	NM_001166164	ENSMUSG00000041617	Ccdc74a	2310015A05Rik	coiled-coil domain containing 74A	protein-coding	0.125000	0.701493			
ePOU_nocontrol_ChIP_peaks_unique-687	chr12	53647335	53647535	+	1.71642	NA	intron (NM_001370962, intron 4 of 11)	intron (NM_001370962, intron 4 of 11)	399003	NM_001370963	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding	0.000000	0.298507			
ePOU_nocontrol_ChIP_peaks_unique-2816	chr8	124722074	124722274	+	1.71642	NA	promoter-TSS (NM_001357356)	promoter-TSS (NM_001357356)	8	NM_026855	68865	Mm.22779	NM_026855	ENSMUSG00000031982	Arv1	1110067L22Rik|AI461928|AW121084	ARV1 homolog, fatty acid homeostasis modulator	protein-coding	0.085000	0.651741			
ePOU_nocontrol_ChIP_peaks_unique-113	chr1	95313688	95313888	+	1.71642	NA	5' UTR (NM_026321, exon 1 of 3)	5' UTR (NM_026321, exon 1 of 3)	160	NM_026321	67698	Mm.272705	NM_026321	ENSMUSG00000051185	Fam174a	2310044D20Rik|Fam174|Naa6|Tmem157	family with sequence similarity 174, member A	protein-coding	0.130000	0.746269			
Oct4_nocontrol_ChIP_peaks_unique-31	chr14	63543768	63543968	+	1.71642	NA	promoter-TSS (NM_177594)	promoter-TSS (NM_177594)	85	NM_177594	210376	Mm.441613	NM_177594	ENSMUSG00000035078	Mtmr9	9430075G12Rik|AA516943|AF073881|LIP-STYX|MTMR8|mMTMH3	myotubularin related protein 9	protein-coding	0.105000	0.726368			
ePOU_nocontrol_ChIP_peaks_unique-1019	chr14	87260468	87260668	+	1.71642	NA	Intergenic	Intergenic	-119344	NM_019670	56419	Mm.440585	NM_019670	ENSMUSG00000022021	Diaph3	4930417P13Rik|Dia2|Diap3|Drf3|p134MDia2	diaphanous related formin 3	protein-coding	0.005000	0.298507	49(CATGAATAATGCATT,+,0.00),49(CATGAATAATGCATT,-,0.00)	56(AATGCATTTTTATA,-,0.00)	
Oct4_nocontrol_ChIP_peaks_unique-51	chr18	67724713	67724913	+	1.71642	NA	promoter-TSS (NM_001127177)	promoter-TSS (NM_001127177)	-192	NM_001127177	19255	Mm.260433	NM_008977	ENSMUSG00000024539	Ptpn2	AI325124|Ptpt|TC-PTP	protein tyrosine phosphatase, non-receptor type 2	protein-coding	0.040000	0.601990			
ePOU_nocontrol_ChIP_peaks_unique-1871	chr3	36863363	36863563	+	1.71642	NA	intron (NM_172679, intron 1 of 85)	CpG	357	NM_172679	229227	Mm.207907	NM_172679	ENSMUSG00000037270	4932438A13Rik	4732443H21|B830039D19Rik|D630029K19Rik|FSA|Kiaa1109|Tweek	RIKEN cDNA 4932438A13 gene	protein-coding	0.105000	0.751244			
ePOU_nocontrol_ChIP_peaks_unique-2797	chr8	107048450	107048650	+	1.71642	NA	promoter-TSS (NM_026513)	promoter-TSS (NM_026513)	64	NM_026513	68023	Mm.482335	NM_026513	ENSMUSG00000078931	Pdf	2610019N19Rik	peptide deformylase (mitochondrial)	protein-coding	0.135000	0.751244			
ePOU_nocontrol_ChIP_peaks_unique-2413	chr6	34384298	34384498	+	1.71642	NA	exon (NM_172398, exon 1 of 10)	exon (NM_172398, exon 1 of 10)	151	NR_149754	67861	Mm.70371	NM_172398	ENSMUSG00000061758	Akr1b10	2310005E10Rik|Akr1b16	aldo-keto reductase family 1, member B10 (aldose reductase)	protein-coding	0.045000	0.572139			
ePOU_nocontrol_ChIP_peaks_unique-462	chr11	38151179	38151379	+	1.71642	NA	Intergenic	Intergenic	368766	NR_040295	100502917	Mm.61144	NR_040295		Gm12130	-	predicted gene 12130	ncRNA	0.005000	0.373134			
Oct4_nocontrol_ChIP_peaks_unique-19	chr11	3914147	3914347	+	1.71642	NA	5' UTR (NM_153142, exon 1 of 2)	5' UTR (NM_153142, exon 1 of 2)	417	NM_153142	103710	Mm.171514	NM_153142	ENSMUSG00000048807	Slc35e4	A330108F03Rik|AI414849|AI536442	solute carrier family 35, member E4	protein-coding	0.020000	0.542289			
ePOU_nocontrol_ChIP_peaks_unique-216	chr1	182960169	182960369	+	1.71642	NA	intron (NM_016928, intron 1 of 3)	intron (NM_016928, intron 1 of 3)	5481	NM_016928	53791	Mm.116894	NM_016928	ENSMUSG00000079164	Tlr5	-	toll-like receptor 5	protein-coding	0.045000	0.582090			
ePOU_nocontrol_ChIP_peaks_unique-307	chr10	41887207	41887407	+	1.71642	NA	promoter-TSS (NM_001013370)	promoter-TSS (NM_001013370)	-132	NM_001013370	140742	Mm.139418	NM_001013370	ENSMUSG00000038332	Sesn1	1110002G11Rik|AU044290|Pa26|Sest1	sestrin 1	protein-coding	0.095000	0.706468			
ePOU_nocontrol_ChIP_peaks_unique-2207	chr5	23576699	23576899	+	1.71642	NA	intron (NM_001359176, intron 2 of 15)	intron (NM_001359176, intron 2 of 15)	39772	NM_009274	20817	Mm.288728	NM_009274	ENSMUSG00000062604	Srpk2	AW226533|AW492537|AW547358|Wbp6|mSRPK2	serine/arginine-rich protein specific kinase 2	protein-coding	0.005000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-2194	chr5	5379903	5380103	+	1.71642	NA	intron (NM_011074, intron 1 of 14)	CpG	248	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding	0.090000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-2172	chr4	139197532	139197732	+	1.71642	NA	intron (NM_001271405, intron 1 of 8)	intron (NM_001271405, intron 1 of 8)	3521	NM_001271405	12345	Mm.2945	NM_009798	ENSMUSG00000028745	Capzb	1700120C01Rik|AI325129|CPB1|CPB2|CPbeat2|CPbeta1|CPbeta2|Cappb1	capping protein (actin filament) muscle Z-line, beta	protein-coding	0.015000	0.547264			
ePOU_nocontrol_ChIP_peaks_unique-1747	chr2	112315683	112315883	+	1.71642	NA	intron (NM_133648, intron 1 of 24)	L1MB3|LINE|L1	31095	NM_133648	107723	Mm.491155	NM_133648	ENSMUSG00000027130	Slc12a6	9530023I19Rik|KCC3|gaxp	solute carrier family 12, member 6	protein-coding	0.020000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-1821	chr2	163297243	163297443	+	1.71642	NA	intron (NM_001363064, intron 3 of 8)	intron (NM_001363064, intron 3 of 8)	71889	NM_001098799	269389	Mm.207709	NM_001098799	ENSMUSG00000074607	Tox2	AI851523|AV026525|BI987407|Gcx1|RxHMG1	TOX high mobility group box family member 2	protein-coding	0.030000	0.462687		53(ATTGAATATTCATG,+,0.00),53(ATTGAATATTCATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-773	chr12	116047735	116047935	+	1.71642	NA	5' UTR (NM_019565, exon 1 of 3)	5' UTR (NM_019565, exon 1 of 3)	111	NM_001004066	56220	Mm.254997	NM_019565	ENSMUSG00000042063	Zfp386	Kzf1|mKIAA4205	zinc finger protein 386 (Kruppel-like)	protein-coding	0.090000	0.601990			-69(CCTTTGTGTTGGAAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1158	chr15	95133801	95134001	+	1.71642	NA	intron (NR_015482, intron 2 of 2)	Lx2A1|LINE|L1	15417	NR_015482	100043315	Mm.159041	NR_015482	ENSMUSG00000100603	LOC100043315	-	uncharacterized LOC100043315	ncRNA	0.000000	0.363184			-25(CATTTGAGATGTAAAT,+,0.00)
merged_common-2	chr1	45281660	45281860	+	1.71642	NA	Intergenic	L1MA6|LINE|L1	-29778	NM_009930	12825	Mm.249555	NM_009930	ENSMUSG00000026043	Col3a1	AW550625|Col3a-1|Tsk-2|Tsk2	collagen, type III, alpha 1	protein-coding	0.005000	0.303483			-71(TCTTTTTGTTGAAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1472	chr18	58432507	58432707	+	1.71642	NA	Intergenic	Intergenic	-123633	NM_001081072	225579	Mm.258517	NM_001081072	ENSMUSG00000024600	Slc27a6	4732438L20Rik|FACVL2|FATP6|VLCS-H1	solute carrier family 27 (fatty acid transporter), member 6	protein-coding	0.005000	0.318408	9(CATGTATAATTCAGC,+,0.00)		-83(CTTTAAAAAAAAAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2766	chr8	79722157	79722357	+	1.71642	NA	intron (NM_026904, intron 3 of 4)	intron (NM_026904, intron 3 of 4)	10408	NM_001357235	68999	Mm.257445	NM_026904	ENSMUSG00000036977	Anapc10	1500026N15Rik|A830003M23Rik|APC10	anaphase promoting complex subunit 10	protein-coding	0.000000	0.457711			-49(TGTTTCCATTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2543	chr6	148795085	148795285	+	1.71642	NA	intron (NM_001081113, intron 16 of 24)	intron (NM_001081113, intron 16 of 24)	36282	NM_001081113	320727	Mm.260105	NM_001081113	ENSMUSG00000040029	Ipo8	6230418K12Rik|Abcc10|C130009K11Rik|MRP7|OM-1|Om1|Ranbp8	importin 8	protein-coding	0.005000	0.393035			-98(ATTTGCTTAAGTATAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-63	chr1	58199444	58199644	+	1.71642	NA	intron (NM_023617, intron 34 of 34)	intron (NM_023617, intron 34 of 34)	-10853	NM_023631	71872	Mm.244525	NM_023631	ENSMUSG00000038242	Aox4	2310003G12Rik|Aoh2	aldehyde oxidase 4	protein-coding	0.000000	0.323383			-47(ATCACCAAAACAAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1737	chr2	103566098	103566298	+	1.71642	NA	promoter-TSS (NM_178890)	promoter-TSS (NM_178890)	-112	NM_178890	99382	Mm.35850	NM_178890	ENSMUSG00000032724	Abtb2	AW539457|BPOZ-2	ankyrin repeat and BTB (POZ) domain containing 2	protein-coding	0.060000	0.597015			
ePOU_nocontrol_ChIP_peaks_unique-1753	chr2	116792315	116792515	+	1.71642	NA	Intergenic	Intergenic	-86276	NM_001355572	67356	Mm.131623	NM_026104	ENSMUSG00000027355	Tmco5	1700095F04Rik|Tmco5a	transmembrane and coiled-coil domains 5	protein-coding	0.015000	0.422886		43(TATGCATAGTCAAA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-836	chr13	53082448	53082648	+	1.71642	NA	Intergenic	MER58A|DNA|hAT-Charlie	-101509	NM_017373	18030	Mm.136604	NM_017373	ENSMUSG00000056749	Nfil3	AV225605|E4BP4	nuclear factor, interleukin 3, regulated	protein-coding	0.015000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-1023	chr14	99313934	99314134	+	1.71642	NA	TTS (NM_009769)	TTS (NM_009769)	15343	NM_009769	12224	Mm.30262	NM_009769	ENSMUSG00000005148	Klf5	4930520J07Rik|Bteb2|CKLF|IKLF	Kruppel-like factor 5	protein-coding	0.005000	0.328358			47(GGATAATCATTCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2191	chr5	3596053	3596253	+	1.71642	NA	promoter-TSS (NM_001293806)	promoter-TSS (NM_001293806)	87	NM_027777	71382	Mm.379196	NM_027777	ENSMUSG00000005907	Pex1	5430414H02Rik|E330005K07Rik|ZWS1	peroxisomal biogenesis factor 1	protein-coding	0.090000	0.606965			
ePOU_nocontrol_ChIP_peaks_unique-1615	chr2	4116189	4116389	+	1.71642	NA	intron (NM_001347086, intron 2 of 24)	intron (NM_001347086, intron 2 of 24)	24852	NR_040500	73489	Mm.488103	NR_040500	ENSMUSG00000084859	1700080N15Rik	4933408D14Rik	RIKEN cDNA 1700080N15 gene	ncRNA	0.005000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-1623	chr2	9610658	9610858	+	1.71642	NA	Intergenic	L1M5|LINE|L1	267842	NM_001355111	14462	Mm.313866	NM_008091	ENSMUSG00000015619	Gata3	Gata-3|jal	GATA binding protein 3	protein-coding	0.005000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-854	chr13	76188485	76188685	+	1.71642	NA	TTS (NM_001081352)	TTS (NM_001081352)	83359	NM_001370926	238726	Mm.71912	NM_001370926	ENSMUSG00000109228	Fam81b	Gm276	family with sequence similarity 81, member B	protein-coding	0.005000	0.308458			
ePOU_nocontrol_ChIP_peaks_unique-2500	chr6	108569406	108569606	+	1.71642	NA	Intergenic	Intergenic	53661	NR_040757	75394	Mm.395061	NR_040757	ENSMUSG00000087341	0610040F04Rik	-	RIKEN cDNA 0610040F04 gene	ncRNA	0.015000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-2892	chr9	63880925	63881125	+	1.71642	NA	Intergenic	Intergenic	-123031	NM_016769	17127	Mm.7320	NM_016769	ENSMUSG00000032402	Smad3	AU022421|Madh3	SMAD family member 3	protein-coding	0.030000	0.388060			-12(GCATTTTCATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-111	chr1	93343629	93343829	+	1.71642	NA	promoter-TSS (NM_080850)	intron (NM_023200, intron 1 of 9)	101	NM_023200	66385	Mm.88704	NM_023200	ENSMUSG00000026275	Ppp1r7	2310014J01Rik|SDS22	protein phosphatase 1, regulatory subunit 7	protein-coding	0.090000	0.671642			
ePOU_nocontrol_ChIP_peaks_unique-442	chr11	23653820	23654020	+	1.71642	NA	intron (NR_157299, intron 1 of 2)	L2a|LINE|L2	-11754	NM_001033654	74467	Mm.29536	NM_028304	ENSMUSG00000020280	Pus10	2810013G11Rik|4933435A13Rik|AU014648|C77560|Ccdc139	pseudouridylate synthase 10	protein-coding	0.015000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-1094	chr15	40166752	40166952	+	1.71642	NA	intron (NR_155349, intron 2 of 2)	intron (NR_155349, intron 2 of 2)	4245	NR_155349	102636151	Mm.321976	NR_155349	ENSMUSG00000115367	Gm33301	-	predicted gene, 33301	ncRNA	0.010000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-2923	chr9	91355775	91355975	+	1.71642	NA	Intergenic	CpG	9924	NM_009573	22771	Mm.335350	NM_009573	ENSMUSG00000032368	Zic1	ZIC|ZNF201	zinc finger protein of the cerebellum 1	protein-coding	0.080000	0.691542		0(CATGCATATTCATT,+,0.00),0(CATGCATATTCATT,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-35	chr1	34197435	34197635	+	1.71642	NA	intron (NM_001276764, intron 44 of 102)	intron (NM_001276764, intron 44 of 102)	37275	NM_010081	13518	Mm.336625	NM_010081	ENSMUSG00000026131	Dst	2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339	dystonin	protein-coding	0.020000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-1089	chr15	38457252	38457452	+	1.71642	NA	Intergenic	Intergenic	33195	NR_105916	102465574		NR_105916	ENSMUSG00000099110	Mir6951	Gm27765|mmu-mir-6951	microRNA 6951	ncRNA	0.000000	0.557214			
ePOU_nocontrol_ChIP_peaks_unique-1859	chr3	27098193	27098393	+	1.71642	NA	3' UTR (NM_001177626, exon 24 of 24)	3' UTR (NM_001177626, exon 24 of 24)	55561	NM_007900	13605	Mm.261453	NM_007900	ENSMUSG00000027699	Ect2	AI528536	ect2 oncogene	protein-coding	0.015000	0.328358			
ePOU_nocontrol_ChIP_peaks_unique-2082	chr4	48272868	48273068	+	1.71642	NA	intron (NM_001355184, intron 1 of 10)	intron (NM_001355184, intron 1 of 10)	6621	NM_029572	76299	Mm.317701	NM_029572	ENSMUSG00000028343	Erp44	1110001E24Rik|AI849526|AL033348|Txndc4	endoplasmic reticulum protein 44	protein-coding	0.000000	0.378109			41(ATTTGCATGACCCATG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1423	chr18	10750633	10750833	+	1.71642	NA	intron (NM_001364997, intron 5 of 21)	intron (NM_001364997, intron 5 of 21)	25108	NM_001364997	225164	Mm.21500	NM_144860	ENSMUSG00000024294	Mib1	DIP-1|E430019M12Rik|Mib	mindbomb E3 ubiquitin protein ligase 1	protein-coding	0.005000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-337	chr10	72601977	72602177	+	1.71642	NA	Intergenic	Intergenic	-52769	NM_001293684	52696	Mm.62876	NM_025635	ENSMUSG00000019923	Zwint	2010007E07Rik|2600001N01Rik|D10Ertd749e|Zwint-1	ZW10 interactor	protein-coding	0.005000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-1719	chr2	80554531	80554731	+	1.71642	NA	intron (NM_001355410, intron 4 of 31)	L1Md_F2|LINE|L1	26551	NM_001355411	50884	Mm.25203	NM_016965	ENSMUSG00000027002	Nckap1	C79304|H19|Hem-2|Hem2|Nap1|mKIAA0587|mh19|p125Nap1	NCK-associated protein 1	protein-coding	0.010000	0.412935			1(GTTTGCATAACCAATG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1979	chr3	108017960	108018160	+	1.71642	NA	promoter-TSS (NM_010358)	promoter-TSS (NM_010358)	-87	NM_010358	14862	Mm.37199	NM_010358	ENSMUSG00000058135	Gstm1	Gstb-1|Gstb1	glutathione S-transferase, mu 1	protein-coding	0.055000	0.597015			
ePOU_nocontrol_ChIP_peaks_unique-1101	chr15	48546890	48547090	+	1.71642	NA	intron (NM_001081391, intron 3 of 70)	intron (NM_001081391, intron 3 of 70)	244999	NM_001081391	239420	Mm.309363	NM_001081391	ENSMUSG00000022311	Csmd3	4930500N14Rik|mKIAA1894	CUB and Sushi multiple domains 3	protein-coding	0.000000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-1706	chr2	72881540	72881740	+	1.71642	NA	Intergenic	Intergenic	-67923	NR_102349	76218	Mm.75260	NR_102348	ENSMUSG00000085427	6430710C18Rik	5033406J01Rik	RIKEN cDNA 6430710C18 gene	ncRNA	0.005000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-481	chr11	51756425	51756625	+	1.71642	NA	5' UTR (NM_175255, exon 1 of 23)	5' UTR (NM_175255, exon 1 of 23)	309	NM_001290785	77371	Mm.33878	NM_175255	ENSMUSG00000036391	Sec24a	-	Sec24 related gene family, member A (S. cerevisiae)	protein-coding	0.115000	0.751244			
ePOU_nocontrol_ChIP_peaks_unique-962	chr14	48446117	48446317	+	1.71642	NA	promoter-TSS (NM_172600)	promoter-TSS (NM_172600)	94	NM_001310584	218989	Mm.85211	NM_172600	ENSMUSG00000036339	Tmem260	5930435P15|6720456H20Rik	transmembrane protein 260	protein-coding	0.060000	0.572139			
ePOU_nocontrol_ChIP_peaks_unique-327	chr10	62602176	62602376	+	1.71642	NA	promoter-TSS (NM_019553)	promoter-TSS (NM_019553)	22	NM_019553	56200	Mm.413275	NM_019553	ENSMUSG00000020075	Ddx21	AI255159|AL022742|D10Ertd645e|D10Wsu42e	DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	protein-coding	0.095000	0.636816			
ePOU_nocontrol_ChIP_peaks_unique-960	chr14	47318969	47319169	+	1.71642	NA	intron (NM_178684, intron 3 of 3)	intron (NM_178684, intron 3 of 3)	20795	NM_178684	218975	Mm.212297	NM_178684	ENSMUSG00000021840	Mapk1ip1l	9130202B12|C130032J12Rik	mitogen-activated protein kinase 1 interacting protein 1-like	protein-coding	0.020000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-1029	chr14	102173773	102173973	+	1.71642	NA	Intergenic	Intergenic	333250	NM_001347628	380928	Mm.218981	NM_201529	ENSMUSG00000033060	Lmo7	C78582|FBXO20|Gm914|mKIAA0858	LIM domain only 7	protein-coding	0.010000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-1939	chr3	84039093	84039293	+	1.71642	NA	intron (NM_172681, intron 2 of 34)	intron (NM_172681, intron 2 of 34)	968	NM_172681	229473	Mm.28838	NM_172681	ENSMUSG00000033767	Tmem131l	D930015E06Rik|Kiaa0922|mKIAA0922	transmembrane 131 like	protein-coding	0.060000	0.646766			7(TATTTGCCTTGCAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2545	chr7	3617167	3617367	+	1.71642	NA	promoter-TSS (NM_025348)	promoter-TSS (NM_025348)	-106	NM_025348	66091	Mm.17851	NM_025348	ENSMUSG00000035674	Ndufa3	1010001M12Rik|1700022J01Rik	NADH:ubiquinone oxidoreductase subunit A3	protein-coding	0.035000	0.497512			
ePOU_nocontrol_ChIP_peaks_unique-165	chr1	153191583	153191783	+	1.71642	NA	Intergenic	Intergenic	-5236	NM_008485	16782	Mm.329272	NM_008485	ENSMUSG00000026479	Lamc2	AA589349	laminin, gamma 2	protein-coding	0.030000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-383	chr10	105867546	105867746	+	1.71642	NA	Intergenic	Intergenic	26167	NM_025602	52713	Mm.339224	NM_025602	ENSMUSG00000019897	Ccdc59	2300004H16Rik|D10Ertd718e	coiled-coil domain containing 59	protein-coding	0.005000	0.293532			
ePOU_nocontrol_ChIP_peaks_unique-2083	chr4	51843199	51843399	+	1.71642	NA	Intergenic	Intergenic	207811	NR_040668	329844	Mm.128934	NR_040668	ENSMUSG00000085515	C630028M04Rik	-	RIKEN cDNA C630028M04 gene	ncRNA	0.005000	0.273632		2(AATAAATTTGCATG,-,0.00)	7(ATTTGCATGAATATTA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1402	chr17	85434060	85434260	+	1.71642	NA	intron (NM_028576, intron 8 of 10)	intron (NM_028576, intron 8 of 10)	184236	NR_038084	100043902	Mm.150838	NR_015385	ENSMUSG00000093460	Six3os1	D17Mgi26|E130112H22Rik|Rncr1|Six3os	SIX homeobox 3, opposite strand 1	ncRNA	0.020000	0.432836			39(ATTTACATGAAAACAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1828	chr2	166730280	166730480	+	1.71642	NA	Intergenic	Intergenic	-16548	NM_177782	277360	Mm.34420	NM_177782	ENSMUSG00000039621	Prex1	G630042G04|P-REX1|Setd6	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1	protein-coding	0.025000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-1851	chr3	18625283	18625483	+	1.71642	NA	Intergenic	Intergenic	-144906	NR_040544	73959	Mm.60616	NR_040544	ENSMUSG00000102699	4930433B08Rik	-	RIKEN cDNA 4930433B08 gene	ncRNA	0.035000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-752	chr12	99352203	99352403	+	1.71642	NA	intron (NM_183186, intron 2 of 5)	intron (NM_183186, intron 2 of 5)	97771	NM_183186	71375	Mm.341972	NM_183186	ENSMUSG00000033713	Foxn3	5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1	forkhead box N3	protein-coding	0.020000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-2360	chr5	138194211	138194411	+	1.71642	NA	promoter-TSS (NM_177878)	promoter-TSS (NM_177878)	-3	NM_177878	330216	Mm.19719	NM_177878	ENSMUSG00000049285	Mblac1	-	metallo-beta-lactamase domain containing 1	protein-coding	0.050000	0.562189			
ePOU_nocontrol_ChIP_peaks_unique-586	chr11	102296738	102296938	+	1.71642	NA	promoter-TSS (NM_001098836)	promoter-TSS (NM_001098836)	-209	NM_001098836	217218	Mm.390381	NM_001098836	ENSMUSG00000059995	Atxn7l3	E030022H21Rik	ataxin 7-like 3	protein-coding	0.155000	0.741294			
ePOU_nocontrol_ChIP_peaks_unique-87	chr1	74600844	74601044	+	1.71642	NA	promoter-TSS (NM_175031)	promoter-TSS (NM_175031)	453	NM_021313	57751	Mm.280920	NM_021313	ENSMUSG00000026171	Rnf25	0610009H16Rik|AO7	ring finger protein 25	protein-coding	0.035000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-2560	chr7	25869355	25869555	+	1.71642	NA	Intergenic	B4A|SINE|B4	-28203	NM_009999	13088	Mm.218749	NM_009999	ENSMUSG00000030483	Cyp2b10	Cyp2b|Cyp2b20|p16	cytochrome P450, family 2, subfamily b, polypeptide 10	protein-coding	0.005000	0.472637			
Oct4_nocontrol_ChIP_peaks_unique-18	chr10	115251445	115251645	+	1.71642	NA	promoter-TSS (NM_025706)	promoter-TSS (NM_025706)	-52	NM_025706	66687	Mm.22252	NM_025706	ENSMUSG00000020130	Tbc1d15	4432405K22Rik|AU022358|AU023730|AW557774|Ly6dl|Rab7-GAP	TBC1 domain family, member 15	protein-coding	0.090000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-831	chr13	48572410	48572610	+	1.71642	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-34238	NR_029725	387244		NR_029725	ENSMUSG00000065421	Mirlet7a-1	Let-7a|Mirnlet7a|Mirnlet7a-1|let-7a-1	microRNA let7a-1	ncRNA	0.000000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-2896	chr9	65496467	65496667	+	1.71642	NA	intron (NM_001370871, intron 14 of 14)	ORR1A2|LTR|ERVL-MaLR	23652	NM_001370871	330963	Mm.379561	NM_001370871	ENSMUSG00000066510	Ankdd1a	A730067D02|A730067D02Rik|EG330963|Gm1473	ankyrin repeat and death domain containing 1A	protein-coding	0.000000	0.492537			
ePOU_nocontrol_ChIP_peaks_unique-621	chr11	117963672	117963872	+	1.71642	NA	Intergenic	Intergenic	5594	NM_007707	12702	Mm.3468	NM_007707	ENSMUSG00000053113	Socs3	Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3	suppressor of cytokine signaling 3	protein-coding	0.060000	0.646766			
merged_common-102	chr15	81872299	81872499	+	1.71642	NA	promoter-TSS (NM_026737)	promoter-TSS (NM_026737)	-64	NM_080633	11429	Mm.154581	NM_080633	ENSMUSG00000022477	Aco2	Aco-2|Aco3|D10Wsu183e	aconitase 2, mitochondrial	protein-coding	0.075000	0.582090			
ePOU_nocontrol_ChIP_peaks_unique-775	chr12	117162018	117162218	+	1.71642	NA	intron (NM_011215, intron 13 of 22)	intron (NM_011215, intron 13 of 22)	-10849	NR_033538	100038689	Mm.445351	NR_033538	ENSMUSG00000099907	Gm10421	-	predicted gene 10421	ncRNA	0.010000	0.388060	-29(CATGAATTATGCATT,+,0.00),-29(CATGAATTATGCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1240	chr16	42907014	42907214	+	1.71642	NA	promoter-TSS (NM_001285805)	promoter-TSS (NM_001285805)	-531	NM_001285805	56490	Mm.136238	NM_019778	ENSMUSG00000022708	Zbtb20	1300017A20Rik|7330412A13Rik|A930017C21Rik|D16Wsu73e|DPZF|HOF|J20|ODA-8S|Oda8|Tg(PDGFB-APPSwInd)20Lms|Zfp288	zinc finger and BTB domain containing 20	protein-coding	0.005000	0.308458			
ePOU_nocontrol_ChIP_peaks_unique-2690	chr8	8575158	8575358	+	1.71642	NA	Intergenic	Intergenic	85984	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding	0.040000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-70	chr1	62353056	62353256	+	1.71642	NA	intron (NM_001081050, intron 18 of 22)	L1MA8|LINE|L1	-217047	NR_151537	105243940		NR_151537		Pard3bos2	Gm12747	par-3 family cell polarity regulator beta, opposite strand 2	ncRNA	0.010000	0.323383			
ePOU_nocontrol_ChIP_peaks_unique-1807	chr2	150837400	150837600	+	1.71642	NA	intron (NM_001356550, intron 5 of 8)	intron (NM_001356550, intron 5 of 8)	5070	NM_001356550	76192	Mm.112632	NM_024465	ENSMUSG00000032046	Abhd12	1500011G07Rik|6330583M11Rik|AI431047|AW547313	abhydrolase domain containing 12	protein-coding	0.030000	0.472637			
ePOU_nocontrol_ChIP_peaks_unique-1520	chr19	4989098	4989298	+	1.71642	NA	intron (NM_153553, intron 1 of 7)	intron (NM_153553, intron 1 of 7)	773	NM_153553	225872	Mm.287867	NM_153553	ENSMUSG00000045903	Npas4	LE-PAS|Nxf	neuronal PAS domain protein 4	protein-coding	0.055000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-78	chr1	66817396	66817596	+	1.71642	NA	promoter-TSS (NM_001368830)	promoter-TSS (NM_001368830)	99	NM_001368830	68691	Mm.240912	NM_177645	ENSMUSG00000026004	Kansl1l	1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189	KAT8 regulatory NSL complex subunit 1-like	protein-coding	0.170000	0.791045			
ePOU_nocontrol_ChIP_peaks_unique-1934	chr3	81337657	81337857	+	1.71642	NA	Intergenic	Intergenic	301341	NM_019971	54635	Mm.331089	NM_019971	ENSMUSG00000028019	Pdgfc	1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E	platelet-derived growth factor, C polypeptide	protein-coding	0.005000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-1879	chr3	45451793	45451993	+	1.71642	NA	Intergenic	L1ME3A|LINE|L1	-12584	NR_040594	72274	Mm.396202	NR_040594	ENSMUSG00000100799	1700027H10Rik	-	RIKEN cDNA 1700027H10 gene	ncRNA	0.000000	0.318408			
ePOU_nocontrol_ChIP_peaks_unique-2003	chr3	126194853	126195053	+	1.71642	NA	Intergenic	Intergenic	-168899	NM_173451	271970	Mm.317021	NM_173451	ENSMUSG00000046561	Arsj	9330196J05Rik|D830047F08	arylsulfatase J	protein-coding	0.000000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-993	chr14	65939652	65939852	+	1.71642	NA	intron (NM_172604, intron 1 of 5)	intron (NM_172604, intron 1 of 5)	13992	NM_172604	219151	Mm.344095	NM_172604	ENSMUSG00000034463	Scara3	APC7|C130058N24Rik|CSR|CSR1|MSLR1|MSRL1	scavenger receptor class A, member 3	protein-coding	0.000000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-1384	chr17	75178588	75178788	+	1.71642	NA	promoter-TSS (NM_001331234)	promoter-TSS (NM_001331234)	-93	NM_001331233	268977	Mm.269747	NM_019919	ENSMUSG00000001870	Ltbp1	9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo	latent transforming growth factor beta binding protein 1	protein-coding	0.030000	0.517413			
ePOU_nocontrol_ChIP_peaks_unique-2507	chr6	115675471	115675671	+	1.71642	NA	promoter-TSS (NR_152134)	promoter-TSS (NR_152134)	317	NM_001356334	110157	Mm.184163	NM_029780	ENSMUSG00000000441	Raf1	6430402F14Rik|AA990557|BB129353|Craf1|D830050J10Rik|Raf-1|c-Raf|cRaf|v-Raf	v-raf-leukemia viral oncogene 1	protein-coding	0.030000	0.537313			
ePOU_nocontrol_ChIP_peaks_unique-1283	chr16	85330476	85330676	+	1.71642	NA	Intergenic	Intergenic	-156869	NM_007471	11820	Mm.277585	NM_007471	ENSMUSG00000022892	App	Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp	amyloid beta (A4) precursor protein	protein-coding	0.000000	0.308458			
ePOU_nocontrol_ChIP_peaks_unique-1527	chr19	7217397	7217597	+	1.71642	NA	exon (NM_007750, exon 1 of 2)	exon (NM_007750, exon 1 of 2)	119	NM_007750	12868	Mm.14022	NM_007750	ENSMUSG00000035885	Cox8a	COX8L	cytochrome c oxidase subunit 8A	protein-coding	0.110000	0.686567			
Oct4_nocontrol_ChIP_peaks_unique-94	chr7	135024627	135024827	+	1.71642	NA	intron (NM_001033420, intron 29 of 51)	L1MC5|LINE|L1	-86297	NM_001143802	627214	Mm.323610	NM_001143802	ENSMUSG00000073805	Insyn2a	B830028B13Rik|Fam196a|InSyn2	inhibitory synaptic factor 2A	protein-coding	0.010000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-1186	chr16	10649454	10649654	+	1.71642	NA	intron (NM_177562, intron 18 of 22)	intron (NM_177562, intron 18 of 22)	104215	NM_177562	74374	Mm.159176	NM_177562	ENSMUSG00000068663	Clec16a	4932416N17Rik|curt|mKIAA0350	C-type lectin domain family 16, member A	protein-coding	0.005000	0.338308			12(ATTAAAATGAGAATGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1154	chr15	93293361	93293561	+	1.71642	NA	intron (NM_024189, intron 2 of 3)	intron (NM_024189, intron 2 of 3)	-18282	NM_001033275	223827	Mm.22819	NM_001033275	ENSMUSG00000036197	Gxylt1	Glt8d3|Gm1228|Gm87	glucoside xylosyltransferase 1	protein-coding	0.000000	0.243781			11(TTATTCTTATTCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2610	chr7	81763842	81764042	+	1.71642	NA	intron (NM_025997, intron 1 of 2)	AT_rich|Low_complexity|Low_complexity	989	NM_025997	67148	Mm.241472	NM_025997	ENSMUSG00000038646	Ramac	2410047I02Rik|2610204K14Rik|Fam103a1|RAM|Rammet	RNA guanine-7 methyltransferase activating subunit	protein-coding	0.005000	0.258706		35(TATACATATGTATT,+,0.00),35(TATACATATGTATT,-,0.00)	55(TTTTACATCATAATAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-124	chr1	119179449	119179649	+	1.71642	NA	Intergenic	Intergenic	-125930	NM_001081125	14633	Mm.273292	NM_001081125	ENSMUSG00000048402	Gli2	-	GLI-Kruppel family member GLI2	protein-coding	0.005000	0.363184			-100(TATTTGTTTTGTATAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2069	chr4	34327751	34327951	+	1.71642	NA	Intergenic	Intergenic	-222764	NM_001007589	433693	Mm.389532	NM_026019	ENSMUSG00000028291	Akirin2	2700059D21Rik|AA114675|AA522011|AU019887|Akirin-2	akirin 2	protein-coding	0.005000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-285	chr10	31445969	31446169	+	1.71642	NA	promoter-TSS (NM_001359366)	promoter-TSS (NM_001359366)	-111	NM_001359365	21987	Mm.439966	NM_009413	ENSMUSG00000000296	Tpd52l1	D53	tumor protein D52-like 1	protein-coding	0.045000	0.626866			
ePOU_nocontrol_ChIP_peaks_unique-2501	chr6	109229915	109230115	+	1.71642	NA	Intergenic	Intergenic	401374	NM_138677	192193	Mm.21596	NM_138677	ENSMUSG00000030104	Edem1	A130059K23Rik|EDEM|mKIAA0212	ER degradation enhancer, mannosidase alpha-like 1	protein-coding	0.000000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-1356	chr17	44767440	44767640	+	1.71642	NA	intron (NM_001146038, intron 2 of 8)	intron (NM_001146038, intron 2 of 8)	-9626	NM_178652	109115	Mm.431327	NM_178652	ENSMUSG00000038954	Supt3	2310066G22Rik|AI315192|SPT3|SPT3L|Supt3h	suppressor of Ty 3	protein-coding	0.005000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-1059	chr15	7684000	7684200	+	1.71642	NA	Intergenic	Intergenic	-125948	NM_001301332	14573	Mm.4679	NM_010275	ENSMUSG00000022144	Gdnf	AI385739|ATF	glial cell line derived neurotrophic factor	protein-coding	0.010000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-800	chr13	21362771	21362971	+	1.71642	NA	promoter-TSS (NM_016684)	promoter-TSS (NM_016684)	51	NM_016684	22758	Mm.24124	NM_016684	ENSMUSG00000036721	Zscan12	2510038J07Rik|FPM315|Zfp96|mKIAA0426|zfp-96	zinc finger and SCAN domain containing 12	protein-coding	0.075000	0.661692			
ePOU_nocontrol_ChIP_peaks_unique-2078	chr4	44829491	44829691	+	1.71642	NA	intron (NM_138590, intron 2 of 8)	intron (NM_138590, intron 2 of 8)	73032	NM_138590	319885	Mm.331576	NM_138590	ENSMUSG00000035649	Zcchc7	4930572I07Rik|D4Wsu132e	zinc finger, CCHC domain containing 7	protein-coding	0.000000	0.273632	-25(TATGAATTATGTATT,+,0.00),-25(TATGAATTATGTATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1288	chr16	89360201	89360401	+	1.71642	NA	Intergenic	Intergenic	43473	NM_028621	170656	Mm.46109	NM_028621	ENSMUSG00000058368	Krtap21-1	1110017B05Rik|AI506979|KAP21.1|Krtap16-7	keratin associated protein 21-1	protein-coding	0.005000	0.328358	20(TATGAATAATGCAAA,+,0.00),20(TATGAATAATGCAAA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1117	chr15	61474267	61474467	+	1.71642	NA	Intergenic	L1_Mus3|LINE|L1	300084	NR_040350	432956	Mm.404918	NR_040350	ENSMUSG00000116031	D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA	0.000000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-1179	chr16	4586717	4586917	+	1.71642	NA	Intergenic	CpG	-7896	NM_031184	83396	Mm.134072	NM_031184	ENSMUSG00000014303	Glis2	Gli5|Klf16|Nkl	GLIS family zinc finger 2	protein-coding	0.095000	0.716418		15(CATTCATATTTATG,+,0.00),15(CATTCATATTTATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-592	chr11	103935903	103936103	+	1.71642	NA	intron (NM_008740, intron 1 of 20)	intron (NM_008740, intron 1 of 20)	18053	NM_008740	18195	Mm.260117	NM_008740	ENSMUSG00000034187	Nsf	AI316878|AU020090|AU067812|SKD2	N-ethylmaleimide sensitive fusion protein	protein-coding	0.010000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-5	chr1	10007489	10007689	+	1.71642	NA	intron (NM_145692, intron 1 of 8)	intron (NM_145692, intron 1 of 8)	1547	NM_145692	69312	Mm.386795	NM_027033	ENSMUSG00000025916	Ppp1r42	1700011J18Rik|4930418G15Rik|Lrrc67|TLRR	protein phosphatase 1, regulatory subunit 42	protein-coding	0.000000	0.333333		56(TATGCATATTCCTA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2367	chr5	140418896	140419096	+	1.71642	NA	promoter-TSS (NM_133916)	promoter-TSS (NM_133916)	-309	NM_133916	27979	Mm.21671	NM_133916	ENSMUSG00000056076	Eif3b	AL033316|AL033334|AL033369|AW208965|D5Wsu45e|EIF3-ETA|EIF3-P110|EIF3-P116|Eif3s9|PRT1	eukaryotic translation initiation factor 3, subunit B	protein-coding	0.030000	0.447761			
ePOU_nocontrol_ChIP_peaks_unique-1987	chr3	115844565	115844765	+	1.71642	NA	Intergenic	Intergenic	43394	NR_027894	68161	Mm.392043	NR_015487	ENSMUSG00000054426	A930005H10Rik	-	RIKEN cDNA A930005H10 gene	ncRNA	0.005000	0.318408			-54(CTTTTCAAAAAAATGG,-,0.00),4(ATCTCCAAGAGAAAGT,-,0.00),61(ATATCCATGCCAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2408	chr6	32837286	32837486	+	1.71642	NA	intron (NM_025336, intron 6 of 7)	intron (NM_025336, intron 6 of 7)	222874	NM_025336	66075	Mm.21501	NM_025336	ENSMUSG00000053768	Chchd3	0610041L09Rik|1700039J09Rik|AW558177|Micos19	coiled-coil-helix-coiled-coil-helix domain containing 3	protein-coding	0.010000	0.542289			
ePOU_nocontrol_ChIP_peaks_unique-796	chr13	19578717	19578917	+	1.71642	NA	Intergenic	Intergenic	41013	NM_134065	105298	Mm.275054	NM_134065	ENSMUSG00000002808	Epdr1	AU040950|AV006210|Epdm2|Epdr2|MERP-1|MERP-2|MERP2|Ucc1	ependymin related protein 1 (zebrafish)	protein-coding	0.000000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-2783	chr8	92874889	92875089	+	1.71642	NA	intron (NM_001357375, intron 5 of 12)	intron (NM_001357375, intron 5 of 12)	19656	NM_001357374	270084	Mm.21463	NM_173014	ENSMUSG00000033192	Lpcat2	1-AGPAT 11|A330042H22|Aytl1|Aytl1a|lpafat1|lysoPAFAT|lysoPAFAT/LPCAT2	lysophosphatidylcholine acyltransferase 2	protein-coding	0.005000	0.303483			67(CTATTTTCTTCCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-418	chr11	7423578	7423778	+	1.71642	NA	Intergenic	Intergenic	-209755	NM_008343	16009	Mm.29254	NM_008343	ENSMUSG00000020427	Igfbp3	AI649005|IGFBP-3|IGgfbp3	insulin-like growth factor binding protein 3	protein-coding	0.025000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-741	chr12	87147343	87147543	+	1.71642	NA	promoter-TSS (NM_001252556)	promoter-TSS (NM_001252556)	-264	NM_001252556	14874	Mm.29652	NM_010363	ENSMUSG00000021033	Gstz1	GSTZ1-1|MAAI	glutathione transferase zeta 1 (maleylacetoacetate isomerase)	protein-coding	0.100000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-15	chr1	18846044	18846244	+	1.71642	NA	Intergenic	RLTR13B1|LTR|ERVK	-256878	NM_153154	226896	Mm.244858	NM_153154	ENSMUSG00000042596	Tfap2d	Tcfap2d	transcription factor AP-2, delta	protein-coding	0.010000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-1748	chr2	113664150	113664350	+	1.71642	NA	intron (NM_001285459, intron 13 of 16)	intron (NM_001285459, intron 13 of 16)	-20840	NM_001287818	14260	Mm.4938	NM_010230	ENSMUSG00000044042	Fmn1	Fmn|formin-1|ld	formin 1	protein-coding	0.015000	0.363184			-62(ATTTACATAACAAATC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1054	chr15	6628694	6628894	+	1.71642	NA	intron (NR_155272, intron 2 of 6)	intron (NR_155272, intron 2 of 6)	25509	NR_155272	102632231	Mm.444780	NR_155272		LOC102632231	-	uncharacterized LOC102632231	ncRNA	0.005000	0.323383			-39(GCAATCTTATTTAAAT,+,0.00),12(GCTTTGTCATTGAAAT,+,0.00)
Oct4_nocontrol_ChIP_peaks_unique-88	chr7	66109243	66109443	+	1.71642	NA	promoter-TSS (NM_001081163)	promoter-TSS (NM_001081163)	-149	NM_001081163	269941	Mm.333916	NM_001081163	ENSMUSG00000032640	Chsy1	-	chondroitin sulfate synthase 1	protein-coding	0.095000	0.631841			
ePOU_nocontrol_ChIP_peaks_unique-1633	chr2	16855365	16855565	+	1.71642	NA	Intergenic	RLTR13B3|LTR|ERVK	158261	NR_040632	75069	Mm.50378	NR_040632		4930515L03Rik	-	RIKEN cDNA 4930515L03 gene	ncRNA	0.010000	0.447761	36(CATGAATAATGCAAT,+,0.00),36(CATGAATAATGCAAT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-515	chr11	68691584	68691784	+	1.71642	NA	promoter-TSS (NM_175260)	promoter-TSS (NM_175260)	-231	NM_175260	77579	Mm.218233	NM_175260	ENSMUSG00000020900	Myh10	5730504C04Rik|9330167F11Rik|Fltn|Myhn-2|Myhn2|NMHC II-B|NMHC-B|NMHCII-B|NMMHC II-b|NMMHC-B|NMMHC-IIB|SMemb|mKIAA3005	myosin, heavy polypeptide 10, non-muscle	protein-coding	0.080000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-354	chr10	80928781	80928981	+	1.71642	NA	Intergenic	CpG	-1210	NM_008655	17873	Mm.1360	NM_008655	ENSMUSG00000015312	Gadd45b	AI323528|Myd118	growth arrest and DNA-damage-inducible 45 beta	protein-coding	0.085000	0.651741			
ePOU_nocontrol_ChIP_peaks_unique-1613	chr2	3713429	3713629	+	1.71642	NA	promoter-TSS (NM_025626)	promoter-TSS (NM_025626)	71	NM_025626	66540	Mm.277864	NM_025626	ENSMUSG00000026655	Fam107b	3110001A13Rik|AA589595|AA959793|AI132312	family with sequence similarity 107, member B	protein-coding	0.155000	0.746269			
ePOU_nocontrol_ChIP_peaks_unique-94	chr1	82217092	82217292	+	1.71642	NA	Intergenic	MER2B|DNA|TcMar-Tigger	74247	NM_010570	16367	Mm.4952	NM_010570	ENSMUSG00000055980	Irs1	G972R|IRS-1	insulin receptor substrate 1	protein-coding	0.005000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-1322	chr17	23726283	23726483	+	1.71642	NA	promoter-TSS (NM_023058)	promoter-TSS (NM_023058)	47	NM_023058	268930	Mm.182193	NM_023058	ENSMUSG00000023908	Pkmyt1	6230424P17|AW209059|Myt1	protein kinase, membrane associated tyrosine/threonine 1	protein-coding	0.140000	0.731343			
ePOU_nocontrol_ChIP_peaks_unique-2911	chr9	76066694	76066894	+	1.71642	NA	intron (NM_173731, intron 3 of 8)	intron (NM_173731, intron 3 of 8)	51817	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding	0.000000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-1925	chr3	69902135	69902335	+	1.71642	NA	Intergenic	Intergenic	-42341	NM_001164210	66183	Mm.45481	NM_133675	ENSMUSG00000043461	Sptssb	1110032A04Rik|ADMP|Sssptb	serine palmitoyltransferase, small subunit B	protein-coding	0.000000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-1892	chr3	53714403	53714603	+	1.71642	NA	Intergenic	Intergenic	-57148	NM_172862	242022	Mm.38378	NM_172862	ENSMUSG00000037016	Frem2	6030440P17Rik|8430406N05Rik|Gm409|b2b1562Clo|my|ne|nv1	Fras1 related extracellular matrix protein 2	protein-coding	0.015000	0.388060		-6(CATTCATATTTATT,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1914	chr3	66040951	66041151	+	1.71642	NA	Intergenic	L1MA7|LINE|L1	-82802	NM_019937	56706	Mm.175612	NM_019937	ENSMUSG00000027829	Ccnl1	2610030E23Rik|AU018493|Ccnl|ania-6a	cyclin L1	protein-coding	0.010000	0.442786		57(ATTGCATATTCAAG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2717	chr8	44268458	44268658	+	1.71642	NA	Intergenic	Intergenic	-569067	NM_001079931	384814	Mm.491652	NM_001079931		Gm5347	EG384814	predicted gene 5347	protein-coding	0.000000	0.228856			
ePOU_nocontrol_ChIP_peaks_unique-2307	chr5	105867746	105867946	+	1.71642	NA	Intergenic	Intergenic	-8722	NR_030777	54367	Mm.248876	NM_018759	ENSMUSG00000029290	Zfp326	5730470H14Rik|ZAN75|Znf326	zinc finger protein 326	protein-coding	0.005000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-1016	chr14	79461630	79461830	+	1.71642	NA	3' UTR (NM_018765, exon 10 of 10)	3' UTR (NM_018765, exon 10 of 10)	9895	NM_001034882	432879	Mm.308666	NM_001034882	ENSMUSG00000075502	Kbtbd6	EG432879|Gm5465|Zbtbd6	kelch repeat and BTB (POZ) domain containing 6	protein-coding	0.000000	0.253731			
ePOU_nocontrol_ChIP_peaks_unique-465	chr11	40155657	40155857	+	1.71642	NA	Intergenic	Intergenic	536925	NM_134017	108645	Mm.293771	NM_134017	ENSMUSG00000042032	Mat2b	1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR	methionine adenosyltransferase II, beta	protein-coding	0.005000	0.308458			
ePOU_nocontrol_ChIP_peaks_unique-1637	chr2	20547737	20547937	+	1.71642	NA	intron (NM_001081006, intron 3 of 21)	intron (NM_001081006, intron 3 of 21)	28324	NM_001177631	208618	Mm.237935	NM_029895	ENSMUSG00000036617	Etl4	6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt	enhancer trap locus 4	protein-coding	0.010000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-1720	chr2	83733643	83733843	+	1.71642	NA	intron (NM_008402, intron 1 of 29)	intron (NM_008402, intron 1 of 29)	9346	NM_008402	16410	Mm.227	NM_008402	ENSMUSG00000027087	Itgav	1110004F14Rik|2610028E01Rik|CD51|D430040G12Rik	integrin alpha V	protein-coding	0.000000	0.328358			
ePOU_nocontrol_ChIP_peaks_unique-1191	chr16	15524053	15524253	+	1.71642	NA	Intergenic	RMER15-int|LTR|ERVL	70365	NM_001159351	70620	Mm.235407	NM_023585	ENSMUSG00000022674	Ube2v2	1110021H13Rik|4632410D19Rik|5730524P06Rik|6820402M05|AI848315|C81524|MMS2	ubiquitin-conjugating enzyme E2 variant 2	protein-coding	0.000000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-2465	chr6	82640312	82640512	+	1.71642	NA	intron (NM_001370295, intron 3 of 3)	L1M5|LINE|L1	12453	NM_025882	66979	Mm.195753	NM_025882	ENSMUSG00000030042	Pole4	2400007P05Rik|5830430F06Rik	polymerase (DNA-directed), epsilon 4 (p12 subunit)	protein-coding	0.005000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-1603	chr19	56344001	56344201	+	1.71642	NA	exon (NM_008733, exon 29 of 42)	exon (NM_008733, exon 29 of 42)	45937	NM_198059	18175	Mm.386769	NM_008733	ENSMUSG00000049134	Nrap	-	nebulin-related anchoring protein	protein-coding	0.035000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-2706	chr8	27686440	27686640	+	1.71642	NA	Intergenic	RMER12C|LTR|ERVK	238870	NM_027618	70952	Mm.158160	NM_026256	ENSMUSG00000063932	Poteg	4921537P18Rik|4930456F22Rik|Gsarp1|Gsarp2	POTE ankyrin domain family, member G	protein-coding	0.000000	0.253731			
ePOU_nocontrol_ChIP_peaks_unique-1152	chr15	89558628	89558828	+	1.71642	NA	3' UTR (NM_021423, exon 22 of 22)	3' UTR (NM_021423, exon 22 of 22)	9477	NR_155423	102640064	Mm.416865	NR_155423		Gm36221	-	predicted gene, 36221	ncRNA	0.035000	0.527363			
ePOU_nocontrol_ChIP_peaks_unique-159	chr1	151153829	151154029	+	1.71642	NA	Intergenic	RLTR13B4|LTR|ERVK	15895	NR_038011	402734	Mm.337666	NR_038011		C730036E19Rik	lncLSTR	RIKEN cDNA C730036E19 gene	ncRNA	0.010000	0.427861	-28(CATGAATAATGCAGT,+,0.00),-28(CATGAATAATGCAGT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-390	chr10	108739362	108739562	+	1.71642	NA	intron (NM_001252342, intron 3 of 10)	intron (NM_001252342, intron 3 of 10)	-39302	NM_203660	368203	Mm.452758	NM_203660	ENSMUSG00000112039	Gm5136	C6.1AL|EG368203	predicted gene 5136	protein-coding	0.005000	0.353234			71(ATTTACAAGACAGAAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-109	chr1	92934543	92934743	+	1.71642	NA	non-coding (NR_015525, exon 2 of 2)	non-coding (NR_015525, exon 2 of 2)	235	NM_011796	23830	Mm.294315	NM_011796	ENSMUSG00000026270	Capn10	AW049679|Capn8|mKIAA1845	calpain 10	protein-coding	0.075000	0.597015			
ePOU_nocontrol_ChIP_peaks_unique-972	chr14	55078153	55078353	+	1.71642	NA	intron (NM_001039198, intron 1 of 9)	intron (NM_001039198, intron 1 of 9)	5162	NR_004444	432855	Mm.490799	NR_004444		Zfhx2os	Zfhx2as	zinc finger homeobox 2, opposite strand	ncRNA	0.030000	0.517413			
ePOU_nocontrol_ChIP_peaks_unique-282	chr10	27488129	27488329	+	1.71642	NA	intron (NM_008481, intron 1 of 63)	intron (NM_008481, intron 1 of 63)	98363	NR_131034	75855	Mm.402080	NR_131034	ENSMUSG00000101636	4930579H20Rik	-	RIKEN cDNA 4930579H20 gene	ncRNA	0.010000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-1317	chr17	20945622	20945822	+	1.71642	NA	intron (NM_016891, intron 1 of 14)	CpG	268	NM_016891	51792	Mm.294138	NM_016891	ENSMUSG00000007564	Ppp2r1a	6330556D22Rik|PP2A|PR65	protein phosphatase 2, regulatory subunit A, alpha	protein-coding	0.080000	0.621891			
ePOU_nocontrol_ChIP_peaks_unique-2537	chr6	142186488	142186688	+	1.71642	NA	promoter-TSS (NM_023718)	promoter-TSS (NM_023718)	-439	NM_023718	28254	Mm.38953	NM_023718	ENSMUSG00000079262	Slco1a6	4930422F19Rik|AI790453|Oatp-5|Oatp5|Slc21a13	solute carrier organic anion transporter family, member 1a6	protein-coding	0.000000	0.407960	-9(ATTGCATTATTCATG,+,0.00),-9(ATTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1416	chr17	93901711	93901911	+	1.71642	NA	Intergenic	Intergenic	702643	NM_001315504	11516	Mm.3407	NM_009625	ENSMUSG00000024256	Adcyap1	PACAP	adenylate cyclase activating polypeptide 1	protein-coding	0.010000	0.363184			-84(ATTAGAATTAAAAAGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2237	chr5	43130623	43130823	+	1.71642	NA	Intergenic	Intergenic	-102530	NM_175937	231207	Mm.7233	NM_175937	ENSMUSG00000039782	Cpeb2	A630055H10Rik|Cpe-bp2	cytoplasmic polyadenylation element binding protein 2	protein-coding	0.005000	0.323383			
ePOU_nocontrol_ChIP_peaks_unique-1096	chr15	41447229	41447429	+	1.71642	NA	promoter-TSS (NM_001130166)	promoter-TSS (NM_001130166)	-153	NM_001358978	170719	Mm.254267	NM_130885	ENSMUSG00000022307	Oxr1	2210416C20Rik|C7|C7B	oxidation resistance 1	protein-coding	0.125000	0.706468			
ePOU_nocontrol_ChIP_peaks_unique-1578	chr19	38819138	38819338	+	1.71642	NA	promoter-TSS (NM_021315)	promoter-TSS (NM_021315)	-1	NM_021315	57753	Mm.86482	NM_021315	ENSMUSG00000024999	Noc3l	AF233884|Fad24	NOC3 like DNA replication regulator	protein-coding	0.090000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-456	chr11	37451453	37451653	+	1.71642	NA	Intergenic	Intergenic	-207436	NR_131154	100039148	Mm.120467	NR_131154	ENSMUSG00000087388	Gm12128	-	predicted gene 12128	ncRNA	0.005000	0.293532			
ePOU_nocontrol_ChIP_peaks_unique-1780	chr2	131180315	131180515	+	1.71642	NA	promoter-TSS (NM_007682)	promoter-TSS (NM_007682)	-348	NM_007682	12616	Mm.440169	NM_007682	ENSMUSG00000068267	Cenpb	CENP-B	centromere protein B	protein-coding	0.025000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-532	chr11	75679248	75679448	+	1.71642	NA	promoter-TSS (NM_001277221)	promoter-TSS (NM_001277221)	89	NM_001277219	12928	Mm.280125	NM_133656	ENSMUSG00000017776	Crk	Crk-I|Crk-II|Crk-III|Crk3|CrkIII|Crko|c-Crk|p38	v-crk avian sarcoma virus CT10 oncogene homolog	protein-coding	0.150000	0.771144			
ePOU_nocontrol_ChIP_peaks_unique-593	chr11	103985175	103985375	+	1.71642	NA	TTS (NM_007477)	TTS (NM_007477)	18404	NM_007477	11841	Mm.5061	NM_007477	ENSMUSG00000062421	Arf2	-	ADP-ribosylation factor 2	protein-coding	0.005000	0.452736			
Oct4_nocontrol_ChIP_peaks_unique-87	chr7	35586005	35586205	+	1.71642	NA	promoter-TSS (NM_178263)	promoter-TSS (NM_178263)	-142	NM_001358876	245886	Mm.272620	NM_145633	ENSMUSG00000034867	Ankrd27	AA408090|BC016493|D330003H11Rik|Varp	ankyrin repeat domain 27 (VPS9 domain)	protein-coding	0.055000	0.567164			
ePOU_nocontrol_ChIP_peaks_unique-1650	chr2	29935324	29935524	+	1.71642	NA	promoter-TSS (NM_028923)	promoter-TSS (NM_028923)	15	NM_028923	74412	Mm.275121	NM_028923	ENSMUSG00000019715	Gle1	4933405K21Rik|AA553313|Gle1l	GLE1 RNA export mediator (yeast)	protein-coding	0.115000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-185	chr1	168319724	168319924	+	1.71642	NA	intron (NM_001291508, intron 2 of 7)	intron (NM_001291508, intron 2 of 7)	112345	NM_183355	18514	Mm.43358	NM_008783	ENSMUSG00000052534	Pbx1	2310056B04Rik|D230003C07Rik|Pbx-1	pre B cell leukemia homeobox 1	protein-coding	0.000000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-2021	chr3	145987965	145988165	+	1.71642	NA	exon (NM_001166064, exon 1 of 7)	exon (NM_001166064, exon 1 of 7)	195	NM_001166064	214804	Mm.268854	NM_001166064	ENSMUSG00000036863	Syde2	C430017H16Rik	synapse defective 1, Rho GTPase, homolog 2 (C. elegans)	protein-coding	0.165000	0.796020			
ePOU_nocontrol_ChIP_peaks_unique-300	chr10	39608094	39608294	+	1.71642	NA	intron (NR_152259, intron 1 of 5)	RLTR13D5|LTR|ERVK	-4740	NM_134000	103213	Mm.436686	NM_134000	ENSMUSG00000019842	Traf3ip2	AI429613|Act1|CIKS	TRAF3 interacting protein 2	protein-coding	0.005000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-1044	chr14	120832349	120832549	+	1.71642	NA	Intergenic	Intergenic	-78745	NM_023579	70572	Mm.221452	NM_023579	ENSMUSG00000030662	Ipo5	1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5|imp5	importin 5	protein-coding	0.020000	0.527363			
ePOU_nocontrol_ChIP_peaks_unique-2548	chr7	7298441	7298641	+	1.71642	NA	promoter-TSS (NR_049193)	promoter-TSS (NR_049193)	295	NM_001302386	12727	Mm.297883	NM_011334	ENSMUSG00000000605	Clcn4	Clc4-2|Clcn4-2|clC-4	chloride channel, voltage-sensitive 4	protein-coding	0.120000	0.776119			
ePOU_nocontrol_ChIP_peaks_unique-635	chr12	4099531	4099731	+	1.71642	NA	intron (NM_153082, intron 5 of 6)	intron (NM_153082, intron 5 of 6)	17057	NM_153082	217378	Mm.271656	NM_153082	ENSMUSG00000020657	Dnajc27	AI639580|C330021A05Rik|Rabj|Rbj	DnaJ heat shock protein family (Hsp40) member C27	protein-coding	0.000000	0.402985			-61(GCTTCCTTATGCAAAT,+,0.00),2(TCATTCATATGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2081	chr4	47995859	47996059	+	1.71642	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	-49346	NM_001307989	18124	Mm.247261	NM_015743	ENSMUSG00000028341	Nr4a3	AI573420|CHN|CSMF|MINOR|NOR-1|Nor1|TEC	nuclear receptor subfamily 4, group A, member 3	protein-coding	0.000000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-2851	chr9	30577013	30577213	+	1.71642	NA	Intergenic	Intergenic	149784	NM_028874	102607	Mm.35084	NM_028874	ENSMUSG00000031993	Snx19	3526401K03Rik|AI195321|AI848208|mKIAA0254	sorting nexin 19	protein-coding	0.005000	0.393035			-43(TCTTTATCATTTTAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-319	chr10	55978457	55978657	+	1.71642	NA	Intergenic	RMER12C|LTR|ERVK	-128360	NM_001163833	73390	Mm.181475	NM_133751	ENSMUSG00000047669	Msl3l2	1700060H10Rik	MSL3 like 2	protein-coding	0.005000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-1754	chr2	116838856	116839056	+	1.71642	NA	Intergenic	Intergenic	-39735	NM_001355572	67356	Mm.131623	NM_026104	ENSMUSG00000027355	Tmco5	1700095F04Rik|Tmco5a	transmembrane and coiled-coil domains 5	protein-coding	0.010000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-955	chr14	40967267	40967467	+	1.71642	NA	promoter-TSS (NM_145928)	promoter-TSS (NM_145928)	-471	NM_145928	52588	Mm.28876	NM_145928	ENSMUSG00000037824	Tspan14	AA958793|D14Ertd226e|Tm4sf14|tspan-14	tetraspanin 14	protein-coding	0.095000	0.606965			
ePOU_nocontrol_ChIP_peaks_unique-419	chr11	8147895	8148095	+	1.71642	NA	Intergenic	MLT1E1A-int|LTR|ERVL-MaLR	516540	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding	0.010000	0.417910			6(ACATTCTCATGCATAC,+,0.00)
Oct4_nocontrol_ChIP_peaks_unique-67	chr4	97065170	97065370	+	1.71642	NA	Intergenic	Intergenic	-280110	NM_001081284	620779	Mm.439625	NM_001081284	ENSMUSG00000078639	Gm12695	-	predicted gene 12695	protein-coding	0.020000	0.378109			
merged_common-143	chr2	81440939	81441139	+	1.71642	NA	Intergenic	RMER5|LTR|ERV1	-612619	NM_175513	241514	Mm.119383	NM_175513	ENSMUSG00000070866	Zfp804a	C630007C17Rik|Znf804a	zinc finger protein 804A	protein-coding	0.000000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-2941	chr9	107338226	107338426	+	1.71642	NA	promoter-TSS (NM_133984)	promoter-TSS (NM_133984)	24	NM_133984	69536	Mm.259467	NM_133984	ENSMUSG00000032579	Hemk1	2310008M14Rik|AW049265	HemK methyltransferase family member 1	protein-coding	0.065000	0.616915			
ePOU_nocontrol_ChIP_peaks_unique-25	chr1	22889130	22889330	+	1.71642	NA	Intergenic	Intergenic	-9157	NR_151543	665725	Mm.416993	NR_151543		Gm7759	EG665725	predicted gene 7759	ncRNA	0.000000	0.318408		-17(TATGCATATAGATT,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2337	chr5	123524116	123524316	+	1.71642	NA	promoter-TSS (NM_023232)	promoter-TSS (NM_023232)	-52	NM_023232	66593	Mm.46716	NM_023232	ENSMUSG00000029433	Diablo	0610041G12Rik|1700006L01Rik|AU040403|Smac	diablo, IAP-binding mitochondrial protein	protein-coding	0.125000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-2993	chrX	104200002	104200202	+	1.71642	NA	intron (NM_001077354, intron 1 of 4)	CpG	1082	NM_001077354	245555	Mm.381907	NM_001077354	ENSMUSG00000046449	Nexmif	A230051P11|C77370|C77386|KIDLIA|Xpn	neurite extension and migration factor	protein-coding	0.140000	0.751244			
ePOU_nocontrol_ChIP_peaks_unique-583	chr11	101658660	101658860	+	1.71642	NA	Intergenic	B1_Mus1|SINE|Alu	-6781	NM_025404	80981	Mm.266840	NM_025404	ENSMUSG00000034936	Arl4d	1110036H21Rik|ARL6|AW456149|Arf4l|Arfl4|Arl5	ADP-ribosylation factor-like 4D	protein-coding	0.015000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-1284	chr16	85765860	85766060	+	1.71642	NA	Intergenic	Intergenic	37153	NM_009621	11504	Mm.1421	NM_009621	ENSMUSG00000022893	Adamts1	ADAM-TS1|ADAMTS|ADAMTS-1|C3-C5|METH-1|METH1	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1	protein-coding	0.025000	0.492537			
merged_common-78	chr13	81889960	81890160	+	1.71642	NA	Intergenic	Intergenic	106813	NM_007684	12626	Mm.12481	NM_007684	ENSMUSG00000021537	Cetn3	MmCEN3	centrin 3	protein-coding	0.005000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-998	chr14	68029199	68029399	+	1.71642	NA	Intergenic	Intergenic	-54564	NM_010910	18039	Mm.1956	NM_010910	ENSMUSG00000022055	Nefl	AI847934|CMT2E|NF-L|NF68|Nfl	neurofilament, light polypeptide	protein-coding	0.005000	0.378109	-35(TATGAATAATGCATT,+,0.00),-35(TATGAATAATGCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-816	chr13	34148845	34149045	+	1.71642	NA	Intergenic	Intergenic	-14019	NM_001101430	69666	Mm.24788	NM_001101430	ENSMUSG00000071451	Psmg4	PAC-4|mPAC4	proteasome (prosome, macropain) assembly chaperone 4	protein-coding	0.040000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-116	chr1	98025628	98025828	+	1.71642	NA	intron (NM_001357127, intron 1 of 25)	intron (NM_001357127, intron 1 of 25)	22065	NR_037993	78603	Mm.442597	NR_037993	ENSMUSG00000089706	B230216N24Rik	-	RIKEN cDNA B230216N24 gene	ncRNA	0.010000	0.328358			
ePOU_nocontrol_ChIP_peaks_unique-336	chr10	68525696	68525896	+	1.71642	NA	intron (NM_028491, intron 2 of 7)	intron (NM_028491, intron 2 of 7)	16079	NM_028491	73287	Mm.141830	NM_028491	ENSMUSG00000019945	Cabcoco1	1700040L02Rik	ciliary associated calcium binding coiled-coil 1	protein-coding	0.025000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-507	chr11	65771785	65771985	+	1.71642	NA	intron (NM_009157, intron 1 of 10)	intron (NM_009157, intron 1 of 10)	16474	NM_001316369	26398	Mm.412922	NM_009157	ENSMUSG00000033352	Map2k4	JNKK1|MAPKK 4|MEK4|MKK4|PRKMK4|Sek1|Serk1	mitogen-activated protein kinase kinase 4	protein-coding	0.005000	0.338308			-79(CTATTGCTATGCAAAC,+,0.00),-65(ACATTCTCAAGCAAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-218	chr1	183517388	183517588	+	1.71642	NA	Intergenic	Intergenic	98240	NM_001308052	78772	Mm.29003	NM_030175	ENSMUSG00000053461	Hhipl2	4930507C10Rik|AW208802|Hhip3	hedgehog interacting protein-like 2	protein-coding	0.015000	0.417910			-58(TCTGTGTCATTGAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-928	chr14	19750768	19750968	+	1.71642	NA	promoter-TSS (NM_008695)	promoter-TSS (NM_008695)	-389	NM_008695	18074	Mm.20348	NM_008695	ENSMUSG00000021806	Nid2	AW547149|Ly111|NID-2|entactin-2|nidogen-2	nidogen 2	protein-coding	0.050000	0.611940			
ePOU_nocontrol_ChIP_peaks_unique-769	chr12	112320093	112320293	+	1.71642	NA	Intergenic	Intergenic	103005	NR_036459	100504733	Mm.255309	NM_176956	ENSMUSG00000047828	A730018C14Rik	-	RIKEN cDNA A730018C14 gene	ncRNA	0.005000	0.467662	14(AATGCATTATTCATG,+,0.00),14(AATGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1686	chr2	58505800	58506000	+	1.71642	NA	intron (NM_001355048, intron 2 of 10)	intron (NM_001355048, intron 2 of 10)	55510	NM_001355049	11477	Mm.689	NM_007394	ENSMUSG00000026836	Acvr1	ALK2|ActR-I|ActRIA|Acvr|Acvr1a|Acvrlk2|Alk-2|Alk8|D330013D15Rik|SKR1|Tsk7L	activin A receptor, type 1	protein-coding	0.005000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-1573	chr19	37488824	37489024	+	1.71642	NA	Intergenic	Intergenic	23670	NR_131008	78640	Mm.234265	NR_131008	ENSMUSG00000117800	1700122C19Rik	-	RIKEN cDNA 1700122C19 gene	ncRNA	0.020000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-2380	chr5	149636345	149636545	+	1.71642	NA	promoter-TSS (NM_001347534)	promoter-TSS (NM_001347534)	-109	NM_001347534	15505	Mm.270681	NM_013559	ENSMUSG00000029657	Hsph1	105kDa|AI790491|Hsp105|Hsp110|hsp-E7I|hsp110/105	heat shock 105kDa/110kDa protein 1	protein-coding	0.065000	0.606965			
ePOU_nocontrol_ChIP_peaks_unique-1430	chr18	16649416	16649616	+	1.71642	NA	intron (NM_007664, intron 3 of 15)	intron (NM_007664, intron 3 of 15)	159730	NM_007664	12558	Mm.257437	NM_007664	ENSMUSG00000024304	Cdh2	CDHN|N-CAD|Ncad	cadherin 2	protein-coding	0.005000	0.303483		-32(TTTGAATATGTATA,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1038	chr14	115947841	115948041	+	1.71642	NA	intron (NM_175500, intron 7 of 7)	intron (NM_175500, intron 7 of 7)	-538389	NR_045761	75088	Mm.444706	NR_045761	ENSMUSG00000093551	4930505G20Rik	-	RIKEN cDNA 4930505G20 gene	ncRNA	0.000000	0.328358			-62(TCAGTGTTATGCAGAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2581	chr7	45016168	45016368	+	1.71642	NA	promoter-TSS (NM_001008422)	promoter-TSS (NM_001008422)	-19	NM_001008422	233208	Mm.28298	NM_001008422	ENSMUSG00000038406	Scaf1	AI480556|SR-A1	SR-related CTD-associated factor 1	protein-coding	0.100000	0.621891			
ePOU_nocontrol_ChIP_peaks_unique-1884	chr3	50422121	50422321	+	1.71642	NA	intron (NM_011990, intron 5 of 11)	intron (NM_011990, intron 5 of 11)	21392	NM_011990	26570	Mm.260988	NM_011990	ENSMUSG00000027737	Slc7a11	9930009M05Rik|AI451155|sut|xCT	solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	protein-coding	0.010000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-65	chr1	58795431	58795631	+	1.71642	NA	5' UTR (NM_009812, exon 1 of 9)	5' UTR (NM_009812, exon 1 of 9)	157	NM_009812	12370	Mm.336851	NM_009812	ENSMUSG00000026029	Casp8	CASP-8|FLICE|MACH|Mch5	caspase 8	protein-coding	0.035000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-1841	chr2	181186892	181187092	+	1.71642	NA	promoter-TSS (NM_025598)	promoter-TSS (NM_025598)	170	NR_151465	66496	Mm.213943	NM_025598	ENSMUSG00000016344	Ppdpf	0610012G23Rik|2610317A05Rik|2700038C09Rik|3110053G12Rik	pancreatic progenitor cell differentiation and proliferation factor	protein-coding	0.035000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-2592	chr7	62026712	62026912	+	1.71642	NA	Intergenic	RLTR13G|LTR|ERVK	19436	NR_037288	100526527		NR_037288	ENSMUSG00000093108	Mir344f	mir-344f|mmu-mir-344f	microRNA Mir344f	ncRNA	0.010000	0.368159			36(ATTAGCATTATAAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1328	chr17	25015979	25016179	+	1.71642	NA	promoter-TSS (NM_020608)	promoter-TSS (NM_020608)	-7	NM_134126	106633	Mm.32802	NM_134126	ENSMUSG00000024169	Ift140	AI661311|Tce5|Wdtc2|mKIAA0590	intraflagellar transport 140	protein-coding	0.080000	0.547264			
merged_common-40	chr11	59809902	59810102	+	1.71642	NA	promoter-TSS (NM_001271356)	promoter-TSS (NM_001271356)	37	NR_073164	216805	Mm.339640	NM_146018	ENSMUSG00000032633	Flcn	AU014660|B430214A04Rik|Bhd|FLCL	folliculin	protein-coding	0.110000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-2088	chr4	56411320	56411520	+	1.71642	NA	Intergenic	Intergenic	330005	NM_025271	11471	Mm.251434	NM_025271	ENSMUSG00000070980	Actl7b	Gm26657|Tact1	actin-like 7b	protein-coding	0.000000	0.412935			4(ATTTGTAAAACAAATG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2033	chr3	153204051	153204251	+	1.71642	NA	3' UTR (NM_011372, exon 5 of 5)	3' UTR (NM_011372, exon 5 of 5)	-52043	NR_108044	75001		NR_108044		4930482G09Rik	-	RIKEN cDNA 4930482G09 gene	ncRNA	0.015000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-2930	chr9	94608892	94609092	+	1.71642	NA	Intergenic	RLTR11A|LTR|ERVK	-60900	NM_177909	331004	Mm.326125	NM_177909	ENSMUSG00000031129	Slc9a9	5730527A11Rik|9930105B05|AI854429|Nhe9	solute carrier family 9 (sodium/hydrogen exchanger), member 9	protein-coding	0.010000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-688	chr12	54302636	54302836	+	1.71642	NA	Intergenic	Intergenic	69121	NR_108033	73592	Mm.416874	NR_108033	ENSMUSG00000112821	1700104L18Rik	-	RIKEN cDNA 1700104L18 gene	ncRNA	0.020000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-143	chr1	134093251	134093451	+	1.71642	NA	Intergenic	Intergenic	-14196	NM_007570	12227	Mm.392646	NM_007570	ENSMUSG00000020423	Btg2	AA959598|APRO1|Pc3|TIS21	B cell translocation gene 2, anti-proliferative	protein-coding	0.025000	0.597015			
ePOU_nocontrol_ChIP_peaks_unique-1150	chr15	88828551	88828751	+	1.71642	NA	Intergenic	Intergenic	9005	NM_029720	76737	Mm.292567	NM_029720	ENSMUSG00000023272	Creld2	5730592L21Rik|C85758	cysteine-rich with EGF-like domains 2	protein-coding	0.020000	0.512438			
ePOU_nocontrol_ChIP_peaks_unique-2609	chr7	80092355	80092555	+	1.71642	NA	3' UTR (NM_001145999, exon 5 of 5)	3' UTR (NM_001145999, exon 5 of 5)	-17198	NR_045695	100859962	Mm.392575	NR_045695	ENSMUSG00000108714	Gm21057	-	predicted gene, 21057	ncRNA	0.015000	0.621891			
Oct4_nocontrol_ChIP_peaks_unique-98	chr8	98118499	98118699	+	1.71642	NA	Intergenic	Intergenic	-893288	NR_110579	100873092	Mm.414599	NR_110579	ENSMUSG00000089819	Gm15679	-	predicted gene 15679	ncRNA	0.000000	0.298507			
ePOU_nocontrol_ChIP_peaks_unique-1260	chr16	63237192	63237392	+	1.71642	NA	Intergenic	Intergenic	382985	NM_011173	19128	Mm.127156	NM_011173	ENSMUSG00000022912	Pros1	AW214361	protein S (alpha)	protein-coding	0.000000	0.318408			-82(TTTTTCTTTTGTAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1385	chr17	75936807	75937007	+	1.71642	NA	Intergenic	Intergenic	75884	NR_033456	100043885	Mm.127562	NR_033456	ENSMUSG00000117539	Gm4710	-	predicted gene 4710	ncRNA	0.000000	0.368159			-56(ATTTACAGAACAATGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1964	chr3	98339653	98339853	+	1.71642	NA	exon (NM_016966, exon 1 of 12)	exon (NM_016966, exon 1 of 12)	216	NM_016966	236539	Mm.16898	NM_016966	ENSMUSG00000053398	Phgdh	3-PGDH|3PGDH|4930479N23|A10|PGAD|PGD|PGDH|SERA	3-phosphoglycerate dehydrogenase	protein-coding	0.035000	0.547264			
ePOU_nocontrol_ChIP_peaks_unique-2925	chr9	92322973	92323173	+	1.71642	NA	intron (NM_001033184, intron 1 of 6)	intron (NM_001033184, intron 1 of 6)	13696	NM_001033184	78459	Mm.179195	NM_001033184	ENSMUSG00000074139	1700057G04Rik	-	RIKEN cDNA 1700057G04 gene	protein-coding	0.000000	0.248756			41(ATTTGAAAGATAATAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1214	chr16	31055863	31056063	+	1.71642	NA	intron (NM_198626, intron 1 of 3)	RLTR12B|LTR|ERVK	25469	NM_198626	268880	Mm.286693	NM_198626	ENSMUSG00000047434	Xxylt1	AI480653	xyloside xylosyltransferase 1	protein-coding	0.010000	0.378109			18(CTTGTGTTATTCAAAT,+,0.00),76(GCATTATAATGCTTAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2041	chr3	156242956	156243156	+	1.71642	NA	Intergenic	Intergenic	266702	NR_040553	329780	Mm.119000	NR_040553	ENSMUSG00000104553	9330178D15Rik	9330178D15	RIKEN cDNA 9330178D15 gene	ncRNA	0.000000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-2978	chrX	36807927	36808127	+	1.71642	NA	Intergenic	CpG	9173	NR_131979	69591	Mm.482947	NR_131979	ENSMUSG00000097468	Mdrl	2310010G23Rik	mitochondrial dynamic related lncRNA	ncRNA	0.090000	0.616915			
ePOU_nocontrol_ChIP_peaks_unique-49	chr1	50965312	50965512	+	1.71642	NA	intron (NM_019790, intron 4 of 9)	intron (NM_019790, intron 4 of 9)	37889	NM_019790	56363	Mm.245154	NM_019790	ENSMUSG00000026109	Tmeff2	4832418D20Rik|7630402F16Rik|TR-2	transmembrane protein with EGF-like and two follistatin-like domains 2	protein-coding	0.010000	0.343284			-15(CTTCTGTTATTCATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1219	chr16	32745684	32745884	+	1.71642	NA	intron (NM_080457, intron 1 of 26)	intron (NM_080457, intron 1 of 26)	9898	NM_080457	140474	Mm.214599	NM_080457	ENSMUSG00000079620	Muc4	4933405I11Rik|Asgp	mucin 4	protein-coding	0.015000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-2598	chr7	69809172	69809372	+	1.71642	NA	Intergenic	Intergenic	313178	NR_045940	73796	Mm.410832	NR_045940	ENSMUSG00000108885	4930402F11Rik	-	RIKEN cDNA 4930402F11 gene	ncRNA	0.010000	0.293532			
ePOU_nocontrol_ChIP_peaks_unique-2647	chr7	112416785	112416985	+	1.71642	NA	Intergenic	Intergenic	-10821	NM_020606	57342	Mm.143763	NM_020606	ENSMUSG00000030770	Parva	2010012A22Rik|5430400F08Rik|AI225929|AU042898|Actp|CH-ILKBP|Parvin	parvin, alpha	protein-coding	0.005000	0.512438			
ePOU_nocontrol_ChIP_peaks_unique-1316	chr17	16157793	16157993	+	1.71642	NA	Intergenic	Intergenic	-331307	NM_178615	68799	Mm.293466	NM_178615	ENSMUSG00000048027	Rgmb	1110059F19Rik|DRAGON	repulsive guidance molecule family member B	protein-coding	0.020000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-1298	chr16	96778894	96779094	+	1.71642	NA	intron (NM_031174, intron 10 of 32)	intron (NM_031174, intron 10 of 32)	311388	NM_008791	18546	Mm.5023	NM_008791	ENSMUSG00000090223	Pcp4	P16Rimb19|Pcp-4|Pep19	Purkinje cell protein 4	protein-coding	0.000000	0.313433			45(ATTTGAATAACATTAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2492	chr6	101427479	101427679	+	1.71642	NA	Intergenic	Intergenic	-49682	NM_018884	55983	Mm.321654	NM_018884	ENSMUSG00000035357	Pdzrn3	1110020C07Rik|AI429718|AL023082|LNX3|SEMACAP3|Semcap3	PDZ domain containing RING finger 3	protein-coding	0.000000	0.492537			
ePOU_nocontrol_ChIP_peaks_unique-2024	chr3	147298225	147298425	+	1.71642	NA	Intergenic	MTE-int|LTR|ERVL-MaLR	445958	NM_001357217	70892	Mm.187793	NM_027594	ENSMUSG00000036745	Ttll7	1110049N09Rik|4921517B04Rik|C630030B20|mTTLL7	tubulin tyrosine ligase-like family, member 7	protein-coding	0.035000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-2008	chr3	132683988	132684188	+	1.71642	NA	promoter-TSS (NM_001163455)	promoter-TSS (NM_001163455)	-56	NM_001163455	271981	Mm.257864	NM_173032	ENSMUSG00000028030	Tbck	1700120J03Rik|9430001M19|A630047E20Rik|C030007I09Rik|Tbckl	TBC1 domain containing kinase	protein-coding	0.075000	0.636816			
ePOU_nocontrol_ChIP_peaks_unique-1098	chr15	43282593	43282793	+	1.71642	NA	promoter-TSS (NM_008388)	promoter-TSS (NM_008388)	43	NM_008388	16341	Mm.289992	NM_008388	ENSMUSG00000022336	Eif3e	48kDa|Eif3s6|Int6|eIF3-p46|eIF3-p48	eukaryotic translation initiation factor 3, subunit E	protein-coding	0.075000	0.572139			
ePOU_nocontrol_ChIP_peaks_unique-1801	chr2	142818064	142818264	+	1.71642	NA	intron (NM_001355123, intron 12 of 26)	intron (NM_001355123, intron 12 of 26)	83300	NM_001355123	16558	Mm.251934	NM_001081133	ENSMUSG00000038844	Kif16b	8430434E15Rik|AA623607|AI789011|C80253|C80902|mKIAA1590	kinesin family member 16B	protein-coding	0.000000	0.233831			
ePOU_nocontrol_ChIP_peaks_unique-2010	chr3	141098127	141098327	+	1.71642	NA	Intergenic	Intergenic	114128	NM_008811	18598	Mm.4223	NM_008811	ENSMUSG00000047674	Pdha2	Pdhal	pyruvate dehydrogenase E1 alpha 2	protein-coding	0.005000	0.283582			
ePOU_nocontrol_ChIP_peaks_unique-879	chr13	94257866	94258066	+	1.71642	NA	intron (NM_001346609, intron 1 of 8)	RSINE1|SINE|B4	27315	NM_029153	107767	Mm.201455	NM_029153	ENSMUSG00000021687	Scamp1	4930505M11Rik|AI415563|AW122395	secretory carrier membrane protein 1	protein-coding	0.005000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-2542	chr6	146478998	146479198	+	1.71642	NA	intron (NM_019923, intron 1 of 56)	intron (NM_019923, intron 1 of 56)	23125	NM_010586	16439	Mm.7800	NM_010586	ENSMUSG00000030287	Itpr2	AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2	inositol 1,4,5-triphosphate receptor 2	protein-coding	0.010000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-657	chr12	27641531	27641731	+	1.71642	NA	Intergenic	Intergenic	-298913	NM_009234	20666	Mm.41702	NM_009234	ENSMUSG00000063632	Sox11	1110038H03Rik|6230403H02Rik|AI836553|end1	SRY (sex determining region Y)-box 11	protein-coding	0.005000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-2535	chr6	139824377	139824577	+	1.71642	NA	intron (NM_207683, intron 17 of 31)	intron (NM_207683, intron 17 of 31)	-16968	NM_011084	18705	Mm.333471	NM_011084	ENSMUSG00000030228	Pik3c2g	C80387|PI3K-C2-gamma	phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma	protein-coding	0.010000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-1321	chr17	22355782	22355982	+	1.71642	NA	intron (NM_001355280, intron 3 of 6)	L1_Mur3|LINE|L1	5518	NM_176962	319615	Mm.442162	NM_176962	ENSMUSG00000033972	Zfp944	6330416L07Rik	zinc finger protein 944	protein-coding	0.000000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-2527	chr6	136808080	136808280	+	1.71642	NA	promoter-TSS (NM_177688)	promoter-TSS (NM_177688)	-68	NM_177688	232440	Mm.154564	NM_177688	ENSMUSG00000060032	H2afj	E130307C13	H2A histone family, member J	protein-coding	0.045000	0.547264			
ePOU_nocontrol_ChIP_peaks_unique-1496	chr18	72062906	72063106	+	1.71642	NA	intron (NM_007831, intron 1 of 28)	intron (NM_007831, intron 1 of 28)	288063	NM_007831	13176	Mm.167882	NM_007831	ENSMUSG00000060534	Dcc	C030036D22Rik|Igdcc1	deleted in colorectal carcinoma	protein-coding	0.005000	0.278607	55(TATGCATAATGCATT,+,0.00),55(TATGCATAATGCATT,-,0.00)	-75(TATGAATATTAATA,+,0.00),-75(TATGAATATTAATA,-,0.00)	-33(ATTAATATGATAATAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2963	chr9	121393283	121393483	+	1.71642	NA	intron (NM_001357970, intron 2 of 15)	B3|SINE|B2	-10063	NM_001357968	67095	Mm.491112	NM_175114	ENSMUSG00000032536	Trak1	2310001H13Rik|AI413908|AI467545|hyrt|mKIAA1042	trafficking protein, kinesin binding 1	protein-coding	0.010000	0.373134		39(AATACATATCCATG,-,0.00),62(TTTGCATATTCATG,+,0.00),62(TTTGCATATTCATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1182	chr16	8513288	8513488	+	1.71642	NA	promoter-TSS (NM_001170978)	promoter-TSS (NM_001170978)	-41	NM_172961	268860	Mm.259315	NM_172961	ENSMUSG00000057880	Abat	9630038C02Rik|AI255750|Gabaat|Gabat|Gm9851|I54|Laibat|X61497	4-aminobutyrate aminotransferase	protein-coding	0.070000	0.706468			
ePOU_nocontrol_ChIP_peaks_unique-1014	chr14	77315239	77315439	+	1.71642	NA	intron (NM_172813, intron 3 of 18)	L1MDa|LINE|L1	158576	NM_172813	239188	Mm.441158	NM_172813	ENSMUSG00000022012	Enox1	B230207J08|D230005D02Rik	ecto-NOX disulfide-thiol exchanger 1	protein-coding	0.010000	0.358209			-88(CTGTCCAAGACAATGA,-,0.00),-54(TTTTACATGAGAATGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2725	chr8	47974230	47974430	+	1.71642	NA	intron (NM_133791, intron 1 of 22)	intron (NM_133791, intron 1 of 22)	16214	NM_133791	52357	Mm.235074	NM_133791	ENSMUSG00000031563	Wwc2	5330431C14Rik|AU022508|C85457|D8Ertd594e	WW, C2 and coiled-coil domain containing 2	protein-coding	0.020000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-571	chr11	96696752	96696952	+	1.71642	NA	intron (NM_001033186, intron 4 of 12)	intron (NM_001033186, intron 4 of 12)	80703	NM_028965	74479	Mm.270781	NM_028965	ENSMUSG00000020876	Snx11	4933439F10Rik|A930041K09Rik|AI117694	sorting nexin 11	protein-coding	0.005000	0.393035			-66(CTTTTGTGATTCAGAC,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1975	chr3	105450822	105451022	+	1.71642	NA	promoter-TSS (NM_001039347)	promoter-TSS (NM_001039347)	-968	NM_001039347	56543	Mm.44530	NM_019931	ENSMUSG00000040896	Kcnd3	AW045978|Kncd3|Kv4.3	potassium voltage-gated channel, Shal-related family, member 3	protein-coding	0.010000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-1265	chr16	67745227	67745427	+	1.71642	NA	Intergenic	L1ME3B|LINE|L1	-124419	NM_178721	239857	Mm.394300	NM_178721	ENSMUSG00000064115	Cadm2	2900078E11Rik|9330131D06|A830029E02Rik|Igdf4d|Igsf4d|NECL3|SynCAM 2|SynCAM2	cell adhesion molecule 2	protein-coding	0.005000	0.263682			
ePOU_nocontrol_ChIP_peaks_unique-1786	chr2	134643825	134644025	+	1.71642	NA	exon (NM_029148, exon 1 of 8)	exon (NM_029148, exon 1 of 8)	196	NM_029148	52837	Mm.264096	NM_029148	ENSMUSG00000034723	Tmx4	2810417D04Rik|4930500L08Rik|AI843224|AW046784|D2Bwg1356e|Txndc13|mKIAA1162	thioredoxin-related transmembrane protein 4	protein-coding	0.090000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-1856	chr3	25145064	25145264	+	1.71642	NA	Intergenic	Intergenic	-361158	NM_001326288	635702	Mm.448351	NM_001326288	ENSMUSG00000102758	Naaladl2	2810043G22Rik|EG635702|Gm1021	N-acetylated alpha-linked acidic dipeptidase-like 2	protein-coding	0.025000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-619	chr11	117617867	117618067	+	1.71642	NA	Intergenic	Intergenic	6720	NR_015489	78403	Mm.212543	NR_015489		2900041M22Rik	-	RIKEN cDNA 2900041M22 gene	ncRNA	0.035000	0.492537			
ePOU_nocontrol_ChIP_peaks_unique-2586	chr7	47050538	47050738	+	1.71642	NA	promoter-TSS (NM_026436)	promoter-TSS (NM_026436)	-2	NM_026436	67893	Mm.27338	NM_026436	ENSMUSG00000010307	Tmem86a	1810054O13Rik|AI414959|AW742698	transmembrane protein 86A	protein-coding	0.090000	0.656716			
Oct4_nocontrol_ChIP_peaks_unique-9	chr1	178406124	178406324	+	1.71642	NA	intron (NM_026626, intron 1 of 6)	CpG	206	NM_026626	68226	Mm.252132	NM_026626	ENSMUSG00000026495	Efcab2	1700073K01Rik|D830011E08Rik	EF-hand calcium binding domain 2	protein-coding	0.105000	0.716418			
ePOU_nocontrol_ChIP_peaks_unique-711	chr12	76388836	76389036	+	1.71642	NA	TTS (NM_178744)	TTS (NM_178744)	-15240	NM_001002012	15512	Mm.296181	NM_008301	ENSMUSG00000059970	Hspa2	70kDa|HSP70.2|HSP70A2|Hsp70-2	heat shock protein 2	protein-coding	0.030000	0.462687			-36(ATTTTCTCATGCTATT,+,0.00),-23(ATTTGCATAAAAGCAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-570	chr11	96065412	96065612	+	1.71642	NA	promoter-TSS (NM_172300)	promoter-TSS (NM_172300)	-148	NM_172300	268470	Mm.38802	NM_172300	ENSMUSG00000014349	Ube2z	AW049199|C030047H17Rik|D11Moh35	ubiquitin-conjugating enzyme E2Z	protein-coding	0.070000	0.621891			
merged_common-230	chr8	103814292	103814492	+	1.71642	NA	Intergenic	MER121|DNA|TcMar?	210593	NR_045730	71058	Mm.67707	NR_045730	ENSMUSG00000110336	4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA	0.020000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-2330	chr5	118809704	118809904	+	1.71642	NA	Intergenic	Intergenic	-142535	NR_040694	74627	Mm.410828	NR_040694	ENSMUSG00000107144	4930413E15Rik	-	RIKEN cDNA 4930413E15 gene	ncRNA	0.000000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-463	chr11	38216996	38217196	+	1.71642	NA	Intergenic	Intergenic	302949	NR_040295	100502917	Mm.61144	NR_040295		Gm12130	-	predicted gene 12130	ncRNA	0.005000	0.298507			5(ATTTACAAAACAAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1635	chr2	19579767	19579967	+	1.71642	NA	Intergenic	Intergenic	-25957	NM_027600	70909	Mm.158488	NM_027600	ENSMUSG00000026734	4921504E06Rik	4921522E24Rik	RIKEN cDNA 4921504E06 gene	protein-coding	0.000000	0.373134			
Oct4_nocontrol_ChIP_peaks_unique-15	chr10	81293048	81293248	+	1.71642	NA	exon (NM_001146687, exon 1 of 17)	exon (NM_001146687, exon 1 of 17)	185	NM_001293647	18717	Mm.24222	NM_008844	ENSMUSG00000034902	Pip5k1c	AI115456|AI835305|Pip5kIgamma	phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma	protein-coding	0.145000	0.736318			
ePOU_nocontrol_ChIP_peaks_unique-1908	chr3	65435253	65435453	+	1.71642	NA	Intergenic	Intergenic	-42800	NM_026155	67437	Mm.232728	NM_026155	ENSMUSG00000027828	Ssr3	0610038P07Rik|AL022999|AU022074|AW553833|TRAPG	signal sequence receptor, gamma	protein-coding	0.020000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-1666	chr2	35321073	35321273	+	1.71642	NA	intron (NM_013515, intron 5 of 6)	intron (NM_013515, intron 5 of 6)	15836	NM_013515	13830	Mm.295284	NM_013515	ENSMUSG00000026880	Stom	Epb7.2	stomatin	protein-coding	0.000000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-346	chr10	79780178	79780378	+	1.71642	NA	intron (NM_031380, intron 3 of 4)	intron (NM_031380, intron 3 of 4)	3004	NM_031380	83554	Mm.251710	NM_031380	ENSMUSG00000020325	Fstl3	E030038F23Rik|Flrg	follistatin-like 3	protein-coding	0.045000	0.661692			
ePOU_nocontrol_ChIP_peaks_unique-510	chr11	67052586	67052786	+	1.71642	NA	promoter-TSS (NM_025510)	promoter-TSS (NM_025510)	16	NM_001040026	52892	Mm.129731	NM_001040026	ENSMUSG00000069844	Sco1	2610001C07Rik|D11Bwg1310e	SCO1 cytochrome c oxidase assembly protein	protein-coding	0.085000	0.636816			
ePOU_nocontrol_ChIP_peaks_unique-2450	chr6	62944549	62944749	+	1.71642	NA	Intergenic	Intergenic	-311357	NM_001370966									0.000000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-834	chr13	51645028	51645228	+	1.71642	NA	promoter-TSS (NM_025415)	promoter-TSS (NM_025415)	-104	NM_025415	66197	Mm.222228	NM_025415	ENSMUSG00000062248	Cks2	1110038L14Rik|CKSHS2	CDC28 protein kinase regulatory subunit 2	protein-coding	0.090000	0.601990			
merged_common-192	chr5	66853941	66854141	+	1.71642	NA	intron (NM_001001980, intron 1 of 25)	intron (NM_001001980, intron 1 of 25)	-3428	NM_001368863	77569	Mm.374778	NM_001001980	ENSMUSG00000037736	Limch1	3732412D22Rik|mKIAA1102	LIM and calponin homology domains 1	protein-coding	0.015000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-1769	chr2	128125890	128126090	+	1.71642	NA	promoter-TSS (NM_001291016)	promoter-TSS (NM_001291016)	-48	NM_207681	12125	Mm.141083	NM_009754	ENSMUSG00000027381	Bcl2l11	1500006F24Rik|Bim|Bod|bcl2-L-11	BCL2-like 11 (apoptosis facilitator)	protein-coding	0.090000	0.711443			
ePOU_nocontrol_ChIP_peaks_unique-2444	chr6	59250814	59251014	+	1.71642	NA	Intergenic	Lx9|LINE|L1	42044	NM_001081145	68140	Mm.25843	NM_001081145	ENSMUSG00000049232	Tigd2	3632410O17Rik	tigger transposable element derived 2	protein-coding	0.000000	0.388060			
Oct4_nocontrol_ChIP_peaks_unique-64	chr4	27946402	27946602	+	1.71642	NA	Intergenic	Intergenic	-866629	NM_001290434	13841	Mm.257266	NM_010141	ENSMUSG00000028289	Epha7	Cek11|Ebk|Ehk3|Hek11|Mdk1	Eph receptor A7	protein-coding	0.005000	0.313433			-37(GAATAGTCATACAAAT,+,0.00),-20(CTGTGCATGCCAATGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1620	chr2	6213299	6213499	+	1.71642	NA	promoter-TSS (NM_024208)	promoter-TSS (NM_024208)	-405	NM_024208	67856	Mm.38342	NM_024208	ENSMUSG00000039063	Echdc3	2310005D12Rik|AI662097	enoyl Coenzyme A hydratase domain containing 3	protein-coding	0.040000	0.512438			
ePOU_nocontrol_ChIP_peaks_unique-642	chr12	8673896	8674096	+	1.71642	NA	promoter-TSS (NM_001160219)	promoter-TSS (NM_001160219)	-138	NM_001160222	80913	Mm.341243	NM_030723	ENSMUSG00000020594	Pum2	5730503J23Rik|Pumm2	pumilio RNA-binding family member 2	protein-coding	0.100000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-1227	chr16	33770284	33770484	+	1.71642	NA	Intergenic	Intergenic	-23653	NM_010739	17063	Mm.3177	NM_010739	ENSMUSG00000022824	Muc13	114/A10|14/A10|AI159736|Lrrp|Ly64|NJ-1	mucin 13, epithelial transmembrane	protein-coding	0.000000	0.328358			
ePOU_nocontrol_ChIP_peaks_unique-2774	chr8	86158842	86159042	+	1.71642	NA	Intergenic	Intergenic	317954	NM_199446	102093	Mm.237296	NM_199446	ENSMUSG00000036879	Phkb	AI463271	phosphorylase kinase beta	protein-coding	0.005000	0.243781			
ePOU_nocontrol_ChIP_peaks_unique-2138	chr4	108320777	108320977	+	1.71642	NA	Intergenic	Intergenic	-7275	NM_027250	69893	Mm.28354	NM_027250	ENSMUSG00000048351	Coa7	2010305A19Rik|AI451324|D4Ertd796e|Selrc1	cytochrome c oxidase assembly factor 7	protein-coding	0.010000	0.537313			
ePOU_nocontrol_ChIP_peaks_unique-849	chr13	64215569	64215769	+	1.71642	NA	exon (NM_172587, exon 9 of 14)	exon (NM_172587, exon 9 of 14)	32869	NM_001122989	218294	Mm.25335	NM_172587	ENSMUSG00000033102	Cdc14b	2810432N10Rik|A530086E13Rik|AA472821|CDC14B3|Cdc14B1	CDC14 cell division cycle 14B	protein-coding	0.030000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-2769	chr8	83732033	83732233	+	1.71642	NA	intron (NM_011925, intron 4 of 19)	intron (NM_011925, intron 4 of 19)	-8149	NR_106188	102465897		NR_106188	ENSMUSG00000098465	Mir1668	Gm27590|mmu-mir-1668	microRNA 1668	ncRNA	0.005000	0.472637			
ePOU_nocontrol_ChIP_peaks_unique-1609	chr19	60124810	60125010	+	1.71642	NA	Intergenic	Intergenic	-19765	NR_026942	107376	Mm.245813	NR_026942	ENSMUSG00000053117	E330013P04Rik	9930018I18Rik|AW492152	RIKEN cDNA E330013P04 gene	ncRNA	0.010000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-1157	chr15	94629116	94629316	+	1.71642	NA	promoter-TSS (NM_178789)	promoter-TSS (NM_178789)	31	NM_178789	320709	Mm.74873	NM_178789	ENSMUSG00000063296	Tmem117	B930062P21Rik	transmembrane protein 117	protein-coding	0.205000	0.800995			
ePOU_nocontrol_ChIP_peaks_unique-846	chr13	59971399	59971599	+	1.71642	NA	Intergenic	Intergenic	-58212	NR_046142	328263	Mm.123405	NR_046142	ENSMUSG00000114531	A530065N20Rik	A530065N20	RIKEN cDNA A530046M15 gene	ncRNA	0.040000	0.522388		41(CCTCCATATGCATA,+,0.00)	18(ATTTGCAAACCAGAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-860	chr13	79458823	79459023	+	1.71642	NA	Intergenic	Intergenic	-1260050	NM_010151	13865	Mm.439653	NM_010151	ENSMUSG00000069171	Nr2f1	COUP-TF1|COUP-TFI|COUPTFA|EAR-3|EAR3|Erbal3|SVP44|Tcfcoup1	nuclear receptor subfamily 2, group F, member 1	protein-coding	0.000000	0.278607		17(AATGCAAATGCATC,+,0.00),17(AATGCAAATGCATC,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-913	chr13	114809991	114810191	+	1.71642	NA	Intergenic	Intergenic	-8146	NM_001113374	17434	Mm.19027	NM_013826	ENSMUSG00000015536	Mocs2	AI415403	molybdenum cofactor synthesis 2	protein-coding	0.010000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-1714	chr2	76818041	76818241	+	1.71642	NA	intron (NM_028004, intron 47 of 191)	AT_rich|Low_complexity|Low_complexity	142826	NM_031256	83435	Mm.41636	NM_031256	ENSMUSG00000002733	Plekha3	FAPP1	pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3	protein-coding	0.000000	0.288557			-97(CATTTGTTATGTTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-84	chr1	74098603	74098803	+	1.71642	NA	intron (NM_027884, intron 1 of 34)	CpG	25845	NM_001289895	21961	Mm.309975	NM_027884	ENSMUSG00000055322	Tns1	1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns	tensin 1	protein-coding	0.095000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-2509	chr6	118103613	118103813	+	1.71642	NA	Intergenic	L1VL2|LINE|L1	18521	NR_106011	102465632		NR_106011	ENSMUSG00000098583	Mir7044	Gm27354|mmu-mir-7044	microRNA 7044	ncRNA	0.010000	0.388060			-93(CCTTTATCATGTTAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2251	chr5	58737195	58737395	+	1.71642	NA	Intergenic	Intergenic	-284297	NR_046190	78163	Mm.243828	NR_046190	ENSMUSG00000105234	4930459L07Rik	-	RIKEN cDNA 4930459L07 gene	ncRNA	0.000000	0.288557			43(ATAAAAATGACAATAT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2219	chr5	30888220	30888420	+	1.71642	NA	promoter-TSS (NM_174849)	promoter-TSS (NM_174849)	-532	NM_174849	231093	Mm.440364	NM_174849	ENSMUSG00000029165	Agbl5	9430057O19Rik|CCP5	ATP/GTP binding protein-like 5	protein-coding	0.025000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-2260	chr5	65737353	65737553	+	1.71642	NA	Intergenic	RLTR13B3|LTR|ERVK	-26068	NM_001024917	333789	Mm.332398	NM_001024917	ENSMUSG00000037795	N4bp2	B3bp|E430014I16|Gm1791|Gm868	NEDD4 binding protein 2	protein-coding	0.010000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-190	chr1	170868539	170868739	+	1.71642	NA	promoter-TSS (NM_001081304)	promoter-TSS (NM_001081304)	-868	NM_001081304	226641	Mm.377046	NM_001081304	ENSMUSG00000026663	Atf6	9130025P16Rik|9630036G24|AA789574|Atf6alpha|ESTM49	activating transcription factor 6	protein-coding	0.055000	0.477612			
ePOU_nocontrol_ChIP_peaks_unique-2968	chr9	122923358	122923558	+	1.71642	NA	intron (NM_009544, intron 1 of 3)	intron (NM_009544, intron 1 of 3)	380	NM_009544	22646	Mm.290595	NM_009544	ENSMUSG00000057895	Zfp105	AW557864	zinc finger protein 105	protein-coding	0.020000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-2141	chr4	117146306	117146506	+	1.71642	NA	Intergenic	Intergenic	8168	NR_028524	100217424		NR_028524	ENSMUSG00000065680	Snord38a	MBII-329	small nucleolar RNA, C/D box 38A	snoRNA	0.025000	0.572139			
ePOU_nocontrol_ChIP_peaks_unique-1932	chr3	80878508	80878708	+	1.71642	NA	intron (NM_001281969, intron 3 of 9)	intron (NM_001281969, intron 3 of 9)	33510	NM_001345996	14658	Mm.275639	NM_010298	ENSMUSG00000028020	Glrb	AI853901|Glyrb|spa|spastic	glycine receptor, beta subunit	protein-coding	0.005000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-1202	chr16	20829598	20829798	+	1.71642	NA	Intergenic	Intergenic	-95187	NM_009379	21832	Mm.3943	NM_009379	ENSMUSG00000022847	Thpo	Mgdf|Ml|Mpllg|Tpo	thrombopoietin	protein-coding	0.005000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-2420	chr6	42333779	42333979	+	1.71642	NA	Intergenic	Intergenic	-9239	NM_001113327	76156	Mm.234314	NM_029528	ENSMUSG00000029861	Fam131b	6330503C03Rik|6530406I18Rik|AV277466	family with sequence similarity 131, member B	protein-coding	0.005000	0.402985			-89(GTTTTGTCATATTAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-6	chr1	10037737	10037937	+	1.71642	NA	promoter-TSS (NM_026493)	promoter-TSS (NM_026493)	322	NM_001277101	26754	Mm.402384	NM_013715	ENSMUSG00000025917	Cops5	AI303502|CSN5|Jab1|Mov34|Sgn5	COP9 signalosome subunit 5	protein-coding	0.040000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-17	chr1	20867506	20867706	+	1.71642	NA	Intergenic	LTR16B|LTR|ERVL	22867	NR_040492	77741	Mm.159984	NR_040492	ENSMUSG00000097934	6720483E21Rik	-	RIKEN cDNA 6720483E21 gene	ncRNA	0.020000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-411	chr10	128805102	128805302	+	1.71642	NA	promoter-TSS (NM_001359825)	promoter-TSS (NM_001359825)	-352	NM_001359825	74330	Mm.296915	NM_028873	ENSMUSG00000025354	Dnajc14	5730551F12Rik|DNAJ|DRIP78|HDJ3|LIP6	DnaJ heat shock protein family (Hsp40) member C14	protein-coding	0.075000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-983	chr14	62837374	62837574	+	1.71642	NA	promoter-TSS (NR_106174)	promoter-TSS (NR_106174)	-216	NM_175546	268752	Mm.1960	NM_175546	ENSMUSG00000014547	Wdfy2	5830485M08|B130024L21Rik|ProF|ZFYVE22	WD repeat and FYVE domain containing 2	protein-coding	0.060000	0.582090			
ePOU_nocontrol_ChIP_peaks_unique-871	chr13	90206566	90206766	+	1.71642	NA	Intergenic	Intergenic	116999	NM_025335	66074	Mm.241387	NM_025335	ENSMUSG00000012422	Tmem167	0610041E09Rik|5730424F14Rik|AU041184|AW537806|Gm10085|Tmem167a	transmembrane protein 167	protein-coding	0.005000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-1250	chr16	49855690	49855890	+	1.71642	NA	exon (NM_010581, exon 1 of 10)	exon (NM_010581, exon 1 of 10)	129	NM_001368416	16423	Mm.31752	NM_010581	ENSMUSG00000055447	Cd47	9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	protein-coding	0.115000	0.751244			
Oct4_nocontrol_ChIP_peaks_unique-13	chr10	76726539	76726739	+	1.71642	NA	promoter-TSS (NM_009933)	promoter-TSS (NM_009933)	-595	NM_009933	12833	Mm.2509	NM_009933	ENSMUSG00000001119	Col6a1	AI747156|Col6a-1	collagen, type VI, alpha 1	protein-coding	0.000000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique	chr1	3444997	3445197	+	1.71642	NA	intron (NM_001011874, intron 1 of 2)	intron (NM_001011874, intron 1 of 2)	226401	NM_001011874	497097	Mm.454496	NM_001011874	ENSMUSG00000051951	Xkr4	AY534250|Gm210|XRG4|mKIAA1889	X-linked Kx blood group related 4	protein-coding	0.005000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-2228	chr5	33629459	33629659	+	1.71642	NA	promoter-TSS (NM_001359463)	promoter-TSS (NM_001359463)	76	NM_001359463	74504	Mm.294695	NM_178390	ENSMUSG00000037339	Fam53a	2410018C17Rik|5430419M09Rik|Dntnp	family with sequence similarity 53, member A	protein-coding	0.145000	0.721393			
ePOU_nocontrol_ChIP_peaks_unique-362	chr10	88563788	88563988	+	1.71642	NA	intron (NM_001252372, intron 7 of 28)	intron (NM_001252372, intron 7 of 28)	41264	NM_001252372	109272	Mm.147208	NM_175418	ENSMUSG00000020061	Mybpc1	8030451F13Rik	myosin binding protein C, slow-type	protein-coding	0.005000	0.328358			20(GCTTTCATATGCAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1290	chr16	90934845	90935045	+	1.71642	NA	promoter-TSS (NM_026502)	promoter-TSS (NM_026502)	-96	NM_026502	68001	Mm.45374	NM_026502	ENSMUSG00000022972	Cfap298	1110004E09Rik	cilia and flagella associate protien 298	protein-coding	0.095000	0.636816			
ePOU_nocontrol_ChIP_peaks_unique-1783	chr2	131761721	131761921	+	1.71642	NA	Intergenic	Intergenic	85835	NR_029381	414081	Mm.246905	NR_029381	ENSMUSG00000086822	5330413P13Rik	-	RIKEN cDNA 5330413P13 gene	ncRNA	0.010000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-1812	chr2	156008010	156008210	+	1.71642	NA	promoter-TSS (NM_001356413)	promoter-TSS (NM_001356413)	82	NM_025516	66366	Mm.141276	NM_025516	ENSMUSG00000005881	Ergic3	2310015B14Rik|AV318804|CGI-54|D2Ucla1|NY-BR-84|Sdbcag84	ERGIC and golgi 3	protein-coding	0.080000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-1165	chr15	99664797	99664997	+	1.71642	NA	Intergenic	Intergenic	-5480	NM_009597	11419	Mm.440107	NM_009597	ENSMUSG00000023017	Asic1	AI843610|ASIC|ASIC1a|Accn2|B530003N02Rik|BNaC2	acid-sensing (proton-gated) ion channel 1	protein-coding	0.050000	0.621891	69(TATGAATTATTCACC,+,0.00),69(TATGAATTATTCACC,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2495	chr6	103306600	103306800	+	1.71642	NA	Intergenic	Intergenic	-204176	NM_007697	12661	Mm.251288	NM_007697	ENSMUSG00000030077	Chl1	A530023M13Rik|AI465420|CALL|LICAM2	cell adhesion molecule L1-like	protein-coding	0.010000	0.323383			
ePOU_nocontrol_ChIP_peaks_unique-2999	chrX	150478134	150478334	+	1.71642	NA	Intergenic	Intergenic	-19084	NR_152724	382245	Mm.277309	NM_001164683	ENSMUSG00000041353	Tmem29	2700081K05Rik|6330540D07Rik|CXorf44-like	transmembrane protein 29	protein-coding	0.040000	0.542289			
ePOU_nocontrol_ChIP_peaks_unique-761	chr12	102065225	102065425	+	1.71642	NA	Intergenic	L1MA4|LINE|L1	-63402	NM_001362345	238384	Mm.312448	NM_172152	ENSMUSG00000041771	Slc24a4	A930002M03Rik|AW492432|NCKX4	solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	protein-coding	0.005000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-534	chr11	78178120	78178320	+	1.71642	NA	promoter-TSS (NM_026708)	promoter-TSS (NM_026708)	90	NM_001291237	68385	Mm.390375	NM_026708	ENSMUSG00000019437	Tlcd1	-	TLC domain containing 1	protein-coding	0.075000	0.621891			
ePOU_nocontrol_ChIP_peaks_unique-1587	chr19	44248055	44248255	+	1.71642	NA	Intergenic	Intergenic	44867	NM_024450	30049	Mm.480594	NM_024450	ENSMUSG00000025202	Scd3	4930513N16Rik	stearoyl-coenzyme A desaturase 3	protein-coding	0.050000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-229	chr1	189784562	189784762	+	1.71642	NA	intron (NM_008976, intron 1 of 18)	intron (NM_008976, intron 1 of 18)	56394	NM_008976	19250	Mm.4498	NM_008976	ENSMUSG00000026604	Ptpn14	C130080N23Rik|PTP36	protein tyrosine phosphatase, non-receptor type 14	protein-coding	0.025000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-158	chr1	150831452	150831652	+	1.71642	NA	intron (NM_001024720, intron 4 of 106)	intron (NM_001024720, intron 4 of 106)	161883	NM_001024720	545370	Mm.379425	NM_001024720	ENSMUSG00000066842	Hmcn1	EG545370|FIBL-6|Gm201	hemicentin 1	protein-coding	0.010000	0.308458	-18(TATGAATAATGGATT,+,0.00),-18(TATGAATAATGGATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1132	chr15	75909400	75909600	+	1.71642	NA	promoter-TSS (NM_001285432)	promoter-TSS (NM_001285432)	56	NM_001285431	66656	Mm.258927	NM_023240	ENSMUSG00000055762	Eef1d	EF-1-delta	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	protein-coding	0.090000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-2648	chr7	112497416	112497616	+	1.71642	NA	intron (NM_020606, intron 1 of 12)	Tigger7|DNA|TcMar-Tigger	38167	NR_154467	102636183	Mm.446701	NR_154466		Parvaos	A230071N21Rik	parvin, alpha, opposite strand	ncRNA	0.005000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-2240	chr5	45450228	45450428	+	1.71642	NA	promoter-TSS (NM_024236)	promoter-TSS (NM_024236)	-99	NM_024236	110391	Mm.30204	NM_024236	ENSMUSG00000015806	Qdpr	2610008L04Rik|D5Ertd371e|Dhpr|PKU2	quinoid dihydropteridine reductase	protein-coding	0.090000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-1276	chr16	77644108	77644308	+	1.71642	NA	Intergenic	Intergenic	-2065	NR_029540	723952		NR_029540	ENSMUSG00000065472	Mir125b-2	Mirn125b-2|mir-125b-2	microRNA 125b-2	ncRNA	0.015000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-986	chr14	64192084	64192284	+	1.71642	NA	intron (NM_001347639, intron 5 of 5)	intron (NM_001347639, intron 5 of 5)	87861	NM_028525	73382	Mm.481055	NM_028525	ENSMUSG00000021966	Prss52	1700049K14Rik|Tesp3	protease, serine 52	protein-coding	0.020000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-173	chr1	160195036	160195236	+	1.71642	NA	promoter-TSS (NM_001347121)	promoter-TSS (NM_001347121)	-79	NM_025474	64659	Mm.29599	NM_025474	ENSMUSG00000058267	Mrps14	1810032L21Rik|AL022847|Rpms14	mitochondrial ribosomal protein S14	protein-coding	0.050000	0.532338			
ePOU_nocontrol_ChIP_peaks_unique-520	chr11	70021378	70021578	+	1.71642	NA	intron (NM_001109752, intron 1 of 19)	intron (NM_001109752, intron 1 of 19)	-2504	NM_001370671	13385	Mm.27256	NM_007864	ENSMUSG00000020886	Dlg4	Dlgh4|PSD-95|PSD95|SAP90|SAP90A	discs large MAGUK scaffold protein 4	protein-coding	0.030000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-2401	chr6	24554702	24554902	+	1.71642	NA	intron (NM_080847, intron 1 of 9)	intron (NM_080847, intron 1 of 9)	26658	NM_080847	78910	Mm.160150	NM_080847	ENSMUSG00000029685	Asb15	4930400E23Rik|Asb-15	ankyrin repeat and SOCS box-containing 15	protein-coding	0.010000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-2943	chr9	107961673	107961873	+	1.71642	NA	intron (NM_011634, intron 7 of 14)	intron (NM_011634, intron 7 of 14)	10810	NM_011634	22036	Mm.297870	NM_011634	ENSMUSG00000032586	Traip	Trip	TRAF-interacting protein	protein-coding	0.010000	0.487562			-85(CTTTTGTAATGCAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-34	chr1	34005605	34005805	+	1.71642	NA	intron (NM_001276764, intron 3 of 102)	intron (NM_001276764, intron 3 of 102)	-5890	NM_133833	13518	Mm.336625	NM_010081	ENSMUSG00000026131	Dst	2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339	dystonin	protein-coding	0.015000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-2716	chr8	42003328	42003528	+	1.71642	NA	intron (NR_045497, intron 3 of 5)	intron (NR_045497, intron 3 of 5)	176161	NR_045497	69966	Mm.416903	NR_045497	ENSMUSG00000102046	2810404M03Rik	-	RIKEN cDNA 2810404M03 gene	ncRNA	0.000000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-1790	chr2	135439921	135440121	+	1.71642	NA	intron (NM_019677, intron 32 of 32)	intron (NM_019677, intron 32 of 32)	143199	NR_015544	320684	Mm.421433	NR_015544	ENSMUSG00000085631	9630028H03Rik	-	RIKEN cDNA 9630028H03 gene	ncRNA	0.010000	0.492537			-34(ATTAGAAAGGCAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-430	chr11	17953426	17953626	+	1.71642	NA	promoter-TSS (NR_131915)	promoter-TSS (NR_131915)	349	NM_026576	68145	Mm.178684	NM_026576	ENSMUSG00000016984	Etaa1	5730466H23Rik|AA672646	Ewing tumor-associated antigen 1	protein-coding	0.120000	0.741294			
ePOU_nocontrol_ChIP_peaks_unique-602	chr11	109298110	109298310	+	1.71642	NA	promoter-TSS (NM_001165934)	promoter-TSS (NM_001165934)	-29	NM_001165934	19739	Mm.38548	NM_011268	ENSMUSG00000020599	Rgs9	RGS9-1|Rgs9-2	regulator of G-protein signaling 9	protein-coding	0.100000	0.681592			
ePOU_nocontrol_ChIP_peaks_unique-2296	chr5	100500709	100500909	+	1.71642	NA	promoter-TSS (NM_172714)	promoter-TSS (NM_172714)	-170	NM_172714	231506	Mm.212568	NM_172714	ENSMUSG00000035310	Lin54	AI461788	lin-54 homolog (C. elegans)	protein-coding	0.080000	0.661692			
ePOU_nocontrol_ChIP_peaks_unique-1643	chr2	24296530	24296730	+	1.71642	NA	Intergenic	Intergenic	5434	NM_153077	215274	Mm.218750	NM_153077	ENSMUSG00000046845	Il1f10	-	interleukin 1 family, member 10	protein-coding	0.015000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-2284	chr5	84230105	84230305	+	1.71642	NA	intron (NM_007937, intron 3 of 15)	intron (NM_007937, intron 3 of 15)	187177	NM_007937	13839	Mm.137991	NM_007937	ENSMUSG00000029245	Epha5	AI854630|AW125296|Cek7|Ehk1|Els1|Hek7|Rek7|bsk	Eph receptor A5	protein-coding	0.000000	0.338308	-40(AATGAATTATTCATC,+,0.00),-40(AATGAATTATTCATC,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1269	chr16	73201032	73201232	+	1.71642	NA	Intergenic	Intergenic	537983	NM_019413	19876	Mm.310772	NM_019413	ENSMUSG00000022883	Robo1	AW494633|AW742721|DUTT1|Gm310	roundabout guidance receptor 1	protein-coding	0.010000	0.402985			63(ATTTGAATGCTAATTG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-937	chr14	28559826	28560026	+	1.71642	NA	Intergenic	Intergenic	48521	NM_001256224	22418	Mm.287544	NM_009524	ENSMUSG00000021994	Wnt5a	8030457G12Rik|Wnt-5a	wingless-type MMTV integration site family, member 5A	protein-coding	0.005000	0.422886			64(GTTTGCATAAGAGTGA,-,0.00)
Oct4_nocontrol_ChIP_peaks_unique-23	chr12	72760983	72761183	+	1.71642	NA	promoter-TSS (NM_008910)	promoter-TSS (NM_008910)	-128	NM_008910	19042	Mm.261045	NM_008910	ENSMUSG00000021096	Ppm1a	2310003C21Rik|2900017D14Rik|AI427932|AU017636|MMPa-2|MPPa-1	protein phosphatase 1A, magnesium dependent, alpha isoform	protein-coding	0.120000	0.766169			
ePOU_nocontrol_ChIP_peaks_unique-2218	chr5	30548700	30548900	+	1.71642	NA	Intergenic	A-rich|Low_complexity|Low_complexity	-2964	NM_028483	73259	Mm.443299	NM_028483	ENSMUSG00000053194	Cib4	1700041E20Rik	calcium and integrin binding family member 4	protein-coding	0.005000	0.417910			-27(ATTAAAAAAAAAAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1855	chr3	20779068	20779268	+	1.71642	NA	Intergenic	Intergenic	-411991	NM_175086	11608	Mm.134863	NM_175086	ENSMUSG00000054988	Agtr1b	AT1B|AT2R1B|Agtr-1b|Angtr-1b	angiotensin II receptor, type 1b	protein-coding	0.000000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-1693	chr2	61454501	61454701	+	1.71642	NA	Intergenic	Intergenic	-123985	NM_011529	21353	Mm.244393	NM_011529	ENSMUSG00000064289	Tank	C86182|E430026L09Rik|I-TRAF	TRAF family member-associated Nf-kappa B activator	protein-coding	0.035000	0.487562			-8(AGTTTCTTATTGAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-42	chr1	39685857	39686057	+	1.71642	NA	intron (NM_001145660, intron 7 of 14)	intron (NM_001145660, intron 7 of 14)	-34775	NM_170597	263764	Mm.122091	NM_170597	ENSMUSG00000050967	Creg2	A830098L22Rik	cellular repressor of E1A-stimulated genes 2	protein-coding	0.000000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-2750	chr8	70673337	70673537	+	1.71642	NA	5' UTR (NM_015816, exon 1 of 5)	5' UTR (NM_015816, exon 1 of 5)	206	NM_015816	50783	Mm.248188	NM_015816	ENSMUSG00000031848	Lsm4	-	LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated	protein-coding	0.105000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-2181	chr4	149737795	149737995	+	1.71642	NA	promoter-TSS (NM_001284273)	promoter-TSS (NM_001284273)	-125	NM_001284273	230917	Mm.266704	NM_177672	ENSMUSG00000044700	Tmem201	AV028368|D4Ertd429e|Net5|Samp1	transmembrane protein 201	protein-coding	0.150000	0.776119			
ePOU_nocontrol_ChIP_peaks_unique-1830	chr2	167188770	167188970	+	1.71642	NA	promoter-TSS (NM_008420)	promoter-TSS (NM_008420)	-52	NM_008420	16500	Mm.205341	NM_008420	ENSMUSG00000050556	Kcnb1	Kcr1-1|Kv2.1|Shab	potassium voltage gated channel, Shab-related subfamily, member 1	protein-coding	0.070000	0.681592			
ePOU_nocontrol_ChIP_peaks_unique-2192	chr5	4651115	4651315	+	1.71642	NA	Intergenic	Intergenic	107001	NM_021457	14362	Mm.246003	NM_021457	ENSMUSG00000044674	Fzd1	AW227548|FZ-1|Fz1	frizzled class receptor 1	protein-coding	0.000000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-2768	chr8	83662416	83662616	+	1.71642	NA	intron (NM_018771, intron 4 of 6)	intron (NM_018771, intron 4 of 6)	-4128	NM_013641	19216	Mm.213000	NM_013641	ENSMUSG00000019464	Ptger1	EP1|Ptgerep1	prostaglandin E receptor 1 (subtype EP1)	protein-coding	0.015000	0.592040			
ePOU_nocontrol_ChIP_peaks_unique-2253	chr5	64230803	64231003	+	1.71642	NA	intron (NM_001289514, intron 1 of 18)	intron (NM_001289514, intron 1 of 18)	546	NM_001289514	57915	Mm.286353	NM_019636	ENSMUSG00000029174	Tbc1d1	1110062G02Rik|AI385682|AW555803|Nob1|Nobq1|Tbc1|mKIAA1108	TBC1 domain family, member 1	protein-coding	0.050000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-2743	chr8	66696994	66697194	+	1.71642	NA	promoter-TSS (NM_010934)	promoter-TSS (NM_010934)	-328	NM_010934	18166	Mm.5112	NM_010934	ENSMUSG00000036437	Npy1r	NPY1-R|Npyr|Y1-R	neuropeptide Y receptor Y1	protein-coding	0.035000	0.477612			
ePOU_nocontrol_ChIP_peaks_unique-2760	chr8	72570876	72571076	+	1.71642	NA	promoter-TSS (NM_144534)	promoter-TSS (NM_144534)	72	NM_172396	66818	Mm.22565	NM_172396	ENSMUSG00000044600	Smim7	9130011J15Rik	small integral membrane protein 7	protein-coding	0.065000	0.552239			
ePOU_nocontrol_ChIP_peaks_unique-782	chr13	6482142	6482342	+	1.71642	NA	Intergenic	MER2|DNA|TcMar-Tigger	-65915	NM_001360106	69617	Mm.41933	NM_145131	ENSMUSG00000021193	Pitrm1	2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104	pitrilysin metallepetidase 1	protein-coding	0.005000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-33	chr1	33892780	33892980	+	1.71642	NA	intron (NM_177235, intron 1 of 6)	intron (NM_177235, intron 1 of 6)	14741	NM_177235	320705	Mm.336619	NM_177235	ENSMUSG00000042182	Bend6	B230209C24Rik	BEN domain containing 6	protein-coding	0.020000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-2026	chr3	147963627	147963827	+	1.71642	NA	Intergenic	Intergenic	990908	NM_001081298	99633	Mm.9776	NM_001081298	ENSMUSG00000028184	Adgrl2	AI450192|CIRL-2|Gm619|Lec1|Lphh1|Lphn2|mKIAA0786	adhesion G protein-coupled receptor L2	protein-coding	0.010000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-1359	chr17	46328010	46328210	+	1.71642	NA	promoter-TSS (NM_001347396)	promoter-TSS (NM_001347396)	-87	NM_001347396	224814	Mm.76543	NM_145140	ENSMUSG00000032842	Abcc10	Mrp7|mFLJ00002	ATP-binding cassette, sub-family C (CFTR/MRP), member 10	protein-coding	0.055000	0.567164			
ePOU_nocontrol_ChIP_peaks_unique-1188	chr16	11134580	11134780	+	1.71642	NA	promoter-TSS (NM_029582)	promoter-TSS (NM_029582)	-148	NM_029582	106200	Mm.291015	NM_029582	ENSMUSG00000022498	Txndc11	2810408E11Rik|AI427833|EFP1|Txdc11	thioredoxin domain containing 11	protein-coding	0.120000	0.706468			
ePOU_nocontrol_ChIP_peaks_unique-2858	chr9	35045449	35045649	+	1.71642	NA	Intergenic	Intergenic	-71179	NR_029475	78934	Mm.391688	NR_029475	ENSMUSG00000070315	4930581F22Rik	-	RIKEN cDNA 4930581F22 gene	ncRNA	0.005000	0.497512			
ePOU_nocontrol_ChIP_peaks_unique-2630	chr7	98323950	98324150	+	1.71642	NA	Intergenic	MIR|SINE|MIR	-2842	NM_001360615	66190	Mm.334041	NM_025408	ENSMUSG00000030760	Acer3	1110057L18Rik|5430429L08Rik|AV015045|Phca|aPHC	alkaline ceramidase 3	protein-coding	0.000000	0.308458			
ePOU_nocontrol_ChIP_peaks_unique-963	chr14	48800470	48800670	+	1.71642	NA	Intergenic	Intergenic	-78303	NR_033783	66770	Mm.136954	NR_033783	ENSMUSG00000115008	4933429O19Rik	1700031B11Rik	RIKEN cDNA 4933429O19 gene	ncRNA	0.020000	0.427861			-76(TGTTTTACATTCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-588	chr11	102925380	102925580	+	1.71642	NA	promoter-TSS (NM_197959)	promoter-TSS (NM_197959)	-356	NM_197959	70218	Mm.32084	NM_197959	ENSMUSG00000051378	Kif18b	3000004C01Rik	kinesin family member 18B	protein-coding	0.030000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-700	chr12	72069534	72069734	+	1.71642	NA	exon (NM_181752, exon 1 of 1)	exon (NM_181752, exon 1 of 1)	1467	NM_181752	238252	Mm.390508	NM_181752	ENSMUSG00000043398	Gpr135	PAFR	G protein-coupled receptor 135	protein-coding	0.030000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-2125	chr4	98555877	98556077	+	1.71642	NA	intron (NM_001005787, intron 1 of 15)	intron (NM_001005787, intron 1 of 15)	9343	NM_007704	12695	Mm.90218	NM_007704	ENSMUSG00000061859	Patj	Cipp|Inadl	PATJ, crumbs cell polarity complex component	protein-coding	0.010000	0.467662			48(ATTTGCAACACAGTAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-133	chr1	127419694	127419894	+	1.71642	NA	intron (NM_145128, intron 12 of 17)	intron (NM_145128, intron 12 of 17)	214808	NM_145128	107895	Mm.214682	NM_145128	ENSMUSG00000036155	Mgat5	4930471A21Rik|5330407H02Rik|AI480971|GlcNAc-TV	mannoside acetylglucosaminyltransferase 5	protein-coding	0.020000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-2614	chr7	84379721	84379921	+	1.71642	NA	intron (NM_007488, intron 1 of 18)	intron (NM_007488, intron 1 of 18)	30217	NM_007488	11864	Mm.38594	NM_007488	ENSMUSG00000015709	Arnt2	Hif-2b|bHLHe1|mKIAA0307	aryl hydrocarbon receptor nuclear translocator 2	protein-coding	0.010000	0.343284			-5(GTTTACACAACAATTG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2623	chr7	92387710	92387910	+	1.71642	NA	intron (NM_001243047, intron 4 of 10)	L1MB7|LINE|L1	152840	NM_001243047	23859	Mm.147213	NM_011807	ENSMUSG00000052572	Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|Gm21505|PSD93	discs large MAGUK scaffold protein 2	protein-coding	0.010000	0.298507			
ePOU_nocontrol_ChIP_peaks_unique-1406	chr17	86419523	86419723	+	1.71642	NA	intron (NM_011104, intron 2 of 14)	intron (NM_011104, intron 2 of 14)	-132445	NR_045435	72104	Mm.443401	NR_045435	ENSMUSG00000100738	2010106C02Rik	-	RIKEN cDNA 2010106C02 gene	ncRNA	0.015000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-1624	chr2	11426261	11426461	+	1.71642	NA	Intergenic	Intergenic	-27861	NR_040615	77543	Mm.490670	NR_040615	ENSMUSG00000102674	8030442B05Rik	-	RIKEN cDNA 8030442B05 gene	ncRNA	0.000000	0.368159			-41(ATTTTGAAATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2503	chr6	113046168	113046368	+	1.71642	NA	promoter-TSS (NM_001355266)	promoter-TSS (NM_001355266)	-34	NM_008188	14911	Mm.781	NM_008188	ENSMUSG00000030264	Thumpd3	AW556087|Gt(ROSA)26asSor|Gtrosa26as	THUMP domain containing 3	protein-coding	0.115000	0.711443			
ePOU_nocontrol_ChIP_peaks_unique-2424	chr6	43659183	43659383	+	1.71642	NA	intron (NM_001311111, intron 2 of 7)	Charlie2b|DNA|hAT-Charlie	6995	NM_013861	29807	Mm.320979	NM_013861	ENSMUSG00000029735	Tpk1	-	thiamine pyrophosphokinase	protein-coding	0.005000	0.263682			
ePOU_nocontrol_ChIP_peaks_unique-276	chr10	24897533	24897733	+	1.71642	NA	intron (NM_001166416, intron 17 of 29)	B1_Mur4|SINE|Alu	-13031	NR_105870	102465545		NR_105870	ENSMUSG00000099181	Mir6905	Gm27879|mmu-mir-6905	microRNA 6905	ncRNA	0.005000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-24	chr1	22881525	22881725	+	1.71642	NA	Intergenic	Lx7|LINE|L1	-16762	NR_151543	665725	Mm.416993	NR_151543		Gm7759	EG665725	predicted gene 7759	ncRNA	0.035000	0.442786			61(ATTTACAAGATACAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1849	chr3	15014649	15014849	+	1.71642	NA	Intergenic	Intergenic	43548	NR_040550	77127	Mm.195792	NR_040549	ENSMUSG00000098008	A930001A20Rik	-	RIKEN cDNA A930001A20 gene	ncRNA	0.000000	0.363184	-10(AATGCATTATTCATG,+,0.00),-10(AATGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2991	chrX	101164460	101164660	+	1.71642	NA	intron (NM_001110311, intron 4 of 5)	Lx8b|LINE|L1	58003	NM_018875	55988	Mm.206949	NM_018875	ENSMUSG00000046032	Snx12	2610001F05Rik|AW045757|SDP8	sorting nexin 12	protein-coding	0.000000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-1842	chr2	181365348	181365548	+	1.71642	NA	promoter-TSS (NM_001048148)	promoter-TSS (NM_001048148)	25	NM_001048148	229007	Mm.87720	NM_144894	ENSMUSG00000027582	Zgpat	1500006I01Rik|BC021513	zinc finger, CCCH-type with G patch domain	protein-coding	0.130000	0.741294			
ePOU_nocontrol_ChIP_peaks_unique-71	chr1	62752071	62752271	+	1.71642	NA	intron (NM_001077403, intron 7 of 16)	intron (NM_001077403, intron 7 of 16)	42561	NR_040601	74992	Mm.401979	NR_040601		4930487H11Rik	-	RIKEN cDNA 4930487H11 gene	ncRNA	0.025000	0.477612			
ePOU_nocontrol_ChIP_peaks_unique-517	chr11	69088461	69088661	+	1.71642	NA	promoter-TSS (NM_009497)	promoter-TSS (NM_009497)	33	NM_009497	22318	Mm.28643	NM_009497	ENSMUSG00000020894	Vamp2	Syb-2|Syb2|Vamp-2|sybII	vesicle-associated membrane protein 2	protein-coding	0.145000	0.746269			
ePOU_nocontrol_ChIP_peaks_unique-2983	chrX	53283098	53283298	+	1.71642	NA	intron (NR_153099, intron 3 of 9)	intron (NR_153099, intron 3 of 9)	9774	NR_153100	73866	Mm.84527	NM_028671	ENSMUSG00000036013	Fam122c	4930432H15Rik|4930527G05Rik	family with sequence similarity 122, member C	protein-coding	0.020000	0.398010			37(TCTTTGTCTTACTGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1434	chr18	24020463	24020663	+	1.71642	NA	promoter-TSS (NM_001357447)	promoter-TSS (NM_001357447)	-193	NM_001357448	59057	Mm.417427	NM_021559	ENSMUSG00000051469	Zfp24	3526401F17Rik|5033419P20Rik|AI480505|AI642085|AL024422|KOX17|ZF-12|Zfp191|Znf24	zinc finger protein 24	protein-coding	0.140000	0.736318			
ePOU_nocontrol_ChIP_peaks_unique-2435	chr6	51567053	51567253	+	1.71642	NA	intron (NM_001361576, intron 3 of 7)	intron (NM_001361576, intron 3 of 7)	21860	NM_001361577	71982	Mm.294166	NM_028035	ENSMUSG00000038301	Snx10	2410004M09Rik	sorting nexin 10	protein-coding	0.005000	0.363184			35(ATTTTAATAAGAATAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-500	chr11	62746211	62746411	+	1.71642	NA	Intergenic	Intergenic	-17218	NM_133208	170740	Mm.339982	NM_133208	ENSMUSG00000005267	Zfp287	B230333C16Rik|SKAT-2|Skat2|Znf287|mszf16|mszf74|zfp-287	zinc finger protein 287	protein-coding	0.030000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-1183	chr16	8637599	8637799	+	1.71642	NA	promoter-TSS (NM_016881)	promoter-TSS (NM_016881)	-8	NM_001362485	54128	Mm.9699	NM_016881	ENSMUSG00000022711	Pmm2	AI585868|C86848	phosphomannomutase 2	protein-coding	0.050000	0.527363			
ePOU_nocontrol_ChIP_peaks_unique-2182	chr4	150721510	150721710	+	1.71642	NA	Intergenic	RLTR17B_Mm|LTR|ERVK	-69436	NM_001355737	242773	Mm.29280	NM_173774	ENSMUSG00000039838	Slc45a1	C230078B22|Dnb5	solute carrier family 45, member 1	protein-coding	0.015000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-926	chr14	16847026	16847226	+	1.71642	NA	intron (NM_001289760, intron 1 of 9)	intron (NM_001289760, intron 1 of 9)	235205	NM_001289760	218772	Mm.259318	NM_011243	ENSMUSG00000017491	Rarb	A830025K23|Hap|Nr1b2	retinoic acid receptor, beta	protein-coding	0.005000	0.353234	-47(AATGAATAATTCATA,+,0.00),-47(AATGAATAATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1981	chr3	109568360	109568560	+	1.71642	NA	intron (NM_020505, intron 17 of 26)	intron (NM_020505, intron 17 of 26)	-5547	NM_146139	57257	Mm.282257	NM_020505	ENSMUSG00000033721	Vav3	A530094I06Rik|AA986410|Idd18.1	vav 3 oncogene	protein-coding	0.000000	0.323383			
ePOU_nocontrol_ChIP_peaks_unique-1082	chr15	34508285	34508485	+	1.71642	NA	intron (NM_152894, intron 6 of 16)	intron (NM_152894, intron 6 of 16)	13074	NM_026340	67724	Mm.248779	NM_026340	ENSMUSG00000022325	Pop1	4932434G09Rik	processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)	protein-coding	0.010000	0.293532			-3(ACATTCTTATGTAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-343	chr10	77606274	77606474	+	1.71642	NA	promoter-TSS (NM_001301671)	promoter-TSS (NM_001301671)	-224	NM_001301671	20610	Mm.24433	NM_019929	ENSMUSG00000020265	Sumo3	2810014B19Rik|D10Ertd345e|SMT3A|SUMO-3|Smt3h1	small ubiquitin-like modifier 3	protein-coding	0.140000	0.736318			
ePOU_nocontrol_ChIP_peaks_unique-1651	chr2	30286372	30286572	+	1.71642	NA	promoter-TSS (NM_177648)	promoter-TSS (NM_177648)	56	NM_198304	227699	Mm.330119	NM_198304	ENSMUSG00000052533	Nup188	BC025526|U89435	nucleoporin 188	protein-coding	0.115000	0.761194			
Oct4_nocontrol_ChIP_peaks_unique-54	chr2	8680171	8680371	+	1.71642	NA	Intergenic	Intergenic	-509244	NR_038180	73438	Mm.23558	NR_038180	ENSMUSG00000085580	1700061F12Rik	-	RIKEN cDNA 1700061F12 gene	ncRNA	0.005000	0.293532			-82(TTTAACATAACAAATA,-,0.00),1(ATGTTCATCACAATAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1937	chr3	83446214	83446414	+	1.71642	NA	Intergenic	Intergenic	127804	NR_036591	69460	Mm.389464	NR_036591	ENSMUSG00000101334	1700028M03Rik	-	RIKEN cDNA 1700028M03 gene	ncRNA	0.005000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-2849	chr9	25295892	25296092	+	1.71642	NA	intron (NM_001359738, intron 6 of 12)	intron (NM_001359738, intron 6 of 12)	43100	NM_001359738	235072	Mm.270259	NM_009859	ENSMUSG00000001833	Sept7	Cdc10|E430034N22	septin 7	protein-coding	0.005000	0.263682			
ePOU_nocontrol_ChIP_peaks_unique-2779	chr8	89569998	89570198	+	1.71642	NA	Intergenic	Intergenic	-525936	NM_021390	58198	Mm.214361	NM_021390	ENSMUSG00000031665	Sall1	Msal-3	spalt like transcription factor 1	protein-coding	0.015000	0.313433			-7(ACATTCGGTTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2294	chr5	98329222	98329422	+	1.71642	NA	promoter-TSS (NM_001024614)	promoter-TSS (NM_001024614)	18	NM_001024614	75784	Mm.443240	NM_001024614	ENSMUSG00000057816	Cfap299	1700007G11Rik|4930428O21Rik	cilia and flagella associated protein 299	protein-coding	0.105000	0.681592			
ePOU_nocontrol_ChIP_peaks_unique-1758	chr2	118762515	118762715	+	1.71642	NA	promoter-TSS (NM_001001982)	promoter-TSS (NM_001001982)	46	NM_001001982	214239	Mm.379342	NM_001001982	ENSMUSG00000045838	Ccdc9b	A430105I19Rik|Gm353	coiled-coil domain containing 9B	protein-coding	0.045000	0.611940			
ePOU_nocontrol_ChIP_peaks_unique-1569	chr19	36409571	36409771	+	1.71642	NA	promoter-TSS (NM_001368693)	promoter-TSS (NM_001368693)	-77	NM_001368693	76073	Mm.259180	NM_029508	ENSMUSG00000024805	Pcgf5	0610009F02Rik|1110054A01Rik|5830406C17Rik|5830443C21Rik|9530023M17Rik|AI324127	polycomb group ring finger 5	protein-coding	0.130000	0.791045			
ePOU_nocontrol_ChIP_peaks_unique-618	chr11	117081634	117081834	+	1.71642	NA	Intergenic	Intergenic	4386	NR_105853	102465258		NR_105853	ENSMUSG00000104740	Mir6516	mmu-mir-6516	microRNA 6516	ncRNA	0.020000	0.472637			
ePOU_nocontrol_ChIP_peaks_unique-956	chr14	45184658	45184858	+	1.71642	NA	intron (NM_172597, intron 6 of 20)	Charlie1b|DNA|hAT-Charlie	34667	NM_172597	70561	Mm.28129	NM_172597	ENSMUSG00000021830	Txndc16	5730420B22Rik|C77647	thioredoxin domain containing 16	protein-coding	0.005000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-798	chr13	21179942	21180142	+	1.71642	NA	5' UTR (NM_009054, exon 1 of 8)	5' UTR (NM_009054, exon 1 of 8)	111	NM_009054	19720	Mm.314056	NM_009054	ENSMUSG00000021326	Trim27	AW538890|Gm19403|Rfp	tripartite motif-containing 27	protein-coding	0.080000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-1535	chr19	10525447	10525647	+	1.71642	NA	promoter-TSS (NM_025333)	promoter-TSS (NM_025333)	303	NM_172302	269061	Mm.490260	NM_172302	ENSMUSG00000034820	Cpsf7	5730453I16Rik|AL022757|C330017N18Rik	cleavage and polyadenylation specific factor 7	protein-coding	0.090000	0.746269			
ePOU_nocontrol_ChIP_peaks_unique-1665	chr2	34494232	34494432	+	1.71642	NA	intron (NM_001362921, intron 4 of 10)	RLTR13B3|LTR|ERVK	87481	NM_001362919	227743	Mm.270866	NM_177345	ENSMUSG00000038696	Mapkap1	AI591529|D230039K05Rik|Sin1	mitogen-activated protein kinase associated protein 1	protein-coding	0.005000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-473	chr11	45385897	45386097	+	1.71642	NA	Intergenic	Lx9|LINE|L1	-269069	NR_045100	100504255	Mm.123608	NR_045100	ENSMUSG00000084773	Gm12159	-	predicted gene 12159	ncRNA	0.000000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-3	chr1	7397957	7398157	+	1.71642	NA	Intergenic	CpG	309137	NM_183028	319263	Mm.21539	NM_183028	ENSMUSG00000051285	Pcmtd1	8430411F12Rik|A030012M09Rik	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	protein-coding	0.035000	0.572139			
ePOU_nocontrol_ChIP_peaks_unique-2655	chr7	117273357	117273557	+	1.71642	NA	Intergenic	Intergenic	-107522	NM_175645	233781	Mm.461427	NM_175645	ENSMUSG00000030657	Xylt1	8030490L12	xylosyltransferase 1	protein-coding	0.000000	0.298507			81(AATTTCTTTTTCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2893	chr9	64179088	64179288	+	1.71642	NA	promoter-TSS (NM_183316)	promoter-TSS (NM_183316)	-109	NM_183316	330959	Mm.24082	NM_183316	ENSMUSG00000032398	Snapc5	2010103A03Rik	small nuclear RNA activating complex, polypeptide 5	protein-coding	0.040000	0.527363			
ePOU_nocontrol_ChIP_peaks_unique-940	chr14	29386235	29386435	+	1.71642	NA	intron (NM_009785, intron 5 of 37)	intron (NM_009785, intron 5 of 37)	335529	NM_009785	12294	Mm.386754	NM_009785	ENSMUSG00000021991	Cacna2d3	Cacnad3|alapha2delta3	calcium channel, voltage-dependent, alpha2/delta subunit 3	protein-coding	0.000000	0.373134			-73(CTTTTGCATTGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2186	chr4	154877593	154877793	+	1.71642	NA	intron (NM_013783, intron 2 of 23)	(TG)n|Simple_repeat|Simple_repeat	-5690	NR_154548	102634887	Mm.72944	NR_154548		Gm13112	-	predicted gene 13112	ncRNA	0.020000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-1443	chr18	31789062	31789262	+	1.71642	NA	promoter-TSS (NM_001357480)	promoter-TSS (NM_001357480)	37	NM_027002	69241	Mm.279898	NM_027002	ENSMUSG00000024258	Polr2d	2310002G05Rik|2610028L19Rik|HSRBP4|RBP4	polymerase (RNA) II (DNA directed) polypeptide D	protein-coding	0.090000	0.616915			
ePOU_nocontrol_ChIP_peaks_unique-1175	chr16	3908736	3908936	+	1.71642	NA	promoter-TSS (NM_029738)	promoter-TSS (NM_029738)	-147	NM_028484	73261	Mm.486226	NM_028484	ENSMUSG00000005983	1700037C18Rik	2810022L20Rik	RIKEN cDNA 1700037C18 gene	protein-coding	0.045000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-410	chr10	128759667	128759867	+	1.71642	NA	intron (NM_001253704, intron 2 of 3)	intron (NM_001253704, intron 2 of 3)	11312	NM_001253704	78428	Mm.27358	NM_030100	ENSMUSG00000064030	Pym1	A030010B05Rik|Pym|Wibg	PYM homolog 1, exon junction complex associated factor	protein-coding	0.030000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-563	chr11	92135807	92136007	+	1.71642	NA	Intergenic	Intergenic	-558352	NM_028547	73470	Mm.67677	NM_028547	ENSMUSG00000046755	Kif2b	1700063D03Rik	kinesin family member 2B	protein-coding	0.000000	0.412935			-18(ATTTACATAAGAATGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1671	chr2	44697407	44697607	+	1.71642	NA	intron (NM_001362986, intron 5 of 10)	intron (NM_001362986, intron 5 of 10)	164115	NM_172662	227835	Mm.314312	NM_172662	ENSMUSG00000036890	Gtdc1	E330008O22Rik	glycosyltransferase-like domain containing 1	protein-coding	0.000000	0.278607			-36(ATTAAAATTACAAAAC,-,0.00),-2(CAATTAATATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2949	chr9	111243754	111243954	+	1.71642	NA	intron (NM_026810, intron 11 of 18)	RLTR25B|LTR|ERVK	27754	NM_001324522	17350	Mm.486383	NM_026810	ENSMUSG00000032498	Mlh1	1110035C23Rik|AI317206|AI325952|AI561766	mutL homolog 1	protein-coding	0.015000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-1825	chr2	165112133	165112333	+	1.71642	NA	exon (NM_174988, exon 12 of 12)	exon (NM_174988, exon 12 of 12)	-21483	NR_033448	72211	Mm.482899	NR_033448	ENSMUSG00000078935	1700025C18Rik	-	RIKEN cDNA 1700025C18 gene	ncRNA	0.160000	0.766169			
ePOU_nocontrol_ChIP_peaks_unique-1383	chr17	75006213	75006413	+	1.71642	NA	exon (NM_019919, exon 1 of 34)	exon (NM_019919, exon 1 of 34)	784	NM_019919	268977	Mm.269747	NM_019919	ENSMUSG00000001870	Ltbp1	9430031G15Rik|9830146M04|Ltbp-1|Ltbp1L|TGF-beta1-BP-1|Tgfb|b2b1000Clo	latent transforming growth factor beta binding protein 1	protein-coding	0.095000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-2454	chr6	67261351	67261551	+	1.71642	NA	Intergenic	Intergenic	-5528	NM_025814	66870	Mm.240490	NM_025814	ENSMUSG00000036371	Serbp1	1200009K13Rik|9330147J08Rik|AL022786|Pairbp1	serpine1 mRNA binding protein 1	protein-coding	0.005000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-306	chr10	41449767	41449967	+	1.71642	NA	promoter-TSS (NM_001277230)	promoter-TSS (NM_001277230)	-491	NM_001277229	268294	Mm.258475	NM_153398	ENSMUSG00000019826	Zbtb24	BC055367|Bif1|Bsg1|ZNF450	zinc finger and BTB domain containing 24	protein-coding	0.045000	0.517413			
ePOU_nocontrol_ChIP_peaks_unique-1011	chr14	76577964	76578164	+	1.71642	NA	Intergenic	Intergenic	-21148	NR_027699	72661	Mm.320384	NM_001160326	ENSMUSG00000052584	Serp2	2810032E02Rik	stress-associated endoplasmic reticulum protein family member 2	protein-coding	0.005000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-867	chr13	84449177	84449377	+	1.71642	NA	Intergenic	Eulor9C|DNA|DNA	226981	NM_175187	72745	Mm.295063	NM_175187	ENSMUSG00000035762	Tmem161b	2810446P07Rik|AI843389	transmembrane protein 161B	protein-coding	0.000000	0.412935	-4(TTTGAATAATGCAAG,+,0.00),-4(TTTGAATAATGCAAG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-261	chr10	17513928	17514128	+	1.71642	NA	Intergenic	L2|LINE|L2	-209200	NM_010828	17684	Mm.272321	NM_010828	ENSMUSG00000039910	Cited2	AI835299|ER154-like|Mrg1|Msg2|p35srj	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	protein-coding	0.010000	0.388060	-11(CATGCATAATTCATA,+,0.00),-11(CATGCATAATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-205	chr1	178837170	178837370	+	1.71642	NA	intron (NM_001161665, intron 5 of 14)	intron (NM_001161665, intron 5 of 14)	308145	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding	0.005000	0.333333		4(CATACATATACATG,+,0.00),4(CATACATATACATG,-,0.00),14(CATGTATATACATC,+,0.00),41(TATACATTTGCATA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1529	chr19	7382924	7383124	+	1.71642	NA	promoter-TSS (NM_001167831)	promoter-TSS (NM_001167831)	2	NM_001033139	68229	Mm.34766	NM_001033139	ENSMUSG00000024970	Spindoc	1700105P06Rik|AI846148|SPIN-DOC	spindlin interactor and repressor of chromatin binding	protein-coding	0.110000	0.726368			
ePOU_nocontrol_ChIP_peaks_unique-1660	chr2	33760496	33760696	+	1.71642	NA	intron (NM_175184, intron 7 of 9)	intron (NM_175184, intron 7 of 9)	-45220	NR_045729	320482	Mm.442057	NR_045729	ENSMUSG00000086484	Nron	A630071L07Rik|Gm24353	non-protein coding RNA, repressor of NFAT	ncRNA	0.030000	0.482587			-42(ATTTGCAAACCAAAAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-630	chr11	120673152	120673352	+	1.71642	NA	promoter-TSS (NM_001363056)	promoter-TSS (NM_001363056)	-103	NM_001363056	68938	Mm.294020	NM_026877	ENSMUSG00000025142	Aspscr1	1190006K01Rik|ASPC|ASPCR1|ASPL|ASPS|RCC17|TUG	alveolar soft part sarcoma chromosome region, candidate 1 (human)	protein-coding	0.125000	0.776119			
Oct4_nocontrol_ChIP_peaks_unique-3	chr1	130508331	130508531	+	1.71642	NA	Intergenic	Intergenic	-45687	NM_010016	13136	Mm.101591	NM_010016	ENSMUSG00000026399	Cd55	Daf|Daf-GPI|Daf1|GPI-DAF	CD55 molecule, decay accelerating factor for complement	protein-coding	0.000000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-2829	chr9	13231744	13231944	+	1.71642	NA	Intergenic	Intergenic	13897	NM_001033181	77532	Mm.459434	NM_001033181	ENSMUSG00000079083	Jrkl	C030035D04Rik|HHMJG	Jrk-like	protein-coding	0.005000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-666	chr12	34183394	34183594	+	1.71642	NA	intron (NM_001271386, intron 23 of 27)	intron (NM_001271386, intron 23 of 27)	225823	NM_011658	22160	Mm.3280	NM_011658	ENSMUSG00000035799	Twist1	M-Twist|Pde|Ska10|Ska<m10Jus>|Twist|bHLHa38|pdt	twist basic helix-loop-helix transcription factor 1	protein-coding	0.005000	0.393035			-35(AATTGAATAACAATGT,-,0.00),-15(ATGAACAAGACAAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-140	chr1	132200648	132200848	+	1.71642	NA	intron (NM_001033250, intron 1 of 3)	intron (NM_001033250, intron 1 of 3)	2660	NR_029777	723818		NR_029777	ENSMUSG00000065435	Mir135b	Mirn135b|mir-135b	microRNA 135b	ncRNA	0.005000	0.527363			
ePOU_nocontrol_ChIP_peaks_unique-1114	chr15	58922868	58923068	+	1.71642	NA	intron (NM_001368636, intron 4 of 9)	B3A|SINE|B2	10770	NM_001368428	69694	Mm.383230	NM_175151	ENSMUSG00000050891	Tatdn1	2310079P03Rik|CDA11	TatD DNase domain containing 1	protein-coding	0.005000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-2456	chr6	67552638	67552838	+	1.71642	NA	Intergenic	RMER1B|Other|Other	12961	NR_003100	75070	Mm.463364	NR_003100		4930515G16Rik	-	myc induced nuclear antigen pseudogene	pseudo	0.005000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-2139	chr4	109703544	109703744	+	1.71642	NA	intron (NM_007983, intron 1 of 18)	intron (NM_007983, intron 1 of 18)	27017	NM_007983	14084	Mm.318259	NM_007983	ENSMUSG00000010517	Faf1	AA408698|Dffrx|Fam	Fas-associated factor 1	protein-coding	0.000000	0.318408			
ePOU_nocontrol_ChIP_peaks_unique-727	chr12	80260305	80260505	+	1.71642	NA	promoter-TSS (NM_001346669)	promoter-TSS (NM_001346669)	-24	NM_001346669	109711	Mm.253564	NM_134156	ENSMUSG00000015143	Actn1	3110023F10Rik|Actn1a	actinin, alpha 1	protein-coding	0.080000	0.671642			
ePOU_nocontrol_ChIP_peaks_unique-2984	chrX	81070624	81070824	+	1.71642	NA	promoter-TSS (NM_138751)	promoter-TSS (NM_138751)	80	NM_138751	192216	Mm.490421	NM_138751	ENSMUSG00000025666	Tmem47	3010015F07Rik|AI115536|BCMP1|Tm4sf10	transmembrane protein 47	protein-coding	0.090000	0.671642			
ePOU_nocontrol_ChIP_peaks_unique-2988	chrX	92538061	92538261	+	1.71642	NA	intron (NM_173783, intron 1 of 4)	intron (NM_173783, intron 1 of 4)	48212	NM_001034103	546347	Mm.380183	NM_001034103	ENSMUSG00000071726	Gm5941	EG546347	predicted gene 5941	protein-coding	0.000000	0.333333			-9(GTTTGAATGGCAATTT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2255	chr5	64747325	64747525	+	1.71642	NA	Intergenic	Intergenic	-56098	NM_008453	16599	Mm.392759	NM_008453	ENSMUSG00000029178	Klf3	9930027G08Rik|AL024007|Bklf|Tef-2	Kruppel-like factor 3 (basic)	protein-coding	0.010000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-2050	chr4	11253821	11254021	+	1.71642	NA	intron (NM_178112, intron 1 of 27)	CpG	338	NM_001159595	72656	Mm.246713	NM_178112	ENSMUSG00000040738	Ints8	2810013E07Rik|AV063769|D130008D20Rik	integrator complex subunit 8	protein-coding	0.125000	0.711443			
merged_common-175	chr4	64306967	64307167	+	1.65092	NA	Intergenic	Intergenic	-30464	NR_151546	102633436	Mm.411637	NR_151546		Gm11217	-	predicted gene 11217	ncRNA	0.000000	0.378109	-4(AATGCATAAAGTATG,+,0.00),-4(AATGCATAAAGTATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2443	chr6	58828783	58828983	+	1.64601	NA	Intergenic	RCHARR1|DNA|hAT-Charlie	-2582	NM_001361967	73998	Mm.191892	NM_028705	ENSMUSG00000029804	Herc3	5730409F18Rik|AI646603|mKIAA0032	hect domain and RLD 3	protein-coding	0.005000	0.363184			78(CTTTGCATTACAGAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2343	chr5	131438842	131439042	+	1.64601	NA	3' UTR (NM_001363480, exon 20 of 20)	3' UTR (NM_001363480, exon 20 of 20)	-24224	NR_152164	545809	Mm.357553	NR_152164	ENSMUSG00000105387	Gm29681	Gm42590	predicted gene, 29681	ncRNA	0.030000	0.393035			51(TTTCTCTTTTGCATAT,+,0.00)
merged_common-176	chr4	83328542	83328742	+	1.64601	NA	Intergenic	Intergenic	-4453	NM_027238	69863	Mm.5540	NM_025782	ENSMUSG00000038172	Ttc39b	1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585	tetratricopeptide repeat domain 39B	protein-coding	0.015000	0.402985			52(ATTAGCATAATAATGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-865	chr13	83570339	83570539	+	1.64601	NA	intron (NM_001347581, intron 1 of 9)	L2b|LINE|L2	-3168	NM_001347577	17260	Mm.24001	NM_025282	ENSMUSG00000005583	Mef2c	5430401D19Rik|9930028G15Rik|AV011172|Mef2	myocyte enhancer factor 2C	protein-coding	0.000000	0.402985			
merged_common-231	chr8	109608581	109608781	+	1.64601	NA	promoter-TSS (NM_020046)	promoter-TSS (NM_020046)	-8	NM_020046	56749	Mm.23894	NM_020046	ENSMUSG00000031730	Dhodh	2810417D19Rik|AI834883	dihydroorotate dehydrogenase	protein-coding	0.080000	0.606965			
ePOU_nocontrol_ChIP_peaks_unique-734	chr12	84217505	84217705	+	1.64601	NA	intron (NM_001163501, intron 1 of 12)	intron (NM_001163501, intron 1 of 12)	1276	NM_001163501	238317	Mm.31256	NM_001163501	ENSMUSG00000042507	Elmsan1	9430029N19Rik|C130039O16Rik|Gm260	ELM2 and Myb/SANT-like domain containing 1	protein-coding	0.025000	0.452736			-11(CATTTGCAATGCAAAT,+,0.00),-10(ATTTGCAATGCAAATC,-,0.00)
merged_common-49	chr11	101416893	101417093	+	1.64601	NA	intron (NM_144829, intron 2 of 11)	intron (NM_144829, intron 2 of 11)	440	NM_144829	69684	Mm.146283	NM_144829	ENSMUSG00000075528	Aarsd1	1110069E20Rik|2310044P18Rik|AA589600|AlaX|AlaXp-II	alanyl-tRNA synthetase domain containing 1	protein-coding	0.035000	0.512438	-19(AATGAATAATGCATT,+,0.00),-19(AATGAATAATGCATT,-,0.00)		
merged_common-8	chr1	87176003	87176203	+	1.64601	NA	Intergenic	Intergenic	-7211	NM_027084	69453	Mm.84618	NM_027084	ENSMUSG00000036480	Prss56	1700027L20Rik	protease, serine 56	protein-coding	0.035000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-99	chr1	87213880	87214080	+	1.64601	NA	promoter-TSS (NM_023314)	promoter-TSS (NM_023314)	41	NM_001039169	26987	Mm.227183	NM_023314	ENSMUSG00000026254	Eif4e2	2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3	eukaryotic translation initiation factor 4E member 2	protein-coding	0.115000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-2514	chr6	122340566	122340766	+	1.64601	NA	promoter-TSS (NM_001271579)	promoter-TSS (NM_001271579)	-439	NM_001271579	13619	Mm.6822	NM_007905	ENSMUSG00000040669	Phc1	AW557034|Edr|Edr1|Mph1|Rae-28|rae28	polyhomeotic 1	protein-coding	0.035000	0.447761			73(ATTTGCAACACAAATT,-,0.00)
merged_common-200	chr5	136198952	136199152	+	1.64601	NA	promoter-TSS (NM_025774)	promoter-TSS (NM_025774)	-98	NM_025774	66801	Mm.425295	NM_025774	ENSMUSG00000039737	Prkrip1	8430424D23Rik|C114	Prkr interacting protein 1 (IL11 inducible)	protein-coding	0.075000	0.532338		20(CTTGAATATTCATG,+,0.00),20(CTTGAATATTCATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2197	chr5	13351602	13351802	+	1.64601	NA	Intergenic	Intergenic	-45082	NM_001243072	20346	Mm.372039	NM_009152	ENSMUSG00000028883	Sema3a	Hsema-I|SEMA1|SemD|Semad|coll-1	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	protein-coding	0.005000	0.373134			-47(ATTAAAATGATAATGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-954	chr14	40883402	40883602	+	1.64601	NA	intron (NM_177816, intron 1 of 7)	intron (NM_177816, intron 1 of 7)	9812	NM_177816	328381	Mm.235694	NM_177816	ENSMUSG00000037833	Sh2d4b	A430109M18Rik|D030001E08	SH2 domain containing 4B	protein-coding	0.005000	0.383085		65(CATGTTTATGCATA,+,0.00)	64(ACATGTTTATGCATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2612	chr7	83633631	83633831	+	1.58251	NA	intron (NM_023377, intron 3 of 5)	MER3|DNA|hAT-Charlie	1714	NM_023377	170460	Mm.357953	NM_023377	ENSMUSG00000046027	Stard5	2310058G22Rik|AI607880|D7Ertd152e	StAR-related lipid transfer (START) domain containing 5	protein-coding	0.015000	0.437811	12(AATGAATTATTCATT,+,0.00),12(AATGAATTATTCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1641	chr2	23124467	23124667	+	1.58251	NA	intron (NM_025979, intron 9 of 11)	intron (NM_025979, intron 9 of 11)	31457	NM_025979	67121	Mm.253721	NM_025979	ENSMUSG00000026779	Mastl	2700091H24Rik|C88295|GW|GWL|MAST-L|THC2	microtubule associated serine/threonine kinase-like	protein-coding	0.000000	0.303483			4(ATTTGATTAACAAAAA,-,0.00),48(GTTTGAATGACAATGG,-,0.00),71(ATTTGAATAGCAAGTC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1145	chr15	84923357	84923557	+	1.58251	NA	promoter-TSS (NM_016714)	promoter-TSS (NM_016714)	29	NM_016714	18141	Mm.28379	NM_016714	ENSMUSG00000016619	Nup50	1700030K07Rik|AI413123|Npap60	nucleoporin 50	protein-coding	0.080000	0.606965			
ePOU_nocontrol_ChIP_peaks_unique-2483	chr6	96757503	96757703	+	1.58251	NA	Intergenic	Intergenic	302808	NM_177233	320701	Mm.131700	NM_177233	ENSMUSG00000046500	Tafa4	C130034I18Rik|Fam19a4|Fam19a4 Tafa-4|Tafa-4	TAFA chemokine like family member 4	protein-coding	0.010000	0.383085			-81(CAATTGCAATTCAAAT,+,0.00),57(TTTTTGTCATAGTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-678	chr12	39466754	39466954	+	1.58251	NA	Intergenic	L1_Mur1|LINE|L1	570522	NM_007487	11861	Mm.12723	NM_007487	ENSMUSG00000047446	Arl4a	AI467555|Arl4	ADP-ribosylation factor-like 4A	protein-coding	0.005000	0.358209		7(TATGAATATGAATG,+,0.00),7(TATGAATATGAATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-729	chr12	80853746	80853946	+	1.58251	NA	intron (NM_001242419, intron 3 of 6)	intron (NM_001242419, intron 3 of 6)	63314	NM_178682	217684	Mm.341776	NM_178682	ENSMUSG00000021133	Susd6	4933426M11Rik|mKIAA0247	sushi domain containing 6	protein-coding	0.010000	0.472637			
merged_common-161	chr3	53956089	53956289	+	1.58251	NA	Intergenic	L3|LINE|CR1	-92382	NM_026435	67890	Mm.23067	NM_026435	ENSMUSG00000027746	Ufm1	1810045K17Rik|AI132708|AI463323|Gm10726	ubiquitin-fold modifier 1	protein-coding	0.015000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-377	chr10	99201819	99202019	+	1.58251	NA	Intergenic	Intergenic	-61312	NM_026268	67603	Mm.1791	NM_026268	ENSMUSG00000019960	Dusp6	1300019I03Rik|MKP-3|MKP3|PYST1	dual specificity phosphatase 6	protein-coding	0.000000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-2169	chr4	137388541	137388741	+	1.58251	NA	Intergenic	Intergenic	21150	NM_001126318	242711	Mm.475541	NM_001126318	ENSMUSG00000078520	Cela3a	Gm13011	chymotrypsin-like elastase family, member 3A	protein-coding	0.040000	0.592040			
ePOU_nocontrol_ChIP_peaks_unique-1495	chr18	71759898	71760098	+	1.58251	NA	intron (NM_007831, intron 5 of 28)	intron (NM_007831, intron 5 of 28)	591071	NM_007831	13176	Mm.167882	NM_007831	ENSMUSG00000060534	Dcc	C030036D22Rik|Igdcc1	deleted in colorectal carcinoma	protein-coding	0.005000	0.278607	3(TATGCATATTTCAAG,-,0.00)		31(ATTTAAATAGAAATAG,-,0.00)
merged_common-47	chr11	100939498	100939698	+	1.58251	NA	promoter-TSS (NM_213660)	promoter-TSS (NM_213660)	-58	NM_213660	20848	Mm.249934	NM_011486	ENSMUSG00000004040	Stat3	1110034C02Rik|AW109958|Aprf	signal transducer and activator of transcription 3	protein-coding	0.045000	0.601990	-68(CATGCATAATTAAGG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-157	chr1	150570805	150571005	+	1.58251	NA	intron (NM_001024720, intron 105 of 106)	intron (NM_001024720, intron 105 of 106)	-104740	NM_001110146	96875	Mm.174256	NM_021400	ENSMUSG00000006014	Prg4	CACP|DOL54|JCAP|MSF|SZP|lubricin	proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)	protein-coding	0.005000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-2032	chr3	152210230	152210430	+	1.58251	NA	promoter-TSS (NM_001355367)	promoter-TSS (NM_001355367)	-92	NM_001355368	51886	Mm.278922	NM_057172	ENSMUSG00000028034	Fubp1	9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4	far upstream element (FUSE) binding protein 1	protein-coding	0.110000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-2344	chr5	131526825	131527025	+	1.58251	NA	intron (NM_001363480, intron 6 of 19)	intron (NM_001363480, intron 6 of 19)	-112207	NR_152164	545809	Mm.357553	NR_152164	ENSMUSG00000105387	Gm29681	Gm42590	predicted gene, 29681	ncRNA	0.005000	0.432836			-12(ATTTCCATAGGAAGGC,-,0.00),6(ATTTCCATGACAAAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-41	chr1	39424522	39424722	+	1.58251	NA	intron (NM_001357522, intron 2 of 18)	intron (NM_001357522, intron 2 of 18)	54125	NM_018775	54610	Mm.387293	NM_018775	ENSMUSG00000003134	Tbc1d8	AD3|HBLP1|VRP	TBC1 domain family, member 8	protein-coding	0.010000	0.338308			-52(ATTATCATGAGAAACA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2915	chr9	83477744	83477944	+	1.58251	NA	Intergenic	RLTR13B4|LTR|ERVK	-36717	NM_029434	75782	Mm.199698	NM_027448	ENSMUSG00000032258	Lca5	4930431B11Rik|5730406O13Rik|AV274874|ORF64	Leber congenital amaurosis 5 (human)	protein-coding	0.000000	0.343284	56(ATTGCATTATTCATG,+,0.00),56(ATTGCATTATTCATG,-,0.00)		-92(ATTTAAAAAAAAAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1450	chr18	38370566	38370766	+	1.58251	NA	Intergenic	Intergenic	-31673	NM_011937	26384	Mm.22374	NM_011937	ENSMUSG00000052102	Gnpda1	GNPDA|Gnp1|Gnpi|oscillin	glucosamine-6-phosphate deaminase 1	protein-coding	0.000000	0.368159	86(GGTGAATTATTCATA,+,0.00),86(GGTGAATTATTCATA,-,0.00)		-33(ATTTACTTGTCAAAGG,-,0.00)
merged_common-208	chr6	83054525	83054725	+	1.58251	NA	promoter-TSS (NM_019752)	promoter-TSS (NM_019752)	-54	NM_019752	64704	Mm.21880	NM_019752	ENSMUSG00000068329	Htra2	AI481710|Omi|Prss25|mnd2	HtrA serine peptidase 2	protein-coding	0.095000	0.656716			
ePOU_nocontrol_ChIP_peaks_unique-2070	chr4	34734647	34734847	+	1.58251	NA	Intergenic	RLTR25B|LTR|ERVK	-4541	NM_027041	69329	Mm.389548	NM_027041	ENSMUSG00000028294	Cfap206	1700003M02Rik|AU024269	cilia and flagella associated protein 206	protein-coding	0.015000	0.412935			-25(CTTTGCAAAAGAATCC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1691	chr2	60364044	60364244	+	1.58251	NA	intron (NM_013825, intron 4 of 34)	Lx9|LINE|L1	19129	NM_013825	17076	Mm.2074	NM_013825	ENSMUSG00000026980	Ly75	CD205|DEC-205|DEC205	lymphocyte antigen 75	protein-coding	0.015000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-1361	chr17	46812507	46812707	+	1.58251	NA	intron (NM_001100452, intron 5 of 10)	intron (NM_001100452, intron 5 of 10)	18806	NM_001100452	210982	Mm.37642	NM_001100452	ENSMUSG00000036568	Bicral	Gltscr1l|mKIAA0240	BRD4 interacting chromatin remodeling complex associated protein like	protein-coding	0.000000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-2154	chr4	126465897	126466097	+	1.58251	NA	intron (NM_001317173, intron 1 of 18)	intron (NM_001317173, intron 1 of 18)	2586	NM_001317174	236511	Mm.30800	NM_153403	ENSMUSG00000041530	Ago1	Eif2c1	argonaute RISC catalytic subunit 1	protein-coding	0.015000	0.597015			-23(ACTTTGTGATGCAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2187	chr4	155220593	155220793	+	1.58251	NA	intron (NM_011385, intron 1 of 6)	intron (NM_011385, intron 1 of 6)	1842	NM_001357191	20481	Mm.28520	NM_011385	ENSMUSG00000029050	Ski	2310012I02Rik|2610001A11Rik|AA062172|AA589460|BC004088	ski sarcoma viral oncogene homolog (avian)	protein-coding	0.000000	0.348259		41(GATGCATATGCAAA,+,0.00),41(GATGCATATGCAAA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-155	chr1	147187335	147187535	+	1.58251	NA	Intergenic	Intergenic	689748	NM_001145807	215378	Mm.441817	NM_153539	ENSMUSG00000035131	Brinp3	B830045N13Rik|Fam5c	bone morphogenetic protein/retinoic acid inducible neural specific 3	protein-coding	0.010000	0.407960	2(CATGCATTATTCATA,+,0.00),2(CATGCATTATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1584	chr19	43009133	43009333	+	1.58251	NA	intron (NM_001081257, intron 4 of 11)	intron (NM_001081257, intron 4 of 11)	-229255	NM_001346703	192236	Mm.218381	NM_019424	ENSMUSG00000025188	Hps1	6030422N11Rik|BB405864|Gm21361|Hps|ep	HPS1, biogenesis of lysosomal organelles complex 3 subunit 1	protein-coding	0.000000	0.442786			-38(GCATTGAGATGCAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-82	chr1	71806986	71807186	+	1.58251	NA	Intergenic	Intergenic	-81026	NR_027658	667931	Mm.214128	NR_027658	ENSMUSG00000099707	Gm8883	EG667931|Gm554	predicted gene 8883	ncRNA	0.005000	0.427861			-44(ATTTGAATGTAAATGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1268	chr16	72756223	72756423	+	1.58251	NA	intron (NM_019413, intron 2 of 28)	intron (NM_019413, intron 2 of 28)	93174	NM_019413	19876	Mm.310772	NM_019413	ENSMUSG00000022883	Robo1	AW494633|AW742721|DUTT1|Gm310	roundabout guidance receptor 1	protein-coding	0.005000	0.388060			-41(TTGTTGTTATGCTAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2856	chr9	31867868	31868068	+	1.58251	NA	intron (NM_013800, intron 1 of 3)	intron (NM_013800, intron 1 of 3)	45317	NM_013800	12023	Mm.261044	NM_013800	ENSMUSG00000032033	Barx2	2310006E12Rik|Barx2b	BarH-like homeobox 2	protein-coding	0.005000	0.358209	23(AATGCATAATTCTTA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1694	chr2	61533294	61533494	+	1.58251	NA	Intergenic	RMER1B|Other|Other	-45192	NM_011529	21353	Mm.244393	NM_011529	ENSMUSG00000064289	Tank	C86182|E430026L09Rik|I-TRAF	TRAF family member-associated Nf-kappa B activator	protein-coding	0.010000	0.467662			39(TCATTGCAATGCACAT,+,0.00),53(ATTTGCAAGTAAAAAT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1653	chr2	30725682	30725882	+	1.58251	NA	Intergenic	Intergenic	4572	NR_037272	100526499		NR_037272	ENSMUSG00000093091	Mir3089	mir-3089|mmu-mir-3089	microRNA 3089	ncRNA	0.095000	0.681592	7(CATACATAATTCATT,+,0.00),7(CATACATAATTCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-433	chr11	19835417	19835617	+	1.58251	NA	Intergenic	Intergenic	-88925	NM_033523	114716	Mm.266627	NM_033523	ENSMUSG00000045671	Spred2	C79158	sprouty-related EVH1 domain containing 2	protein-coding	0.010000	0.512438			
Oct4_nocontrol_ChIP_peaks_unique-16	chr10	91181743	91181943	+	1.58251	NA	Intergenic	CpG	-10224	NM_011605	21917	Mm.159684	NM_011605	ENSMUSG00000019961	Tmpo	5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP	thymopoietin	protein-coding	0.120000	0.681592			
ePOU_nocontrol_ChIP_peaks_unique-2101	chr4	67682779	67682979	+	1.58251	NA	Intergenic	Intergenic	639082	NR_151548	102633975		NR_151548		Gm12911	-	predicted gene 12911	ncRNA	0.005000	0.278607			40(ATTAGCATATGAATCG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-612	chr11	115536385	115536585	+	1.58251	NA	promoter-TSS (NM_133354)	promoter-TSS (NM_133354)	-255	NM_133354	170930	Mm.29923	NM_133354	ENSMUSG00000020738	Sumo2	SUMO-2|Smt3A|Smt3b|Smt3h2	small ubiquitin-like modifier 2	protein-coding	0.105000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-965	chr14	50995605	50995805	+	1.58251	NA	Intergenic	Intergenic	-12046	NM_001162863	75019	Mm.318775	NM_029145	ENSMUSG00000021872	Rnase10	4930474F22Rik|Rah1	ribonuclease, RNase A family, 10 (non-active)	protein-coding	0.000000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-1088	chr15	38159099	38159299	+	1.58251	NA	Intergenic	Intergenic	-60004	NM_008757	18285	Mm.252830	NM_008757	ENSMUSG00000061923	Odf1	-	outer dense fiber of sperm tails 1	protein-coding	0.005000	0.303483			
ePOU_nocontrol_ChIP_peaks_unique-2439	chr6	55203574	55203774	+	1.58251	NA	intron (NM_177883, intron 1 of 10)	intron (NM_177883, intron 1 of 10)	291	NM_001142781	330323	Mm.268997	NM_177883	ENSMUSG00000038022	Mindy4	C330043M08Rik|Fam188b|Gm1406	MINDY lysine 48 deubiquitinase 4	protein-coding	0.025000	0.537313			
ePOU_nocontrol_ChIP_peaks_unique-1646	chr2	25608300	25608500	+	1.58251	NA	promoter-TSS (NM_001024616)	promoter-TSS (NM_001024616)	81	NM_001024616	227624	Mm.29600	NM_001024616	ENSMUSG00000015087	Rabl6	B230208H17Rik|Rbel1|Rbel1a|Rbel1b|parf	RAB, member RAS oncogene family-like 6	protein-coding	0.140000	0.756219			
ePOU_nocontrol_ChIP_peaks_unique-330	chr10	67537601	67537801	+	1.58251	NA	promoter-TSS (NM_010118)	promoter-TSS (NM_010118)	-168	NM_010118	13654	Mm.290421	NM_010118	ENSMUSG00000037868	Egr2	Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6	early growth response 2	protein-coding	0.075000	0.656716			
ePOU_nocontrol_ChIP_peaks_unique-424	chr11	11941316	11941516	+	1.58251	NA	intron (NM_001177629, intron 10 of 15)	intron (NM_001177629, intron 10 of 15)	-43272	NM_001190448	13195	Mm.12906	NM_016672	ENSMUSG00000020182	Ddc	Aadc	dopa decarboxylase	protein-coding	0.000000	0.378109			-11(ATTAACATAATAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2914	chr9	83101746	83101946	+	1.58251	NA	Intergenic	Intergenic	44761	NM_175074	94353	Mm.244426	NM_026122	ENSMUSG00000066456	Hmgn3	1110002A15Rik|6330514M13Rik|BB071015|TRIP7	high mobility group nucleosomal binding domain 3	protein-coding	0.005000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-91	chr1	77496992	77497192	+	1.58251	NA	promoter-TSS (NR_105770)	promoter-TSS (NR_105770)	-324	NR_105770	102465180		NR_105770	ENSMUSG00000099141	Mir6352	Gm27481|mmu-mir-6352	microRNA 6352	ncRNA	0.030000	0.537313			
ePOU_nocontrol_ChIP_peaks_unique-1755	chr2	116975871	116976071	+	1.58251	NA	Intergenic	CpG	75819	NR_040335	320975	Mm.132509	NR_040335	ENSMUSG00000085316	D330050G23Rik	-	RIKEN cDNA D330050G23 gene	ncRNA	0.100000	0.706468			
ePOU_nocontrol_ChIP_peaks_unique-2428	chr6	47835634	47835834	+	1.58251	NA	promoter-TSS (NM_027477)	promoter-TSS (NM_027477)	73	NM_027477	272347	Mm.169059	NM_027477	ENSMUSG00000062519	Zfp398	5730513I23Rik	zinc finger protein 398	protein-coding	0.125000	0.711443			
ePOU_nocontrol_ChIP_peaks_unique-985	chr14	63494758	63494958	+	1.58251	NA	intron (NM_021480, intron 6 of 8)	intron (NM_021480, intron 6 of 8)	14234	NM_021480	58865	Mm.354229	NM_021480	ENSMUSG00000021953	Tdh	-	L-threonine dehydrogenase	protein-coding	0.015000	0.417910			
merged_common-3	chr1	54896707	54896907	+	1.58251	NA	intron (NM_001081433, intron 1 of 27)	intron (NM_001081433, intron 1 of 27)	29580	NM_001081433	329154	Mm.397910	NM_001081433	ENSMUSG00000052331	Ankrd44	4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B	ankyrin repeat domain 44	protein-coding	0.000000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-912	chr13	114734649	114734849	+	1.58251	NA	Intergenic	Intergenic	-83488	NM_001113374	17434	Mm.19027	NM_013826	ENSMUSG00000015536	Mocs2	AI415403	molybdenum cofactor synthesis 2	protein-coding	0.015000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-322	chr10	58477319	58477519	+	1.58251	NA	exon (NM_011240, exon 20 of 29)	exon (NM_011240, exon 20 of 29)	-20518	NM_001162956	76138	Mm.211744	NM_001162956	ENSMUSG00000038010	Ccdc138	6230424H07Rik|BC042726	coiled-coil domain containing 138	protein-coding	0.000000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-2016	chr3	144142741	144142941	+	1.58251	NA	Intergenic	Intergenic	59491	NM_001161770	16911	Mm.29187	NM_010723	ENSMUSG00000028266	Lmo4	A730077C12Rik|Crp3|Etohi4	LIM domain only 4	protein-coding	0.010000	0.328358		-15(TATGCATTTTCATA,+,0.00),-15(TATGCATTTTCATA,-,0.00)	-99(ATTTAAAAAAAAAAAA,-,0.00)
Oct4_nocontrol_ChIP_peaks_unique-70	chr4	133212586	133212786	+	1.58251	NA	promoter-TSS (NM_008154)	promoter-TSS (NM_008154)	-150	NM_008154	14748	Mm.4721	NM_008154	ENSMUSG00000049649	Gpr3	Gpcr20|Gpcr21|Gpcr3	G-protein coupled receptor 3	protein-coding	0.115000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-1679	chr2	51431689	51431889	+	1.58251	NA	intron (NR_130155, intron 2 of 2)	intron (NR_130155, intron 2 of 2)	6111	NR_130155	73375	Mm.396227	NR_130155	ENSMUSG00000086007	1700057H21Rik	-	RIKEN cDNA 1700057H21 gene	ncRNA	0.005000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-1563	chr19	32267802	32268002	+	1.58251	NA	intron (NM_001168525, intron 2 of 9)	intron (NM_001168525, intron 2 of 9)	-56889	NM_001168526	208449	Mm.329810	NM_144792	ENSMUSG00000040451	Sgms1	9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23	sphingomyelin synthase 1	protein-coding	0.005000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-397	chr10	116562146	116562346	+	1.58251	NA	intron (NM_001037846, intron 1 of 15)	intron (NM_001037846, intron 1 of 15)	18290	NM_001359252	72068	Mm.351553	NM_028082	ENSMUSG00000020166	Cnot2	2600016M12Rik|2810470K03Rik|AA537049|AA959607|AW557563|C79650	CCR4-NOT transcription complex, subunit 2	protein-coding	0.005000	0.348259			-47(TCATTGTAATGAATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2812	chr8	122775308	122775508	+	1.58251	NA	promoter-TSS (NM_144932)	promoter-TSS (NM_144932)	-78	NM_144932	257633	Mm.334875	NM_144932	ENSMUSG00000015016	Acsf3	BB101783	acyl-CoA synthetase family member 3	protein-coding	0.065000	0.532338			
ePOU_nocontrol_ChIP_peaks_unique-2388	chr6	13295434	13295634	+	1.58251	NA	Intergenic	Intergenic	-70569	NM_001013757	232585	Mm.389082	NM_001013757	ENSMUSG00000079679	Vwde	Gm467	von Willebrand factor D and EGF domains	protein-coding	0.005000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-1002	chr14	72983524	72983724	+	1.58251	NA	Intergenic	Intergenic	-41979	NR_027860	668489	Mm.158324	NR_027860		Gm9199	EG668489	glycine cleavage system protein H (aminomethyl carrier) pseudogene	pseudo	0.025000	0.527363			
ePOU_nocontrol_ChIP_peaks_unique-431	chr11	17978666	17978866	+	1.58251	NA	Intergenic	Intergenic	24796	NR_131916	102633673	Mm.396603	NR_131915	ENSMUSG00000086468	Etaa1os	2900053O20Rik|4930542E09Rik	Ewing tumor-associated antigen 1, opposite strand	ncRNA	0.000000	0.243781	-1(TATGCTTTATTCATA,+,0.00),-1(TATGCTTTATTCATA,-,0.00)		3(CTTTATTCATACAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2733	chr8	56615708	56615908	+	1.58251	NA	Intergenic	Intergenic	64654	NM_015791	50753	Mm.251174	NM_015791	ENSMUSG00000038206	Fbxo8	Fbx8	F-box protein 8	protein-coding	0.005000	0.303483			21(TTATTCTTTTGAATAT,+,0.00)
merged_common-38	chr11	40473578	40473778	+	1.58251	NA	Intergenic	Intergenic	219004	NM_134017	108645	Mm.293771	NM_134017	ENSMUSG00000042032	Mat2b	1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR	methionine adenosyltransferase II, beta	protein-coding	0.010000	0.308458			-42(ATAAAAATGAGAAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1389	chr17	79824506	79824706	+	1.58251	NA	Intergenic	Intergenic	71517	NM_019717	56298	Mm.175403	NM_019717	ENSMUSG00000059811	Atl2	2010110I21Rik|AA407293|AV334690|Aip-2|Arl6ip2	atlastin GTPase 2	protein-coding	0.005000	0.398010		-2(GTTGAATATTCATA,+,0.00),-2(GTTGAATATTCATA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1388	chr17	78736639	78736839	+	1.58251	NA	promoter-TSS (NM_011500)	promoter-TSS (NM_011500)	-178	NM_011500	268980	Mm.311915	NM_011500	ENSMUSG00000024077	Strn	AU022939|D130055P19	striatin, calmodulin binding protein	protein-coding	0.125000	0.726368			
ePOU_nocontrol_ChIP_peaks_unique-966	chr14	51065095	51065295	+	1.58251	NA	Intergenic	tRNA-Thr-ACA|tRNA|tRNA	6247	NM_207558	404319	Mm.377276	NM_207558	ENSMUSG00000035932	Olfr750	GA_x5J8B7W5WBF-6267395-6266441|GA_x6K02T2PMLR-6808276-6807281|MOR103-18	olfactory receptor 750	protein-coding	0.040000	0.477612			
ePOU_nocontrol_ChIP_peaks_unique-1956	chr3	95343780	95343980	+	1.58251	NA	intron (NM_001163641, intron 8 of 21)	RLTR13B3|LTR|ERVK	13322	NM_018877	84505	Mm.490259	NM_018877	ENSMUSG00000015697	Setdb1	AU022152|ESET|KMT1E|mKIAA0067	SET domain, bifurcated 1	protein-coding	0.015000	0.467662			
merged_common-125	chr18	56152683	56152883	+	1.58251	NA	Intergenic	Intergenic	-247557	NM_001360917	107022	Mm.24356	NM_026240	ENSMUSG00000001700	Gramd3	9030613F08Rik|9130427A09Rik|AW061306|Gramd2b|NS3TP2	GRAM domain containing 3	protein-coding	0.010000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-339	chr10	74749358	74749558	+	1.58251	NA	Intergenic	Intergenic	-217719	NM_010311	14687	Mm.32595	NM_010311	ENSMUSG00000040009	Gnaz	AI847979|Gz	guanine nucleotide binding protein, alpha z subunit	protein-coding	0.005000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-900	chr13	109671674	109671874	+	1.58251	NA	intron (NM_011056, intron 3 of 16)	ORSL-2b|DNA|hAT-Tip100	-232035	NR_035442	100316683		NR_035442	ENSMUSG00000084651	Mir1904	Mirn1904|mmu-mir-1904	microRNA 1904	ncRNA	0.010000	0.368159			
merged_common-19	chr10	9272268	9272468	+	1.58251	NA	Intergenic	Intergenic	-386298	NM_175155	70097	Mm.338275	NM_175155	ENSMUSG00000015305	Sash1	1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790	SAM and SH3 domain containing 1	protein-coding	0.015000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-2427	chr6	47788267	47788467	+	1.58251	NA	Intergenic	Intergenic	15285	NR_030485	735289		NR_030485	ENSMUSG00000076060	Mir704	Mirn704|mir-704|mmu-mir-704	microRNA 704	ncRNA	0.025000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-1125	chr15	71133578	71133778	+	1.58251	NA	Intergenic	UCON28c|Unknown|Unknown	594160	NM_177819	70363	Mm.126450	NM_177819	ENSMUSG00000036800	Fam135b	1700010C24Rik|A830008O07Rik	family with sequence similarity 135, member B	protein-coding	0.005000	0.363184	-31(CATGAATTATGCATG,+,0.00),-31(CATGAATTATGCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2133	chr4	104813677	104813877	+	1.58251	NA	Intergenic	ORR1C1|LTR|ERVL-MaLR	47460	NM_133882	110382	Mm.87072	NM_133882	ENSMUSG00000029656	C8b	4930439B20Rik|AI595927	complement component 8, beta polypeptide	protein-coding	0.010000	0.467662			-45(GTATGAATAAGAATGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1980	chr3	108134944	108135144	+	1.58251	NA	intron (NM_010306, intron 1 of 8)	intron (NM_010306, intron 1 of 8)	11108	NM_010306	14679	Mm.271703	NM_010306	ENSMUSG00000000001	Gnai3	AI158965|AW537698|Galphai3|Gnai-3	guanine nucleotide binding protein (G protein), alpha inhibiting 3	protein-coding	0.020000	0.437811			21(CCTTTTTCTTTGAAAG,+,0.00),52(CCATTTTGATGCTAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-200	chr1	175625442	175625642	+	1.58251	NA	promoter-TSS (NM_010209)	promoter-TSS (NM_010209)	93	NM_010209	14194	Mm.41502	NM_010209	ENSMUSG00000026526	Fh1	Fh|Fh-1	fumarate hydratase 1	protein-coding	0.135000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-2147	chr4	119539624	119539824	+	1.58251	NA	promoter-TSS (NM_001290696)	promoter-TSS (NM_001290696)	63	NM_001290696	230700	Mm.259227	NM_172699	ENSMUSG00000032998	Foxj3	C330039G02Rik|Fhd6	forkhead box J3	protein-coding	0.160000	0.791045			
ePOU_nocontrol_ChIP_peaks_unique-859	chr13	79063017	79063217	+	1.58251	NA	Intergenic	Intergenic	-864244	NM_010151	13865	Mm.439653	NM_010151	ENSMUSG00000069171	Nr2f1	COUP-TF1|COUP-TFI|COUPTFA|EAR-3|EAR3|Erbal3|SVP44|Tcfcoup1	nuclear receptor subfamily 2, group F, member 1	protein-coding	0.005000	0.303483			
merged_common-33	chr11	7284957	7285157	+	1.58251	NA	Intergenic	Intergenic	-71134	NM_008343	16009	Mm.29254	NM_008343	ENSMUSG00000020427	Igfbp3	AI649005|IGFBP-3|IGgfbp3	insulin-like growth factor binding protein 3	protein-coding	0.015000	0.487562			
Oct4_nocontrol_ChIP_peaks_unique-103	chr9	106429393	106429593	+	1.58251	NA	promoter-TSS (NM_009082)	promoter-TSS (NM_009082)	82	NM_001324534	19944	Mm.288696	NM_009082	ENSMUSG00000048758	Rpl29	Rpl43	ribosomal protein L29	protein-coding	0.075000	0.597015			
ePOU_nocontrol_ChIP_peaks_unique-2847	chr9	23441523	23441723	+	1.58251	NA	intron (NM_028472, intron 13 of 14)	intron (NM_028472, intron 13 of 14)	218547	NM_028472	73230	Mm.335020	NM_028472	ENSMUSG00000031963	Bmper	3110056H04Rik|CV-2|Crim3|Cv2	BMP-binding endothelial regulator	protein-coding	0.010000	0.288557	5(AATGCATTATGTATA,+,0.00),5(AATGCATTATGTATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-781	chr13	6473816	6474016	+	1.58251	NA	Intergenic	Intergenic	-74241	NM_001360106	69617	Mm.41933	NM_145131	ENSMUSG00000021193	Pitrm1	2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104	pitrilysin metallepetidase 1	protein-coding	0.005000	0.437811	55(CATGAATAACTCATG,+,0.00),55(CATGAATAACTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-224	chr1	185203983	185204183	+	1.58251	NA	promoter-TSS (NM_001163754)	promoter-TSS (NM_001163754)	-85	NM_001163754	98732	Mm.275841	NM_172649	ENSMUSG00000039318	Rab3gap2	1110059F07Rik|2010002H18Rik|5830469C09|AI851069|AW743433|RAB3-GAP150|mKIAA0839	RAB3 GTPase activating protein subunit 2	protein-coding	0.125000	0.716418			
merged_common-108	chr16	21995455	21995655	+	1.58251	NA	promoter-TSS (NM_001289582)	promoter-TSS (NM_001289582)	-13	NM_153404	239759	Mm.33192	NM_153404	ENSMUSG00000044626	Liph	C130037N08Rik|D16Wsu119e|H06|Lpdlr|P3|PLA1B|lpd1|lpd2|mPA-PLA1	lipase, member H	protein-coding	0.025000	0.492537			
ePOU_nocontrol_ChIP_peaks_unique-889	chr13	99515136	99515336	+	1.58251	NA	intron (NM_008634, intron 1 of 6)	CpG	1366	NM_008634	17755	Mm.4173	NM_008634	ENSMUSG00000052727	Map1b	A230055D22|AI843217|LC1|MAP5|Mtap-5|Mtap1b|Mtap5	microtubule-associated protein 1B	protein-coding	0.100000	0.731343			
ePOU_nocontrol_ChIP_peaks_unique-1968	chr3	101600442	101600642	+	1.58251	NA	intron (NM_144900, intron 1 of 22)	intron (NM_144900, intron 1 of 22)	4165	NM_144900	11928	Mm.193670	NM_144900	ENSMUSG00000033161	Atp1a1	Atpa-1|BC010319	ATPase, Na+/K+ transporting, alpha 1 polypeptide	protein-coding	0.010000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-945	chr14	30196128	30196328	+	1.58251	NA	intron (NM_001083616, intron 4 of 46)	intron (NM_001083616, intron 4 of 46)	157258	NM_001302637	12289	Mm.9772	NM_028981	ENSMUSG00000015968	Cacna1d	8430418G19Rik|C79217|Cach3|Cacn4|Cacnl1a2|Cav1.3|Cchl1a|Cchl1a2|D-LTCC	calcium channel, voltage-dependent, L type, alpha 1D subunit	protein-coding	0.015000	0.393035			-7(GTTTTGTTATTTAAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2145	chr4	119029746	119029946	+	1.58251	NA	Intergenic	LTR107_Mam|LTR|LTR	39265	NR_131914	433751	Mm.224312	NR_131914	ENSMUSG00000066060	Gm12866	-	predicted gene 12866	ncRNA	0.020000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-1938	chr3	83980283	83980483	+	1.58251	NA	intron (NM_172681, intron 3 of 34)	intron (NM_172681, intron 3 of 34)	59778	NM_172681	229473	Mm.28838	NM_172681	ENSMUSG00000033767	Tmem131l	D930015E06Rik|Kiaa0922|mKIAA0922	transmembrane 131 like	protein-coding	0.005000	0.437811			-1(CCACTCATATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2227	chr5	33554538	33554738	+	1.58251	NA	Intergenic	L1M5|LINE|L1	72873	NM_001359461	74504	Mm.294695	NM_178390	ENSMUSG00000037339	Fam53a	2410018C17Rik|5430419M09Rik|Dntnp	family with sequence similarity 53, member A	protein-coding	0.005000	0.303483			
ePOU_nocontrol_ChIP_peaks_unique-357	chr10	83242230	83242430	+	1.58251	NA	intron (NM_177388, intron 10 of 10)	intron (NM_177388, intron 10 of 10)	95487	NM_177388	338365	Mm.67073	NM_177388	ENSMUSG00000034591	Slc41a2	A230035L05Rik|SLC41A1-L1	solute carrier family 41, member 2	protein-coding	0.010000	0.383085	-25(TATGAAATATGCATA,+,0.00),-25(TATGAAATATGCATA,-,0.00)		71(ATTTAAATAAATATGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1163	chr15	98662894	98663094	+	1.58251	NA	promoter-TSS (NM_001080981)	promoter-TSS (NM_001080981)	-105	NM_001080981	74351	Mm.45725	NM_001080981	ENSMUSG00000003360	Ddx23	3110082M05Rik|4921506D17Rik	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	protein-coding	0.070000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-2497	chr6	105482949	105483149	+	1.58251	NA	non-coding (NR_040297, exon 3 of 3)	non-coding (NR_040297, exon 3 of 3)	9619	NR_040297	100503536	Mm.366960	NR_040297	ENSMUSG00000108237	Gm19757	-	predicted gene, 19757	ncRNA	0.000000	0.338308	-5(CATGCATTATTCATT,+,0.00),-5(CATGCATTATTCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1583	chr19	42164428	42164628	+	1.58251	NA	Intergenic	Intergenic	-6039	NM_177319	319740	Mm.287359	NM_177319	ENSMUSG00000018820	Zfyve27	2210011N02Rik|9530077C24Rik|AI426636|AI593546|AI835681	zinc finger, FYVE domain containing 27	protein-coding	0.015000	0.407960			44(ATTTACATACAAAAGA,-,0.00)
merged_common-57	chr12	25416024	25416224	+	1.58251	NA	Intergenic	Intergenic	286950	NR_045844	432641	Mm.112955	NR_045844		Gm17746	-	predicted gene, 17746	ncRNA	0.010000	0.308458			
ePOU_nocontrol_ChIP_peaks_unique-1661	chr2	34078717	34078917	+	1.58251	NA	intron (NR_130173, intron 1 of 3)	intron (NR_130173, intron 1 of 3)	28918	NR_130173	329387	Mm.125817	NR_130173	ENSMUSG00000087461	C230014O12Rik	-	RIKEN cDNA C230014O12 gene	ncRNA	0.010000	0.472637	-93(TGTAAATAATGCATG,+,0.00),-93(TGTAAATAATGCATG,-,0.00)		
merged_common-140	chr2	55210031	55210231	+	1.58251	NA	Intergenic	RLTR35B_MM|LTR|ERVL	-225839	NM_001304810	16519	Mm.5127	NM_008426	ENSMUSG00000026824	Kcnj3	GIRK-1|GIRK1|Kcnf3|Kir3.1	potassium inwardly-rectifying channel, subfamily J, member 3	protein-coding	0.005000	0.447761			
ePOU_nocontrol_ChIP_peaks_unique-2262	chr5	65835210	65835410	+	1.58251	NA	Intergenic	RLTR13B4|LTR|ERVK	-25910	NM_001363454	74734	Mm.20323	NM_001081105	ENSMUSG00000029204	Rhoh	5830400A04Rik|AU019774|Arhh	ras homolog family member H	protein-coding	0.010000	0.447761	-70(ATTGCATTATTCATG,+,0.00),-70(ATTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-299	chr10	39392460	39392660	+	1.58251	NA	intron (NM_001122893, intron 1 of 13)	(CATATA)n|Simple_repeat|Simple_repeat	22761	NM_008054	14360	Mm.4848	NM_008054	ENSMUSG00000019843	Fyn	AI448320|AW552119	Fyn proto-oncogene	protein-coding	0.000000	0.368159		-47(TCTACATATGCATA,+,0.00),-47(TCTACATATGCATA,-,0.00),-27(TCTACATATGCATA,+,0.00),-27(TCTACATATGCATA,-,0.00),-7(TCTACATATGCATA,+,0.00),-7(TCTACATATGCATA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-660	chr12	31949373	31949573	+	1.58251	NA	intron (NM_177993, intron 1 of 8)	CpG	772	NM_001361928	73389	Mm.390461	NM_153198	ENSMUSG00000002996	Hbp1	1700058O05Rik|BE629963|C330012F01Rik|C86454	high mobility group box transcription factor 1	protein-coding	0.090000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-990	chr14	65150000	65150200	+	1.58251	NA	Intergenic	CpG	-51994	NM_018788	54616	Mm.103748	NM_018788	ENSMUSG00000021978	Extl3	2900009G18Rik|AU040105|Ext1l|mKIAA0519	exostoses (multiple)-like 3	protein-coding	0.065000	0.631841			
merged_common-15	chr1	180888763	180888963	+	1.58251	NA	Intergenic	Intergenic	-4245	NM_177099	320202	Mm.87078	NM_177099	ENSMUSG00000066652	Lefty2	6030463A22Rik|Ebaf|Lefta|Leftb|lefty-2|lefty-B	left-right determination factor 2	protein-coding	0.020000	0.537313			-37(TTTTGCATCACAAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1997	chr3	121428213	121428413	+	1.58251	NA	intron (NM_028044, intron 1 of 6)	intron (NM_028044, intron 1 of 6)	1772	NM_028044	71994	Mm.275555	NM_028044	ENSMUSG00000053931	Cnn3	1600014M03Rik|C85854|Calpo3	calponin 3, acidic	protein-coding	0.040000	0.512438			53(CCTTTGCATTGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-243	chr10	5824918	5825118	+	1.58251	NA	TTS (NM_019958)	TTS (NM_019958)	-1075	NM_175374	108853	Mm.55082	NM_175374	ENSMUSG00000019774	Mtrf1l	9130004K12Rik	mitochondrial translational release factor 1-like	protein-coding	0.005000	0.437811			-21(ATTAAAAAAAGAAAGA,-,0.00),54(ATTTGCAATTCAAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-174	chr1	161070676	161070876	+	1.58251	NA	promoter-TSS (NM_172644)	promoter-TSS (NM_172644)	9	NR_131030	70454	Mm.248212	NM_027429	ENSMUSG00000026708	Cenpl	2610300B10Rik|AW121806|AW550697|CENP-L	centromere protein L	protein-coding	0.070000	0.512438			
ePOU_nocontrol_ChIP_peaks_unique-1913	chr3	65974583	65974783	+	1.58251	NA	Intergenic	CpG	-16434	NM_019937	56706	Mm.175612	NM_019937	ENSMUSG00000027829	Ccnl1	2610030E23Rik|AU018493|Ccnl|ania-6a	cyclin L1	protein-coding	0.075000	0.621891			
ePOU_nocontrol_ChIP_peaks_unique-112	chr1	93511981	93512181	+	1.58251	NA	promoter-TSS (NM_145519)	promoter-TSS (NM_145519)	-23	NM_145519	227377	Mm.243091	NM_145519	ENSMUSG00000034066	Farp2	AI465173|BC009153|D030026M03Rik|Fir|mKIAA0793	FERM, RhoGEF and pleckstrin domain protein 2	protein-coding	0.150000	0.786070			
ePOU_nocontrol_ChIP_peaks_unique-1716	chr2	79645640	79645840	+	1.58251	NA	intron (NM_080558, intron 8 of 17)	intron (NM_080558, intron 8 of 17)	10315	NM_080558	70599	Mm.272881	NM_080558	ENSMUSG00000027007	Itprid2	5730488C15Rik|CS-1|CS1|KRAP|SPAG13|Ssfa2|mKIAA1927	ITPR interacting domain containing 2	protein-coding	0.015000	0.462687	83(TATGCATAATGTAAT,+,0.00),83(TATGCATAATGTAAT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2742	chr8	66453815	66454015	+	1.58251	NA	intron (NM_175188, intron 6 of 7)	intron (NM_175188, intron 6 of 7)	32615	NM_001357208	66282	Mm.294985	NM_025465	ENSMUSG00000025591	Tma16	1810029B16Rik	translation machinery associated 16	protein-coding	0.005000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-248	chr10	8992068	8992268	+	1.58251	NA	Intergenic	Intergenic	-106098	NM_175155	70097	Mm.338275	NM_175155	ENSMUSG00000015305	Sash1	1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790	SAM and SH3 domain containing 1	protein-coding	0.000000	0.343284			3(TTTCAGTTATTCAAAT,+,0.00),62(TTTTTGTCATGTTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2213	chr5	25529718	25529918	+	1.58251	NA	promoter-TSS (NR_027388)	promoter-TSS (NR_027388)	-200	NR_027388	73571	Mm.105263	NR_027388	ENSMUSG00000101856	1700096K18Rik	-	RIKEN cDNA 1700096K18 gene	ncRNA	0.085000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-347	chr10	79984756	79984956	+	1.58251	NA	promoter-TSS (NM_001359632)	promoter-TSS (NM_001359632)	-596	NM_001003949	216157	Mm.29442	NM_001003949	ENSMUSG00000013858	Tmem259	AC087114.7gm2|ORF61|R32184_3|mFLJ00277	transmembrane protein 259	protein-coding	0.060000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-839	chr13	55329754	55329954	+	1.58251	NA	promoter-TSS (NM_016662)	promoter-TSS (NM_016662)	-123	NM_016662	17121	Mm.20350	NM_016662	ENSMUSG00000021485	Mxd3	4631412E13Rik|Mad3|bHLHc13	Max dimerization protein 3	protein-coding	0.090000	0.771144			
ePOU_nocontrol_ChIP_peaks_unique-2934	chr9	96759198	96759398	+	1.58251	NA	Intergenic	Intergenic	-6264	NR_102293	319707	Mm.392191	NR_102293	ENSMUSG00000101581	C430002N11Rik	-	RIKEN cDNA C430002N11 gene	ncRNA	0.040000	0.537313			
merged_common-129	chr19	23558642	23558842	+	1.58251	NA	TTS (NM_026188)	TTS (NM_026188)	94070	NM_026188	67483	Mm.443287	NM_026188	ENSMUSG00000033053	1700028P14Rik	AV209940	RIKEN cDNA 1700028P14 gene	protein-coding	0.005000	0.303483			35(TTTTTATTATGAAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1843	chr3	5317350	5317550	+	1.58251	NA	intron (NM_001368671, intron 3 of 10)	L1_Mus3|LINE|L1	96254	NM_001368671	80892	Mm.41522	NM_030708	ENSMUSG00000025255	Zfhx4	A930021B15|C130041O22Rik|Zfh-4|Zfh4	zinc finger homeodomain 4	protein-coding	0.005000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-2300	chr5	102976692	102976892	+	1.58251	NA	intron (NM_001310685, intron 6 of 11)	intron (NM_001310685, intron 6 of 11)	81600	NM_001310686	26414	Mm.39253	NM_009158	ENSMUSG00000046709	Mapk10	C230008H04Rik|JNK3|JNK3B1|JNK3B2|SAPK(beta)|Serk2|p493F12|p54bSAPK	mitogen-activated protein kinase 10	protein-coding	0.000000	0.333333			-51(GATTTGTATTGAAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1865	chr3	32708665	32708865	+	1.58251	NA	5' UTR (NM_019673, exon 1 of 14)	5' UTR (NM_019673, exon 1 of 14)	219	NM_019673	56456	Mm.41077	NM_019673	ENSMUSG00000027671	Actl6a	2810432C06Rik|AI851094|ARP4|Actl6|Baf53a|C79802	actin-like 6A	protein-coding	0.095000	0.631841			
merged_common-51	chr11	117969297	117969497	+	1.58251	NA	promoter-TSS (NM_007707)	promoter-TSS (NM_007707)	-31	NM_007707	12702	Mm.3468	NM_007707	ENSMUSG00000053113	Socs3	Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3	suppressor of cytokine signaling 3	protein-coding	0.130000	0.761194			
ePOU_nocontrol_ChIP_peaks_unique-921	chr14	11204256	11204456	+	1.58251	NA	Intergenic	Intergenic	-42321	NM_001360141	14198	Mm.397619	NM_010210	ENSMUSG00000060579	Fhit	AW045638|Fra14A2	fragile histidine triad gene	protein-coding	0.015000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-565	chr11	93888397	93888597	+	1.58251	NA	intron (NM_001346525, intron 2 of 17)	intron (NM_001346525, intron 2 of 17)	2326	NM_134012	103537	Mm.210334	NM_134012	ENSMUSG00000059474	Mbtd1	AA408199|AI194990|hemp	mbt domain containing 1	protein-coding	0.005000	0.402985			-32(CTCTGAATAACAAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-97	chr1	85815492	85815692	+	1.58251	NA	intron (NM_001355047, intron 2 of 9)	intron (NM_001355047, intron 2 of 9)	21575	NM_001355047	12283	Mm.26135	NM_133781	ENSMUSG00000036707	Cab39	AA408805|AA960512|C78372|MO25|MO25alpha	calcium binding protein 39	protein-coding	0.000000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-334	chr10	68137436	68137636	+	1.58251	NA	intron (NM_023598, intron 4 of 9)	intron (NM_023598, intron 4 of 9)	141190	NM_023598	71371	Mm.440357	NM_023598	ENSMUSG00000019947	Arid5b	4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta	AT rich interactive domain 5B (MRF1-like)	protein-coding	0.015000	0.477612			58(ATTTACATAACATTAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-802	chr13	23298900	23299100	+	1.58251	NA	intron (NR_126444, intron 1 of 1)	intron (NR_126444, intron 1 of 1)	14407	NR_126444	75322	Mm.108666	NR_126443	ENSMUSG00000085488	4930557F10Rik	-	RIKEN cDNA 4930557F10 gene	ncRNA	0.020000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-220	chr1	183788972	183789172	+	1.58251	NA	intron (NR_151520, intron 2 of 2)	intron (NR_151520, intron 2 of 2)	40095	NR_151520	102637191	Mm.417076	NR_151520	ENSMUSG00000103305	Gm34068	-	predicted gene, 34068	ncRNA	0.005000	0.348259			-39(ATTAACATAATAACAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1279	chr16	78860813	78861013	+	1.58251	NA	Intergenic	Intergenic	-70035	NM_139134	246048	Mm.77895	NM_139134	ENSMUSG00000022860	Chodl	3110074E07Rik|MT75|PRED12	chondrolectin	protein-coding	0.005000	0.288557	-98(CATGAATTATTCATT,+,0.00),-98(CATGAATTATTCATT,-,0.00)		53(ATTTGAATAACATAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1418	chr18	6292012	6292212	+	1.58251	NA	Intergenic	Intergenic	-50588	NM_008448	16573	Mm.223744	NM_008448	ENSMUSG00000006740	Kif5b	AL022807|Khc|Khcs|Kns1|Ukhc	kinesin family member 5B	protein-coding	0.005000	0.402985			68(ATTTGCAACTGAAAAG,-,0.00)
merged_common-85	chr13	104816908	104817108	+	1.58251	NA	promoter-TSS (NM_026072)	promoter-TSS (NM_026072)	-55	NM_001360094	67285	Mm.235398	NM_026072	ENSMUSG00000021715	Cwc27	3110009E13Rik|NY-CO-10|Sdccag10	CWC27 spliceosome-associated protein	protein-coding	0.060000	0.542289			
ePOU_nocontrol_ChIP_peaks_unique-1375	chr17	63434362	63434562	+	1.58251	NA	intron (NM_015794, intron 4 of 8)	intron (NM_015794, intron 4 of 8)	66118	NM_015794	50758	Mm.136366	NM_015794	ENSMUSG00000023965	Fbxl17	6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13	F-box and leucine-rich repeat protein 17	protein-coding	0.020000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-1390	chr17	80207322	80207522	+	1.58251	NA	promoter-TSS (NM_001195487)	promoter-TSS (NM_001195487)	-117	NR_036615	225027	Mm.292016	NM_146083	ENSMUSG00000024097	Srsf7	35kDa|9430065L19Rik|9G8|NX-96|Sfrs7	serine/arginine-rich splicing factor 7	protein-coding	0.105000	0.597015			
ePOU_nocontrol_ChIP_peaks_unique-54	chr1	52758222	52758422	+	1.58251	NA	Intergenic	Intergenic	-30964	NM_001357464	98682	Mm.491173	NM_133829	ENSMUSG00000041439	Mfsd6	2210010L05Rik|9630025I22Rik|AI836200|AW212394|MMR2	major facilitator superfamily domain containing 6	protein-coding	0.005000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-2737	chr8	62396113	62396313	+	1.58251	NA	Intergenic	L1MC5|LINE|L1	-273020	NM_001136089	26359	Mm.42179	NM_011922	ENSMUSG00000031635	Anxa10	-	annexin A10	protein-coding	0.000000	0.323383		53(AATGCATAATCAAG,-,0.00)	-73(ATATTGCTATGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1847	chr3	9159142	9159342	+	1.58251	NA	Intergenic	Intergenic	-91325	NM_177660	229055	Mm.103262	NM_177660	ENSMUSG00000069114	Zbtb10	4832414A18|AU021107|RINZF	zinc finger and BTB domain containing 10	protein-coding	0.035000	0.557214			
merged_common-72	chr13	21871538	21871738	+	1.58251	NA	Intergenic	Intergenic	25411	NR_035500	100316716		NR_035500	ENSMUSG00000088148	Mir1983	mmu-mir-1983	microRNA 1983	ncRNA	0.000000	0.333333			47(ATTTTATCTTGCAAAT,+,0.00)
merged_common-177	chr4	84670145	84670345	+	1.58251	NA	intron (NM_001369083, intron 1 of 6)	intron (NM_001369083, intron 1 of 6)	5158	NM_001369083	242509	Mm.190774	NM_172870	ENSMUSG00000028487	Bnc2	5031434M05Rik|8430420F16Rik	basonuclin 2	protein-coding	0.005000	0.298507		27(TATGCATATTCATG,+,0.00),27(TATGCATATTCATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2391	chr6	16834512	16834712	+	1.58251	NA	intron (NM_031198, intron 6 of 6)	intron (NM_031198, intron 6 of 6)	57088	NR_157239	102640655		NR_157239	ENSMUSG00000107022	Gm36669	-	predicted gene, 36669	ncRNA	0.000000	0.343284			
merged_common-4	chr1	57406580	57406780	+	1.58251	NA	promoter-TSS (NM_001037742)	promoter-TSS (NM_001037742)	-6	NM_001302964	68736	Mm.288490	NM_001037742	ENSMUSG00000048495	Tyw5	1110034B05Rik	tRNA-yW synthesizing protein 5	protein-coding	0.080000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-1233	chr16	37116911	37117111	+	1.58251	NA	intron (NM_172440, intron 26 of 27)	intron (NM_172440, intron 26 of 27)	105225	NM_001159369	77782	Mm.259114	NM_029977	ENSMUSG00000034206	Polq	A430110D14Rik	polymerase (DNA directed), theta	protein-coding	0.005000	0.303483			
ePOU_nocontrol_ChIP_peaks_unique-262	chr10	18446071	18446271	+	1.58251	NA	intron (NM_173390, intron 1 of 6)	intron (NM_173390, intron 1 of 6)	-23810	NM_001163592	215819	Mm.297971	NM_173390	ENSMUSG00000039835	Nhsl1	5730409E15Rik|A630035H13Rik|A730096F01|BC013565|D10Bwg0940e|mKIAA1357	NHS-like 1	protein-coding	0.005000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-2532	chr6	139387746	139387946	+	1.58251	NA	Intergenic	Intergenic	-65270	NR_045149	70962	Mm.410833	NR_045149	ENSMUSG00000108128	4922502N22Rik	-	RIKEN cDNA 4922502N22 gene	ncRNA	0.005000	0.253731	3(AATACATAATTCATA,+,0.00),3(AATACATAATTCATA,-,0.00)		42(TTTTCCATAAGAAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2075	chr4	43656520	43656720	+	1.58251	NA	promoter-TSS (NM_026871)	promoter-TSS (NM_026871)	-175	NM_026871	68917	Mm.25285	NM_026871	ENSMUSG00000028470	Hint2	1190005L05Rik	histidine triad nucleotide binding protein 2	protein-coding	0.040000	0.512438			
ePOU_nocontrol_ChIP_peaks_unique-1037	chr14	114011693	114011893	+	1.58251	NA	Intergenic	Intergenic	-820172	NR_045661	75822	Mm.410813	NR_045661	ENSMUSG00000115320	4930524C18Rik	-	RIKEN cDNA 4930524C18 gene	ncRNA	0.000000	0.253731			
ePOU_nocontrol_ChIP_peaks_unique-361	chr10	86705651	86705851	+	1.58251	NA	promoter-TSS (NM_011631)	promoter-TSS (NM_011631)	-60	NM_001003939	103220	Mm.440762	NM_153595	ENSMUSG00000044937	Ttc41	AI449705|AU041509|Gnn	tetratricopeptide repeat domain 41	protein-coding	0.065000	0.597015			
ePOU_nocontrol_ChIP_peaks_unique-1143	chr15	82146952	82147152	+	1.58251	NA	promoter-TSS (NM_033218)	promoter-TSS (NM_033218)	-217	NM_033218	20788	Mm.38016	NM_033218	ENSMUSG00000022463	Srebf2	AI608257|SREBP-2|SREBP2|SREBP2gc|bHLHd2|lop13|nuc	sterol regulatory element binding factor 2	protein-coding	0.085000	0.611940			
ePOU_nocontrol_ChIP_peaks_unique-2184	chr4	151996265	151996465	+	1.58251	NA	promoter-TSS (NM_172705)	promoter-TSS (NM_172705)	-186	NM_172705	230936	Mm.25582	NM_172705	ENSMUSG00000047777	Phf13	BC029632|Phf5|SPOC1	PHD finger protein 13	protein-coding	0.090000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-2276	chr5	76588778	76588978	+	1.58251	NA	5' UTR (NM_199032, exon 1 of 26)	5' UTR (NM_199032, exon 1 of 26)	179	NM_199032	381644	Mm.332452	NM_199032	ENSMUSG00000036403	Cep135	BC062951|Cep4|Gm1044	centrosomal protein 135	protein-coding	0.150000	0.756219			
ePOU_nocontrol_ChIP_peaks_unique-2600	chr7	70239388	70239588	+	1.58251	NA	intron (NR_131145, intron 1 of 3)	RLTR13B1|LTR|ERVK	98334	NR_131145	624549	Mm.116344	NR_131144	ENSMUSG00000109097	Gm29683	Gm44536	predicted gene, 29683	ncRNA	0.015000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-1378	chr17	67235479	67235679	+	1.58251	NA	intron (NM_008984, intron 1 of 30)	intron (NM_008984, intron 1 of 30)	118880	NM_008984	19274	Mm.311809	NM_008984	ENSMUSG00000033278	Ptprm	RPTPmu|mKIAA4044	protein tyrosine phosphatase, receptor type, M	protein-coding	0.005000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-1540	chr19	14598067	14598267	+	1.58251	NA	promoter-TSS (NM_011600)	promoter-TSS (NM_011600)	16	NM_011600	21888	Mm.103638	NM_011600	ENSMUSG00000024642	Tle4	5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333|grg-4	transducin-like enhancer of split 4	protein-coding	0.090000	0.611940		-63(GATACATATTCACG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-768	chr12	110971081	110971281	+	1.58251	NA	3' UTR (NM_001289510, exon 20 of 20)	3' UTR (NM_001289510, exon 20 of 20)	7437	NM_001361917	74251	Mm.250989	NM_175207	ENSMUSG00000037904	Ankrd9	2500003O20Rik	ankyrin repeat domain 9	protein-coding	0.015000	0.562189			
ePOU_nocontrol_ChIP_peaks_unique-620	chr11	117949757	117949957	+	1.58251	NA	Intergenic	CpG	19509	NM_007707	12702	Mm.3468	NM_007707	ENSMUSG00000053113	Socs3	Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3	suppressor of cytokine signaling 3	protein-coding	0.090000	0.701493			
ePOU_nocontrol_ChIP_peaks_unique-1946	chr3	86395054	86395254	+	1.58251	NA	intron (NM_030695, intron 34 of 56)	intron (NM_030695, intron 34 of 56)	153129	NM_011839	23937	Mm.389466	NM_011839	ENSMUSG00000057777	Mab21l2	-	mab-21-like 2	protein-coding	0.000000	0.398010			-1(CTGTTGTGATGTTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1311	chr17	10531635	10531835	+	1.58251	NA	intron (NM_027032, intron 4 of 4)	intron (NM_027032, intron 4 of 4)	75519	NR_077237	319750	Mm.383485	NR_077237	ENSMUSG00000089633	A230009B12Rik	-	RIKEN cDNA A230009B12 gene	ncRNA	0.010000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-1736	chr2	103439832	103440032	+	1.58251	NA	intron (NM_001145813, intron 3 of 6)	intron (NM_001145813, intron 3 of 6)	15864	NM_010125	13711	Mm.20888	NM_010125	ENSMUSG00000027186	Elf5	ESE-2|ESE-5|ESE-5.	E74-like factor 5	protein-coding	0.040000	0.542289			
ePOU_nocontrol_ChIP_peaks_unique-1435	chr18	24603626	24603826	+	1.58251	NA	promoter-TSS (NM_001360909)	promoter-TSS (NM_001360909)	91	NM_139143	106957	Mm.21688	NM_139143	ENSMUSG00000024270	Slc39a6	Ermelin|Zip6	solute carrier family 39 (metal ion transporter), member 6	protein-coding	0.100000	0.676617			
Oct4_nocontrol_ChIP_peaks_unique-74	chr5	3468264	3468464	+	1.58251	NA	intron (NM_009873, intron 4 of 7)	intron (NM_009873, intron 4 of 7)	-75469	NM_001042501	68152	Mm.240265	NM_026583	ENSMUSG00000058503	Fam133b	2900022K02Rik|5830415L20Rik	family with sequence similarity 133, member B	protein-coding	0.005000	0.363184			39(TTTTACATAACAGAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-484	chr11	53212398	53212598	+	1.58251	NA	Intergenic	RSINE1|SINE|B4	87981	NM_008300	15525	Mm.239865	NM_008300	ENSMUSG00000020361	Hspa4	70kDa|AI317151|APG-2|Hsp110|Hsp70RY|mKIAA4025	heat shock protein 4	protein-coding	0.010000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-2859	chr9	35223471	35223671	+	1.58251	NA	intron (NM_194257, intron 5 of 7)	intron (NM_194257, intron 5 of 7)	12368	NM_026130	67398	Mm.284688	NM_026130	ENSMUSG00000032042	Srpr	1300011P19Rik|D11Mgi27|Srpra	signal recognition particle receptor ('docking protein')	protein-coding	0.010000	0.422886			
merged_common-11	chr1	152903176	152903376	+	1.58251	NA	promoter-TSS (NM_001005507)	promoter-TSS (NM_001005507)	-630	NM_001160256	226517	Mm.270775	NM_001005507	ENSMUSG00000042772	Smg7	9430023P16Rik|mKIAA0250	Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)	protein-coding	0.080000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-13	chr1	16241142	16241342	+	1.58251	NA	intron (NM_001111272, intron 11 of 12)	intron (NM_001111272, intron 11 of 12)	135360	NM_133832	98711	Mm.274376	NM_133832	ENSMUSG00000025921	Rdh10	3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp	retinol dehydrogenase 10 (all-trans)	protein-coding	0.000000	0.427861			
merged_common-235	chr9	58748384	58748584	+	1.58251	NA	Intergenic	Intergenic	-6925	NM_028598	73673	Mm.205196	NM_028598	ENSMUSG00000074269	Rec114	2410076I21Rik|4930527A11Rik	REC114 meiotic recombination protein	protein-coding	0.010000	0.442786			
Oct4_nocontrol_ChIP_peaks_unique-81	chr6	81384230	81384430	+	1.58251	NA	Intergenic	L1M4|LINE|L1	511333	NR_106091	102465711		NR_106091	ENSMUSG00000106154	Mir7232	mmu-mir-7232	microRNA 7232	ncRNA	0.000000	0.388060			-65(CTCTAAATAACAATGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1659	chr2	33616447	33616647	+	1.57398	NA	intron (NM_010725, intron 2 of 7)	intron (NM_010725, intron 2 of 7)	24551	NM_010725	16917	Mm.39825	NM_010725	ENSMUSG00000038765	Lmx1b	Icst|LMX1.1|LMX1.2	LIM homeobox transcription factor 1 beta	protein-coding	0.045000	0.532338	-19(CATGTATAATGCATG,+,0.00),-19(CATGTATAATGCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-622	chr11	117976142	117976342	+	1.55635	NA	Intergenic	Intergenic	-6876	NM_007707	12702	Mm.3468	NM_007707	ENSMUSG00000053113	Socs3	Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3	suppressor of cytokine signaling 3	protein-coding	0.030000	0.651741			
merged_common-42	chr11	63952726	63952926	+	1.50418	NA	Intergenic	Intergenic	-11400	NR_131111	78883	Mm.410764	NR_131111	ENSMUSG00000086359	9630013K17Rik	-	RIKEN cDNA 9630013K17 gene	ncRNA	0.005000	0.437811			52(ATTAGCATTACAATGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2740	chr8	64307962	64308162	+	1.50418	NA	Intergenic	Intergenic	-102054	NM_009390	21892	Mm.418367	NM_009390	ENSMUSG00000053626	Tll1	Tll|Tll-1|b2b2476Clo	tolloid-like	protein-coding	0.000000	0.323383			
merged_common-197	chr5	93267277	93267477	+	1.50418	NA	promoter-TSS (NM_007635)	promoter-TSS (NM_007635)	-196	NM_007635	12452	Mm.3527	NM_007635	ENSMUSG00000029385	Ccng2	-	cyclin G2	protein-coding	0.040000	0.552239			
merged_common-60	chr12	33938203	33938403	+	1.50418	NA	Intergenic	Intergenic	9878	NM_033522	114712	Mm.204643	NM_033522	ENSMUSG00000046518	Ferd3l	Mnato3|N-twist|Nato|Nato3|Ntwist|Ptfb|bHLHa31|fer3	Fer3 like bHLH transcription factor	protein-coding	0.015000	0.378109	18(AATGTATTATGCATA,+,0.00),18(AATGTATTATGCATA,-,0.00)	25(TATGCATATGCAAA,+,0.00),25(TATGCATATGCAAA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1230	chr16	35588136	35588336	+	1.50418	NA	intron (NM_013661, intron 1 of 21)	intron (NM_013661, intron 1 of 21)	46874	NM_013661	20357	Mm.42015	NM_013661	ENSMUSG00000052133	Sema5b	AI893641|SemG|Semag|mKIAA1445	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B	protein-coding	0.055000	0.497512			-68(CCATTCTCATGGAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1572	chr19	37469272	37469472	+	1.50418	NA	intron (NR_131008, intron 1 of 1)	L2b|LINE|L2	4118	NR_131008	78640	Mm.234265	NR_131008	ENSMUSG00000117800	1700122C19Rik	-	RIKEN cDNA 1700122C19 gene	ncRNA	0.005000	0.402985		20(ACTGCATATGCATT,+,0.00),20(ACTGCATATGCATT,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1421	chr18	10392169	10392369	+	1.50418	NA	intron (NM_001083628, intron 1 of 32)	intron (NM_001083628, intron 1 of 32)	67090	NM_001083628	381157	Mm.261535	NM_001083628	ENSMUSG00000042942	Greb1l	mKIAA4095	growth regulation by estrogen in breast cancer-like	protein-coding	0.000000	0.402985			32(CCATTATTATGCAGAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2649	chr7	112883648	112883848	+	1.50418	NA	intron (NM_001166584, intron 11 of 13)	intron (NM_001166584, intron 11 of 13)	-70214	NM_175279	78748	Mm.349943	NM_175279	ENSMUSG00000098132	Rassf10	4632411J06Rik	Ras association (RalGDS/AF-6) domain family (N-terminal) member 10	protein-coding	0.005000	0.472637			-17(TTATTCTTATTTAAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2696	chr8	15329870	15330070	+	1.50418	NA	Intergenic	Intergenic	272317	NM_008664	17930	Mm.272115	NM_008664	ENSMUSG00000031461	Myom2	AW146149	myomesin 2	protein-coding	0.005000	0.333333			10(TCTTTGCCTTGTAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1912	chr3	65951142	65951342	+	1.50418	NA	intron (NM_001355433, intron 5 of 11)	intron (NM_001355433, intron 5 of 11)	7007	NM_001355432	56706	Mm.175612	NM_019937	ENSMUSG00000027829	Ccnl1	2610030E23Rik|AU018493|Ccnl|ania-6a	cyclin L1	protein-coding	0.005000	0.328358			16(TCATTTTCATGTAAAG,+,0.00),57(ATTTTAAAAACAAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-230	chr1	191030283	191030483	+	1.50418	NA	TTS (NR_027298)	TTS (NR_027298)	-4193	NM_001081259	226844	Mm.134053	NM_198025	ENSMUSG00000066595	Flvcr1	9630055N22Rik|FLVCR|Mfsd7b	feline leukemia virus subgroup C cellular receptor 1	protein-coding	0.025000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-1810	chr2	154371973	154372173	+	1.50418	NA	intron (NM_025876, intron 1 of 13)	intron (NM_025876, intron 1 of 13)	646	NM_025876	66971	Mm.289427	NM_025876	ENSMUSG00000027487	Cdk5rap1	2310066P17Rik	CDK5 regulatory subunit associated protein 1	protein-coding	0.005000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-2416	chr6	37605497	37605697	+	1.50418	NA	Intergenic	Intergenic	75424	NM_145364	208665	Mm.262635	NM_145364	ENSMUSG00000038641	Akr1d1	-	aldo-keto reductase family 1, member D1	protein-coding	0.000000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-2126	chr4	98923350	98923550	+	1.50418	NA	promoter-TSS (NM_001301414)	promoter-TSS (NM_001301414)	-360	NM_001301414	230484	Mm.371692	NM_146144	ENSMUSG00000028560	Usp1	-	ubiquitin specific peptidase 1	protein-coding	0.030000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-975	chr14	59600149	59600349	+	1.50418	NA	Intergenic	RLTR22_Mur|LTR|ERVK	-2290	NM_001168535	71891	Mm.439850	NM_027986	ENSMUSG00000021982	Cdadc1	2310010M10Rik|AI449174|AI463398|BB130816|NYD-SP15	cytidine and dCMP deaminase domain containing 1	protein-coding	0.005000	0.323383		-6(CATGCATACTCATA,+,0.00),82(CTTACATATGCATA,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2763	chr8	78235466	78235666	+	1.50418	NA	intron (NM_183096, intron 5 of 13)	intron (NM_183096, intron 5 of 13)	22224	NM_183096	73301	Mm.61243	NM_183096	ENSMUSG00000037101	Ttc29	1700031F13Rik	tetratricopeptide repeat domain 29	protein-coding	0.025000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-1413	chr17	90584851	90585051	+	1.50418	NA	intron (NM_001346957, intron 12 of 18)	intron (NM_001346957, intron 12 of 18)	-129071	NM_001346961	18189	Mm.478418	NM_020252	ENSMUSG00000024109	Nrxn1	1700062G21Rik|9330127H16Rik|A230068P09Rik|mKIAA0578	neurexin I	protein-coding	0.015000	0.427861			24(AATTACAAGATAAAAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2094	chr4	59599468	59599668	+	1.50418	NA	intron (NM_024255, intron 6 of 10)	intron (NM_024255, intron 6 of 10)	18005	NM_001301367	72479	Mm.272905	NM_024255	ENSMUSG00000028383	Hsdl2	2610207I16Rik	hydroxysteroid dehydrogenase like 2	protein-coding	0.005000	0.383085			-11(TCTTTGTGATGCACAG,+,0.00)
merged_common-5	chr1	64576708	64576908	+	1.50418	NA	intron (NM_001037726, intron 6 of 6)	B3|SINE|B2	40956	NM_025964	67099	Mm.46394	NM_025964	ENSMUSG00000025956	Mettl21a	2310038H17Rik|AI464204|Fam119a	methyltransferase like 21A	protein-coding	0.000000	0.353234	-23(CATGTTTTATGCATA,+,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2110	chr4	86183953	86184153	+	1.50418	NA	intron (NM_029967, intron 4 of 27)	intron (NM_029967, intron 4 of 27)	130078	NM_001368621	77739	Mm.331690	NM_029967	ENSMUSG00000066113	Adamtsl1	5930437A14Rik|6720426B09Rik|ADAMTSL-1	ADAMTS-like 1	protein-coding	0.005000	0.402985			-72(GTCTGCATGGGAAAAA,-,0.00)
merged_common-101	chr15	78947687	78947887	+	1.50418	NA	promoter-TSS (NM_138579)	promoter-TSS (NM_138579)	63	NM_138579	110253	Mm.123714	NM_138579	ENSMUSG00000033088	Triobp	AI428493|EST478828|Tara|mKIAA1662	TRIO and F-actin binding protein	protein-coding	0.070000	0.651741			
merged_common-233	chr8	124284497	124284697	+	1.50418	NA	intron (NM_139272, intron 1 of 15)	intron (NM_139272, intron 1 of 15)	53203	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	polypeptide N-acetylgalactosaminyltransferase 2	protein-coding	0.025000	0.547264			
merged_common-212	chr6	133963414	133963614	+	1.50418	NA	Intergenic	Intergenic	-72186	NM_007961	14011	Mm.269995	NM_007961	ENSMUSG00000030199	Etv6	AW123102|AW557856|Tel	ets variant 6	protein-coding	0.005000	0.462687			-12(TCATTGTCATGCTTAT,+,0.00)
merged_common-139	chr2	35373161	35373361	+	1.49238	NA	Intergenic	B3|SINE|B2	-5532	NM_029463	75859	Mm.159604	NM_029463	ENSMUSG00000026882	4930568D16Rik	Ggta1l1	RIKEN cDNA 4930568D16 gene	protein-coding	0.010000	0.398010		-22(AATACATATACATA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-255	chr10	12931863	12932063	+	1.44861	NA	Intergenic	Intergenic	-8836	NR_038027	320273	Mm.417706	NR_038027	ENSMUSG00000097378	B230208H11Rik	-	RIKEN cDNA B230208H11 gene	ncRNA	0.025000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-2341	chr5	124923016	124923216	+	1.44861	NA	Intergenic	Intergenic	60411	NM_001081750	269704	Mm.138617	NM_001081750	ENSMUSG00000079215	Zfp664	AW060232|D930038J03Rik|ZFOC1|Znf664	zinc finger protein 664	protein-coding	0.035000	0.522388			81(CCATTAGTATGTAAAT,+,0.00)
merged_common-205	chr6	37572210	37572410	+	1.44861	NA	Intergenic	RLTR22_Mur|LTR|ERVK	42137	NM_145364	208665	Mm.262635	NM_145364	ENSMUSG00000038641	Akr1d1	-	aldo-keto reductase family 1, member D1	protein-coding	0.000000	0.343284		-62(CATTCATATGCAAA,+,0.00),41(CTTACATATGCATA,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2564	chr7	28962384	28962584	+	1.44861	NA	promoter-TSS (NM_021895)	promoter-TSS (NM_021895)	-152	NM_001360550	60595	Mm.81144	NM_021895	ENSMUSG00000054808	Actn4	C77391	actinin alpha 4	protein-coding	0.095000	0.616915	5(CATGAATGATTCATA,+,0.00),5(CATGAATGATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1266	chr16	70230752	70230952	+	1.44861	NA	Intergenic	Intergenic	-83097	NM_028803	74185	Mm.396102	NM_028803	ENSMUSG00000022707	Gbe1	2310045H19Rik|2810426P10Rik|D16Ertd536e	glucan (1,4-alpha-), branching enzyme 1	protein-coding	0.000000	0.313433			
merged_common-54	chr12	3238383	3238583	+	1.40550	NA	intron (NR_015551, intron 4 of 6)	intron (NR_015551, intron 4 of 6)	2692	NR_015551	74173	Mm.309774	NM_028796	ENSMUSG00000079179	Rab10os	1700012B15Rik|1810036A22Rik	RAB10, member RAS oncogene family, opposite strand	ncRNA	0.005000	0.417910		-99(CATGAATTTGCATA,+,0.00),-99(CATGAATTTGCATA,-,0.00),-19(CATAAATTTGCATA,+,0.00),67(CATAAATTTGCATA,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1315	chr17	15832614	15832814	+	1.40550	NA	Intergenic	Intergenic	-6128	NM_178615	68799	Mm.293466	NM_178615	ENSMUSG00000048027	Rgmb	1110059F19Rik|DRAGON	repulsive guidance molecule family member B	protein-coding	0.015000	0.373134			9(CAATTGTTATGCAAAT,+,0.00)
merged_common-211	chr6	125008732	125008932	+	1.36965	NA	promoter-TSS (NM_001252083)	promoter-TSS (NM_001252083)	-406	NM_001252083	269800	Mm.108677	NM_175557	ENSMUSG00000038346	Zfp384	BB163993|C130073D16Rik|Ciz|NP|Nmp4	zinc finger protein 384	protein-coding	0.055000	0.537313	-57(GATGCATAATTCATG,+,0.00),-57(GATGCATAATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-226	chr1	185748640	185748840	+	1.34563	NA	intron (NR_030555, intron 4 of 6)	L1MC3|LINE|L1	211404	NR_030555	100124483		NR_030555	ENSMUSG00000076976	Mir297c	Mirn297c	microRNA 297c	ncRNA	0.005000	0.358209			4(ATTTACATAGCTATGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2990	chrX	97353227	97353427	+	1.34563	NA	intron (NM_001161433, intron 3 of 6)	intron (NM_001161433, intron 3 of 6)	23882	NM_175540	245527	Mm.189270	NM_175540	ENSMUSG00000034457	Eda2r	9430060M22Rik|TNFRSF27|Xedar	ectodysplasin A2 receptor	protein-coding	0.000000	0.228856	4(TATGCATTATTCATT,+,0.00),4(TATGCATTATTCATT,-,0.00)		-83(ATTTGAAAAGTAAAAA,-,0.00),72(CAATTGTAATGGAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1293	chr16	94526382	94526582	+	1.34563	NA	5' UTR (NM_007834, exon 1 of 8)	5' UTR (NM_007834, exon 1 of 8)	147	NM_007834	13185	Mm.7472	NM_007834	ENSMUSG00000022898	Vps26c	AW538125|Dcra|Dscr3	VPS26 endosomal protein sorting factor C	protein-coding	0.100000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-2870	chr9	48472518	48472718	+	1.34563	NA	intron (NM_024233, intron 5 of 6)	intron (NM_024233, intron 5 of 6)	7993	NM_001357501	104444	Mm.21911	NM_024233	ENSMUSG00000032026	Rexo2	1810038D15Rik|AW107347|Rex2|Sfn|Smfn	RNA exonuclease 2	protein-coding	0.030000	0.517413			
ePOU_nocontrol_ChIP_peaks_unique-878	chr13	94037635	94037835	+	1.34563	NA	Intergenic	Intergenic	-20061	NM_172589	218454	Mm.316553	NM_172589	ENSMUSG00000045312	Lhfpl2	6030465B15|AI447312|AW050335|mKIAA0206|vgim	lipoma HMGIC fusion partner-like 2	protein-coding	0.005000	0.333333		-42(AATGAATCTGCATA,+,0.00)	-37(ATCTGCATAACACTGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1280	chr16	81223837	81224037	+	1.34563	NA	intron (NM_001113208, intron 1 of 17)	intron (NM_001113208, intron 1 of 17)	23240	NM_001113208	17968	Mm.433941	NM_010954	ENSMUSG00000022762	Ncam2	Ncam-2|Ocam|RNCAM	neural cell adhesion molecule 2	protein-coding	0.005000	0.422886			13(TCTTTGTGATGTAAAA,+,0.00)
merged_common-43	chr11	69202438	69202638	+	1.34563	NA	Intergenic	RLTR11D|LTR|ERVK	-4695	NM_009661	11688	Mm.289672	NM_009661	ENSMUSG00000020891	Alox8	15-LOX-2|15-LOX-B|8-LOX|8S-LOX|Alox15b	arachidonate 8-lipoxygenase	protein-coding	0.010000	0.402985	-13(AATAAATAATTCATA,+,0.00),-13(AATAAATAATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1848	chr3	9678492	9678692	+	1.34563	NA	Intergenic	RLTR13D5|LTR|ERVK	-68507	NM_133218	170753	Mm.212908	NM_133218	ENSMUSG00000040209	Zfp704	C030026M03|C030034L19Rik|Gig1|Znf704	zinc finger protein 704	protein-coding	0.005000	0.422886	-35(CATGAATAATGCATA,+,0.00),-35(CATGAATAATGCATA,-,0.00),7(AATGAATAATGCAAC,+,0.00),7(AATGAATAATGCAAC,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2270	chr5	73290033	73290233	+	1.34563	NA	Intergenic	Intergenic	-2661	NM_001159888	68095	Mm.247039	NM_023429	ENSMUSG00000029152	Ociad1	6030432N09Rik|AI481327|AW557942|Asrij|B230209J16Rik|BB021357|Emi2|Imi2|OCIA|TPA018	OCIA domain containing 1	protein-coding	0.005000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-2132	chr4	103068307	103068507	+	1.34563	NA	intron (NM_146254, intron 8 of 16)	intron (NM_146254, intron 8 of 16)	-41136	NM_001290648	23919	Mm.100163	NM_011831	ENSMUSG00000066090	Insl5	RIF2	insulin-like 5	protein-coding	0.000000	0.412935			37(ATTTACATGAGAATCC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1862	chr3	29741617	29741817	+	1.34563	NA	Intergenic	Intergenic	104973	NR_105796	102466637		NR_105796	ENSMUSG00000098315	Mir21b	Gm27951|mmu-mir-21b	microRNA 21b	ncRNA	0.000000	0.358209		61(GATGATTATGCATT,+,0.00),61(GATGATTATGCATT,-,0.00)	
merged_common-137	chr2	28533313	28533513	+	1.34563	NA	promoter-TSS (NM_001145836)	promoter-TSS (NM_001145836)	-51	NM_001145836	19730	Mm.5236	NM_009058	ENSMUSG00000026821	Ralgds	Gnds|Rgds|mKIAA1308	ral guanine nucleotide dissociation stimulator	protein-coding	0.085000	0.716418			
merged_common-36	chr11	20332913	20333113	+	1.34563	NA	promoter-TSS (NM_018861)	promoter-TSS (NM_018861)	-300	NM_018861	55963	Mm.6379	NM_018861	ENSMUSG00000020142	Slc1a4	ASCT-1|ASCT1|AW045657|SATT	solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	protein-coding	0.065000	0.671642			
merged_common-173	chr4	49601381	49601581	+	1.34563	NA	Intergenic	RLTR12A|LTR|ERVK	-3605	NM_025944	67063	Mm.454013	NM_025944	ENSMUSG00000039611	Tmem246	2810432L12Rik|9330170P15Rik|AI835809	transmembrane protein 246	protein-coding	0.005000	0.323383			-23(ATTTGAATAACAGGAG,-,0.00),57(GCTTTCTTTTTAAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2151	chr4	123101175	123101375	+	1.34563	NA	Intergenic	RLTR13B3|LTR|ERVK	-3886	NM_007559	12164	Mm.439764	NM_007559	ENSMUSG00000002384	Bmp8b	Op3	bone morphogenetic protein 8b	protein-coding	0.010000	0.407960	-10(CATGAATAATGCAAT,+,0.00),-10(CATGAATAATGCAAT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-576	chr11	97703142	97703342	+	1.34563	NA	promoter-TSS (NM_011971)	promoter-TSS (NM_011971)	-192	NM_011971	26446	Mm.21874	NM_011971	ENSMUSG00000069744	Psmb3	AL033320|C10-II	proteasome (prosome, macropain) subunit, beta type 3	protein-coding	0.055000	0.557214			
ePOU_nocontrol_ChIP_peaks_unique-2467	chr6	83125048	83125248	+	1.34563	NA	promoter-TSS (NM_023547)	promoter-TSS (NM_023547)	-29	NM_023547	70020	Mm.27814	NM_023547	ENSMUSG00000030034	Ino80b	2510009I23Rik|HMG1YL4|Hmga1l4|Papa1|Znhit4	INO80 complex subunit B	protein-coding	0.070000	0.562189			
ePOU_nocontrol_ChIP_peaks_unique-1575	chr19	38015568	38015768	+	1.34563	NA	intron (NM_001099634, intron 3 of 52)	intron (NM_001099634, intron 3 of 52)	27909	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding	0.000000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-2602	chr7	72513989	72514189	+	1.34563	NA	Intergenic	Intergenic	-207494	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding	0.000000	0.278607			
merged_common-98	chr15	53659424	53659624	+	1.34563	NA	intron (NM_177225, intron 3 of 4)	intron (NM_177225, intron 3 of 4)	-45245	NR_039538	100628567		NR_039538	ENSMUSG00000104794	Mir28c	mmu-mir-28c	microRNA 28c	ncRNA	0.010000	0.398010			57(ATCTACATTATAATAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1880	chr3	46687850	46688050	+	1.34563	NA	Intergenic	RLTR13B3|LTR|ERVK	212832	NR_105800	102465199		NR_105800	ENSMUSG00000098417	Mir6379	Gm27730|mmu-mir-6379	microRNA 6379	ncRNA	0.010000	0.398010	48(ATTGCATTATTCATG,+,0.00),48(ATTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1918	chr3	68252371	68252571	+	1.34563	NA	intron (NM_001113420, intron 1 of 6)	intron (NM_001113420, intron 1 of 6)	187669	NM_001113421	30953	Mm.331064	NM_013928	ENSMUSG00000027777	Schip1	Nf2ip|Schip-1	schwannomin interacting protein 1	protein-coding	0.000000	0.417910			45(ATTTGCATTACAGATG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-461	chr11	38136643	38136843	+	1.34563	NA	Intergenic	LTR85c|LTR|Gypsy?	383302	NR_040295	100502917	Mm.61144	NR_040295		Gm12130	-	predicted gene 12130	ncRNA	0.000000	0.412935			4(CTTTGCATAATAATGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1251	chr16	50008738	50008938	+	1.34563	NA	Intergenic	Intergenic	28378	NR_045001	628951	Mm.428032	NR_045001		Gm6936	-	predicted gene 6936	ncRNA	0.000000	0.378109			
merged_common-115	chr17	3597733	3597933	+	1.34563	NA	Intergenic	Intergenic	40009	NR_045303	68230	Mm.431352	NR_045302	ENSMUSG00000116852	1700102H20Rik	-	RIKEN cDNA 1700102H20 gene	ncRNA	0.000000	0.363184			-51(GTTTTGTTATGTTAAG,+,0.00)
merged_common-204	chr5	149184344	149184544	+	1.34563	NA	promoter-TSS (NM_001286824)	promoter-TSS (NM_001286824)	-116	NM_001115151	231915	Mm.29402	NM_001013378	ENSMUSG00000041264	Uspl1	E430026A01Rik	ubiquitin specific peptidase like 1	protein-coding	0.070000	0.716418			
ePOU_nocontrol_ChIP_peaks_unique-1735	chr2	103406902	103407102	+	1.34563	NA	Intergenic	Intergenic	-5096	NM_001145813	13711	Mm.20888	NM_010125	ENSMUSG00000027186	Elf5	ESE-2|ESE-5|ESE-5.	E74-like factor 5	protein-coding	0.015000	0.492537			
ePOU_nocontrol_ChIP_peaks_unique-2461	chr6	72439576	72439776	+	1.34563	NA	promoter-TSS (NM_001363799)	promoter-TSS (NM_001363799)	-120	NM_145569	232087	Mm.29815	NM_145569	ENSMUSG00000053907	Mat2a	D630045P18Rik|MAT 2	methionine adenosyltransferase II, alpha	protein-coding	0.120000	0.701493			
merged_common-151	chr2	152796179	152796379	+	1.34563	NA	intron (NM_001289716, intron 2 of 2)	Lx9|LINE|L1	32210	NR_149254	12048	Mm.238213	NM_009743	ENSMUSG00000007659	Bcl2l1	Bcl(X)L|Bcl-XL|Bcl2l|BclX|bcl-x|bcl2-L-1	BCL2-like 1	protein-coding	0.000000	0.313433			-74(ATATTGTTATGTATAC,+,0.00),-49(ATATGTATAACAATAA,-,0.00),-34(ATTTAAAAAAAAAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-607	chr11	110124425	110124625	+	1.34563	NA	intron (NM_147220, intron 25 of 38)	RLTR22_Mur|LTR|ERVK	-28588	NM_153145	217258	Mm.344148	NM_153145	ENSMUSG00000041828	Abca8a	-	ATP-binding cassette, sub-family A (ABC1), member 8a	protein-coding	0.005000	0.328358		-98(TATGCATATGTAAG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1224	chr16	33401367	33401567	+	1.34563	NA	intron (NM_001358569, intron 1 of 8)	intron (NM_001358569, intron 1 of 8)	1022	NM_001358569	22661	Mm.392667	NM_011749	ENSMUSG00000022811	Zfp148	2210405J08Rik|AI480666|AW045217|BERF-1|BFCOL1|ZBP-89|Znf148	zinc finger protein 148	protein-coding	0.005000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-1306	chr17	6146530	6146730	+	1.34563	NA	intron (NM_054040, intron 1 of 13)	L1MA4|LINE|L1	8482	NM_054040	68842	Mm.449307	NM_054040	ENSMUSG00000034377	Tulp4	1110057P05Rik|2210038L17Rik|Tusp	tubby like protein 4	protein-coding	0.005000	0.323383			9(ATTTGCAGGAAAATGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2773	chr8	85843479	85843679	+	1.34563	NA	intron (NM_199446, intron 2 of 31)	L1_Mur3|LINE|L1	2591	NM_199446	102093	Mm.237296	NM_199446	ENSMUSG00000036879	Phkb	AI463271	phosphorylase kinase beta	protein-coding	0.005000	0.358209			56(TTTTTGTCATTCATAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1724	chr2	91963416	91963616	+	1.34563	NA	promoter-TSS (NM_138306)	promoter-TSS (NM_138306)	47	NM_138306	104418	Mm.314923	NM_138306	ENSMUSG00000040479	Dgkz	E130307B02Rik|F730209L11Rik|mDGK[z]	diacylglycerol kinase zeta	protein-coding	0.165000	0.835821			
merged_common-44	chr11	72576542	72576742	+	1.34563	NA	Intergenic	Intergenic	-26396	NM_029932	77577	Mm.46185	NM_029932	ENSMUSG00000020798	Spns3	9830002I17Rik	spinster homolog 3	protein-coding	0.040000	0.542289			58(TCTTTATCATTCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2867	chr9	46272938	46273138	+	1.34563	NA	promoter-TSS (NM_011752)	promoter-TSS (NM_011752)	-26	NM_011752	22687	Mm.17519	NM_011752	ENSMUSG00000032078	Zpr1	AI303781|Zfp259|Znf259	ZPR1 zinc finger	protein-coding	0.030000	0.532338			
ePOU_nocontrol_ChIP_peaks_unique-1673	chr2	45687654	45687854	+	1.34563	NA	Intergenic	Lx7|LINE|L1	-8851	NR_040497	69405	Mm.396184	NR_040497	ENSMUSG00000086202	1700019E08Rik	-	RIKEN cDNA 1700019E08 gene	ncRNA	0.000000	0.318408			-74(ATTTGCATTGTAAATG,-,0.00)
merged_common-84	chr13	104518773	104518973	+	1.34563	NA	Intergenic	Intergenic	231038	NM_001081020	108154	Mm.208125	NM_175496	ENSMUSG00000046169	Adamts6	A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	protein-coding	0.010000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-1574	chr19	37714372	37714572	+	1.34563	NA	Intergenic	Intergenic	16664	NM_007811	13082	Mm.42230	NM_007811	ENSMUSG00000024987	Cyp26a1	Cyp26|P450RA|P450RAI|RAH	cytochrome P450, family 26, subfamily a, polypeptide 1	protein-coding	0.010000	0.358209			20(ATTTGAATTGCAAATC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1898	chr3	56356209	56356409	+	1.34563	NA	Intergenic	Intergenic	-172608	NM_030595	26422	Mm.384353	NM_030595	ENSMUSG00000027799	Nbea	Lyst2|mKIAA1544	neurobeachin	protein-coding	0.010000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-294	chr10	38981995	38982195	+	1.34563	NA	intron (NM_010681, intron 1 of 37)	intron (NM_010681, intron 1 of 37)	16580	NM_010681	16775	Mm.258065	NM_010681	ENSMUSG00000019846	Lama4	-	laminin, alpha 4	protein-coding	0.005000	0.368159			
merged_common-168	chr4	12663232	12663432	+	1.34563	NA	Intergenic	Intergenic	-243505	NM_173746	208820	Mm.12057	NM_173746	ENSMUSG00000055963	Triqk	C130086A10|Gm11818	triple QxxK/R motif containing	protein-coding	0.010000	0.368159			-38(CCATTTATATGCTAAT,+,0.00),7(ATTTACATGTTAATTA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2090	chr4	57956352	57956552	+	1.34563	NA	promoter-TSS (NM_011660)	promoter-TSS (NM_011660)	-41	NM_011660	22166	Mm.260618	NM_011660	ENSMUSG00000028367	Txn1	ADF|AW550880|Trx1|Txn	thioredoxin 1	protein-coding	0.110000	0.731343			
ePOU_nocontrol_ChIP_peaks_unique-370	chr10	93162555	93162755	+	1.34563	NA	promoter-TSS (NR_035452)	promoter-TSS (NR_035452)	-130	NR_035452	100316689		NR_035452	ENSMUSG00000089214	Mir1931	mir-1931|mmu-mir-1931	microRNA 1931	ncRNA	0.010000	0.313433			
merged_common-80	chr13	94490802	94491002	+	1.34222	NA	intron (NM_009680, intron 20 of 26)	intron (NM_009680, intron 20 of 26)	131942	NM_009680	11774	Mm.21185	NM_009680	ENSMUSG00000021686	Ap3b1	AP-3|AU015684|C78395|Hps2|beta3A|pe|pearl|rim2	adaptor-related protein complex 3, beta 1 subunit	protein-coding	0.015000	0.432836	-15(CATGAATTATGCATT,+,0.00),-15(CATGAATTATGCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1411	chr17	88637364	88637564	+	1.33709	NA	intron (NM_029858, intron 2 of 3)	L1_Mur3|LINE|L1	10909	NM_029858	77057	Mm.482203	NM_029858	ENSMUSG00000033855	Ston1	4921524J06Rik|C86231|Salf|Sblf	stonin 1	protein-coding	0.010000	0.283582			64(ATATCCATAACAAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-728	chr12	80844226	80844426	+	1.33709	NA	intron (NM_178682, intron 2 of 5)	intron (NM_178682, intron 2 of 5)	53794	NM_178682	217684	Mm.341776	NM_178682	ENSMUSG00000021133	Susd6	4933426M11Rik|mKIAA0247	sushi domain containing 6	protein-coding	0.000000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-2693	chr8	12151876	12152076	+	1.33709	NA	Intergenic	Intergenic	-233795	NR_027975	434280	Mm.447484	NM_001013812	ENSMUSG00000047935	Sox1ot	EG434280|Gm5607	Sox1 overlapping transcript	ncRNA	0.010000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-2807	chr8	118409631	118409831	+	1.33709	NA	intron (NM_019707, intron 1 of 13)	intron (NM_019707, intron 1 of 13)	126120	NM_019707	12554	Mm.334841	NM_019707	ENSMUSG00000031841	Cdh13	4932416G01Rik|Cdht|Tcad	cadherin 13	protein-coding	0.015000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-1032	chr14	105560944	105561144	+	1.33709	NA	Intergenic	Intergenic	-28505	NR_102319	380930	Mm.427836	NR_102319	ENSMUSG00000115149	9330188P03Rik	Gm1589|mgt-6	RIKEN cDNA 9330188P03 gene	ncRNA	0.030000	0.383085	30(AATGAATTATTCATG,+,0.00),30(AATGAATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1313	chr17	15527163	15527363	+	1.33709	NA	promoter-TSS (NM_008799)	promoter-TSS (NM_008799)	38	NM_008799	18567	Mm.323	NM_008799	ENSMUSG00000014771	Pdcd2	AI528543|Pcd2|RP-8	programmed cell death 2	protein-coding	0.090000	0.706468			
ePOU_nocontrol_ChIP_peaks_unique-2832	chr9	13817672	13817872	+	1.33709	NA	intron (NR_037622, intron 4 of 10)	intron (NR_037622, intron 4 of 10)	9281	NR_037622	74360	Mm.157212	NM_026665	ENSMUSG00000031922	Cep57	3110002L15Rik|4921510P06Rik|4931428M20Rik|AI467480|Tsp57|mKIAA0092	centrosomal protein 57	protein-coding	0.000000	0.313433			-63(ATGTCCATGACAATGG,-,0.00),-17(CTTTGCATAGTAAAGT,-,0.00)
merged_common-13	chr1	177641771	177641971	+	1.33709	NA	non-coding (NR_037994, exon 3 of 3)	non-coding (NR_037994, exon 3 of 3)	1072	NR_037994	75589	Mm.86666	NR_037994	ENSMUSG00000101746	2310043L19Rik	-	RIKEN cDNA 2310043L19 gene	ncRNA	0.010000	0.432836			43(ATTAACATCATAATGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2250	chr5	57840874	57841074	+	1.33709	NA	intron (NM_001310608, intron 1 of 3)	intron (NM_001310608, intron 1 of 3)	122893	NM_001310606	54216	Mm.332387	NM_018764	ENSMUSG00000029108	Pcdh7	-	protocadherin 7	protein-coding	0.005000	0.358209			2(ATATCCATCAGAAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-723	chr12	79433931	79434131	+	1.33709	NA	intron (NM_009014, intron 7 of 10)	intron (NM_009014, intron 7 of 10)	136680	NM_001252562	19363	Mm.341756	NM_009014	ENSMUSG00000059060	Rad51b	AI553500|R51H2|Rad51l1|mREC2	RAD51 paralog B	protein-coding	0.010000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-2430	chr6	48554836	48555036	+	1.33709	NA	5' UTR (NM_177736, exon 1 of 3)	5' UTR (NM_177736, exon 1 of 3)	137	NM_001110160	243371	Mm.290764	NM_177736	ENSMUSG00000073096	Lrrc61	BC027309	leucine rich repeat containing 61	protein-coding	0.055000	0.567164			
ePOU_nocontrol_ChIP_peaks_unique-2727	chr8	48739435	48739635	+	1.33709	NA	Intergenic	Intergenic	-64845	NM_001145937	23965	Mm.42191	NM_011857	ENSMUSG00000031561	Tenm3	2610100B16Rik|Odz1|Odz3|Ten-m3|mKIAA1455	teneurin transmembrane protein 3	protein-coding	0.010000	0.308458			-24(ATTTTAATGAAAAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2357	chr5	137629155	137629355	+	1.33709	NA	exon (NM_001168652, exon 1 of 18)	exon (NM_001168652, exon 1 of 18)	132	NR_033148	100316903	Mm.200763	NR_033148		Gm20605	Lrch4-sap25	predicted gene 20605	ncRNA	0.075000	0.691542			
Oct4_nocontrol_ChIP_peaks_unique-5	chr1	133227021	133227221	+	1.33709	NA	Intergenic	Intergenic	-18976	NM_182930	240753	Mm.253559	NM_182930	ENSMUSG00000041757	Plekha6	9530028L01Rik|AU042621|Pepp3	pleckstrin homology domain containing, family A member 6	protein-coding	0.030000	0.557214			
ePOU_nocontrol_ChIP_peaks_unique-1192	chr16	15637382	15637582	+	1.33709	NA	promoter-TSS (NM_011159)	promoter-TSS (NM_011159)	-82	NM_008565	17217	Mm.1500	NM_008565	ENSMUSG00000022673	Mcm4	19G|AI325074|AU045576|Cdc21|Mcmd4|mKIAA4003|mcdc21	minichromosome maintenance complex component 4	protein-coding	0.090000	0.606965			
ePOU_nocontrol_ChIP_peaks_unique-1489	chr18	69052108	69052308	+	1.33709	NA	Intergenic	Intergenic	-29935	NR_105780	102465187		NR_105780	ENSMUSG00000098366	Mir145b	Gm27644|mmu-mir-145b	microRNA 145b	ncRNA	0.000000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-932	chr14	20707489	20707689	+	1.33709	NA	promoter-TSS (NM_027996)	promoter-TSS (NM_027996)	37	NM_001252082	268721	Mm.275082	NM_027996	ENSMUSG00000021819	Zswim8	2310021P13Rik|4832404P21Rik|Kiaa0913|mKIAA0913	zinc finger SWIM-type containing 8	protein-coding	0.120000	0.726368			
ePOU_nocontrol_ChIP_peaks_unique-2625	chr7	94271635	94271835	+	1.33709	NA	Intergenic	RLTR17B_Mm|LTR|ERVK	-1087559	NM_001358087	100040298	Mm.260904	NM_001358087		Gm15501	EyeLinc5	predicted pseudogene 15501	protein-coding	0.000000	0.268657		-3(TATGAATATGTATA,+,0.00),-3(TATGAATATGTATA,-,0.00),24(TATGAATATGCATT,+,0.00),24(TATGAATATGCATT,-,0.00)	33(GCATTCATATTCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1405	chr17	86106418	86106618	+	1.33709	NA	intron (NM_030133, intron 11 of 20)	ORR1A3-int|LTR|ERVL-MaLR	38657	NM_030133	78586	Mm.146236	NM_030133	ENSMUSG00000024135	Srbd1	AI461933|C85414|D530025C17Rik	S1 RNA binding domain 1	protein-coding	0.005000	0.308458		30(CAGGCATATTCATG,+,0.00),30(CAGGCATATTCATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1181	chr16	6914716	6914916	+	1.33709	NA	intron (NM_001359725, intron 5 of 16)	intron (NM_001359725, intron 5 of 16)	-124554	NM_001359729	268859	Mm.370334	NM_021477	ENSMUSG00000008658	Rbfox1	A2bp|A2bp1|Hrnbp1|fox-1	RNA binding protein, fox-1 homolog (C. elegans) 1	protein-coding	0.005000	0.343284	-88(ACTCCATAATGCATA,+,0.00),-33(CATGAATAATTCATG,+,0.00),-33(CATGAATAATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1139	chr15	79075165	79075365	+	1.33709	NA	promoter-TSS (NM_145139)	promoter-TSS (NM_145139)	42	NM_145139	223691	Mm.206404	NM_145139	ENSMUSG00000033047	Eif3l	0610011H21Rik|D15N1e|Eif3eip|Eif3ip|Eif3s6ip|HSP-66Y|PAF67	eukaryotic translation initiation factor 3, subunit L	protein-coding	0.105000	0.671642			
ePOU_nocontrol_ChIP_peaks_unique-1273	chr16	74733539	74733739	+	1.33709	NA	intron (NM_001358491, intron 1 of 27)	intron (NM_001358491, intron 1 of 27)	-321814	NM_175549	268902	Mm.171736	NM_175549	ENSMUSG00000052516	Robo2	2600013A04Rik|9430089E08Rik|BB097918|D230004I22Rik|mKIAA1568	roundabout guidance receptor 2	protein-coding	0.005000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-2318	chr5	110417075	110417275	+	1.33709	NA	intron (NM_001142642, intron 3 of 18)	intron (NM_001142642, intron 3 of 18)	-30048	NM_028596	381668	Mm.348782	NM_028596	ENSMUSG00000043323	Fbrsl1	2410025L10Rik|AI467568|Gm1049|Gm29766|mKIAA1545	fibrosin-like 1	protein-coding	0.010000	0.487562			-81(ATTTAAATGATAATGA,-,0.00)
merged_common-76	chr13	44018845	44019045	+	1.33709	NA	Intergenic	Intergenic	-102222	NR_045285	328235	Mm.188356	NR_045285	ENSMUSG00000089815	Gm5083	A730030A06	predicted gene 5083	ncRNA	0.005000	0.447761			43(CCTTTGTCATGGTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1189	chr16	12885876	12886076	+	1.33709	NA	Intergenic	Intergenic	74586	NR_040507	75493	Mm.396146	NR_040507	ENSMUSG00000101565	1700003L19Rik	-	RIKEN cDNA 1700003L19 gene	ncRNA	0.015000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-2629	chr7	98186742	98186942	+	1.33709	NA	Intergenic	L1MB7|LINE|L1	-8568	NM_007602	12337	Mm.326847	NM_007602	ENSMUSG00000035547	Capn5	nCL-3	calpain 5	protein-coding	0.015000	0.427861			
merged_common-232	chr8	121462979	121463179	+	1.33709	NA	Intergenic	(CATA)n|Simple_repeat|Simple_repeat	78875	NM_001357259	76405	Mm.165697	NM_029597	ENSMUSG00000031809	1700018B08Rik	1700084O22Rik	RIKEN cDNA 1700018B08 gene	protein-coding	0.005000	0.298507			
ePOU_nocontrol_ChIP_peaks_unique-2385	chr6	7844607	7844807	+	1.33709	NA	promoter-TSS (NM_052993)	promoter-TSS (NM_052993)	-517	NM_052993	94192	Mm.102752	NM_052993	ENSMUSG00000042460	C1galt1	2210410E06Rik|AV284120|T-synthase	core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1	protein-coding	0.130000	0.781095			
ePOU_nocontrol_ChIP_peaks_unique-685	chr12	52232103	52232303	+	1.33709	NA	intron (NM_029760, intron 6 of 10)	RLTR13B1|LTR|ERVK	134457	NM_029760	76826	Mm.244781	NM_029760	ENSMUSG00000035142	Nubpl	2410170E07Rik	nucleotide binding protein-like	protein-coding	0.000000	0.393035	-28(CATGAATAATGCAAT,+,0.00),-28(CATGAATAATGCAAT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1340	chr17	29008178	29008378	+	1.33709	NA	promoter-TSS (NM_001357173)	promoter-TSS (NM_001357173)	-283	NM_001357173	106504	Mm.439986	NM_134115	ENSMUSG00000024006	Stk38	5830476G13Rik|9530097A09Rik|AA617404|Ndr1	serine/threonine kinase 38	protein-coding	0.040000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-1919	chr3	68543037	68543237	+	1.33709	NA	intron (NM_001282044, intron 2 of 7)	intron (NM_001282044, intron 2 of 7)	-29231	NM_013928	30953	Mm.331064	NM_013928	ENSMUSG00000027777	Schip1	Nf2ip|Schip-1	schwannomin interacting protein 1	protein-coding	0.010000	0.492537			
ePOU_nocontrol_ChIP_peaks_unique-81	chr1	71646068	71646268	+	1.33709	NA	intron (NM_001276411, intron 5 of 43)	intron (NM_001276411, intron 5 of 43)	7066	NM_001276412	14268	Mm.193099	NM_010233	ENSMUSG00000026193	Fn1	E330027I09|Fn|Fn-1	fibronectin 1	protein-coding	0.015000	0.442786			-27(CACTTGTTATGTAAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1022	chr14	98019124	98019324	+	1.33709	NA	intron (NM_001038610, intron 1 of 10)	intron (NM_001038610, intron 1 of 10)	150541	NM_001038610	13134	Mm.320593	NM_007826	ENSMUSG00000055639	Dach1	Dac|Dach	dachshund family transcription factor 1	protein-coding	0.015000	0.373134	-33(GATGCATAATTCATA,+,0.00),-33(GATGCATAATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1398	chr17	84957218	84957418	+	1.33709	NA	promoter-TSS (NM_001159496)	promoter-TSS (NM_001159496)	105	NR_027929	68531	Mm.249695	NR_027929	ENSMUSG00000097047	1110020A21Rik	2600015P10Rik	RIKEN cDNA 1110020A21 gene	ncRNA	0.045000	0.562189			
ePOU_nocontrol_ChIP_peaks_unique-2940	chr9	106821921	106822121	+	1.33709	NA	promoter-TSS (NM_001015507)	promoter-TSS (NM_001015507)	45	NM_001015507	321006	Mm.440089	NM_001015507	ENSMUSG00000040325	Dcaf1	AI447437|B930007L02Rik|Vprbp|mKIAA0800	DDB1 and CUL4 associated factor 1	protein-coding	0.085000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-2569	chr7	34630258	34630458	+	1.33709	NA	Intergenic	Intergenic	22574	NM_146188	233107	Mm.76761	NM_146188	ENSMUSG00000030499	Kctd15	BC031749	potassium channel tetramerisation domain containing 15	protein-coding	0.030000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-2582	chr7	45800495	45800695	+	1.33709	NA	intron (NM_001005511, intron 14 of 15)	intron (NM_001005511, intron 14 of 15)	13721	NM_001112701	19158	Mm.272130	NM_011181	ENSMUSG00000003269	Cyth2	ARNO|CLM2|Pscd2	cytohesin 2	protein-coding	0.045000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-57	chr1	55406061	55406261	+	1.33709	NA	5' UTR (NM_001114663, exon 1 of 6)	5' UTR (NM_001114663, exon 1 of 6)	215	NM_001114663	227120	Mm.194183	NM_001114663	ENSMUSG00000038349	Plcl1	C230017K02Rik|PLC-L|PLC-L1|PLCE|PLCL|PLDL1|PRIP|PRIP-1	phospholipase C-like 1	protein-coding	0.100000	0.671642			
merged_common-154	chr2	157566435	157566635	+	1.33709	NA	promoter-TSS (NM_016916)	promoter-TSS (NM_016916)	-174	NM_001355426	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein	protein-coding	0.040000	0.482587		66(CATGCATATGCAGC,+,0.00),66(CATGCATATGCAGC,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-350	chr10	80329830	80330030	+	1.33709	NA	promoter-TSS (NM_008793)	promoter-TSS (NM_008793)	-215	NM_001204931	70335	Mm.28147	NM_139292	ENSMUSG00000035504	Reep6	0610011M24Rik|Dp1l1	receptor accessory protein 6	protein-coding	0.075000	0.651741			
ePOU_nocontrol_ChIP_peaks_unique-2957	chr9	116457662	116457862	+	1.33709	NA	Intergenic	Intergenic	268582	NR_152204	100043817	Mm.404276	NR_152204		Gm4668	-	predicted gene 4668	ncRNA	0.000000	0.383085			14(TATTTGCATTGCAAAT,+,0.00),15(ATTTGCATTGCAAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2209	chr5	24046272	24046472	+	1.33709	NA	Intergenic	Intergenic	-15682	NM_053090	84652	Mm.304976	NM_053090	ENSMUSG00000028995	Fam126a	AB030242|Drctnnb1a	family with sequence similarity 126, member A	protein-coding	0.005000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-1314	chr17	15787214	15787414	+	1.33709	NA	Intergenic	Charlie2b|DNA|hAT-Charlie	39272	NM_178615	68799	Mm.293466	NM_178615	ENSMUSG00000048027	Rgmb	1110059F19Rik|DRAGON	repulsive guidance molecule family member B	protein-coding	0.005000	0.283582			
Oct4_nocontrol_ChIP_peaks_unique-35	chr15	17780576	17780776	+	1.33709	NA	Intergenic	Intergenic	588951	NR_045711	70886	Mm.399021	NR_045711	ENSMUSG00000098150	4921515E04Rik	-	RIKEN cDNA 4921515E04 gene	ncRNA	0.005000	0.378109			
merged_common-92	chr14	86511179	86511379	+	1.33709	NA	Intergenic	Intergenic	265309	NR_040457	75155	Mm.399239	NR_040457	ENSMUSG00000115271	4930529K09Rik	4930507G21Rik	RIKEN cDNA 4930529K09 gene	ncRNA	0.005000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-364	chr10	89778081	89778281	+	1.33709	NA	intron (NM_029166, intron 4 of 20)	RMER12|LTR|ERVK	33190	NM_029166	75089	Mm.268922	NM_029166	ENSMUSG00000019951	Uhrf1bp1l	2010319N22Rik|4930506D01Rik|AA589495|C80672|E030041M21Rik|mKIAA0701	UHRF1 (ICBP90) binding protein 1-like	protein-coding	0.005000	0.323383			
ePOU_nocontrol_ChIP_peaks_unique-2076	chr4	44167612	44167812	+	1.33709	NA	promoter-TSS (NM_175201)	promoter-TSS (NM_175201)	-174	NM_175201	73469	Mm.262859	NM_175201	ENSMUSG00000035696	Rnf38	1700065B19Rik|2610202O07Rik|AA673263|Oip1	ring finger protein 38	protein-coding	0.130000	0.746269			
ePOU_nocontrol_ChIP_peaks_unique-933	chr14	21507516	21507716	+	1.33709	NA	intron (NM_017479, intron 1 of 16)	intron (NM_017479, intron 1 of 16)	7831	NM_017479	54169	Mm.248967	NM_017479	ENSMUSG00000021767	Kat6b	AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf	K(lysine) acetyltransferase 6B	protein-coding	0.000000	0.293532			-31(TCATTTTCATGGTGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-526	chr11	73899197	73899397	+	1.33709	NA	Intergenic	Intergenic	8193	NM_147005	259007	Mm.425696	NM_147005	ENSMUSG00000062186	Olfr395	MOR135-10	olfactory receptor 395	protein-coding	0.000000	0.313433			45(ATTTACATAATAATTC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2135	chr4	107196561	107196761	+	1.33709	NA	intron (NM_029565, intron 6 of 7)	RMER4A|LTR|ERVK	-12483	NM_001081272	546840	Mm.331755	NM_001081272	ENSMUSG00000070877	Ldlrad1	-	low density lipoprotein receptor class A domain containing 1	protein-coding	0.005000	0.427861			
Oct4_nocontrol_ChIP_peaks_unique-58	chr2	115310324	115310524	+	1.33709	NA	Intergenic	Intergenic	33856	NR_040516	78193	Mm.189508	NR_040516	ENSMUSG00000087309	4930528P14Rik	-	RIKEN cDNA 4930528P14 gene	ncRNA	0.000000	0.417910			-50(GCATTGTCATTCATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1329	chr17	26138452	26138652	+	1.33709	NA	promoter-TSS (NM_009733)	promoter-TSS (NM_009733)	-134	NM_009733	12005	Mm.23684	NM_009733	ENSMUSG00000024182	Axin1	AI316800|Axin|Fu|Kb|Ki|fused|kinky|knobbly	axin 1	protein-coding	0.075000	0.616915			
ePOU_nocontrol_ChIP_peaks_unique-1662	chr2	34327530	34327730	+	1.33709	NA	intron (NM_001290576, intron 2 of 7)	intron (NM_001290576, intron 2 of 7)	44415	NM_001290576	18516	Mm.239941	NM_016768	ENSMUSG00000038718	Pbx3	-	pre B cell leukemia homeobox 3	protein-coding	0.000000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-375	chr10	98942398	98942598	+	1.33709	NA	intron (NM_001359507, intron 1 of 21)	intron (NM_001359507, intron 1 of 21)	27346	NM_001359507	67972	Mm.166944	NM_026482	ENSMUSG00000019943	Atp2b1	2810442I22Rik|E130111D10Rik|Pmca1	ATPase, Ca++ transporting, plasma membrane 1	protein-coding	0.015000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-1619	chr2	5714755	5714955	+	1.33709	NA	promoter-TSS (NM_177343)	promoter-TSS (NM_177343)	-93	NM_001290374	227541	Mm.191949	NM_177343	ENSMUSG00000039145	Camk1d	A630059D12Rik|CKLiK|CaMKIdelta|E030025C11Rik|mCKLiK	calcium/calmodulin-dependent protein kinase ID	protein-coding	0.095000	0.696517			
ePOU_nocontrol_ChIP_peaks_unique-191	chr1	171038636	171038836	+	1.33709	NA	Intergenic	Intergenic	19810	NM_144559	246256	Mm.251254	NM_144559	ENSMUSG00000059089	Fcgr4	4833442P21Rik|CD16-2|FcgRIV|FcgammaRIV|Fcgr3a|Fcrl3	Fc receptor, IgG, low affinity IV	protein-coding	0.030000	0.348259	-11(ATTGAATAATTCATA,+,0.00),-11(ATTGAATAATTCATA,-,0.00)		29(ATTAAAAAAATAAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-267	chr10	21045228	21045428	+	1.33709	NA	intron (NM_001358561, intron 18 of 22)	intron (NM_001358561, intron 18 of 22)	4508	NM_001177776	52906	Mm.253280	NM_026203	ENSMUSG00000019986	Ahi1	1700015F03Rik|Ahi-1|D10Bwg0629e	Abelson helper integration site 1	protein-coding	0.000000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-736	chr12	84487958	84488158	+	1.33709	NA	intron (NM_173756, intron 5 of 5)	intron (NM_173756, intron 5 of 5)	36550	NM_173756	217708	Mm.311904	NM_173756	ENSMUSG00000085793	Lin52	5830457H20Rik	lin-52 homolog (C. elegans)	protein-coding	0.005000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-753	chr12	99485057	99485257	+	1.33709	NA	Intergenic	Intergenic	-35083	NM_183186	71375	Mm.341972	NM_183186	ENSMUSG00000033713	Foxn3	5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1	forkhead box N3	protein-coding	0.010000	0.378109			71(ATCTAAATAACAATGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2997	chrX	142872154	142872354	+	1.33709	NA	intron (NM_019496, intron 3 of 5)	intron (NM_019496, intron 3 of 5)	94472	NM_019496	56068	Mm.143724	NM_019496	ENSMUSG00000042225	Ammecr1	6230420G18Rik	Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1	protein-coding	0.000000	0.318408			
ePOU_nocontrol_ChIP_peaks_unique-359	chr10	85917016	85917216	+	1.33709	NA	promoter-TSS (NM_001302887)	promoter-TSS (NM_001302887)	-130	NM_001302886	72843	Mm.25307	NM_181650	ENSMUSG00000035529	Prdm4	1700031E19Rik|2810470D21Rik|AW552272|SC-1|SC1	PR domain containing 4	protein-coding	0.095000	0.661692			
ePOU_nocontrol_ChIP_peaks_unique-851	chr13	71507804	71508004	+	1.33709	NA	Intergenic	Intergenic	400815	NR_130325	100316804		NR_130325	ENSMUSG00000080580	Mir466f-4	Mirn466f-4|mmu-mir-466f-4	microRNA 466f-4	ncRNA	0.015000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-1972	chr3	104220501	104220701	+	1.33709	NA	promoter-TSS (NM_133853)	promoter-TSS (NM_133853)	-195	NM_001159354	99470	Mm.264849	NM_133853	ENSMUSG00000052539	Magi3	4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634	membrane associated guanylate kinase, WW and PDZ domain containing 3	protein-coding	0.040000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-1680	chr2	51831482	51831682	+	1.33709	NA	Intergenic	Intergenic	-99573	NR_040639	433426	Mm.244381	NR_040639	ENSMUSG00000085014	Gm13490	-	predicted gene 13490	ncRNA	0.020000	0.383085			18(GCATTATCATGTATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-156	chr1	149044616	149044816	+	1.33709	NA	Intergenic	ORR1C2|LTR|ERVL-MaLR	877723	NM_001305632	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2-alpha|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding	0.000000	0.323383			-100(TTTTACATAATAAAAC,-,0.00),45(ATTTAAAAAAGAAAGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2645	chr7	112011469	112011669	+	1.33709	NA	Intergenic	Intergenic	-11937	NM_133758	74996	Mm.16974	NM_133758	ENSMUSG00000059263	Usp47	4930502N04Rik|A630020C16Rik	ubiquitin specific peptidase 47	protein-coding	0.000000	0.323383			79(TTATTATTATTCTAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2575	chr7	43330504	43330704	+	1.33709	NA	Intergenic	RLTR22_Mus|LTR|ERVK	-17304	NM_001357811	69930	Mm.45367	NM_027264	ENSMUSG00000012640	Zfp715	2610041B18Rik|mszf15	zinc finger protein 715	protein-coding	0.010000	0.313433			
merged_common-37	chr11	32694028	32694228	+	1.33709	NA	intron (NM_001363353, intron 3 of 13)	intron (NM_001363353, intron 3 of 13)	51573	NM_001271349	103583	Mm.28017	NM_134015	ENSMUSG00000020271	Fbxw11	2310065A07Rik|AA536858|BTRC2|BTRCP2|Fbxw1b|HOS	F-box and WD-40 domain protein 11	protein-coding	0.020000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-511	chr11	67151384	67151584	+	1.33709	NA	Intergenic	Intergenic	-19543	NM_001039545	17882	Mm.422801	NM_144961	ENSMUSG00000033196	Myh2	MHC2A|MyHC-IIa|Myh2a|Myhs-f|Myhs-f1|Myhsf1	myosin, heavy polypeptide 2, skeletal muscle, adult	protein-coding	0.000000	0.328358		-70(TATGCATATGCATA,+,0.00),-70(TATGCATATGCATA,-,0.00),-37(TATGTATATGCATA,+,0.00),-37(TATGTATATGCATA,-,0.00),-31(TATGCATATGCATA,+,0.00),-31(TATGCATATGCATA,-,0.00)	-44(ACAGTGTTATGTATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2838	chr9	18721986	18722186	+	1.33709	NA	Intergenic	Intergenic	33547	NM_146606	18322	Mm.246530	NM_146606	ENSMUSG00000054141	Olfr24	MOR132-1|MTPCR51	olfactory receptor 24	protein-coding	0.020000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-1595	chr19	49964564	49964764	+	1.33709	NA	Intergenic	Intergenic	713982	NM_001360457	58178	Mm.313672	NM_021377	ENSMUSG00000043531	Sorcs1	Sorcs|mSorCS	sortilin-related VPS10 domain containing receptor 1	protein-coding	0.000000	0.323383			
ePOU_nocontrol_ChIP_peaks_unique-1300	chr17	3114936	3115136	+	1.33709	NA	promoter-TSS (NM_134123)	promoter-TSS (NM_134123)	64	NM_134123	106583	Mm.124373	NM_134123	ENSMUSG00000046201	Scaf8	A630086M08Rik|A930036P18Rik|AA408306|AI447644|AI448652|AU015035|Rbm16|mKIAA1116	SR-related CTD-associated factor 8	protein-coding	0.100000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-2732	chr8	56329105	56329305	+	1.33709	NA	Intergenic	Intergenic	34653	NM_008278	15446	Mm.18832	NM_008278	ENSMUSG00000031613	Hpgd	15-PGDH|AV026552	hydroxyprostaglandin dehydrogenase 15 (NAD)	protein-coding	0.000000	0.303483		-41(ATTGCATATTTATT,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-374	chr10	97288848	97289048	+	1.33709	NA	Intergenic	Intergenic	-134530	NR_039547	100628616		NR_039547	ENSMUSG00000105557	Mir3966	mmu-mir-3966|mu-mir-3966	microRNA 3966	ncRNA	0.000000	0.283582			-67(TCTTTCTGTTGTTGAT,+,0.00),21(AAATTGTTTTTCATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2212	chr5	25499543	25499743	+	1.33709	NA	promoter-TSS (NM_001081383)	promoter-TSS (NM_001081383)	-154	NR_030700	320965	Mm.32025	NR_030700		4831440E17Rik	-	RIKEN cDNA 4831440E17 gene	ncRNA	0.145000	0.776119			
ePOU_nocontrol_ChIP_peaks_unique-2666	chr7	128247294	128247494	+	1.33709	NA	intron (NM_001289553, intron 1 of 9)	intron (NM_001289553, intron 1 of 9)	582	NM_001289552	21804	Mm.3248	NM_009365	ENSMUSG00000030782	Tgfb1i1	ARA55|Hic5|TSC-5|hic-5	transforming growth factor beta 1 induced transcript 1	protein-coding	0.010000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-2056	chr4	14871202	14871402	+	1.33709	NA	intron (NM_028264, intron 1 of 6)	intron (NM_028264, intron 1 of 6)	7083	NM_028264	72519	Mm.279158	NM_028264	ENSMUSG00000028221	Pip4p2	2610319K07Rik|AI315591|AV001360|Tmem55a	phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2	protein-coding	0.010000	0.393035			-72(ATATGAATAACAACAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-922	chr14	11716944	11717144	+	1.33709	NA	intron (NM_008981, intron 1 of 29)	intron (NM_008981, intron 1 of 29)	163491	NM_008981	19270	Mm.431266	NM_008981	ENSMUSG00000021745	Ptprg	5430405N12Rik|AW046354|AW549872|RPTPgamma	protein tyrosine phosphatase, receptor type, G	protein-coding	0.015000	0.333333		37(CATGCATTTGCATA,+,0.00),37(CATGCATTTGCATA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1784	chr2	133363238	133363438	+	1.33709	NA	Intergenic	Intergenic	-188821	NM_007553	12156	Mm.103205	NM_007553	ENSMUSG00000027358	Bmp2	AI467020|Bmp2a	bone morphogenetic protein 2	protein-coding	0.005000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-2304	chr5	104471162	104471362	+	1.33709	NA	intron (NM_008861, intron 2 of 14)	intron (NM_008861, intron 2 of 14)	11805	NM_008861	18764	Mm.6442	NM_008861	ENSMUSG00000034462	Pkd2	C030034P18Rik|PC2|TRPP2	polycystin 2, transient receptor potential cation channel	protein-coding	0.015000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-2079	chr4	46650170	46650370	+	1.33709	NA	promoter-TSS (NM_198664)	promoter-TSS (NM_198664)	-71	NM_198664	381605	Mm.331595	NM_198664	ENSMUSG00000039813	Tbc1d2	A630005A06Rik|BC022630|Gm1037|PARIS-1|PARIS1	TBC1 domain family, member 2	protein-coding	0.115000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-1588	chr19	46044909	46045109	+	1.33709	NA	5' UTR (NM_001113408, exon 1 of 11)	5' UTR (NM_001113408, exon 1 of 11)	302	NM_001113408	16825	Mm.327442	NM_010697	ENSMUSG00000025223	Ldb1	CLIM2|NLI	LIM domain binding 1	protein-coding	0.130000	0.781095			
ePOU_nocontrol_ChIP_peaks_unique-2371	chr5	142929140	142929340	+	1.33709	NA	Intergenic	CpG	-22486	NM_007393	11461	Mm.328431	NM_007393	ENSMUSG00000029580	Actb	Actx|E430023M04Rik|beta-actin	actin, beta	protein-coding	0.125000	0.661692			
merged_common-217	chr7	45434369	45434569	+	1.33709	NA	promoter-TSS (NM_030678)	promoter-TSS (NM_030678)	-5	NM_011304	20174	Mm.34410	NM_011304	ENSMUSG00000003868	Ruvbl2	mp47|p47	RuvB-like protein 2	protein-coding	0.050000	0.557214			
ePOU_nocontrol_ChIP_peaks_unique-1253	chr16	50302832	50303032	+	1.33709	NA	intron (NM_027444, intron 3 of 16)	intron (NM_027444, intron 3 of 16)	129457	NM_027444	70508	Mm.28940	NM_027444	ENSMUSG00000022641	Bbx	5530401J07Rik|5730403O13Rik	bobby sox HMG box containing	protein-coding	0.010000	0.353234			
merged_common-28	chr10	108036681	108036881	+	1.33709	NA	Intergenic	AmnSINE1|SINE|Deu	90136	NR_131147	628877	Mm.363120	NR_131147	ENSMUSG00000112910	Gm29685	-	predicted gene, 29685	ncRNA	0.000000	0.378109			-8(CTTTGCAAAATTAAAG,-,0.00)
Oct4_nocontrol_ChIP_peaks_unique-76	chr5	96980204	96980404	+	1.33709	NA	Intergenic	Intergenic	-17385	NM_080708	140780	Mm.281490	NM_080708	ENSMUSG00000034663	Bmp2k	4933417M22Rik|AA673486|AV128808|BIKE	BMP2 inducible kinase	protein-coding	0.020000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-1291	chr16	91728927	91729127	+	1.33709	NA	promoter-TSS (NM_001110276)	promoter-TSS (NM_001110276)	-225	NM_026994	66609	Mm.109823	NM_026994	ENSMUSG00000058240	Cryzl1	2210407J23Rik|2410006O11Rik|QOH-1	crystallin, zeta (quinone reductase)-like 1	protein-coding	0.050000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-160	chr1	152468560	152468760	+	1.33709	NA	intron (NM_177756, intron 2 of 11)	intron (NM_177756, intron 2 of 11)	68793	NM_177756	269132	Mm.23782	NM_177756	ENSMUSG00000032649	Colgalt2	AI427652|D730024P12|Glt25d2	collagen beta(1-O)galactosyltransferase 2	protein-coding	0.020000	0.497512			8(CATCTGACTTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1335	chr17	27977001	27977201	+	1.33709	NA	intron (NM_001286041, intron 3 of 23)	intron (NM_001286041, intron 3 of 23)	67795	NM_001286040	224650	Mm.32556	NM_181413	ENSMUSG00000024219	Anks1	Anks1a|mKIAA0229	ankyrin repeat and SAM domain containing 1	protein-coding	0.000000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-2222	chr5	31202368	31202568	+	1.33709	NA	promoter-TSS (NM_001177901)	promoter-TSS (NM_001177901)	-165	NM_175311	101023	Mm.45033	NM_175311	ENSMUSG00000043059	Zfp513	AW990386|D430028M17Rik|Znf513	zinc finger protein 513	protein-coding	0.040000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-1642	chr2	23156431	23156631	+	1.33709	NA	promoter-TSS (NM_013771)	promoter-TSS (NM_013771)	26	NM_013771	27377	Mm.23335	NM_013771	ENSMUSG00000026775	Yme1l1	FtsH1|Ftsh	YME1-like 1 (S. cerevisiae)	protein-coding	0.070000	0.567164			
ePOU_nocontrol_ChIP_peaks_unique-516	chr11	69045420	69045620	+	1.33709	NA	promoter-TSS (NM_011496)	promoter-TSS (NM_011496)	-117	NM_011496	20877	Mm.3488	NM_011496	ENSMUSG00000020897	Aurkb	AIM-1|AIRK2|AL022959|Aik2|Aim1|Ark2|AurB|IPL1|STK-1|Stk12|Stk5	aurora kinase B	protein-coding	0.040000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-1027	chr14	101653733	101653933	+	1.33709	NA	promoter-TSS (NM_016723)	promoter-TSS (NM_016723)	-134	NM_016723	50933	Mm.275970	NM_016723	ENSMUSG00000022111	Uchl3	-	ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)	protein-coding	0.040000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-291	chr10	37377980	37378180	+	1.33709	NA	Intergenic	Intergenic	-239154	NM_008538	17118	Mm.30059	NM_008538	ENSMUSG00000069662	Marcks	Macs|PKCSL	myristoylated alanine rich protein kinase C substrate	protein-coding	0.000000	0.407960		-43(CATGAATATTAAGG,-,0.00)	-48(CTTTACATGAATATTA,-,0.00),40(CTTTTCATATGTTAAT,+,0.00)
Oct4_nocontrol_ChIP_peaks_unique-21	chr12	9688373	9688573	+	1.33709	NA	Intergenic	MIR|SINE|MIR	114031	NM_011859	23967	Mm.45055	NM_011859	ENSMUSG00000048387	Osr1	Odd1|Osr	odd-skipped related transcription factor 1	protein-coding	0.000000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-2663	chr7	127345831	127346031	+	1.33709	NA	promoter-TSS (NM_146202)	promoter-TSS (NM_146202)	-617	NM_146202	233890	Mm.23031	NM_146202	ENSMUSG00000047371	Zfp768	BC026432|Znf768	zinc finger protein 768	protein-coding	0.100000	0.681592			
ePOU_nocontrol_ChIP_peaks_unique-589	chr11	103093973	103094173	+	1.33709	NA	intron (NM_152813, intron 1 of 14)	B4|SINE|B4	7585	NM_152813	72469	Mm.264743	NM_152813	ENSMUSG00000020937	Plcd3	2610205J15Rik|mKIAA1964	phospholipase C, delta 3	protein-coding	0.025000	0.497512			
merged_common-172	chr4	45531088	45531288	+	1.33709	NA	promoter-TSS (NM_001033306)	promoter-TSS (NM_001033306)	-360	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding	0.050000	0.527363			
ePOU_nocontrol_ChIP_peaks_unique-234	chr1	192297872	192298072	+	1.33709	NA	intron (NM_010600, intron 6 of 10)	intron (NM_010600, intron 6 of 10)	107195	NM_010600	16510	Mm.4489	NM_010600	ENSMUSG00000058248	Kcnh1	EAG1|Kv10.1|M-eag	potassium voltage-gated channel, subfamily H (eag-related), member 1	protein-coding	0.010000	0.447761		59(AATACATATACATT,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2869	chr9	47530093	47530293	+	1.33709	NA	promoter-TSS (NM_207676)	promoter-TSS (NM_207676)	23	NM_001310841	54725	Mm.234832	NM_018770	ENSMUSG00000032076	Cadm1	2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1	cell adhesion molecule 1	protein-coding	0.115000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-1557	chr19	24894633	24894833	+	1.33709	NA	Intergenic	Intergenic	6576	NM_008022	14237	Mm.377080	NM_008022	ENSMUSG00000051490	Foxd4	FREAC5|Fkh2	forkhead box D4	protein-coding	0.005000	0.333333			-43(GATTTAGTTTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1511	chr19	3767969	3768169	+	1.33709	NA	5' UTR (NM_001167889, exon 2 of 11)	5' UTR (NM_001167889, exon 2 of 11)	648	NM_001167884	225888	Mm.278578	NM_144871	ENSMUSG00000045098	Kmt5b	AA117471|C630029K18Rik|Suv4-20h1|Suv420h1	lysine methyltransferase 5B	protein-coding	0.125000	0.661692			
ePOU_nocontrol_ChIP_peaks_unique-984	chr14	63122394	63122594	+	1.33709	NA	promoter-TSS (NM_007798)	promoter-TSS (NM_007798)	32	NM_007798	13030	Mm.236553	NM_007798	ENSMUSG00000021939	Ctsb	CB	cathepsin B	protein-coding	0.095000	0.711443			
ePOU_nocontrol_ChIP_peaks_unique-964	chr14	50930899	50931099	+	1.33709	NA	promoter-TSS (NM_001310506)	promoter-TSS (NM_001310506)	-150	NM_001310507	219024	Mm.239117	NM_001033271	ENSMUSG00000035953	Pip4p1	BC039161|Tmem55b	phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1	protein-coding	0.085000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-1112	chr15	58854735	58854935	+	1.33709	NA	Intergenic	L1M5|LINE|L1	-17814	NM_026642	68260	Mm.278805	NM_026642	ENSMUSG00000037085	Trmt12	4632406N01Rik|AI449275|Tyw2	tRNA methyltranferase 12	protein-coding	0.015000	0.368159			21(ATTTGCATGACAAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2268	chr5	72487137	72487337	+	1.33709	NA	intron (NM_001122756, intron 1 of 21)	intron (NM_001122756, intron 1 of 21)	16971	NM_016869	53419	Mm.332425	NM_016869	ENSMUSG00000005220	Corin	AV273130|Lrp4	corin, serine peptidase	protein-coding	0.000000	0.263682			
ePOU_nocontrol_ChIP_peaks_unique-1586	chr19	44107485	44107685	+	1.33709	NA	promoter-TSS (NM_007700)	promoter-TSS (NM_007700)	-108	NM_001162410	12675	Mm.3996	NM_007700	ENSMUSG00000025199	Chuk	AI256658|Chuk1|Fbx24|Fbxo24|IKBKA|IKK alpha|IKK1|Ikka|NFKBIKA	conserved helix-loop-helix ubiquitous kinase	protein-coding	0.055000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-514	chr11	68142487	68142687	+	1.33709	NA	intron (NM_001361351, intron 6 of 6)	intron (NM_001361351, intron 6 of 6)	-78305	NR_105833	102465219		NR_105833	ENSMUSG00000099174	Mir6406	Gm27981|mmu-mir-6406	microRNA 6406	ncRNA	0.025000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-181	chr1	167308514	167308714	+	1.33709	NA	promoter-TSS (NM_001039483)	promoter-TSS (NM_001039483)	-56	NM_001039483	68944	Mm.330045	NM_026881	ENSMUSG00000052428	Tmco1	1190006A08Rik|4930403O06Rik|AA109065|AU022572|ESTM39	transmembrane and coiled-coil domains 1	protein-coding	0.140000	0.696517			
Oct4_nocontrol_ChIP_peaks_unique-48	chr17	63910765	63910965	+	1.33709	NA	intron (NM_001037997, intron 3 of 18)	Lx9|LINE|L1	-27107	NM_008000	14158	Mm.23039	NM_008000	ENSMUSG00000000127	Fer	AV082135|C330004K01Rik|Fert|Fert2	fer (fms/fps related) protein kinase	protein-coding	0.000000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-1608	chr19	59861943	59862143	+	1.33709	NA	Intergenic	Intergenic	81321	NM_001033172	74998	Mm.24167	NM_001033172	ENSMUSG00000040022	Rab11fip2	4930470G04Rik|A830046J09Rik|AW558126|Nrip11	RAB11 family interacting protein 2 (class I)	protein-coding	0.010000	0.303483			
ePOU_nocontrol_ChIP_peaks_unique-2359	chr5	138085197	138085397	+	1.33709	NA	intron (NM_029869, intron 1 of 3)	intron (NM_029869, intron 1 of 3)	213	NM_029869	74570	Mm.213114	NM_029869	ENSMUSG00000029729	Zkscan1	5930429A01Rik|9130423L19Rik|9230118B16Rik|AI646829|AI788588|C87323|KOX18|PHZ-37|ZNF139	zinc finger with KRAB and SCAN domains 1	protein-coding	0.085000	0.651741			
ePOU_nocontrol_ChIP_peaks_unique-654	chr12	26299528	26299728	+	1.33709	NA	Intergenic	Intergenic	-47082	NR_130981	75243	Mm.444753	NR_130981	ENSMUSG00000114048	4930549C15Rik	-	RIKEN cDNA 4930549C15 gene	ncRNA	0.005000	0.477612		-84(AATGCACATTCATG,-,0.00)	-36(AAATGCAAGACAAAGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-708	chr12	74666070	74666270	+	1.33709	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	368696	NM_198866	386753	Mm.341686	NM_198866		Dbpht2	Spot2	DNA binding protein with his-thr domain	protein-coding	0.000000	0.383085	37(ATTACATTATGCATT,+,0.00),37(ATTACATTATGCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2523	chr6	134566987	134567187	+	1.33709	NA	promoter-TSS (NM_008514)	promoter-TSS (NM_008514)	-174	NM_008514	16974	Mm.321990	NM_008514	ENSMUSG00000030201	Lrp6	C030016K15Rik|Cd|Gw|ska26|ska<m26Jus>|skax26	low density lipoprotein receptor-related protein 6	protein-coding	0.180000	0.791045			
ePOU_nocontrol_ChIP_peaks_unique-530	chr11	75461117	75461317	+	1.33709	NA	promoter-TSS (NR_030711)	promoter-TSS (NR_030711)	-322	NR_030711	100042498	Mm.482242	NR_030711	ENSMUSG00000085148	Mir22hg	2210403K04Rik|mir-22	Mir22 host gene (non-protein coding)	ncRNA	0.040000	0.512438			
ePOU_nocontrol_ChIP_peaks_unique-774	chr12	117156758	117156958	+	1.33709	NA	intron (NM_011215, intron 12 of 22)	intron (NM_011215, intron 12 of 22)	-5589	NR_033538	100038689	Mm.445351	NR_033538	ENSMUSG00000099907	Gm10421	-	predicted gene 10421	ncRNA	0.005000	0.348259			14(ATTTGAATGGCAGATT,-,0.00)
merged_common-169	chr4	12770472	12770672	+	1.33709	NA	Intergenic	Intergenic	-136265	NM_173746	208820	Mm.12057	NM_173746	ENSMUSG00000055963	Triqk	C130086A10|Gm11818	triple QxxK/R motif containing	protein-coding	0.015000	0.442786			75(CCGTTCTTATTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2045	chr4	6455986	6456186	+	1.33709	NA	Intergenic	Intergenic	-1815	NM_010945	18201	Mm.3059	NM_010945	ENSMUSG00000028245	Nsmaf	AA959567|C630007J05|Fan	neutral sphingomyelinase (N-SMase) activation associated factor	protein-coding	0.000000	0.517413			
ePOU_nocontrol_ChIP_peaks_unique-1990	chr3	116393184	116393384	+	1.33709	NA	intron (NM_001080818, intron 3 of 15)	(TATATG)n|Simple_repeat|Simple_repeat	30748	NM_001080818	229776	Mm.17647	NM_001080818	ENSMUSG00000033502	Cdc14a	A830059A17Rik|CDC14A2|CDC14a1|Cdc14	CDC14 cell division cycle 14A	protein-coding	0.005000	0.248756	-67(TTTGAATAATTTATT,+,0.00),-25(CATGCATTATGTACA,+,0.00),-25(CATGCATTATGTACA,-,0.00),-12(CATGCATTATGTATA,+,0.00),-12(CATGCATTATGTATA,-,0.00),49(TATCCATTATGTATA,+,0.00),49(TATCCATTATGTATA,-,0.00),68(TATCCATTATGTATA,+,0.00),68(TATCCATTATGTATA,-,0.00)	-44(TATGTATATGCATT,+,0.00),-44(TATGTATATGCATT,-,0.00),-5(TATGTATATGTATA,+,0.00),1(TATGTATATGTATA,+,0.00),7(TATGTATATGTATA,+,0.00),13(TATGTATATGTATA,+,0.00),19(TATGTATATGTATA,+,0.00),25(TATGTATATGTATA,+,0.00),31(TATGTATATGTATA,+,0.00),37(TATGTATATGTATA,+,0.00),56(TATGTATATGTATA,+,0.00),75(TATGTATATGTATA,+,0.00),81(TATGTATATGTATA,+,0.00),87(TATGTATATGTATA,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-611	chr11	110881253	110881453	+	1.33709	NA	Intergenic	Intergenic	-86680	NM_001252207	16517	Mm.30176	NM_010604	ENSMUSG00000051497	Kcnj16	6430410F18Rik|AI132396|Kir5.1	potassium inwardly-rectifying channel, subfamily J, member 16	protein-coding	0.005000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-829	chr13	46358962	46359162	+	1.33709	NA	Intergenic	RLTR25B|LTR|ERVK	-59238	NM_001081425	666794	Mm.38269	NM_001081425	ENSMUSG00000038132	Rbm24	6330546B05Rik|AI606861	RNA binding motif protein 24	protein-coding	0.005000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-2231	chr5	34636924	34637124	+	1.33709	NA	5' UTR (NM_026660, exon 1 of 13)	5' UTR (NM_026660, exon 1 of 13)	188	NM_001356978	68294	Mm.34564	NM_026660	ENSMUSG00000001082	Mfsd10	0610009O03Rik|Tetran	major facilitator superfamily domain containing 10	protein-coding	0.060000	0.616915			
ePOU_nocontrol_ChIP_peaks_unique-1986	chr3	114488757	114488957	+	1.33709	NA	Intergenic	Tigger5b|DNA|TcMar-Tigger	-415221	NM_153458	229759	Mm.54183	NM_153157	ENSMUSG00000027965	Olfm3	B230206G02Rik	olfactomedin 3	protein-coding	0.015000	0.412935			31(GCATTGTAATGCATAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1732	chr2	102146442	102146642	+	1.33709	NA	intron (NM_178886, intron 1 of 5)	L1MB8|LINE|L1	39918	NM_001290784	241576	Mm.489740	NM_178886	ENSMUSG00000048058	Ldlrad3	6430500P08|AI194318|Lrad3	low density lipoprotein receptor class A domain containing 3	protein-coding	0.015000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-2288	chr5	90271123	90271323	+	1.33709	NA	intron (NM_030886, intron 16 of 33)	intron (NM_030886, intron 16 of 33)	-47227	NM_001163456	231430	Mm.319697	NM_001033310	ENSMUSG00000035505	Cox18	BC038311	cytochrome c oxidase assembly protein 18	protein-coding	0.000000	0.268657			-1(ATTTACATAATAAAAG,-,0.00)
Oct4_nocontrol_ChIP_peaks_unique-22	chr12	69765149	69765349	+	1.33709	NA	intron (NM_183294, intron 3 of 9)	L1MC|LINE|L1	-1305	NR_030450	751538		NR_030450	ENSMUSG00000076065	Mir681	Mirn681|mmu-mir-681	microRNA 681	ncRNA	0.005000	0.388060			-30(CCTTTCTTATGCATTT,+,0.00),7(ATTTGAATAACAGAAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2815	chr8	124618195	124618395	+	1.33709	NA	intron (NM_023709, intron 19 of 19)	intron (NM_023709, intron 19 of 19)	42184	NM_023709	73647	Mm.6209	NM_023709	ENSMUSG00000031981	Capn9	2200003B16Rik|GC36|nCL-4|nCL4	calpain 9	protein-coding	0.020000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-967	chr14	52244385	52244585	+	1.33709	NA	intron (NM_201637, intron 1 of 37)	intron (NM_201637, intron 1 of 37)	13275	NM_201637	67772	Mm.289934	NM_201637	ENSMUSG00000053754	Chd8	5830451P18Rik|AU015341|Duplin|HELSNF1|mKIAA1564	chromodomain helicase DNA binding protein 8	protein-coding	0.060000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-1013	chr14	77146388	77146588	+	1.33709	NA	Intergenic	Intergenic	-10275	NM_001253759	239188	Mm.441158	NM_172813	ENSMUSG00000022012	Enox1	B230207J08|D230005D02Rik	ecto-NOX disulfide-thiol exchanger 1	protein-coding	0.000000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-2712	chr8	34580221	34580421	+	1.33709	NA	Intergenic	RLTR12E|LTR|ERVK	59995	NR_040706	330734	Mm.149998	NR_040706	ENSMUSG00000109819	B930018H19Rik	B930018H19	RIKEN cDNA B930018H19 gene	ncRNA	0.010000	0.402985			79(TTTATGTTATGCAAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-46	chr1	43139583	43139783	+	1.33709	NA	intron (NM_001289533, intron 3 of 5)	PB1D10|SINE|Alu	24278	NM_010212	14200	Mm.6799	NM_010212	ENSMUSG00000008136	Fhl2	FHL-2|SLIM-3|SLIM3	four and a half LIM domains 2	protein-coding	0.010000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-1957	chr3	95624909	95625109	+	1.33709	NA	promoter-TSS (NM_019561)	promoter-TSS (NM_019561)	29	NM_019561	56205	Mm.241365	NM_019561	ENSMUSG00000038619	Ensa	1700020C18Rik|2610007F17Rik|AI451924	endosulfine alpha	protein-coding	0.050000	0.592040			
ePOU_nocontrol_ChIP_peaks_unique-2895	chr9	64960846	64961046	+	1.33709	NA	promoter-TSS (NM_175153)	promoter-TSS (NM_175153)	16	NM_175153	69882	Mm.272616	NM_175153	ENSMUSG00000034263	Ints14	2010321M09Rik|Vwa9	integrator complex subunit 14	protein-coding	0.075000	0.611940			
ePOU_nocontrol_ChIP_peaks_unique-178	chr1	162557728	162557928	+	1.33709	NA	Intergenic	L1MB7|LINE|L1	-9483	NM_144877	71449	Mm.270569	NM_144877	ENSMUSG00000026694	Eef1aknmt	5630401D24Rik|Mettl13	EEF1A lysine and N-terminal methyltransferase	protein-coding	0.000000	0.338308			0(ATTTGCATGAAAGTGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1916	chr3	66985559	66985759	+	1.33709	NA	promoter-TSS (NM_025822)	promoter-TSS (NM_025822)	-3	NM_025822	66880	Mm.316418	NM_025822	ENSMUSG00000034544	Rsrc1	1200013F24Rik|SRrp53	arginine/serine-rich coiled-coil 1	protein-coding	0.065000	0.537313			
ePOU_nocontrol_ChIP_peaks_unique-493	chr11	59506311	59506511	+	1.33709	NA	non-coding (NR_015585, exon 1 of 5)	non-coding (NR_015585, exon 1 of 5)	229	NM_001130529	268417	Mm.239793	NM_172941	ENSMUSG00000020472	Zkscan17	Nizp1|Zfp496|Znf496	zinc finger with KRAB and SCAN domains 17	protein-coding	0.140000	0.800995			
merged_common-58	chr12	32074325	32074525	+	1.33709	NA	Intergenic	Intergenic	-13148	NM_001364407	19088	Mm.25594	NM_011158	ENSMUSG00000002997	Prkar2b	AI451071|AW061005|PKARIIbeta|Pkarb2|RII(beta)	protein kinase, cAMP dependent regulatory, type II beta	protein-coding	0.015000	0.368159		41(CATGAATATTCGTG,+,0.00),41(CATGAATATTCGTG,-,0.00)	13(CTATTGTTATGCATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1877	chr3	41373901	41374101	+	1.33709	NA	Intergenic	Intergenic	119198	NR_040385	78706	Mm.366094	NR_040385	ENSMUSG00000097639	Platr4	C430002E04Rik	pluripotency associated transcript 4	ncRNA	0.010000	0.373134			-44(ATTTGAATGGAAATTA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-76	chr1	65172406	65172606	+	1.33709	NA	intron (NM_001111320, intron 2 of 8)	intron (NM_001111320, intron 2 of 8)	6636	NM_010497	15926	Mm.9925	NM_010497	ENSMUSG00000025950	Idh1	AI314845|AI788952|E030024J03Rik|Id-1|Idh-1|Idpc	isocitrate dehydrogenase 1 (NADP+), soluble	protein-coding	0.010000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-1187	chr16	11066183	11066383	+	1.33709	NA	promoter-TSS (NM_009223)	promoter-TSS (NM_009223)	-15	NM_009223	20621	Mm.325800	NM_009223	ENSMUSG00000037972	Snn	2810407J07Rik|AI848521|AW547286	stannin	protein-coding	0.125000	0.756219			
ePOU_nocontrol_ChIP_peaks_unique-827	chr13	45837857	45838057	+	1.33709	NA	intron (NM_001199304, intron 3 of 6)	intron (NM_001199304, intron 3 of 6)	127034	NM_001199305	20238	Mm.342683	NM_009124	ENSMUSG00000046876	Atxn1	2900016G23Rik|Atx1|C85907|Gm10786|Sca1	ataxin 1	protein-coding	0.005000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-1944	chr3	85442363	85442563	+	1.33709	NA	Intergenic	Intergenic	-24914	NR_130326	100316670		NR_130326	ENSMUSG00000080424	Mir466k	Mirn466k|mmu-mir-466k	microRNA 466k	ncRNA	0.005000	0.482587		9(GATGCAAATTCATA,+,0.00),9(GATGCAAATTCATA,-,0.00)	-11(ATTTGCCTAACAAATT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1247	chr16	46982721	46982921	+	1.33709	NA	Intergenic	Intergenic	-485854	NM_021496	58998	Mm.40477	NM_021495	ENSMUSG00000022656	Nectin3	2610301B19Rik|3000002N23Rik|4921513D19Rik|AA407785|AU016832|AW538082|CD113|Pvrl3	nectin cell adhesion molecule 3	protein-coding	0.005000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-2635	chr7	99858929	99859129	+	1.33709	NA	promoter-TSS (NM_025668)	promoter-TSS (NM_025668)	-146	NM_025668	66624	Mm.30043	NM_025668	ENSMUSG00000035227	Spcs2	5730406I15Rik|AA408713|mKIAA0102	signal peptidase complex subunit 2 homolog (S. cerevisiae)	protein-coding	0.075000	0.616915			
ePOU_nocontrol_ChIP_peaks_unique-1099	chr15	44612837	44613037	+	1.33709	NA	Intergenic	Intergenic	-6290	NM_001357690	55960	Mm.287896	NM_019480	ENSMUSG00000022339	Ebag9	AI835379|Rcas1	estrogen receptor-binding fragment-associated gene 9	protein-coding	0.005000	0.373134		-52(CTTGAATATACATA,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-970	chr14	54641631	54641831	+	1.33709	NA	promoter-TSS (NM_199470)	promoter-TSS (NM_199470)	-367	NM_199470	239096	Mm.386871	NM_199470	ENSMUSG00000059674	Cdh24	1700040A22Rik	cadherin-like 24	protein-coding	0.075000	0.636816			
ePOU_nocontrol_ChIP_peaks_unique-821	chr13	40557509	40557709	+	1.33709	NA	Intergenic	Intergenic	-170199	NR_125899	102633805		NR_125899	ENSMUSG00000097752	Gm26688	Tfap2a-as1	predicted gene, 26688	ncRNA	0.005000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-1223	chr16	33379626	33379826	+	1.33709	NA	TTS (NR_045709)	TTS (NR_045709)	1010	NR_045709	100502742	Mm.217880	NR_045709	ENSMUSG00000097318	1700007L15Rik	linc-Iqcg|linc1609	RIKEN cDNA 1700007L15 gene	ncRNA	0.025000	0.442786			
merged_common-81	chr13	94976368	94976568	+	1.33709	NA	5' UTR (NM_172590, exon 1 of 13)	5' UTR (NM_172590, exon 1 of 13)	124	NM_172590	218460	Mm.33856	NM_172590	ENSMUSG00000042015	Wdr41	B830029I03Rik|MSTP048	WD repeat domain 41	protein-coding	0.145000	0.761194			
Oct4_nocontrol_ChIP_peaks_unique-101	chr9	65109435	65109635	+	1.33709	NA	intron (NM_020043, intron 1 of 19)	intron (NM_020043, intron 1 of 19)	8049	NM_020043	56741	Mm.209041	NM_020043	ENSMUSG00000032816	Igdcc4	DDM36|Nope	immunoglobulin superfamily, DCC subclass, member 4	protein-coding	0.030000	0.606965		-41(CATGAATATTCAGG,+,0.00),-41(CATGAATATTCAGG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2374	chr5	144703725	144703925	+	1.33709	NA	Intergenic	Intergenic	57753	NM_177735	243339	Mm.126793	NM_177735	ENSMUSG00000043388	Tmem130	BC067004|C130036G08	transmembrane protein 130	protein-coding	0.015000	0.398010	62(AATGAATAATATATT,+,0.00),62(AATGAATAATATATT,-,0.00)		74(ATTAACAGAAGAATGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-90	chr1	75888867	75889067	+	1.33709	NA	Intergenic	Intergenic	342505	NM_001357150	20536	Mm.5053	NM_009208	ENSMUSG00000006576	Slc4a3	A930038D23Rik|Ae3	solute carrier family 4 (anion exchanger), member 3	protein-coding	0.010000	0.447761			44(GCTTTGCATTGCAAAT,+,0.00),45(CTTTGCATTGCAAATG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-175	chr1	161147962	161148162	+	1.33709	NA	intron (NM_001368766, intron 2 of 7)	intron (NM_001368766, intron 2 of 7)	5350	NM_028664	73844	Mm.38830	NM_028664	ENSMUSG00000044835	Ankrd45	4933409K03Rik	ankyrin repeat domain 45	protein-coding	0.005000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-2293	chr5	97756497	97756697	+	1.33709	NA	Intergenic	MTD|LTR|ERVL-MaLR	274420	NM_133738	71914	Mm.24842	NM_133738	ENSMUSG00000029338	Antxr2	2310046B19Rik|AW561899|CMG-2|CMG2|cI-35	anthrax toxin receptor 2	protein-coding	0.000000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-644	chr12	12712668	12712868	+	1.33709	NA	Intergenic	Intergenic	-42851	NR_136889	102637952	Mm.421393	NR_136889		Gm34637	-	predicted gene, 34637	ncRNA	0.000000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-1743	chr2	109943297	109943497	+	1.33709	NA	intron (NM_172671, intron 1 of 17)	intron (NM_172671, intron 1 of 17)	25750	NM_172671	107515	Mm.277351	NM_172671	ENSMUSG00000050199	Lgr4	9130225G07|A330106J01Rik|A930009A08Rik|Gpr48	leucine-rich repeat-containing G protein-coupled receptor 4	protein-coding	0.010000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-186	chr1	169039180	169039380	+	1.33709	NA	Intergenic	Tigger8|DNA|TcMar-Tigger	-20191	NR_105772	102466632		NR_105772	ENSMUSG00000098829	Mir6354	Gm27282|mmu-mir-6354	microRNA 6354	ncRNA	0.000000	0.343284			-63(GTATAGTCATTCAAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1148	chr15	86295700	86295900	+	1.33709	NA	intron (NM_001358062, intron 2 of 9)	intron (NM_001358062, intron 2 of 9)	18125	NM_001358062	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding	0.015000	0.343284			
merged_common-117	chr17	25273544	25273744	+	1.33709	NA	promoter-TSS (NM_001357694)	promoter-TSS (NM_001357694)	-50	NM_001357694	22196	Mm.240044	NM_011665	ENSMUSG00000015120	Ube2i	5830467E05Rik|UBC9|Ubce2i|Ubce9	ubiquitin-conjugating enzyme E2I	protein-coding	0.100000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-1043	chr14	120722032	120722232	+	1.33709	NA	Intergenic	L1MA5|LINE|L1	-189062	NM_023579	70572	Mm.221452	NM_023579	ENSMUSG00000030662	Ipo5	1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5|imp5	importin 5	protein-coding	0.015000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-2001	chr3	122436323	122436523	+	1.33709	NA	intron (NM_013867, intron 2 of 11)	intron (NM_013867, intron 2 of 11)	16666	NM_013867	29815	Mm.45815	NM_013867	ENSMUSG00000028121	Bcar3	AI131758|AND-34	breast cancer anti-estrogen resistance 3	protein-coding	0.005000	0.407960	49(AATGAATTATTCATG,+,0.00),49(AATGAATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-909	chr13	113996134	113996334	+	1.33709	NA	intron (NM_172595, intron 4 of 4)	intron (NM_172595, intron 4 of 4)	155358	NR_045836	319803	Mm.386896	NM_177004	ENSMUSG00000114213	A430090L17Rik	-	RIKEN cDNA A430090L17 gene	ncRNA	0.005000	0.393035			
merged_common-59	chr12	33851891	33852091	+	1.33709	NA	Intergenic	Intergenic	-76434	NM_033522	114712	Mm.204643	NM_033522	ENSMUSG00000046518	Ferd3l	Mnato3|N-twist|Nato|Nato3|Ntwist|Ptfb|bHLHa31|fer3	Fer3 like bHLH transcription factor	protein-coding	0.000000	0.358209			
merged_common-134	chr2	26092158	26092358	+	1.33709	NA	5' UTR (NM_001037098, exon 1 of 6)	5' UTR (NM_001037098, exon 1 of 6)	138	NM_001037098	67991	Mm.131074	NM_026495	ENSMUSG00000026932	Nacc2	0610020I02Rik|AI448087|Btbd14a|C030048H19Rik	nucleus accumbens associated 2, BEN and BTB (POZ) domain containing	protein-coding	0.020000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-925	chr14	16429487	16429687	+	1.33709	NA	intron (NM_009409, intron 35 of 35)	intron (NM_009409, intron 35 of 35)	64381	NM_009409	21974	Mm.130362	NM_009409	ENSMUSG00000017485	Top2b	D230016L12Rik|Top-2	topoisomerase (DNA) II beta	protein-coding	0.000000	0.333333			-39(TAATTCTTATGCAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-559	chr11	88047434	88047634	+	1.33709	NA	5' UTR (NM_173374, exon 1 of 4)	5' UTR (NM_173374, exon 1 of 4)	161	NM_001078167	110809	Mm.391719	NM_173374	ENSMUSG00000018379	Srsf1	1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1	serine/arginine-rich splicing factor 1	protein-coding	0.100000	0.597015			
Oct4_nocontrol_ChIP_peaks_unique-55	chr2	30077512	30077712	+	1.33709	NA	Intergenic	CpG	-1086	NM_153805	263803	Mm.233843	NM_153805	ENSMUSG00000026785	Pkn3	AW209115|BC034126	protein kinase N3	protein-coding	0.105000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-1935	chr3	81452140	81452340	+	1.33709	NA	Intergenic	Intergenic	-349785	NR_138586	320566	Mm.208417	NR_138586	ENSMUSG00000103695	A830029E22Rik	-	RIKEN cDNA A830029E22 gene	ncRNA	0.000000	0.218905			
ePOU_nocontrol_ChIP_peaks_unique-1399	chr17	85064209	85064409	+	1.33709	NA	TTS (NM_009205)	TTS (NM_009205)	25958	NM_145984	213760	Mm.259035	NM_145984	ENSMUSG00000024127	Prepl	2810457N15Rik|9530014L06Rik|D030028O16Rik|mKIAA0436	prolyl endopeptidase-like	protein-coding	0.010000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-712	chr12	76404023	76404223	+	1.33709	NA	promoter-TSS (NM_008301)	promoter-TSS (NM_008301)	-53	NM_001002012	15512	Mm.296181	NM_008301	ENSMUSG00000059970	Hspa2	70kDa|HSP70.2|HSP70A2|Hsp70-2	heat shock protein 2	protein-coding	0.065000	0.592040			
ePOU_nocontrol_ChIP_peaks_unique-891	chr13	103065730	103065930	+	1.33709	NA	intron (NM_175171, intron 3 of 28)	intron (NM_175171, intron 3 of 28)	268662	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding	0.020000	0.393035			-8(ATTTGCTTCACAATCC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2834	chr9	14274878	14275078	+	1.33709	NA	Intergenic	Intergenic	-1323	NM_030261	75747	Mm.325126	NM_030261	ENSMUSG00000032009	Sesn3	5630400E15Rik|BC003348|SEST3	sestrin 3	protein-coding	0.025000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-2528	chr6	136828176	136828376	+	1.33709	NA	promoter-TSS (NM_021714)	promoter-TSS (NM_021714)	-60	NM_021714	60321	Mm.141197	NM_021714	ENSMUSG00000030216	Wbp11	2510026P17Rik|D6Wsu113e|Npwbp|SIPP1	WW domain binding protein 11	protein-coding	0.045000	0.472637			
ePOU_nocontrol_ChIP_peaks_unique-1360	chr17	46704826	46705026	+	1.33709	NA	promoter-TSS (NM_001357684)	promoter-TSS (NM_001357684)	76	NM_009358	21770	Mm.295009	NM_009358	ENSMUSG00000059409	Ppp2r5d	B'delta|TEG-271|Tex271	protein phosphatase 2, regulatory subunit B', delta	protein-coding	0.115000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-1668	chr2	37387761	37387961	+	1.33709	NA	intron (NM_001290642, intron 11 of 21)	L1MB7|LINE|L1	12267	NR_028535	100217435		NR_028535		Snord90	MBII-295	small nucleolar RNA, C/D box 90	snoRNA	0.000000	0.348259			-56(GCATTTCCATTAAAAT,+,0.00),-54(ATTTCCATTAAAATGG,-,0.00)
merged_common-163	chr3	81102381	81102581	+	1.33709	NA	intron (NM_019971, intron 1 of 5)	intron (NM_019971, intron 1 of 5)	66065	NM_019971	54635	Mm.331089	NM_019971	ENSMUSG00000028019	Pdgfc	1110064L01Rik|AI647969|PDGF-C|SCDGF|VEGF-E	platelet-derived growth factor, C polypeptide	protein-coding	0.005000	0.343284	29(AATGTTTTATGCATG,+,0.00),29(AATGTTTTATGCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2746	chr8	69209132	69209332	+	1.33709	NA	intron (NM_001013379, intron 1 of 3)	intron (NM_001013379, intron 1 of 3)	186	NM_001013379	234358	Mm.334577	NM_001013379	ENSMUSG00000059897	Zfp930	-	zinc finger protein 930	protein-coding	0.030000	0.557214			
ePOU_nocontrol_ChIP_peaks_unique-1433	chr18	23009574	23009774	+	1.33709	NA	intron (NM_001361224, intron 1 of 10)	L1MEf|LINE|L1	28989	NM_001161483	319211	Mm.209896	NM_199024	ENSMUSG00000041923	Nol4	1700013J13Rik|4930568N03Rik|Gm1262	nucleolar protein 4	protein-coding	0.000000	0.338308			-68(ACATTCTTATGTATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-483	chr11	53140969	53141169	+	1.33709	NA	intron (NM_177059, intron 7 of 15)	intron (NM_177059, intron 7 of 15)	-21013	NR_046047	790909	Mm.404626	NR_046047	ENSMUSG00000087668	Gm11186	-	predicted gene 11186	ncRNA	0.030000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-1170	chr15	102203177	102203377	+	1.33709	NA	promoter-TSS (NM_001289691)	promoter-TSS (NM_001289691)	-368	NM_001289690	68744	Mm.352945	NM_153194	ENSMUSG00000046897	Zfp740	1110034O07Rik|AW548228|Znf740	zinc finger protein 740	protein-coding	0.040000	0.542289			
ePOU_nocontrol_ChIP_peaks_unique-743	chr12	90916127	90916327	+	1.33709	NA	Intergenic	Intergenic	-129621	NR_045858	71349	Mm.442093	NR_045858	ENSMUSG00000085004	5430427M07Rik	-	RIKEN cDNA 5430427M07 gene	ncRNA	0.015000	0.437811			
Oct4_nocontrol_ChIP_peaks_unique-45	chr17	24351952	24352152	+	1.33709	NA	promoter-TSS (NM_013855)	promoter-TSS (NM_013855)	29	NM_013855	27410	Mm.239470	NM_013855	ENSMUSG00000024130	Abca3	1810036E22Rik|ABC-C|Abc3	ATP-binding cassette, sub-family A (ABC1), member 3	protein-coding	0.110000	0.736318			
ePOU_nocontrol_ChIP_peaks_unique-2404	chr6	28332670	28332870	+	1.33709	NA	intron (NM_001364596, intron 1 of 6)	L1MD|LINE|L1	65235	NM_001364596	627049	Mm.84441	NM_001081678	ENSMUSG00000039841	Zfp800	AA407452|Znf800	zinc finger protein 800	protein-coding	0.015000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-2755	chr8	71488478	71488678	+	1.33709	NA	promoter-TSS (NR_157145)	promoter-TSS (NR_157145)	-150	NR_157145	70359	Mm.142112	NM_032544	ENSMUSG00000007610	Gtpbp3	2410009F13Rik|AI607903	GTP binding protein 3	protein-coding	0.040000	0.477612			
ePOU_nocontrol_ChIP_peaks_unique-2019	chr3	144690936	144691136	+	1.33709	NA	3' UTR (NM_001282037, exon 11 of 11)	3' UTR (NM_001282037, exon 11 of 11)	29299	NM_001282042	54673	Mm.271775	NM_019464	ENSMUSG00000037062	Sh3glb1	AA409932|AI314629|AU015566|Bif-1|mKIAA0491	SH3-domain GRB2-like B1 (endophilin)	protein-coding	0.000000	0.323383			49(TTTTGCATAAAAGAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-549	chr11	85678486	85678686	+	1.33709	NA	intron (NM_138681, intron 24 of 25)	intron (NM_138681, intron 24 of 25)	41158	NR_045875	71489	Mm.442482	NR_045875	ENSMUSG00000086199	Bcas3os1	8430403D17Rik	breast carcinoma amplified sequence 3, opposite strand 1	ncRNA	0.015000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-2285	chr5	88494571	88494771	+	1.33709	NA	intron (NM_017468, intron 8 of 9)	URR1B|DNA|hAT-Charlie	6696	NM_017468	13801	Mm.8014	NM_017468	ENSMUSG00000029286	Enam	abte	enamelin	protein-coding	0.000000	0.353234			39(TCATTATAATGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-528	chr11	74925824	74926024	+	1.33709	NA	promoter-TSS (NM_001362743)	promoter-TSS (NM_001362743)	24	NM_001362743	27364	Mm.131443	NM_013761	ENSMUSG00000001323	Srr	M100034|Rgsc34|Srs	serine racemase	protein-coding	0.135000	0.721393			
ePOU_nocontrol_ChIP_peaks_unique-1034	chr14	106932864	106933064	+	1.33709	NA	Intergenic	Intergenic	-446444	NR_045938	73631	Mm.48862	NR_045938	ENSMUSG00000099794	1700128A07Rik	-	RIKEN cDNA 1700128A07 gene	ncRNA	0.005000	0.293532			
ePOU_nocontrol_ChIP_peaks_unique-86	chr1	74587841	74588041	+	1.33709	NA	promoter-TSS (NM_001310668)	promoter-TSS (NM_001310668)	87	NM_029888	77264	Mm.207298	NM_029888	ENSMUSG00000026135	Zfp142	9330177B18Rik|BB154236|mKIAA0236	zinc finger protein 142	protein-coding	0.070000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-2394	chr6	17666222	17666422	+	1.33709	NA	3' UTR (NM_007604, exon 10 of 10)	3' UTR (NM_007604, exon 10 of 10)	-27672	NM_001289626	64213	Mm.12051	NM_022332	ENSMUSG00000029534	St7	9430001H04Rik|Fam4a2|HELG|RAY1|SEN4|TSG7	suppression of tumorigenicity 7	protein-coding	0.000000	0.283582			
ePOU_nocontrol_ChIP_peaks_unique-1726	chr2	93822460	93822660	+	1.33709	NA	promoter-TSS (NM_001355076)	promoter-TSS (NM_001355076)	8	NM_001355075	14043	Mm.4336	NM_010163	ENSMUSG00000027198	Ext2	AI893565	exostoses (multiple) 2	protein-coding	0.120000	0.711443			
ePOU_nocontrol_ChIP_peaks_unique-2761	chr8	72919506	72919706	+	1.33709	NA	intron (NM_001317391, intron 7 of 15)	intron (NM_001317391, intron 7 of 15)	-96906	NR_039551	100628574		NR_039551	ENSMUSG00000093140	Mir28b	mmu-mir-28b	microRNA 28b	ncRNA	0.005000	0.383085			80(TCTTGCTTATTCATAT,+,0.00)
Oct4_nocontrol_ChIP_peaks_unique-38	chr15	95882074	95882274	+	1.33709	NA	intron (NM_175344, intron 2 of 19)	RLTR17B_Mm|LTR|ERVK	-52102	NR_155277	102634389	Mm.440563	NR_155276	ENSMUSG00000078648	LOC102634389	-	uncharacterized LOC102634389	ncRNA	0.000000	0.258706		-70(TATGTTTATGCATG,-,0.00),-44(TATGTATATTCATA,+,0.00),-44(TATGTATATTCATA,-,0.00),-34(CATACATATGTATA,+,0.00),-34(CATACATATGTATA,-,0.00),-24(TATATATATGCATA,+,0.00),-18(TATGCATATGCATA,+,0.00),-18(TATGCATATGCATA,-,0.00),71(CATACATATACATA,+,0.00),71(CATACATATACATA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2920	chr9	87595940	87596140	+	1.33709	NA	Intergenic	Intergenic	135220	NM_023814	76365	Mm.158789	NM_023814	ENSMUSG00000032419	Tbx18	2810012F10Rik|2810404D13Rik	T-box18	protein-coding	0.000000	0.368159	-53(CATGCATTATTCACT,+,0.00),-53(CATGCATTATTCACT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2225	chr5	32278441	32278641	+	1.33709	NA	intron (NM_030072, intron 9 of 38)	intron (NM_030072, intron 9 of 38)	39457	NM_001081407	665270	Mm.160067	NM_030072	ENSMUSG00000029134	Plb1	4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606	phospholipase B1	protein-coding	0.005000	0.388060	-39(CATGAATTATGCATC,+,0.00),-39(CATGAATTATGCATC,-,0.00)	-59(TATGCATATTAATG,+,0.00),-59(TATGCATATTAATG,-,0.00)	
merged_common-105	chr16	11273050	11273250	+	1.33709	NA	Intergenic	Intergenic	-18705	NR_035466	100316833		NR_035466	ENSMUSG00000088544	Mir1945	mir-1945|mmu-mir-1945	microRNA 1945	ncRNA	0.005000	0.472637	68(CCTGCATTATTCAAA,-,0.00)		-99(AGATTGTTATTTAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1193	chr16	16273621	16273821	+	1.33709	NA	promoter-TSS (NR_153656)	promoter-TSS (NR_153656)	-596	NR_153656	433003		NR_153656		Gm5481	EG433003	ribosomal protein L30 pseudogene	pseudo	0.005000	0.313433			76(CTTTTCAAGAAAATGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1061	chr15	10276878	10277078	+	1.33709	NA	intron (NM_001253781, intron 1 of 9)	intron (NM_001253781, intron 1 of 9)	-16673	NM_001253782	19116	Mm.10516	NM_011169	ENSMUSG00000005268	Prlr	AI987712|Pr-1|Pr-3|Prlr-rs1	prolactin receptor	protein-coding	0.000000	0.343284			-1(ATATGAATTACAATGA,-,0.00),21(ATTAGCATTAGAAAGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-284	chr10	29485645	29485845	+	1.33709	NA	intron (NM_028351, intron 4 of 4)	intron (NM_028351, intron 4 of 4)	50122	NM_028351	72780	Mm.45191	NM_028351	ENSMUSG00000019880	Rspo3	2810459H04Rik|AW742308|Cristin1|Thsd2	R-spondin 3	protein-coding	0.005000	0.328358			
merged_common-83	chr13	97406095	97406295	+	1.33709	NA	Intergenic	Intergenic	-28775	NR_110432	100039691	Mm.219358	NR_110430	ENSMUSG00000078952	Lncenc1	Gm11019|Gm2373|Lincenc1|Platr18|linc-Enc1	long non-coding RNA, embryonic stem cells expressed 1	ncRNA	0.000000	0.318408		-33(AATGTATATTTATT,+,0.00)	9(CAGTTTTTATGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2475	chr6	87009561	87009761	+	1.33709	NA	promoter-TSS (NM_001170591)	promoter-TSS (NM_001170591)	-175	NM_001170591	56748	Mm.23809	NM_020045	ENSMUSG00000029993	Nfu1	0610006G17Rik|CGI-33|Hirip5	NFU1 iron-sulfur cluster scaffold	protein-coding	0.010000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-2745	chr8	68638488	68638688	+	1.33709	NA	intron (NM_172753, intron 2 of 9)	intron (NM_172753, intron 2 of 9)	96497	NM_001364256	234356	Mm.334569	NM_172753	ENSMUSG00000036356	Csgalnact1	4732435N03Rik|CSGalNAcT-1	chondroitin sulfate N-acetylgalactosaminyltransferase 1	protein-coding	0.005000	0.412935	-9(CATGTATGATGGATA,+,0.00)		65(ATTTGAAACATAAAAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1963	chr3	97634308	97634508	+	1.33709	NA	intron (NM_001355119, intron 2 of 8)	B4|SINE|B4	5389	NM_001355119	14263	Mm.385180	NM_010232	ENSMUSG00000028088	Fmo5	5033418D19Rik|AI195026	flavin containing monooxygenase 5	protein-coding	0.015000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-1852	chr3	19189004	19189204	+	1.33709	NA	intron (NM_001356295, intron 1 of 7)	intron (NM_001356295, intron 1 of 7)	809	NM_001356295	67472	Mm.45125	NM_026182	ENSMUSG00000027601	Mtfr1	1300002C08Rik|1700080D04Rik|2810026O10Rik|4930579E05Rik|Chppr|Fam54a2	mitochondrial fission regulator 1	protein-coding	0.010000	0.328358			-44(TTTTACATTACAATGA,-,0.00),68(ATTTAAAAGGTAAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-535	chr11	79646589	79646789	+	1.33709	NA	intron (NM_175543, intron 3 of 14)	intron (NM_175543, intron 3 of 14)	-23526	NR_003283	790912	Mm.447313	NR_003283	ENSMUSG00000087434	Rab11fip4os1	Gm11202	RAB11 family interacting protein 4 (class II), opposite strand 1	ncRNA	0.030000	0.557214			-46(CGTTTGTTATGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1582	chr19	42129092	42129292	+	1.33709	NA	promoter-TSS (NM_027106)	promoter-TSS (NM_027106)	-199	NM_027106	69534	Mm.30060	NM_027106	ENSMUSG00000018821	Avpi1	2310008N12Rik|AA410041|VIT32|esu|mVIT32	arginine vasopressin-induced 1	protein-coding	0.075000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-437	chr11	22374432	22374632	+	1.33709	NA	Intergenic	Intergenic	-87737	NM_001252515	216565	Mm.491265	NM_153078	ENSMUSG00000042302	Ehbp1	AF424697|Flj21950|NACSIN	EH domain binding protein 1	protein-coding	0.005000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-1021	chr14	93693483	93693683	+	1.33709	NA	intron (NM_001081377, intron 2 of 4)	intron (NM_001081377, intron 2 of 4)	197086	NM_001271799	211712	Mm.37126	NM_001081377	ENSMUSG00000055421	Pcdh9	-	protocadherin 9	protein-coding	0.005000	0.298507		15(GATGCTTATGCATA,+,0.00),15(GATGCTTATGCATA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2289	chr5	90908755	90908955	+	1.33709	NA	Intergenic	Intergenic	4956	NM_009140	20310	Mm.4979	NM_009140	ENSMUSG00000058427	Cxcl2	CINC-2a|GROb|Gro2|MIP-2|MIP-2a|Mgsa-b|Mip2|Scyb|Scyb2	chemokine (C-X-C motif) ligand 2	protein-coding	0.025000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-763	chr12	105774796	105774996	+	1.33709	NA	intron (NM_030187, intron 16 of 17)	L1M2|LINE|L1	-9801	NM_001347440	18789	Mm.255877	NM_011112	ENSMUSG00000021111	Papola	Pap|PapIII|Plap	poly (A) polymerase alpha	protein-coding	0.020000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-973	chr14	56512220	56512420	+	1.33709	NA	exon (NM_001033043, exon 32 of 37)	exon (NM_001033043, exon 32 of 37)	59526	NM_001014996	219103	Mm.212525	NM_001014996	ENSMUSG00000064128	Cenpj	4932437H03Rik|CPAP|Gm81|LAP|LIP1|Sas4	centromere protein J	protein-coding	0.030000	0.592040			
ePOU_nocontrol_ChIP_peaks_unique-2924	chr9	91476577	91476777	+	1.33709	NA	Intergenic	Intergenic	107705	NM_009576	22774	Mm.8062	NM_009576	ENSMUSG00000036972	Zic4	-	zinc finger protein of the cerebellum 4	protein-coding	0.005000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-2601	chr7	70937179	70937379	+	1.33709	NA	Intergenic	Intergenic	-570533	NM_183261	11819	Mm.158143	NM_009697	ENSMUSG00000030551	Nr2f2	2700033K02Rik|9430015G03Rik|ARP-1|Aporp1|COUP-TF2|COUP-TFII|COUPTFB|EAR3|SVP40|Tcfcoup2	nuclear receptor subfamily 2, group F, member 2	protein-coding	0.010000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-2671	chr7	130867842	130868042	+	1.33709	NA	intron (NM_001357696, intron 1 of 12)	intron (NM_001357696, intron 1 of 12)	2218	NM_001357696	101476	Mm.323554	NM_133942	ENSMUSG00000040268	Plekha1	AA960558|C920009D07Rik|TAPP1	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1	protein-coding	0.000000	0.343284			16(TTATTCTCATTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1338	chr17	28486121	28486321	+	1.33709	NA	promoter-TSS (NM_010220)	promoter-TSS (NM_010220)	-72	NM_010220	14229	Mm.276405	NM_010220	ENSMUSG00000024222	Fkbp5	D17Ertd592e|Dit1|FKBP-5|FKBP51	FK506 binding protein 5	protein-coding	0.125000	0.721393			
ePOU_nocontrol_ChIP_peaks_unique-898	chr13	108746941	108747141	+	1.33709	NA	intron (NM_011056, intron 1 of 16)	intron (NM_011056, intron 1 of 16)	92864	NM_011056	238871	Mm.434429	NM_011056	ENSMUSG00000021699	Pde4d	9630011N22Rik|Dpde3	phosphodiesterase 4D, cAMP specific	protein-coding	0.005000	0.303483			-95(ATTTGAATAACAAGGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2596	chr7	66836868	66837068	+	1.33709	NA	Intergenic	L1MB4|LINE|L1	-2767	NM_001033877	233332	Mm.445763	NM_001033877	ENSMUSG00000058145	Adamts17	AU023434	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17	protein-coding	0.015000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-1581	chr19	41981392	41981592	+	1.33709	NA	promoter-TSS (NM_028152)	promoter-TSS (NM_028152)	-271	NM_145500	226122	Mm.22948	NM_145500	ENSMUSG00000025171	Ubtd1	BC016129	ubiquitin domain containing 1	protein-coding	0.115000	0.751244			
Oct4_nocontrol_ChIP_peaks_unique-41	chr16	45244755	45244955	+	1.33709	NA	intron (NM_001037719, intron 4 of 5)	intron (NM_001037719, intron 4 of 5)	20518	NM_001037719	208154	Mm.38199	NM_177584	ENSMUSG00000052013	Btla	A630002H24	B and T lymphocyte associated	protein-coding	0.000000	0.308458			30(TATTTATGTTGCAAAT,+,0.00)
merged_common-183	chr4	136317800	136318000	+	1.33709	NA	intron (NM_001355182, intron 4 of 10)	ID4|SINE|ID	6302	NM_001355182	74326	Mm.31051	NM_028871	ENSMUSG00000066037	Hnrnpr	2610003J05Rik|2610528B01Rik|Hnrpr	heterogeneous nuclear ribonucleoprotein R	protein-coding	0.000000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-825	chr13	43864582	43864782	+	1.33709	NA	Intergenic	CpG	79570	NM_009856	12522	Mm.57175	NM_009856	ENSMUSG00000015396	Cd83	-	CD83 antigen	protein-coding	0.095000	0.696517			
ePOU_nocontrol_ChIP_peaks_unique-2402	chr6	24664941	24665141	+	1.33709	NA	promoter-TSS (NM_001167745)	promoter-TSS (NM_001167745)	-46	NM_001167745	73178	Mm.1574	NM_028459	ENSMUSG00000029684	Wasl	2900021I12Rik|3110031I02Rik|N-WASP	Wiskott-Aldrich syndrome-like (human)	protein-coding	0.125000	0.731343			
ePOU_nocontrol_ChIP_peaks_unique-646	chr12	16838006	16838206	+	1.33709	NA	Intergenic	MTE2a|LTR|ERVL-MaLR	27141	NR_027677	50496	Mm.23296	NM_033270	ENSMUSG00000057469	E2f6	AI462434|E2F6a|E2F6b|EMA	E2F transcription factor 6	protein-coding	0.010000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-901	chr13	109691187	109691387	+	1.33709	NA	intron (NM_011056, intron 3 of 16)	intron (NM_011056, intron 3 of 16)	-212522	NR_035442	100316683		NR_035442	ENSMUSG00000084651	Mir1904	Mirn1904|mmu-mir-1904	microRNA 1904	ncRNA	0.000000	0.333333			
merged_common-133	chr2	20352693	20352893	+	1.33709	NA	intron (NM_001081006, intron 2 of 21)	intron (NM_001081006, intron 2 of 21)	62880	NM_001081006	208618	Mm.237935	NM_029895	ENSMUSG00000036617	Etl4	6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt	enhancer trap locus 4	protein-coding	0.000000	0.308458			
ePOU_nocontrol_ChIP_peaks_unique-1950	chr3	88510102	88510302	+	1.33709	NA	Intergenic	Intergenic	-6850	NM_001111102	16905	Mm.243014	NM_019390	ENSMUSG00000028063	Lmna	Dhe	lamin A	protein-coding	0.045000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-2142	chr4	117835804	117836004	+	1.33709	NA	intron (NM_001369016, intron 1 of 13)	CpG	294	NM_001369016	14664	Mm.244549	NM_008135	ENSMUSG00000028542	Slc6a9	Glyt-1|Glyt1	solute carrier family 6 (neurotransmitter transporter, glycine), member 9	protein-coding	0.115000	0.721393			
ePOU_nocontrol_ChIP_peaks_unique-587	chr11	102656790	102656990	+	1.33709	NA	Intergenic	Intergenic	-8695	NM_001127576	268491	Mm.447643	NM_001127576	ENSMUSG00000051455	Meioc	Gm1564|Gm663	meiosis specific with coiled-coil domain	protein-coding	0.000000	0.318408			
ePOU_nocontrol_ChIP_peaks_unique-385	chr10	107221393	107221593	+	1.33709	NA	Intergenic	Intergenic	-50338	NM_001039354	108030	Mm.268025	NM_001033223	ENSMUSG00000019906	Lin7a	AI848705|LIN-7A|MALS-1|TIP-33|Veli|Veli1	lin-7 homolog A (C. elegans)	protein-coding	0.010000	0.358209		47(CATGCATATGCAGA,+,0.00),47(CATGCATATGCAGA,-,0.00)	-60(ATTTGAAAGTGAATGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2362	chr5	139484441	139484641	+	1.33709	NA	promoter-TSS (NM_001159908)	promoter-TSS (NM_001159908)	-50	NM_133349	100494	Mm.24521	NM_133349	ENSMUSG00000053581	Zfand2a	AA407930|AU016206|Airap	zinc finger, AN1-type domain 2A	protein-coding	0.070000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-1906	chr3	63223933	63224133	+	1.33709	NA	Intergenic	Intergenic	-71178	NM_001357335	17380	Mm.296022	NM_008604	ENSMUSG00000027820	Mme	6030454K05Rik|C85356|CALLA|CD10|NEP|SFE	membrane metallo endopeptidase	protein-coding	0.005000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-971	chr14	54864150	54864350	+	1.33709	NA	promoter-TSS (NM_001177705)	promoter-TSS (NM_001177705)	-92	NM_001177705	239099	Mm.280994	NM_183174	ENSMUSG00000057156	Homez	mKIAA1443	homeodomain leucine zipper-encoding gene	protein-coding	0.065000	0.621891			
ePOU_nocontrol_ChIP_peaks_unique-32	chr1	33814305	33814505	+	1.33709	NA	5' UTR (NM_001359274, exon 1 of 14)	5' UTR (NM_001359274, exon 1 of 14)	190	NM_001290700	98403	Mm.289103	NM_133817	ENSMUSG00000042197	Zfp451	4930515K21Rik|4933435G09Rik|AI596398|COASTER|Kiaa0576-hp|Znf451|mKIAA1702	zinc finger protein 451	protein-coding	0.145000	0.771144			
ePOU_nocontrol_ChIP_peaks_unique-2658	chr7	122594094	122594294	+	1.33709	NA	intron (NM_001316672, intron 13 of 16)	L1MB2|LINE|L1	-77550	NM_019430	54376	Mm.444212	NM_019430	ENSMUSG00000066189	Cacng3	-	calcium channel, voltage-dependent, gamma subunit 3	protein-coding	0.000000	0.283582			19(ACATTATTGTGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-477	chr11	47553857	47554057	+	1.33709	NA	Intergenic	Intergenic	-174632	NM_011891	24052	Mm.34175	NM_011891	ENSMUSG00000020354	Sgcd	35DAG|A530047J11Rik|AI504364|AW547581|SG-delta|delta-SG	sarcoglycan, delta (dystrophin-associated glycoprotein)	protein-coding	0.005000	0.378109		19(AATGCATATAAATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-469	chr11	42874041	42874241	+	1.33709	NA	Intergenic	Intergenic	-275736	NM_176999	319767	Mm.252339	NM_176999	ENSMUSG00000055415	Atp10b	5930426O13Rik|9030605H24Rik	ATPase, class V, type 10B	protein-coding	0.005000	0.353234			
merged_common-210	chr6	112885327	112885527	+	1.33709	NA	intron (NM_080448, intron 1 of 21)	intron (NM_080448, intron 1 of 21)	61839	NM_080448	259302	Mm.236401	NM_080448	ENSMUSG00000030257	Srgap3	AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411	SLIT-ROBO Rho GTPase activating protein 3	protein-coding	0.000000	0.497512			
ePOU_nocontrol_ChIP_peaks_unique-1498	chr18	73745530	73745730	+	1.33709	NA	intron (NM_053255, intron 2 of 3)	intron (NM_053255, intron 2 of 3)	8849	NM_053255	114615	Mm.50642	NM_053255	ENSMUSG00000036941	Elac1	2610018O07Rik|8430417G19Rik	elaC ribonuclease Z 1	protein-coding	0.000000	0.343284			53(CTTTTGTTTTGCTGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-395	chr10	115958701	115958901	+	1.33709	NA	Intergenic	Intergenic	-59562	NM_011217	19279	Mm.336316	NM_011217	ENSMUSG00000020151	Ptprr	Gmcp1|PTP-SL|PTPBR7|RPTPRR|mPTP213	protein tyrosine phosphatase, receptor type, R	protein-coding	0.010000	0.353234		-37(TATGCATTTGCATC,+,0.00),-37(TATGCATTTGCATC,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-992	chr14	65451974	65452174	+	1.33709	NA	Intergenic	RSINE1|SINE|B4	-26602	NM_010932	18155	Mm.16347	NM_010932	ENSMUSG00000045731	Pnoc	N/OFQ|Npnc1|OFQ/N	prepronociceptin	protein-coding	0.010000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-2652	chr7	114296787	114296987	+	1.33709	NA	Intergenic	B4A|SINE|B4	-20771	NM_011965	26440	Mm.121265	NM_011965	ENSMUSG00000030751	Psma1	C2|HC2|Pros-30|alpha-type	proteasome (prosome, macropain) subunit, alpha type 1	protein-coding	0.005000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-1692	chr2	60643498	60643698	+	1.33709	NA	intron (NM_001159564, intron 10 of 17)	L1ME4a|LINE|L1	30095	NM_021359	16420	Mm.98193	NM_021359	ENSMUSG00000026971	Itgb6	2210409C20Rik|4831415H04Rik	integrin beta 6	protein-coding	0.010000	0.318408			
ePOU_nocontrol_ChIP_peaks_unique-1324	chr17	24169430	24169630	+	1.33709	NA	promoter-TSS (NM_001361535)	promoter-TSS (NM_001361535)	-80	NM_001361534	11984	Mm.30155	NM_009729	ENSMUSG00000024121	Atp6v0c	Atp6c|Atp6c2|Atp6l|Atpl|Atpl-rs1|PL16|VATL|Vma3	ATPase, H+ transporting, lysosomal V0 subunit C	protein-coding	0.095000	0.706468			
ePOU_nocontrol_ChIP_peaks_unique-683	chr12	50538392	50538592	+	1.33709	NA	intron (NM_008858, intron 1 of 18)	intron (NM_008858, intron 1 of 18)	110731	NM_008858	18760	Mm.133719	NM_008858	ENSMUSG00000002688	Prkd1	PKD|PKD1|Pkcm|Prkcm	protein kinase D1	protein-coding	0.005000	0.417910		8(CATGCATATTCATG,+,0.00),8(CATGCATATTCATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-818	chr13	38600033	38600233	+	1.33709	NA	Intergenic	Intergenic	34959	NM_139063	17828	Mm.261554	NM_139063	ENSMUSG00000038982	Bloc1s5	1810074A19Rik|Muted|mu	biogenesis of lysosomal organelles complex-1, subunit 5, muted	protein-coding	0.005000	0.283582			
ePOU_nocontrol_ChIP_peaks_unique-710	chr12	76004954	76005154	+	1.33709	NA	intron (NM_001005510, intron 62 of 115)	intron (NM_001005510, intron 62 of 115)	95951	NR_039560	100628610		NR_039560	ENSMUSG00000092922	Mir5101	mmu-mir-5101|mu-mir-5101	microRNA 5101	ncRNA	0.020000	0.497512			
ePOU_nocontrol_ChIP_peaks_unique-1471	chr18	56975269	56975469	+	1.33709	NA	promoter-TSS (NM_029909)	promoter-TSS (NM_029909)	10	NM_029909	77422	Mm.256874	NM_029909	ENSMUSG00000024592	C330018D20Rik	AU018666	RIKEN cDNA C330018D20 gene	protein-coding	0.135000	0.751244			
ePOU_nocontrol_ChIP_peaks_unique-615	chr11	116433851	116434051	+	1.33709	NA	promoter-TSS (NM_176902)	promoter-TSS (NM_176902)	-143	NM_176902	319370	Mm.258466	NM_176902	ENSMUSG00000050628	Ubald2	1110014K08Rik|D030012E24Rik|Fam100b	UBA-like domain containing 2	protein-coding	0.085000	0.636816			
ePOU_nocontrol_ChIP_peaks_unique-222	chr1	184845788	184845988	+	1.33709	NA	promoter-TSS (NM_133684)	promoter-TSS (NM_133684)	20	NM_001368285	67247	Mm.177724	NM_133684	ENSMUSG00000073481	Marc2	2810484M10Rik|Mosc2|mARC1	mitochondrial amidoxime reducing component 2	protein-coding	0.075000	0.661692			
ePOU_nocontrol_ChIP_peaks_unique-2274	chr5	76396136	76396336	+	1.33709	NA	Intergenic	Intergenic	-32459	NM_019515	56183	Mm.154879	NM_019515	ENSMUSG00000029236	Nmu	-	neuromedin U	protein-coding	0.005000	0.303483			-4(ATTTGCATAAATAACA,-,0.00),10(CATTACTTATTTAAAT,+,0.00)
merged_common-241	chrUn_JH584304	47366	47566	+	1.33709	NA	Intergenic	Intergenic	12223	NR_003518	66776	Mm.247625	NR_003518		Pisd-ps3	4933439C20Rik	phosphatidylserine decarboxylase, pseudogene 3	pseudo	0.025000	0.477612			
ePOU_nocontrol_ChIP_peaks_unique-815	chr13	34129823	34130023	+	1.33709	NA	intron (NM_023716, intron 1 of 3)	intron (NM_023716, intron 1 of 3)	431	NM_023716	73710	Mm.379227	NM_023716	ENSMUSG00000045136	Tubb2b	2410129E14Rik|brdp	tubulin, beta 2B class IIB	protein-coding	0.040000	0.497512			
merged_common-157	chr3	26751103	26751303	+	1.33709	NA	intron (NM_027583, intron 3 of 9)	Charlie1a|DNA|hAT-Charlie	113572	NM_027583	70862	Mm.330943	NM_027583	ENSMUSG00000039335	Spata16	4921511F01Rik|4930503K02Rik|Nyd-sp12	spermatogenesis associated 16	protein-coding	0.005000	0.318408			
ePOU_nocontrol_ChIP_peaks_unique-1823	chr2	164521839	164522039	+	1.33709	NA	Intergenic	MER21C|LTR|ERVL	24414	NM_001362644	78928	Mm.28228	NM_133779	ENSMUSG00000017721	Pigt	2510012P17Rik|4930534E15Rik|CGI-06|NDAP|Ndap7	phosphatidylinositol glycan anchor biosynthesis, class T	protein-coding	0.025000	0.512438			
ePOU_nocontrol_ChIP_peaks_unique-1889	chr3	52941197	52941397	+	1.33709	NA	Intergenic	Intergenic	-13631	NR_040555	622124	Mm.389434	NR_040555	ENSMUSG00000104401	Gm20750	-	predicted gene, 20750	ncRNA	0.020000	0.452736			
merged_common-64	chr12	69017094	69017294	+	1.33709	NA	Intergenic	Intergenic	141992	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding	0.020000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-1922	chr3	69316621	69316821	+	1.33709	NA	promoter-TSS (NM_178726)	promoter-TSS (NM_178726)	-197	NM_178726	242083	Mm.40577	NM_178726	ENSMUSG00000027784	Ppm1l	3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175	protein phosphatase 1 (formerly 2C)-like	protein-coding	0.115000	0.741294			
ePOU_nocontrol_ChIP_peaks_unique-1456	chr18	43073183	43073383	+	1.33709	NA	Intergenic	B4|SINE|B4	-13812	NM_028392	72930	Mm.26134	NM_027531	ENSMUSG00000024500	Ppp2r2b	2900026H06Rik|6330404L05Rik|E130009M08Rik|PP2A-PR55B|PR55-BETA|SCA12	protein phosphatase 2, regulatory subunit B, beta	protein-coding	0.005000	0.412935			-69(ATTTGCATTATTAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1447	chr18	36669962	36670162	+	1.33709	NA	exon (NM_025291, exon 2 of 5)	exon (NM_025291, exon 2 of 5)	249	NR_028355	24068	Mm.29058	NM_025291	ENSMUSG00000006050	Sra1	AA959952|Sra|Srap|Straa1|Strra1	steroid receptor RNA activator 1	protein-coding	0.055000	0.592040			
ePOU_nocontrol_ChIP_peaks_unique-75	chr1	63909451	63909651	+	1.33709	NA	Intergenic	Intergenic	-55176	NR_027824	433315	Mm.342696	NM_001013800	ENSMUSG00000044689	Gm13749	-	predicted gene 13749	ncRNA	0.005000	0.243781			-49(ATATTGCCATTGAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-780	chr13	5917114	5917314	+	1.33709	NA	Intergenic	Intergenic	55725	NM_011803	23849	Mm.275036	NM_011803	ENSMUSG00000000078	Klf6	AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9	Kruppel-like factor 6	protein-coding	0.010000	0.343284			-75(ATTAACATAACACATG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2938	chr9	106211925	106212125	+	1.33709	NA	intron (NM_011876, intron 3 of 8)	intron (NM_011876, intron 3 of 8)	8917	NM_011876	23999	Mm.274346	NM_011876	ENSMUSG00000023277	Twf2	A6-related|AU014993|Ptk9l|Ptk9r	twinfilin actin binding protein 2	protein-coding	0.035000	0.606965			
ePOU_nocontrol_ChIP_peaks_unique-2844	chr9	21955682	21955882	+	1.33709	NA	promoter-TSS (NM_025870)	promoter-TSS (NM_025870)	29	NM_025870	66962	Mm.46647	NM_025870	ENSMUSG00000051238	Swsap1	2310047B19Rik	SWIM type zinc finger 7 associated protein 1	protein-coding	0.095000	0.646766			
merged_common-221	chr7	126695738	126695938	+	1.33709	NA	promoter-TSS (NM_029420)	promoter-TSS (NM_029420)	-55	NR_033446	75764	Mm.280573	NM_029420	ENSMUSG00000059772	Slx1b	1110030E23Rik|2410170E21Rik|4833422P03Rik|AI853643|Giyd1|Giyd2	SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	protein-coding	0.065000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-2828	chr9	9117186	9117386	+	1.33709	NA	intron (NM_027823, intron 3 of 22)	intron (NM_027823, intron 3 of 22)	-119002	NR_045754	100579151	Mm.412450	NR_045754	ENSMUSG00000085253	Gm16833	-	predicted gene, 16833	ncRNA	0.005000	0.432836			
merged_common-89	chr14	64278533	64278733	+	1.33709	NA	intron (NM_001253715, intron 2 of 4)	intron (NM_001253715, intron 2 of 4)	138323	NM_001253716	110265	Mm.26713	NM_026322	ENSMUSG00000054733	Msra	2310045J23Rik|6530413P12Rik|MSR-A	methionine sulfoxide reductase A	protein-coding	0.010000	0.407960	84(TATGCAGAATGCATG,+,0.00),84(TATGCAGAATGCATG,-,0.00)		56(GTTTGCATAACAATCC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1839	chr2	180582504	180582704	+	1.33709	NA	intron (NR_151481, intron 1 of 5)	CpG	1382	NR_151481	73247	Mm.426558	NM_028479	ENSMUSG00000027569	Mrgbp	1600027N09Rik|AW060503|C80444	MRG/MORF4L binding protein	protein-coding	0.080000	0.582090			
ePOU_nocontrol_ChIP_peaks_unique-1893	chr3	53869521	53869721	+	1.33709	NA	Intergenic	Intergenic	-5814	NM_026435	67890	Mm.23067	NM_026435	ENSMUSG00000027746	Ufm1	1810045K17Rik|AI132708|AI463323|Gm10726	ubiquitin-fold modifier 1	protein-coding	0.005000	0.323383			-82(GTTAGAATAACAAATT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-312	chr10	45066949	45067149	+	1.33709	NA	promoter-TSS (NM_011156)	promoter-TSS (NM_011156)	-167	NM_011156	19072	Mm.37294	NM_011156	ENSMUSG00000019849	Prep	AI047692|AI450383|D10Wsu136e|PE|PEP|Pop	prolyl endopeptidase	protein-coding	0.165000	0.771144			
ePOU_nocontrol_ChIP_peaks_unique-2458	chr6	71609169	71609369	+	1.33709	NA	promoter-TSS (NM_001362201)	promoter-TSS (NM_001362201)	-130	NM_001362201	104263	Mm.260479	NM_173001	ENSMUSG00000053470	Kdm3a	1700105C21Rik|C230043E16Rik|JHDM2a|Jmjd1|Jmjd1a|KDM2A|TGSA|Tsga	lysine (K)-specific demethylase 3A	protein-coding	0.000000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-1833	chr2	169910653	169910853	+	1.33709	NA	intron (NM_001363022, intron 2 of 2)	MER58A|DNA|hAT-Charlie	52434	NR_131974	446211	Mm.266854	NR_131974	ENSMUSG00000103935	AY702102	STDP1	cDNA sequence AY702102	ncRNA	0.005000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-2249	chr5	56718536	56718736	+	1.33709	NA	Intergenic	Intergenic	999283	NR_015588	319216	Mm.332387	NR_015588	ENSMUSG00000097216	4932441J04Rik	-	RIKEN cDNA 4932441J04 gene	ncRNA	0.000000	0.283582			
ePOU_nocontrol_ChIP_peaks_unique-1074	chr15	25377122	25377322	+	1.33709	NA	intron (NM_027395, intron 1 of 1)	intron (NM_027395, intron 1 of 1)	36542	NM_027395	70350	Mm.29586	NM_027395	ENSMUSG00000045763	Basp1	2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22	brain abundant, membrane attached signal protein 1	protein-coding	0.010000	0.482587	0(CATGAATTATGCATT,+,0.00),0(CATGAATTATGCATT,-,0.00)	7(TATGCATTTTCATC,+,0.00),7(TATGCATTTTCATC,-,0.00)	
merged_common-82	chr13	95791147	95791347	+	1.33709	NA	intron (NM_027711, intron 2 of 35)	intron (NM_027711, intron 2 of 35)	94327	NM_010170	14064	Mm.440952	NM_010170	ENSMUSG00000021675	F2rl2	F730031A08|PAR3	coagulation factor II (thrombin) receptor-like 2	protein-coding	0.020000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-513	chr11	67922205	67922405	+	1.33709	NA	promoter-TSS (NM_001291049)	promoter-TSS (NM_001291049)	-152	NM_001291049	216835	Mm.158885	NM_173754	ENSMUSG00000020905	Usp43	-	ubiquitin specific peptidase 43	protein-coding	0.100000	0.711443			
ePOU_nocontrol_ChIP_peaks_unique-1759	chr2	119208728	119208928	+	1.33709	NA	promoter-TSS (NM_139139)	promoter-TSS (NM_139139)	-33	NM_139139	69408	Mm.222241	NM_139139	ENSMUSG00000034278	Dnajc17	1700025B16Rik|C87112|D9Bwg1371e	DnaJ heat shock protein family (Hsp40) member C17	protein-coding	0.075000	0.572139			
ePOU_nocontrol_ChIP_peaks_unique-1543	chr19	16140327	16140527	+	1.33709	NA	intron (NM_008139, intron 1 of 6)	intron (NM_008139, intron 1 of 6)	7743	NM_008139	14682	Mm.439701	NM_008139	ENSMUSG00000024639	Gnaq	1110005L02Rik|6230401I02Rik|AA408290|AW060788|Dsk1|Dsk10|Galphaq|Gq|GqI	guanine nucleotide binding protein, alpha q polypeptide	protein-coding	0.005000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-1295	chr16	95485630	95485830	+	1.33709	NA	intron (NM_001302179, intron 2 of 9)	intron (NM_001302179, intron 2 of 9)	-26382	NM_001302154	13876	Mm.164531	NM_133659	ENSMUSG00000040732	Erg	D030036I24Rik	ETS transcription factor	protein-coding	0.010000	0.402985			-80(CTATGCATTACAATGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2667	chr7	128669280	128669480	+	1.33148	NA	intron (NM_178641, intron 8 of 19)	IMPB_01|Satellite|Satellite	-19490	NM_001346517	101490	Mm.490344	NM_178641	ENSMUSG00000042105	Inpp5f	5830435P03Rik|AI115354|AW561896|SAC2|cI-27|hSAC2|mKIAA0966	inositol polyphosphate-5-phosphatase F	protein-coding	0.005000	0.293532			
merged_common-104	chr16	8708169	8708369	+	1.33148	NA	intron (NM_001003918, intron 5 of 30)	intron (NM_001003918, intron 5 of 30)	27499	NM_001324517	436336	Mm.357666	NM_001324517		Gm5767	EG436336|Gm43786	predicted gene 5767	protein-coding	0.005000	0.383085			50(TCTTTGTTATGCTGAA,+,0.00)
merged_common-29	chr10	117070332	117070532	+	1.33148	NA	3' UTR (NM_177798, exon 10 of 10)	3' UTR (NM_177798, exon 10 of 10)	-6580	NM_007636	12461	Mm.247788	NM_007636	ENSMUSG00000034024	Cct2	Cctb	chaperonin containing Tcp1, subunit 2 (beta)	protein-coding	0.000000	0.218905			-10(CATTTATAATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2306	chr5	105678928	105679128	+	1.33148	NA	Intergenic	RLTR13B4|LTR|ERVK	-20941	NM_001122768	231549	Mm.23837	NM_178701	ENSMUSG00000046079	Lrrc8d	2810473G09Rik|4930525N13Rik|A930019F03|Lrrc5	leucine rich repeat containing 8D	protein-coding	0.020000	0.437811	0(CATGAATAATGCAAT,+,0.00),0(CATGAATAATGCAAT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2689	chr8	6527455	6527655	+	1.33148	NA	Intergenic	UCON13|LINE?|Penelope?	-1422268	NM_011388	20494	Mm.3500	NM_011388	ENSMUSG00000023073	Slc10a2	9130221J18Rik|AI605518|ASBT|IBAT|ISBT	solute carrier family 10, member 2	protein-coding	0.005000	0.363184			58(CTTTTCATGAGAAATA,-,0.00)
merged_common-86	chr14	14353480	14353680	+	1.33148	NA	intron (NM_008369, intron 10 of 11)	intron (NM_008369, intron 10 of 11)	7085	NM_008369	16188	Mm.425857	NM_008369	ENSMUSG00000068758	Il3ra	CD123|CDw123|SUT-1	interleukin 3 receptor, alpha chain	protein-coding	0.010000	0.393035			-1(GCTGACTCATGCAAAT,+,0.00),52(GCAATTTTATTCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1270	chr16	73784169	73784369	+	1.33148	NA	Intergenic	Intergenic	557798	NR_030464	751561		NR_030464	ENSMUSG00000104758	Mir691	Mirn691|mir-691|mmu-mir-691	microRNA 691	ncRNA	0.010000	0.333333			-31(TCATTATGATTCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1095	chr15	40652424	40652624	+	1.29334	NA	Intergenic	Intergenic	-2518	NM_011766	22762	Mm.39496	NM_011766	ENSMUSG00000022306	Zfpm2	B330005D23Rik|FOG-2|FOG2	zinc finger protein, multitype 2	protein-coding	0.020000	0.328358	-19(GATGAATAATTCATT,+,0.00),-19(GATGAATAATTCATT,-,0.00)		-9(TCATTTTTAAGTAAAT,+,0.00)
merged_common-69	chr13	11916529	11916729	+	1.21287	NA	intron (NM_023868, intron 3 of 104)	intron (NM_023868, intron 3 of 104)	190316	NM_023868	20191	Mm.239871	NM_023868	ENSMUSG00000021313	Ryr2	9330127I20Rik|RYR-2	ryanodine receptor 2, cardiac	protein-coding	0.000000	0.338308			
merged_common-196	chr5	92128804	92129004	+	1.21287	NA	intron (NM_001359197, intron 1 of 10)	intron (NM_001359197, intron 1 of 10)	8821	NM_001359195	23881	Mm.290530	NM_011816	ENSMUSG00000029405	G3bp2	AA409541|E430034L04Rik|G3BP|mKIAA0660	GTPase activating protein (SH3 domain) binding protein 2	protein-coding	0.020000	0.447761			-73(CCATTCTTATTCAAAC,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2406	chr6	30153109	30153309	+	1.21287	NA	3' UTR (NM_010938, exon 12 of 12)	3' UTR (NM_010938, exon 12 of 12)	12783	NR_029569	387177		NR_029569	ENSMUSG00000076361	Mir182	Mirn182|mir-182|mmu-mir-182	microRNA 182	ncRNA	0.000000	0.343284			17(ATTTGCATATCAATGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2907	chr9	72512445	72512645	+	1.20318	NA	Intergenic	Intergenic	19313	NR_045735	75115	Mm.280755	NR_045735	ENSMUSG00000096986	4930509E16Rik	-	RIKEN cDNA 4930509E16 gene	ncRNA	0.015000	0.412935			7(GAATTGTGATGCAGAT,+,0.00)
merged_common-227	chr8	68645957	68646157	+	1.20318	NA	intron (NM_172753, intron 1 of 9)	intron (NM_172753, intron 1 of 9)	89028	NM_001364256	234356	Mm.334569	NM_172753	ENSMUSG00000036356	Csgalnact1	4732435N03Rik|CSGalNAcT-1	chondroitin sulfate N-acetylgalactosaminyltransferase 1	protein-coding	0.000000	0.407960			-23(TCATTGTTATGTACAA,+,0.00)
merged_common-226	chr8	64193967	64194167	+	1.20318	NA	intron (NM_009390, intron 1 of 20)	intron (NM_009390, intron 1 of 20)	11941	NM_009390	21892	Mm.418367	NM_009390	ENSMUSG00000053626	Tll1	Tll|Tll-1|b2b2476Clo	tolloid-like	protein-coding	0.005000	0.323383			-21(ATCTGCATAAGAATAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-301	chr10	40070388	40070588	+	1.20318	NA	intron (NM_001114332, intron 3 of 5)	intron (NM_001114332, intron 3 of 5)	-45220	NM_144821	215929	Mm.55513	NM_144821	ENSMUSG00000038522	Mfsd4b1	AI317395|AI482555|Naglt1a	major facilitator superfamily domain containing 4B1	protein-coding	0.000000	0.318408			11(ATTTGATTAACAAATA,-,0.00),45(TTTTTGTTATTCAATG,+,0.00)
merged_common-216	chr7	28372669	28372869	+	1.20318	NA	promoter-TSS (NM_001083912)	promoter-TSS (NM_001083912)	-107	NM_001083912	101497	Mm.235700	NM_138752	ENSMUSG00000037552	Plekhg2	AI194308|Clg|Cslg	pleckstrin homology domain containing, family G (with RhoGef domain) member 2	protein-coding	0.060000	0.582090			
merged_common-206	chr6	72686819	72687019	+	1.20318	NA	intron (NM_009332, intron 3 of 11)	intron (NM_009332, intron 3 of 11)	57088	NR_040421	100038714	Mm.321330	NR_040421		Gm15401	-	predicted gene 15401	ncRNA	0.025000	0.432836			23(ATTTTAATAACAAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2040	chr3	156213781	156213981	+	1.20318	NA	Intergenic	Intergenic	237527	NR_040553	329780	Mm.119000	NR_040553	ENSMUSG00000104553	9330178D15Rik	9330178D15	RIKEN cDNA 9330178D15 gene	ncRNA	0.000000	0.293532	11(AATGCATTATTCAAA,+,0.00),11(AATGCATTATTCAAA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1100	chr15	44949820	44950020	+	1.20318	NA	Intergenic	RLTR13B3|LTR|ERVK	68526	NR_033609	239410	Mm.352401	NR_033609	ENSMUSG00000060530	A930017M01Rik	Gm305	Smg-5 homolog, nonsense mediated mRNA decay factor pseudogene	pseudo	0.010000	0.412935	19(CATGAATAATGCAAT,+,0.00),19(CATGAATAATGCAAT,-,0.00)		
merged_common-229	chr8	70539326	70539526	+	1.19758	NA	promoter-TSS (NM_007924)	promoter-TSS (NM_007924)	-249	NM_007924	13716	Mm.271973	NM_007924	ENSMUSG00000070002	Ell	Ell1|Men	elongation factor RNA polymerase II	protein-coding	0.065000	0.582090			
ePOU_nocontrol_ChIP_peaks_unique-1531	chr19	9082476	9082676	+	1.17062	NA	Intergenic	Intergenic	5380	NM_011681	22287	Mm.2258	NM_011681	ENSMUSG00000024653	Scgb1a1	CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg	secretoglobin, family 1A, member 1 (uteroglobin)	protein-coding	0.050000	0.542289			
ePOU_nocontrol_ChIP_peaks_unique-820	chr13	40537011	40537211	+	1.17062	NA	Intergenic	Intergenic	-190697	NR_125899	102633805		NR_125899	ENSMUSG00000097752	Gm26688	Tfap2a-as1	predicted gene, 26688	ncRNA	0.015000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-2353	chr5	135877458	135877658	+	1.17062	NA	Intergenic	Intergenic	-10361	NM_013560	15507	Mm.13849	NM_013560	ENSMUSG00000004951	Hspb1	27kDa|Hsp25	heat shock protein 1	protein-coding	0.020000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-2000	chr3	122279116	122279316	+	1.17062	NA	intron (NM_153806, intron 3 of 6)	RLTR25A|LTR|ERVK	4802	NM_153806	99480	Mm.398647	NM_153806	ENSMUSG00000039756	Dnttip2	4930588M11Rik|AA408582|AU014960|HSU15552	deoxynucleotidyltransferase, terminal, interacting protein 2	protein-coding	0.000000	0.368159		36(TATGAATCTGCATT,+,0.00)	-47(CTATGATCTTGCAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2576	chr7	43465597	43465797	+	1.17062	NA	intron (NM_001368881, intron 4 of 9)	intron (NM_001368881, intron 4 of 9)	2546	NM_001368881	75690	Mm.30200	NM_001290316	ENSMUSG00000070604	Vsig10l	-	V-set and immunoglobulin domain containing 10 like	protein-coding	0.020000	0.552239			
Oct4_nocontrol_ChIP_peaks_unique-29	chr14	22267314	22267514	+	1.17062	NA	intron (NM_028275, intron 2 of 6)	intron (NM_028275, intron 2 of 6)	247702	NM_028275	76633	Mm.489898	NM_028275	ENSMUSG00000063458	Lrmda	1700112E06Rik|2700009F18Rik	leucine rich melanocyte differentiation associated	protein-coding	0.000000	0.268657			
ePOU_nocontrol_ChIP_peaks_unique-2638	chr7	101933843	101934043	+	1.17062	NA	promoter-TSS (NM_001162973)	promoter-TSS (NM_001162973)	-86	NM_001162974	69358	Mm.214841	NM_027053	ENSMUSG00000064307	Lrrc51	1700008D07Rik|Lrtomt	leucine rich repeat containing 51	protein-coding	0.070000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-443	chr11	23666030	23666230	+	1.17062	NA	promoter-TSS (NR_157299)	promoter-TSS (NR_157299)	138	NM_028304	74467	Mm.29536	NM_028304	ENSMUSG00000020280	Pus10	2810013G11Rik|4933435A13Rik|AU014648|C77560|Ccdc139	pseudouridylate synthase 10	protein-coding	0.075000	0.582090			
ePOU_nocontrol_ChIP_peaks_unique-2977	chrX	22719032	22719232	+	1.17062	NA	Intergenic	RMER15-int|LTR|ERVL	257536	NR_033731	76705	Mm.399727	NM_029707		Ppp1r2-ps7	1700023I07Rik	protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 7	pseudo	0.005000	0.457711			-83(TCTTTGTCATTCAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-845	chr13	59585070	59585270	+	1.17062	NA	promoter-TSS (NM_030153)	promoter-TSS (NM_030153)	53	NR_045633	319469	Mm.437992	NR_045633	ENSMUSG00000021557	A230056J06Rik	-	RIKEN cDNA A230056J06 gene	ncRNA	0.075000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-747	chr12	95432603	95432803	+	1.17062	NA	Intergenic	Intergenic	-259523	NM_201518	399558	Mm.341948	NM_201518	ENSMUSG00000047414	Flrt2	-	fibronectin leucine rich transmembrane protein 2	protein-coding	0.000000	0.393035			-1(CCATTGTCTTGTTGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2640	chr7	105752055	105752255	+	1.17062	NA	promoter-TSS (NM_009906)	promoter-TSS (NM_009906)	80	NM_009906	12751	Mm.20837	NM_009906	ENSMUSG00000030894	Tpp1	Cln2|LPIC|TPP-1|TPP-I	tripeptidyl peptidase I	protein-coding	0.010000	0.517413			
ePOU_nocontrol_ChIP_peaks_unique-1794	chr2	137706939	137707139	+	1.17062	NA	Intergenic	Intergenic	-549545	NM_001025431	228662	Mm.153405	NM_145534	ENSMUSG00000062098	Btbd3	mKIAA0952	BTB (POZ) domain containing 3	protein-coding	0.015000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-522	chr11	70668983	70669183	+	1.17062	NA	TTS (NM_001190379)	TTS (NM_001190379)	333	NM_172561	216873	Mm.432524	NM_172561	ENSMUSG00000018287	Spag7	5730443G10|ACRP|FSA-1|Fsa1l	sperm associated antigen 7	protein-coding	0.035000	0.542289			
ePOU_nocontrol_ChIP_peaks_unique-2955	chr9	115699820	115700020	+	1.17062	NA	Intergenic	Lx10|LINE|L1	-209535	NM_028638	73748	Mm.485018	NM_028638	ENSMUSG00000056880	Gadl1	1110027M19Rik|ADC|CSADC	glutamate decarboxylase-like 1	protein-coding	0.010000	0.388060		-53(TATGTATAAGCATA,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1302	chr17	3869735	3869935	+	1.17062	NA	Intergenic	Intergenic	-173574	NM_198958	224480	Mm.328756	NM_198958	ENSMUSG00000023802	Nox3	GP91-3|het|nmf250	NADPH oxidase 3	protein-coding	0.015000	0.318408			
ePOU_nocontrol_ChIP_peaks_unique-209	chr1	180315406	180315606	+	1.17062	NA	Intergenic	Charlie29a|DNA|hAT-Charlie	-14970	NM_001081175	320404	Mm.132535	NM_001081175	ENSMUSG00000038855	Itpkb	1110033J02Rik|E130307H12Rik	inositol 1,4,5-trisphosphate 3-kinase B	protein-coding	0.015000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-1500	chr18	76110862	76111062	+	1.17062	NA	intron (NM_001357506, intron 1 of 2)	intron (NM_001357506, intron 1 of 2)	-12491	NR_045365	73009	Mm.443541	NR_045365	ENSMUSG00000117797	2900057B20Rik	-	RIKEN cDNA 2900057B20 gene	ncRNA	0.030000	0.616915			
ePOU_nocontrol_ChIP_peaks_unique-1556	chr19	24252242	24252442	+	1.17062	NA	Intergenic	B3|SINE|B2	-27214	NM_011597	21873	Mm.104744	NM_011597	ENSMUSG00000024812	Tjp2	ZO-2	tight junction protein 2	protein-coding	0.020000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-177	chr1	162548403	162548603	+	1.17062	NA	promoter-TSS (NM_144877)	promoter-TSS (NM_144877)	-158	NM_144877	71449	Mm.270569	NM_144877	ENSMUSG00000026694	Eef1aknmt	5630401D24Rik|Mettl13	EEF1A lysine and N-terminal methyltransferase	protein-coding	0.100000	0.661692			
ePOU_nocontrol_ChIP_peaks_unique-1451	chr18	38533417	38533617	+	1.17062	NA	Intergenic	L1M5|LINE|L1	67830	NM_011898	24066	Mm.42038	NM_011898	ENSMUSG00000024427	Spry4	A030006O18Rik|sprouty4	sprouty RTK signaling antagonist 4	protein-coding	0.005000	0.343284			
Oct4_nocontrol_ChIP_peaks_unique-97	chr8	82591130	82591330	+	1.17062	NA	Intergenic	Intergenic	182915	NM_001368343	30932	Mm.269248	NM_145600	ENSMUSG00000031711	Zfp330	BC008086|Noa36|Znf330	zinc finger protein 330	protein-coding	0.000000	0.283582			-9(TTATTCTTATGCTAAA,+,0.00),69(ATATTGTATTTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-380	chr10	101140310	101140510	+	1.17062	NA	Intergenic	Intergenic	-398775	NR_152765	102639396	Mm.404529	NR_152765		Gm35722	-	predicted gene, 35722	ncRNA	0.010000	0.303483		61(CATCCATATGCATA,+,0.00),61(CATCCATATGCATA,-,0.00)	66(ATATGCATATCAATAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2555	chr7	24133925	24134125	+	1.17062	NA	intron (NR_153441, intron 1 of 3)	intron (NR_153441, intron 1 of 3)	1653	NM_019941	56525	Mm.295595	NM_019941	ENSMUSG00000047603	Zfp235	0610030O19Rik|AI428448	zinc finger protein 235	protein-coding	0.035000	0.442786			-58(ATTTCAAAAATAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-698	chr12	69888459	69888659	+	1.17062	NA	intron (NM_201519, intron 1 of 30)	intron (NM_201519, intron 1 of 30)	-4546	NM_178628	73991	Mm.474462	NM_178628	ENSMUSG00000021066	Atl1	4930435M24Rik|Adfsp|Fsp1|Spg3|Spg3a	atlastin GTPase 1	protein-coding	0.005000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-848	chr13	63915651	63915851	+	1.17062	NA	Intergenic	Intergenic	100511	NM_001013608	76251	Mm.186610	NM_023507	ENSMUSG00000021470	Ercc6l2	0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278	excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2	protein-coding	0.000000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-2333	chr5	122050060	122050260	+	1.17062	NA	promoter-TSS (NM_001312908)	promoter-TSS (NM_001312908)	-309	NM_001312908	13048	Mm.156172	NM_007804	ENSMUSG00000042589	Cux2	1700051K22Rik|Cutl2|Cux-2	cut-like homeobox 2	protein-coding	0.145000	0.776119			
ePOU_nocontrol_ChIP_peaks_unique-2156	chr4	128711550	128711750	+	1.17062	NA	intron (NM_001195130, intron 6 of 14)	intron (NM_001195130, intron 6 of 14)	-15921	NM_001195083	54383	Mm.473738	NM_018774	ENSMUSG00000028796	Phc2	A3galt2|AA415044|D130050K19Rik|D4Ertd810e|Edr2|Mph2|p36	polyhomeotic 2	protein-coding	0.040000	0.547264			
ePOU_nocontrol_ChIP_peaks_unique-1236	chr16	38073967	38074167	+	1.17062	NA	Intergenic	Intergenic	-14934	NM_001347232	56637	Mm.394930	NM_019827	ENSMUSG00000022812	Gsk3b	7330414F15Rik|8430431H08Rik|C86142|GSK-3|GSK-3beta|GSK3	glycogen synthase kinase 3 beta	protein-coding	0.000000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-2464	chr6	81223716	81223916	+	1.17062	NA	Intergenic	Intergenic	671847	NR_106091	102465711		NR_106091	ENSMUSG00000106154	Mir7232	mmu-mir-7232	microRNA 7232	ncRNA	0.000000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-1128	chr15	73061116	73061316	+	1.17062	NA	promoter-TSS (NM_001164641)	promoter-TSS (NM_001164641)	-12	NM_001164643	76510	Mm.158902	NM_029640	ENSMUSG00000047921	Trappc9	1810044A24Rik|2900005P22Rik|4632408O18Rik|Ibp|Nibp|TRS130|mKIAA1882	trafficking protein particle complex 9	protein-coding	0.035000	0.601990			
ePOU_nocontrol_ChIP_peaks_unique-837	chr13	53109648	53109848	+	1.17062	NA	3' UTR (NM_013846, exon 9 of 9)	3' UTR (NM_013846, exon 9 of 9)	-128709	NM_017373	18030	Mm.136604	NM_017373	ENSMUSG00000056749	Nfil3	AV225605|E4BP4	nuclear factor, interleukin 3, regulated	protein-coding	0.045000	0.601990			
Oct4_nocontrol_ChIP_peaks_unique-17	chr10	91962671	91962871	+	1.17062	NA	Intergenic	L3|LINE|CR1	73942	NR_152729	102633867	Mm.351514	NR_152729	ENSMUSG00000111657	Gm31592	-	predicted gene, 31592	ncRNA	0.005000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-2246	chr5	51900226	51900426	+	1.17062	NA	Intergenic	Intergenic	235691	NR_105845	102466648		NR_105845	ENSMUSG00000098726	Mir6417	Gm27334|mmu-mir-6417	microRNA 6417	ncRNA	0.010000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-2073	chr4	41542331	41542531	+	1.17062	NA	intron (NM_027993, intron 1 of 5)	intron (NM_027993, intron 1 of 5)	24994	NR_045726	76992	Mm.440546	NR_045726	ENSMUSG00000036162	Fam219aos	1700066J24Rik	family with sequence similarity 219, member A, opposite strand	ncRNA	0.035000	0.447761			
ePOU_nocontrol_ChIP_peaks_unique-2967	chr9	122294562	122294762	+	1.17062	NA	promoter-TSS (NM_001271873)	promoter-TSS (NM_001271873)	-239	NM_133979	102566	Mm.87676	NM_133979	ENSMUSG00000037949	Ano10	AI604832|Tmem16k	anoctamin 10	protein-coding	0.050000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-30	chr1	30873727	30873927	+	1.17062	NA	Intergenic	CpG	-10571	NM_001081080	213109	Mm.194486	NM_025871	ENSMUSG00000048874	Phf3	2310061N19Rik	PHD finger protein 3	protein-coding	0.150000	0.761194			
Oct4_nocontrol_ChIP_peaks_unique-83	chr6	118455199	118455399	+	1.17062	NA	intron (NM_001361901, intron 1 of 5)	CpG	207	NM_001361901	72720	Mm.212572	NM_028335	ENSMUSG00000030145	Zfp248	2810037F07Rik|E130106N01Rik	zinc finger protein 248	protein-coding	0.070000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-1066	chr15	13062051	13062251	+	1.17062	NA	intron (NM_007666, intron 3 of 11)	intron (NM_007666, intron 3 of 11)	111524	NM_007666	12563	Mm.57048	NM_007666	ENSMUSG00000039385	Cdh6	cad6	cadherin 6	protein-coding	0.010000	0.457711			60(ATTTGCATTAATATAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1872	chr3	37962912	37963112	+	1.17062	NA	intron (NR_040559, intron 2 of 3)	intron (NR_040559, intron 2 of 3)	64199	NR_040559	626410	Mm.389417	NR_040559	ENSMUSG00000106461	Gm20755	-	predicted gene, 20755	ncRNA	0.025000	0.487562	-90(CATGAATAATGCAAA,+,0.00),-90(CATGAATAATGCAAA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2861	chr9	40730870	40731070	+	1.17062	NA	intron (NM_133733, intron 1 of 6)	intron (NM_133733, intron 1 of 6)	44951	NM_133733	71566	Mm.280560	NM_133733	ENSMUSG00000032024	Clmp	9030425E11Rik|ACAM|ASP5|AW557819	CXADR-like membrane protein	protein-coding	0.040000	0.616915			-9(TCTTTGCCTTGCAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-479	chr11	49819054	49819254	+	1.17062	NA	exon (NM_013529, exon 9 of 19)	exon (NM_013529, exon 9 of 19)	24999	NM_013529	14584	Mm.24402	NM_013529	ENSMUSG00000020363	Gfpt2	AI480523|GFAT2	glutamine fructose-6-phosphate transaminase 2	protein-coding	0.030000	0.462687			-64(CACGTGTTATGCAAAT,+,0.00),6(ATCTGCAAGACTAGGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1342	chr17	30096302	30096502	+	1.17062	NA	intron (NM_001356265, intron 2 of 5)	RLTR13D5|LTR|ERVK	91363	NM_148926	21769	Mm.220972	NM_148926	ENSMUSG00000044477	Zfand3	AW539211|TEG-27|Tex27	zinc finger, AN1-type domain 3	protein-coding	0.005000	0.353234	-88(CATGAATAATGCAAC,+,0.00),-88(CATGAATAATGCAAC,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1364	chr17	49428252	49428452	+	1.17062	NA	promoter-TSS (NM_028464)	promoter-TSS (NM_028464)	-12	NM_020042	56738	Mm.22256	NM_020042	ENSMUSG00000064120	Mocs1	3110045D15Rik|AI043170|AW536397	molybdenum cofactor synthesis 1	protein-coding	0.075000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-1205	chr16	25585009	25585209	+	1.17062	NA	Intergenic	Intergenic	-98656	NM_001127261	22061	Mm.20894	NM_011641	ENSMUSG00000022510	Trp63	AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1	transformation related protein 63	protein-coding	0.020000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-979	chr14	60771288	60771488	+	1.17062	NA	intron (NM_183175, intron 1 of 3)	L1MB2|LINE|L1	3254	NM_183175	239126	Mm.319636	NM_183175	ENSMUSG00000071347	C1qtnf9	9130217G22Rik|Adif1|CTRP9|Ciqtnf9	C1q and tumor necrosis factor related protein 9	protein-coding	0.015000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-2437	chr6	53201200	53201400	+	1.17062	NA	Intergenic	Intergenic	-19864	NR_073371	231989	Mm.372520	NR_073371	ENSMUSG00000107935	Gm4872	D430007I03	predicted gene 4872	ncRNA	0.020000	0.532338			
ePOU_nocontrol_ChIP_peaks_unique-141	chr1	133168733	133168933	+	1.17062	NA	Intergenic	Intergenic	37667	NM_133819	108954	Mm.293628	NM_133819	ENSMUSG00000046062	Ppp1r15b	1810033K10Rik|AI606441|C530022L24Rik|CReP	protein phosphatase 1, regulatory subunit 15B	protein-coding	0.020000	0.542289		6(AATGAATATGCAAA,+,0.00),6(AATGAATATGCAAA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1528	chr19	7341618	7341818	+	1.17062	NA	5' UTR (NM_007928, exon 1 of 18)	5' UTR (NM_007928, exon 1 of 18)	142	NM_001080388	13728	Mm.258986	NM_007928	ENSMUSG00000024969	Mark2	EMK-1|Emk|Par-1|Par-1b	MAP/microtubule affinity regulating kinase 2	protein-coding	0.100000	0.592040			
ePOU_nocontrol_ChIP_peaks_unique-1977	chr3	106685492	106685692	+	1.17062	NA	intron (NM_001039478, intron 1 of 2)	L1MB7|LINE|L1	605	NM_001039478	321000	Mm.259638	NM_028081	ENSMUSG00000056260	Lrif1	2010012G17Rik|4933421E11Rik|AI450568	ligand dependent nuclear receptor interacting factor 1	protein-coding	0.000000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-1929	chr3	79218822	79219022	+	1.17062	NA	intron (NR_045502, intron 1 of 2)	intron (NR_045502, intron 1 of 2)	6003	NR_045502	70924	Mm.444622	NR_045502	ENSMUSG00000104585	4921511C10Rik	-	RIKEN cDNA 4921511C10 gene	ncRNA	0.005000	0.492537			
ePOU_nocontrol_ChIP_peaks_unique-1860	chr3	27435437	27435637	+	1.17062	NA	intron (NM_001356953, intron 24 of 26)	intron (NM_001356953, intron 24 of 26)	64186	NM_177330	208188	Mm.194721	NM_177330	ENSMUSG00000051136	Ghsr	C530020I22Rik|GHRP|GHS-R|Ghsr1a	growth hormone secretagogue receptor	protein-coding	0.005000	0.363184			
Oct4_nocontrol_ChIP_peaks_unique-27	chr13	86046528	86046728	+	1.17062	NA	exon (NM_007749, exon 1 of 3)	exon (NM_007749, exon 1 of 3)	167	NM_007749	12867	Mm.378898	NM_007749	ENSMUSG00000017778	Cox7c	COXVIIc|Cox7c1	cytochrome c oxidase subunit 7C	protein-coding	0.085000	0.656716			
ePOU_nocontrol_ChIP_peaks_unique-1007	chr14	75015941	75016141	+	1.17062	NA	promoter-TSS (NM_198642)	promoter-TSS (NM_198642)	14	NM_198642	271221	Mm.320280	NM_198642	ENSMUSG00000034959	Rubcnl	5031414D18Rik|Gm744|Gm911|Kiaa0226l	RUN and cysteine rich domain containing beclin 1 interacting protein like	protein-coding	0.060000	0.552239			
ePOU_nocontrol_ChIP_peaks_unique-114	chr1	97622748	97622948	+	1.17062	NA	Intergenic	Intergenic	38828	NM_001355074	52392	Mm.12309	NM_133825	ENSMUSG00000044768	D1Ertd622e	AI987691|AW047450	DNA segment, Chr 1, ERATO Doi 622, expressed	protein-coding	0.015000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-2167	chr4	136285558	136285758	+	1.17062	NA	promoter-TSS (NM_009557)	promoter-TSS (NM_009557)	-409	NM_009557	22704	Mm.1504	NM_009557	ENSMUSG00000051351	Zfp46	AI426962|Mlz-4|Zfp-46|Znf436	zinc finger protein 46	protein-coding	0.040000	0.567164			
ePOU_nocontrol_ChIP_peaks_unique-1618	chr2	5431357	5431557	+	1.17062	NA	intron (NR_030601, intron 1 of 1)	intron (NR_030601, intron 1 of 1)	52067	NR_030601	100124465		NR_030601	ENSMUSG00000078031	Mir466d	Mirn466d	microRNA 466d	ncRNA	0.000000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-732	chr12	81868188	81868388	+	1.17062	NA	intron (NM_018814, intron 1 of 35)	intron (NM_018814, intron 1 of 35)	8258	NM_018814	54604	Mm.86584	NM_018814	ENSMUSG00000021140	Pcnx	2900024E21Rik|3526401J03Rik|AF096286|AI327143|AI413187|Pcnx1|Pcnxl1	pecanex homolog	protein-coding	0.020000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-335	chr10	68157081	68157281	+	1.17062	NA	intron (NM_023598, intron 4 of 9)	intron (NM_023598, intron 4 of 9)	121545	NM_023598	71371	Mm.440357	NM_023598	ENSMUSG00000019947	Arid5b	4930580B11|5430435G07Rik|AI467247|Desrt|Mrf2|Mrf2alpha|Mrf2beta	AT rich interactive domain 5B (MRF1-like)	protein-coding	0.015000	0.472637			
ePOU_nocontrol_ChIP_peaks_unique-427	chr11	16607906	16608106	+	1.17062	NA	Intergenic	RLTR13D6|LTR|ERVK	-99522	NM_011343	20335	Mm.325350	NM_011343	ENSMUSG00000078974	Sec61g	-	SEC61, gamma subunit	protein-coding	0.000000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-777	chr12	119254675	119254875	+	1.17062	NA	Intergenic	RLTR13B3|LTR|ERVK	-16499	NM_177290	320910	Mm.217000	NM_177290	ENSMUSG00000025321	Itgb8	4832412O06Rik	integrin beta 8	protein-coding	0.005000	0.407960	-13(ATTGCATTATTCATG,+,0.00),-13(ATTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2423	chr6	43632804	43633004	+	1.17062	NA	intron (NM_001311111, intron 2 of 7)	intron (NM_001311111, intron 2 of 7)	33374	NM_013861	29807	Mm.320979	NM_013861	ENSMUSG00000029735	Tpk1	-	thiamine pyrophosphokinase	protein-coding	0.000000	0.343284			-54(CTATTGATATACAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1092	chr15	39198554	39198754	+	1.17062	NA	intron (NM_001256382, intron 1 of 26)	CpG-4870	368	NM_001256383	116838	Mm.309296	NM_053271	ENSMUSG00000037386	Rims2	2810036I15Rik|AW048769|RIM2|Rab3ip2|Rim2(+40A)|Rim2(+44A)|Rim2(+4A)|Serg2|Syt3-rs|mKIAA0751	regulating synaptic membrane exocytosis 2	protein-coding	0.150000	0.791045			
Oct4_nocontrol_ChIP_peaks_unique-85	chr7	28290809	28291009	+	1.17062	NA	exon (NM_175033, exon 1 of 6)	exon (NM_175033, exon 1 of 6)	277	NM_175033	280621	Mm.212777	NM_175033	ENSMUSG00000046750	Selenov	Selv	selenoprotein V	protein-coding	0.065000	0.661692			
ePOU_nocontrol_ChIP_peaks_unique-2120	chr4	89300600	89300800	+	1.17062	NA	intron (NR_132431, intron 2 of 9)	intron (NR_132431, intron 2 of 9)	5520	NR_132431	102633081	Mm.409388	NR_132431		Gm12610	ANRIL|Gm12609	predicted gene 12610	ncRNA	0.020000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-146	chr1	134405788	134405988	+	1.17062	NA	non-coding (NR_149307, exon 1 of 9)	non-coding (NR_149307, exon 1 of 9)	107	NR_149307	72017	Mm.280230	NM_028057	ENSMUSG00000026456	Cyb5r1	1500005G05Rik|B5R.1|C80155|Nqo3a2	cytochrome b5 reductase 1	protein-coding	0.060000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-137	chr1	131458274	131458474	+	1.17062	NA	intron (NM_001081011, intron 2 of 22)	intron (NM_001081011, intron 2 of 22)	68987	NM_001081011	14270	Mm.276259	NM_019520	ENSMUSG00000026425	Srgap2	9930124L22Rik|AI448945|FBP2|Fnbp2|srGAP3	SLIT-ROBO Rho GTPase activating protein 2	protein-coding	0.000000	0.338308	-30(GCTGAATTATGCATG,+,0.00),-30(GCTGAATTATGCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2103	chr4	72168144	72168344	+	1.17062	NA	intron (NM_001285531, intron 6 of 6)	intron (NM_001285531, intron 6 of 6)	32649	NM_011599	21885	Mm.278444	NM_011599	ENSMUSG00000008305	Tle1	C230057C06Rik|Estm14|Grg-1|Grg1|Tle4l	transducin-like enhancer of split 1	protein-coding	0.005000	0.383085			-34(ATTATCATTACAAAGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-801	chr13	21506256	21506456	+	1.17062	NA	intron (NR_026798, intron 1 of 1)	intron (NR_026798, intron 1 of 1)	168	NR_026798	100038371	Mm.133328	NR_026798		Zfp389	-	zinc finger protein 389	pseudo	0.070000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-2665	chr7	127876605	127876805	+	1.17062	NA	promoter-TSS (NM_172749)	promoter-TSS (NM_172749)	131	NM_001362189	244219	Mm.207872	NM_146259	ENSMUSG00000049728	Zfp668	BC030314|E130018B19Rik|Znf668	zinc finger protein 668	protein-coding	0.085000	0.626866			
ePOU_nocontrol_ChIP_peaks_unique-1896	chr3	55887801	55888001	+	1.17062	NA	promoter-TSS (NR_162798)	promoter-TSS (NR_162798)	-562	NR_162798	114482873		NR_162798		Mir12194	mmu-mir-12194	microRNA mir-12194	ncRNA	0.005000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-2031	chr3	152192299	152192499	+	1.17062	NA	intron (NM_001356364, intron 1 of 2)	intron (NM_001356364, intron 1 of 2)	1446	NM_025926	67035	Mm.46746	NM_025926	ENSMUSG00000028035	Dnajb4	1700029A20Rik|2010306G19Rik|5730460G06Rik	DnaJ heat shock protein family (Hsp40) member B4	protein-coding	0.020000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-1473	chr18	58509913	58510113	+	1.17062	NA	Intergenic	Intergenic	-46227	NM_001081072	225579	Mm.258517	NM_001081072	ENSMUSG00000024600	Slc27a6	4732438L20Rik|FACVL2|FATP6|VLCS-H1	solute carrier family 27 (fatty acid transporter), member 6	protein-coding	0.020000	0.288557			
ePOU_nocontrol_ChIP_peaks_unique-2747	chr8	69891820	69892020	+	1.17062	NA	intron (NM_001353930, intron 1 of 5)	intron (NM_001353930, intron 1 of 5)	2063	NM_001353930	234365	Mm.252521	NM_001353930		Yjefn3	Gm175|YjeF_N3|hYjeF_N3	YjeF N-terminal domain containing 3	protein-coding	0.005000	0.422886	-56(ATTACATAATTCATG,+,0.00),-56(ATTACATAATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-193	chr1	171470357	171470557	+	1.17062	NA	Intergenic	Intergenic	32896	NM_172647	16456	Mm.294882	NM_172647	ENSMUSG00000038235	F11r	9130004G24|AA638916|ESTM33|JAM|JAM-1|JAM-A|Jcam|Jcam1|Ly106	F11 receptor	protein-coding	0.025000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-560	chr11	88391766	88391966	+	1.17062	NA	intron (NM_054043, intron 9 of 13)	intron (NM_054043, intron 9 of 13)	39093	NR_039545	100628571		NR_039545	ENSMUSG00000092985	Mir378b	mir-378b|mmu-mir-378b	microRNA 378b	ncRNA	0.005000	0.447761			
ePOU_nocontrol_ChIP_peaks_unique-2515	chr6	122391973	122392173	+	1.17062	NA	non-coding (NR_152109, exon 2 of 2)	non-coding (NR_152109, exon 2 of 2)	694	NR_152109	74269	Mm.81022	NR_152109	ENSMUSG00000040657	1700063H04Rik	-	RIKEN cDNA 1700063H04 gene	ncRNA	0.040000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-2400	chr6	24405828	24406028	+	1.17062	NA	Intergenic	Intergenic	109139	NM_172535	214704	Mm.61131	NM_172535	ENSMUSG00000046192	Iqub	4932408B21Rik|Trs4	IQ motif and ubiquitin domain containing	protein-coding	0.000000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-12	chr1	15720298	15720498	+	1.17062	NA	3' UTR (NM_001098528, exon 3 of 3)	3' UTR (NM_001098528, exon 3 of 3)	-85248	NM_001286628	21749	Mm.4306	NM_009352	ENSMUSG00000025925	Terf1	Pin2|Trbf1|Trf1	telomeric repeat binding factor 1	protein-coding	0.000000	0.273632			-37(CTATTATAATGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1070	chr15	22911986	22912186	+	1.17062	NA	Intergenic	Intergenic	-124377	NM_001081299	320865	Mm.241965	NM_001081299	ENSMUSG00000040420	Cdh18	B230220E17Rik|Cdh14l|Tg(GFAP-APOE_i4)1Hol	cadherin 18	protein-coding	0.010000	0.378109			-69(ATCAGCATAACAAGAC,-,0.00),-15(ATTTGAATAACACTAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1052	chr15	3962840	3963040	+	1.17062	NA	TTS (NM_134099)	TTS (NM_134099)	16633	NM_134099	106052	Mm.234191	NM_134099	ENSMUSG00000022184	Fbxo4	1700096C12Rik|AI851261|AW494535|Fbx4	F-box protein 4	protein-coding	0.000000	0.432836	-36(ATTGCATTATTCATG,+,0.00),-36(ATTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-580	chr11	99230675	99230875	+	1.17062	NA	5' UTR (NM_020618, exon 1 of 11)	5' UTR (NM_020618, exon 1 of 11)	242	NM_020618	57376	Mm.379086	NM_020618	ENSMUSG00000037935	Smarce1	2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	protein-coding	0.135000	0.756219			
ePOU_nocontrol_ChIP_peaks_unique-58	chr1	57244059	57244259	+	1.17062	NA	Intergenic	Intergenic	-29163	NR_037990	407809	Mm.134505	NR_037990	ENSMUSG00000101429	BC055402	-	cDNA sequence BC055402	ncRNA	0.000000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-2521	chr6	129180556	129180756	+	1.17062	NA	promoter-TSS (NM_053109)	promoter-TSS (NM_053109)	41	NM_053109	93694	Mm.197536	NM_053109	ENSMUSG00000030157	Clec2d	Clr-b|Clrb|Ocil	C-type lectin domain family 2, member d	protein-coding	0.010000	0.477612			
ePOU_nocontrol_ChIP_peaks_unique-353	chr10	80855099	80855299	+	1.17062	NA	promoter-TSS (NM_175195)	promoter-TSS (NM_175195)	10	NM_025349	66094	Mm.379101	NM_025349	ENSMUSG00000035215	Lsm7	0910001B06Rik|1110033F18Rik	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated	protein-coding	0.125000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-2860	chr9	36857803	36858003	+	1.17062	NA	intron (NM_001357613, intron 3 of 9)	intron (NM_001357613, intron 3 of 9)	24329	NM_001357611	235180	Mm.5264	NM_183171	ENSMUSG00000032118	Fez1	UNC-76|UNC76	fasciculation and elongation protein zeta 1 (zygin I)	protein-coding	0.010000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-2959	chr9	119315556	119315756	+	1.17062	NA	intron (NR_045693, intron 1 of 18)	intron (NR_045693, intron 1 of 18)	6771	NR_045693	108737	Mm.293565	NM_133985	ENSMUSG00000036737	Oxsr1	2210022N24Rik|2810422B09Rik|AI462649|AW209236|Osr1|mKIAA1101	oxidative-stress responsive 1	protein-coding	0.000000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-2236	chr5	42959679	42959879	+	1.17062	NA	Intergenic	Intergenic	-273474	NM_175937	231207	Mm.7233	NM_175937	ENSMUSG00000039782	Cpeb2	A630055H10Rik|Cpe-bp2	cytoplasmic polyadenylation element binding protein 2	protein-coding	0.015000	0.447761			
ePOU_nocontrol_ChIP_peaks_unique-187	chr1	170101614	170101814	+	1.17062	NA	Intergenic	RSINE1|SINE|B4	-12770	NM_022563	18214	Mm.229249	NM_022563	ENSMUSG00000026674	Ddr2	AW495251|Ntrkr3|tyro10	discoidin domain receptor family, member 2	protein-coding	0.010000	0.427861			47(CAATAGCCATGCAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2642	chr7	110190672	110190872	+	1.17062	NA	Intergenic	Intergenic	-30931	NM_009302	20947	Mm.334144	NM_009302	ENSMUSG00000031015	Swap70	70kDa|AV235546	SWA-70 protein	protein-coding	0.005000	0.422886			-52(TTTTTTTTTTGCTTAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-673	chr12	36612709	36612909	+	1.17062	NA	intron (NM_178629, intron 9 of 9)	MIR|SINE|MIR	197193	NR_037309	100499526		NR_037309	ENSMUSG00000092917	Mir3472	mmu-mir-3472	microRNA 3472	ncRNA	0.005000	0.318408			46(GCATTGTTATGAAAAT,+,0.00)
merged_common-126	chr18	58324651	58324851	+	1.17062	NA	Intergenic	Intergenic	-114825	NM_010181	14119	Mm.20271	NM_010181	ENSMUSG00000024598	Fbn2	BC063774|Fib-2|mKIAA4226|sne|sy	fibrillin 2	protein-coding	0.010000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-567	chr11	94937062	94937262	+	1.17062	NA	intron (NM_007742, intron 1 of 50)	intron (NM_007742, intron 1 of 50)	938	NM_007742	12842	Mm.277735	NM_007742	ENSMUSG00000001506	Col1a1	Col1a-1|Cola-1|Cola1|Mov-13|Mov13	collagen, type I, alpha 1	protein-coding	0.030000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-341	chr10	76260999	76261199	+	1.17062	NA	3' UTR (NM_009115, exon 3 of 3)	3' UTR (NM_009115, exon 3 of 3)	7263	NM_009115	20203	Mm.235998	NM_009115	ENSMUSG00000033208	S100b	AI850290|Bpb	S100 protein, beta polypeptide, neural	protein-coding	0.015000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-601	chr11	107479414	107479614	+	1.17062	NA	promoter-TSS (NM_025894)	promoter-TSS (NM_025894)	-14	NM_025894	66997	Mm.491171	NM_025894	ENSMUSG00000020720	Psmd12	1500002F15Rik|AI480719|P55	proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	protein-coding	0.090000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-2452	chr6	64355797	64355997	+	1.17062	NA	intron (NM_001370966, intron 11 of 15)	intron (NM_001370966, intron 11 of 15)	-373228	NM_007500	11921	Mm.57229	NM_007500	ENSMUSG00000073043	Atoh1	Hath1|MATH-1|Math1|bHLHa14	atonal bHLH transcription factor 1	protein-coding	0.005000	0.303483	56(CATGAATTATTTATG,+,0.00),56(CATGAATTATTTATG,-,0.00)		
Oct4_nocontrol_ChIP_peaks_unique-40	chr16	6965018	6965218	+	1.17062	NA	intron (NM_001359725, intron 5 of 16)	intron (NM_001359725, intron 5 of 16)	-74252	NM_001359729	268859	Mm.370334	NM_021477	ENSMUSG00000008658	Rbfox1	A2bp|A2bp1|Hrnbp1|fox-1	RNA binding protein, fox-1 homolog (C. elegans) 1	protein-coding	0.005000	0.477612			48(ATTTGACAGGCAAAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2817	chr8	125500044	125500244	+	1.17062	NA	intron (NM_001357372, intron 2 of 21)	intron (NM_001357372, intron 2 of 21)	-7311	NM_001081337	244668	Mm.271668	NM_001081337	ENSMUSG00000001995	Sipa1l2	BC058408|mKIAA1389	signal-induced proliferation-associated 1 like 2	protein-coding	0.020000	0.412935			43(ATTTCCATTATAAATC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-487	chr11	54953961	54954161	+	1.17062	NA	intron (NM_001271455, intron 1 of 17)	intron (NM_001271455, intron 1 of 17)	8879	NM_001199275	57783	Mm.259671	NM_021327	ENSMUSG00000020400	Tnip1	ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN	TNFAIP3 interacting protein 1	protein-coding	0.015000	0.447761			
ePOU_nocontrol_ChIP_peaks_unique-585	chr11	101772571	101772771	+	1.17062	NA	intron (NM_008815, intron 8 of 12)	intron (NM_008815, intron 8 of 12)	12639	NM_001316366	18612	Mm.5025	NM_008815	ENSMUSG00000017724	Etv4	AW414408|Pea-3|Pea3	ets variant 4	protein-coding	0.035000	0.567164			
ePOU_nocontrol_ChIP_peaks_unique-1909	chr3	65456301	65456501	+	1.17062	NA	Intergenic	Intergenic	-63848	NM_026155	67437	Mm.232728	NM_026155	ENSMUSG00000027828	Ssr3	0610038P07Rik|AL022999|AU022074|AW553833|TRAPG	signal sequence receptor, gamma	protein-coding	0.010000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-207	chr1	179506825	179507025	+	1.17062	NA	intron (NM_027188, intron 1 of 11)	(TTTA)n|Simple_repeat|Simple_repeat	11116	NM_027188	69726	Mm.222338	NM_027188	ENSMUSG00000055067	Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding	0.010000	0.328358			
ePOU_nocontrol_ChIP_peaks_unique-892	chr13	103774316	103774516	+	1.17062	NA	exon (NM_001361085, exon 1 of 12)	exon (NM_001361085, exon 1 of 12)	192	NM_001361085	218543	Mm.458176	NM_172592	ENSMUSG00000032621	Srek1	8430401B01|AI450757|AI462342|SRrp508|SRrp86|Sfrs12|Srsf12	splicing regulatory glutamine/lysine-rich protein 1	protein-coding	0.115000	0.631841			
ePOU_nocontrol_ChIP_peaks_unique-950	chr14	34310518	34310718	+	1.17062	NA	promoter-TSS (NM_008133)	promoter-TSS (NM_008133)	-101	NM_001360074	75698	Mm.45406	NM_029389	ENSMUSG00000041471	Shld2	3110001K24Rik|Fam35a	shieldin complex subunit 2	protein-coding	0.170000	0.825871			
ePOU_nocontrol_ChIP_peaks_unique-662	chr12	32976760	32976960	+	1.17062	NA	3' UTR (NM_013635, exon 6 of 6)	3' UTR (NM_013635, exon 6 of 6)	22674	NM_198710	19027	Mm.246304	NM_013635	ENSMUSG00000020570	Sypl	AI314763|AI604763|D12Ertd446e|PanI|Pphn|Sypl1	synaptophysin-like protein	protein-coding	0.005000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-2697	chr8	22259891	22260091	+	1.17062	NA	3' UTR (NM_001205253, exon 4 of 4)	3' UTR (NM_001205253, exon 4 of 4)	-23450	NM_199257	234129	Mm.450553	NM_181851	ENSMUSG00000031481	Tpte	Pten2	transmembrane phosphatase with tensin homology	protein-coding	0.010000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-1992	chr3	118277962	118278162	+	1.17062	NA	Intergenic	Intergenic	-155795	NR_029551	387155		NR_029551	ENSMUSG00000065569	Mir137	Mirn137|mir-137|mmu-mir-137	microRNA 137	ncRNA	0.000000	0.343284	72(ATTGAATTATTCATG,+,0.00),72(ATTGAATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1204	chr16	24919398	24919598	+	1.17062	NA	intron (NM_178665, intron 10 of 12)	intron (NM_178665, intron 10 of 12)	-140141	NR_040374	319487	Mm.137341	NR_040374	ENSMUSG00000096960	A230028O05Rik	-	RIKEN cDNA A230028O05 gene	ncRNA	0.030000	0.417910		-24(TATGCAGATGCATT,+,0.00),-24(TATGCAGATGCATT,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1874	chr3	40950629	40950829	+	1.17062	NA	promoter-TSS (NM_001040399)	promoter-TSS (NM_001040399)	-57	NM_001368222	214048	Mm.46782	NM_027663	ENSMUSG00000025762	Larp1b	1700108L22Rik|4933421B21Rik|AA690246|Larp2	La ribonucleoprotein domain family, member 1B	protein-coding	0.085000	0.631841			
ePOU_nocontrol_ChIP_peaks_unique-1401	chr17	85138085	85138285	+	1.17062	NA	intron (NM_028576, intron 3 of 10)	intron (NM_028576, intron 3 of 10)	47559	NM_028576	73582	Mm.260753	NM_028576	ENSMUSG00000071037	Camkmt	1700106N22Rik|AI480743|AV099781|CLNMT|CaM KMT	calmodulin-lysine N-methyltransferase	protein-coding	0.010000	0.308458			
ePOU_nocontrol_ChIP_peaks_unique-862	chr13	81167701	81167901	+	1.17062	NA	intron (NM_054053, intron 86 of 89)	intron (NM_054053, intron 86 of 89)	203727	NR_015587	319983	Mm.343027	NR_015587	ENSMUSG00000097098	9330111N05Rik	-	RIKEN cDNA 9330111N05 gene	ncRNA	0.015000	0.393035			
Oct4_nocontrol_ChIP_peaks_unique-68	chr4	109476359	109476559	+	1.17062	NA	promoter-TSS (NM_013876)	promoter-TSS (NM_013876)	46	NM_013876	29864	Mm.392580	NM_013876	ENSMUSG00000028557	Rnf11	-	ring finger protein 11	protein-coding	0.135000	0.810945			
ePOU_nocontrol_ChIP_peaks_unique-2910	chr9	75673163	75673363	+	1.17062	NA	intron (NM_009130, intron 6 of 11)	intron (NM_009130, intron 6 of 11)	10793	NM_009130	20255	Mm.2386	NM_009130	ENSMUSG00000032181	Scg3	1B1075|AI385542|Chgd|SgIII	secretogranin III	protein-coding	0.005000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-258	chr10	14691313	14691513	+	1.17062	NA	intron (NM_025418, intron 1 of 7)	intron (NM_025418, intron 1 of 7)	14076	NM_025418	66201	Mm.227983	NM_025418	ENSMUSG00000019868	Vta1	1110001D18Rik|1110059P08Rik|AU040813|C85340|LIP5|SBP1	vesicle (multivesicular body) trafficking 1	protein-coding	0.000000	0.318408	-32(TATGCATTATTCAAG,+,0.00),-32(TATGCATTATTCAAG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2259	chr5	65683933	65684133	+	1.17062	NA	intron (NM_001081321, intron 2 of 32)	intron (NM_001081321, intron 2 of 32)	14203	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|B230308N11Rik|E230024D05Rik	PDS5 cohesin associated factor A	protein-coding	0.005000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-2233	chr5	34761707	34761907	+	1.17062	NA	promoter-TSS (NM_010414)	promoter-TSS (NM_010414)	67	NM_010414	15194	Mm.209071	NM_010414	ENSMUSG00000029104	Htt	AI256365|C430023I11Rik|Hd|Hdh|IT15	huntingtin	protein-coding	0.100000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-959	chr14	45642893	45643093	+	1.17062	NA	intron (NM_001042719, intron 1 of 13)	intron (NM_001042719, intron 1 of 13)	15060	NR_039593	100628600		NR_039593	ENSMUSG00000093167	Mir5131	mmu-mir-5131|mu-mir-5131	microRNA 5131	ncRNA	0.020000	0.363184		9(AAGGAATATGCATT,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2409	chr6	33501275	33501475	+	1.17062	NA	intron (NM_009148, intron 9 of 17)	L1_Rod|LINE|L1	252247	NM_001347089	20336	Mm.265512	NM_009148	ENSMUSG00000029763	Exoc4	C78892|Sec8|Sec8l1	exocyst complex component 4	protein-coding	0.015000	0.358209			76(ATTTACATGAGTGTGC,-,0.00)
Oct4_nocontrol_ChIP_peaks_unique-11	chr10	62385471	62385671	+	1.17062	NA	intron (NM_145419, intron 17 of 17)	B2_Mm2|SINE|B2	-5663	NM_010438	15275	Mm.196605	NM_010438	ENSMUSG00000037012	Hk1	BB404130|Hk-1|Hk1-s|dea|mHk1-s	hexokinase 1	protein-coding	0.000000	0.358209		-58(AATGCCTATGCATA,+,0.00),-58(AATGCCTATGCATA,-,0.00),-52(TATGCATATGTACA,+,0.00),-52(TATGCATATGTACA,-,0.00),-36(CATACATATACATA,+,0.00),-36(CATACATATACATA,-,0.00),-30(TATACATATGTATG,+,0.00),-30(TATACATATGTATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-96	chr1	82896311	82896511	+	1.17062	NA	3' UTR (NM_010472, exon 13 of 13)	3' UTR (NM_010472, exon 13 of 13)	56951	NM_010472	15463	Mm.392569	NM_010472	ENSMUSG00000026159	Agfg1	AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip	ArfGAP with FG repeats 1	protein-coding	0.005000	0.308458	-20(TATGAATTTTGTATG,+,0.00),-20(TATGAATTTTGTATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2798	chr8	108087678	108087878	+	1.17062	NA	Intergenic	Intergenic	496899	NR_077224	109215	Mm.65282	NR_077224	ENSMUSG00000110613	Lncbate1	3010033K07Rik|Lnc-BATE1	brown adipose tissue enriched long non-coding RNA 1	ncRNA	0.005000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-716	chr12	76962292	76962492	+	1.17062	NA	promoter-TSS (NM_008558)	promoter-TSS (NM_008558)	-144	NM_001361664	17187	Mm.268548	NM_008558	ENSMUSG00000059436	Max	AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8	Max protein	protein-coding	0.080000	0.616915			
ePOU_nocontrol_ChIP_peaks_unique-422	chr11	11462073	11462273	+	1.17062	NA	exon (NM_015785, exon 1 of 8)	exon (NM_015785, exon 1 of 8)	246	NM_015785	53604	Mm.9500	NM_015785	ENSMUSG00000020193	Zpbp	4930486K01Rik|Iam38|Sp38	zona pellucida binding protein	protein-coding	0.165000	0.796020			
ePOU_nocontrol_ChIP_peaks_unique-2107	chr4	84357703	84357903	+	1.17062	NA	intron (NM_001369083, intron 5 of 6)	intron (NM_001369083, intron 5 of 6)	252394	NM_001369082	242509	Mm.190774	NM_172870	ENSMUSG00000028487	Bnc2	5031434M05Rik|8430420F16Rik	basonuclin 2	protein-coding	0.005000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-813	chr13	30136545	30136745	+	1.17062	NA	5' UTR (NM_153546, exon 1 of 13)	5' UTR (NM_153546, exon 1 of 13)	155	NM_153546	218121	Mm.89682	NM_153546	ENSMUSG00000038732	Mboat1	9130215M02Rik|BC023845|LPEAT1|Moact1|Oact1	membrane bound O-acyltransferase domain containing 1	protein-coding	0.085000	0.716418			
ePOU_nocontrol_ChIP_peaks_unique-2201	chr5	19539477	19539677	+	1.17062	NA	intron (NM_001170746, intron 1 of 22)	intron (NM_001170746, intron 1 of 22)	312531	NM_001170746	50791	Mm.332231	NM_015823	ENSMUSG00000040003	Magi2	AIP-1|Acvri1|Acvrinp1|Acvrip1|Magi-2|S-SCAM|mKIAA0705	membrane associated guanylate kinase, WW and PDZ domain containing 2	protein-coding	0.010000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-1475	chr18	60753899	60754099	+	1.17062	NA	Intergenic	B3|SINE|B2	-5334	NM_008306	15531	Mm.181862	NM_008306	ENSMUSG00000054008	Ndst1	1200015G06Rik|HSNST|HSNST 1|Hsst|N-HSST|N-HSST 1|NDST-1|b2b2230Clo	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	protein-coding	0.005000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-1524	chr19	6141303	6141503	+	1.17062	NA	promoter-TSS (NM_019722)	promoter-TSS (NM_019722)	-266	NM_019722	56327	Mm.21071	NM_019722	ENSMUSG00000024944	Arl2	2610009M23Rik|AI115441|AW553335	ADP-ribosylation factor-like 2	protein-coding	0.060000	0.552239			
ePOU_nocontrol_ChIP_peaks_unique-1102	chr15	49140684	49140884	+	1.17062	NA	Intergenic	Intergenic	-348795	NM_001081391	239420	Mm.309363	NM_001081391	ENSMUSG00000022311	Csmd3	4930500N14Rik|mKIAA1894	CUB and Sushi multiple domains 3	protein-coding	0.000000	0.273632			
ePOU_nocontrol_ChIP_peaks_unique-2217	chr5	29607620	29607820	+	1.17062	NA	intron (NM_133907, intron 10 of 22)	intron (NM_133907, intron 10 of 22)	38478	NM_133907	100763	Mm.137746	NM_133907	ENSMUSG00000039000	Ube3c	AI853514|mKIAA0010	ubiquitin protein ligase E3C	protein-coding	0.000000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-2267	chr5	71113508	71113708	+	1.17062	NA	Intergenic	Intergenic	-17759	NM_008066	14395	Mm.5304	NM_008066	ENSMUSG00000000560	Gabra2	C630048P16Rik|Gabra-2	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2	protein-coding	0.020000	0.388060			
Oct4_nocontrol_ChIP_peaks_unique-91	chr7	84779417	84779617	+	1.17062	NA	Intergenic	L1MD2|LINE|L1	-74054	NM_146415	258410	Mm.484702	NM_146415	ENSMUSG00000070460	Olfr291	MOR254-2	olfactory receptor 291	protein-coding	0.060000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-1677	chr2	50284976	50285176	+	1.17062	NA	intron (NM_001348198, intron 6 of 7)	intron (NM_001348198, intron 6 of 7)	11725	NM_001348199	109129	Mm.29214	NM_133839	ENSMUSG00000026766	Mmadhc	2010311D03Rik|AI314967|CblD	methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria	protein-coding	0.005000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-817	chr13	35109894	35110094	+	1.17062	NA	Intergenic	MurERV4-int|LTR|ERVK	57810	NR_153831	75197	Mm.234091	NR_153831	ENSMUSG00000113906	4930529N20Rik	-	RIKEN cDNA 4930529N20 gene	ncRNA	0.000000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-1215	chr16	31233948	31234148	+	1.17062	NA	Intergenic	Intergenic	-32810	NM_030138	78618	Mm.274646	NM_030138	ENSMUSG00000049076	Acap2	4832442G16|9530039J15Rik|CNT-B2|Centb2|mKIAA0041	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2	protein-coding	0.030000	0.532338			
ePOU_nocontrol_ChIP_peaks_unique-2758	chr8	72443586	72443786	+	1.17062	NA	promoter-TSS (NM_028170)	promoter-TSS (NM_028170)	92	NM_028500	73316	Mm.196315	NM_028500	ENSMUSG00000019732	Calr3	1700031L01Rik|6330586I20Rik|Crt2|cspn	calreticulin 3	protein-coding	0.065000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-2868	chr9	46282871	46283071	+	1.17062	NA	promoter-TSS (NM_146000)	promoter-TSS (NM_146000)	-41	NM_146000	215051	Mm.32648	NM_146000	ENSMUSG00000032077	Bud13	AV305342|D030060M11Rik	BUD13 homolog	protein-coding	0.065000	0.582090			
ePOU_nocontrol_ChIP_peaks_unique-333	chr10	68115125	68115325	+	1.17062	NA	intron (NM_023598, intron 8 of 9)	intron (NM_023598, intron 8 of 9)	135655	NM_001359319	170799	Mm.209844	NM_133244	ENSMUSG00000037846	Rtkn2	B130039D23Rik|Mbf|Plekhk1	rhotekin 2	protein-coding	0.005000	0.497512			36(TCTTTCTCATGGAAAC,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2694	chr8	13227462	13227662	+	1.17062	NA	Intergenic	Intergenic	26600	NM_172750	234072	Mm.132785	NM_172750	ENSMUSG00000031448	Adprhl1	Arh2|D330008N11Rik	ADP-ribosylhydrolase like 1	protein-coding	0.020000	0.542289			
ePOU_nocontrol_ChIP_peaks_unique-1497	chr18	73650403	73650603	+	1.17062	NA	intron (NM_001364968, intron 5 of 8)	intron (NM_001364968, intron 5 of 8)	53288	NR_157374	17128	Mm.100399	NM_008540	ENSMUSG00000024515	Smad4	AW743858|D18Wsu70e|DPC4|Madh4	SMAD family member 4	protein-coding	0.015000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-2946	chr9	110131854	110132054	+	1.17062	NA	promoter-TSS (NM_009211)	promoter-TSS (NM_009211)	-70	NM_009211	20588	Mm.85410	NM_009211	ENSMUSG00000032481	Smarcc1	AI115498|BAF155|Rsc8|SRG3|msp3	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	protein-coding	0.115000	0.696517			
ePOU_nocontrol_ChIP_peaks_unique-2158	chr4	129263558	129263758	+	1.17062	NA	Intergenic	Intergenic	-2254	NM_001285867	97130	Mm.331907	NM_001033189	ENSMUSG00000050390	C77080	mKIAA1522	expressed sequence C77080	protein-coding	0.010000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-2173	chr4	140962840	140963040	+	1.17062	NA	intron (NM_001355515, intron 1 of 7)	intron (NM_001355515, intron 1 of 7)	1669	NM_001355515	67680	Mm.246965	NM_023374	ENSMUSG00000009863	Sdhb	0710008N11Rik	succinate dehydrogenase complex, subunit B, iron sulfur (Ip)	protein-coding	0.005000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-48	chr1	45795397	45795597	+	1.17062	NA	5' UTR (NM_028599, exon 1 of 21)	5' UTR (NM_028599, exon 1 of 21)	331	NM_028599	73674	Mm.270376	NM_028599	ENSMUSG00000025995	Wdr75	1300003A18Rik|2410118I19Rik|C77608	WD repeat domain 75	protein-coding	0.095000	0.656716			
ePOU_nocontrol_ChIP_peaks_unique-2242	chr5	45857545	45857745	+	1.17062	NA	promoter-TSS (NM_001163073)	promoter-TSS (NM_001163073)	-105	NM_178142	209707	Mm.71498	NM_172153	ENSMUSG00000015882	Lcorl	Mlr1	ligand dependent nuclear receptor corepressor-like	protein-coding	0.100000	0.726368			
ePOU_nocontrol_ChIP_peaks_unique-2674	chr7	134472568	134472768	+	1.17062	NA	Intergenic	Intergenic	-95837	NM_001081331	71007	Mm.334285	NM_001081331	ENSMUSG00000030994	D7Ertd443e	4933400E14Rik|FATS|Gm497	DNA segment, Chr 7, ERATO Doi 443, expressed	protein-coding	0.000000	0.313433			-54(ATTTGCAACATTAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-715	chr12	76958399	76958599	+	1.17062	NA	intron (NM_001146176, intron 1 of 3)	intron (NM_001146176, intron 1 of 3)	3749	NM_001361663	17187	Mm.268548	NM_008558	ENSMUSG00000059436	Max	AA960152|AI875693|bHLHd4|bHLHd5|bHLHd6|bHLHd7|bHLHd8	Max protein	protein-coding	0.000000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-1517	chr19	4192073	4192273	+	1.17062	NA	promoter-TSS (NM_031868)	promoter-TSS (NM_031868)	-1	NM_031868	19045	Mm.1970	NM_031868	ENSMUSG00000040385	Ppp1ca	Ppp1c|dism2	protein phosphatase 1 catalytic subunit alpha	protein-coding	0.105000	0.741294			
ePOU_nocontrol_ChIP_peaks_unique-2710	chr8	34154615	34154815	+	1.17062	NA	5' UTR (NM_026432, exon 1 of 6)	5' UTR (NM_026432, exon 1 of 6)	136	NM_026432	67887	Mm.290353	NM_026432	ENSMUSG00000031532	Saraf	1810045K07Rik|Tmem66	store-operated calcium entry-associated regulatory factor	protein-coding	0.095000	0.696517			
ePOU_nocontrol_ChIP_peaks_unique-3003	chrX	166766993	166767193	+	1.17062	NA	Intergenic	Intergenic	105068	NR_046015	382255	Mm.336320	NR_046015	ENSMUSG00000086860	Gm1720	-	predicted gene 1720	ncRNA	0.020000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-252	chr10	11280948	11281148	+	1.17062	NA	promoter-TSS (NM_027968)	promoter-TSS (NM_027968)	-282	NM_027968	71865	Mm.276229	NM_027968	ENSMUSG00000047648	Fbxo30	1700026A16Rik|MUSA1	F-box protein 30	protein-coding	0.080000	0.621891			
merged_common-63	chr12	59040337	59040537	+	1.17062	NA	Intergenic	U2|snRNA|snRNA	21035	NM_001306218	78232	Mm.290070	NM_030057	ENSMUSG00000020993	Trappc6b	5830498C14Rik|C79212	trafficking protein particle complex 6B	protein-coding	0.025000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-1431	chr18	19851480	19851680	+	1.17062	NA	Intergenic	Intergenic	150517	NM_001291809	13507	Mm.89935	NM_007882	ENSMUSG00000059898	Dsc3	5430426I24Rik	desmocollin 3	protein-coding	0.000000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-2377	chr5	147188510	147188710	+	1.17062	NA	promoter-TSS (NM_008178)	promoter-TSS (NM_008178)	-86	NM_008178	14842	Mm.4797	NM_008178	ENSMUSG00000053129	Gsx1	Gsh-1|Gsh1	GS homeobox 1	protein-coding	0.060000	0.532338			
merged_common-116	chr17	15924012	15924212	+	1.17062	NA	Intergenic	L1_Mus3|LINE|L1	-97526	NM_178615	68799	Mm.293466	NM_178615	ENSMUSG00000048027	Rgmb	1110059F19Rik|DRAGON	repulsive guidance molecule family member B	protein-coding	0.000000	0.293532			
ePOU_nocontrol_ChIP_peaks_unique-1287	chr16	88774321	88774521	+	1.17062	NA	promoter-TSS (NM_027170)	promoter-TSS (NM_027170)	-215	NM_027170	69696	Mm.358728	NM_027170	ENSMUSG00000048830	2310057N15Rik	Krtap13-1	RIKEN cDNA 2310057N15 gene	protein-coding	0.005000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-492	chr11	59163557	59163757	+	1.17062	NA	promoter-TSS (NM_001270791)	promoter-TSS (NM_001270791)	88	NM_001270791	216792	Mm.266175	NM_173785	ENSMUSG00000049287	Iba57	4930543L23Rik|A230051G13Rik|C1orf69	IBA57 homolog, iron-sulfur cluster assembly	protein-coding	0.125000	0.746269			
ePOU_nocontrol_ChIP_peaks_unique-142	chr1	133961855	133962055	+	1.17062	NA	Intergenic	Intergenic	-40554	NM_054077	116847	Mm.214514	NM_054077	ENSMUSG00000041577	Prelp	7330409J17Rik|SLRR2A	proline arginine-rich end leucine-rich repeat	protein-coding	0.030000	0.611940			
ePOU_nocontrol_ChIP_peaks_unique-1878	chr3	44318131	44318331	+	1.17062	NA	Intergenic	Intergenic	1060029	NR_045172	72511	Mm.140700	NR_045172	ENSMUSG00000097040	2610316D01Rik	-	RIKEN cDNA 2610316D01 gene	ncRNA	0.000000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-2718	chr8	44336499	44336699	+	1.17062	NA	Intergenic	Intergenic	-613609	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT atypical cadherin 1	protein-coding	0.010000	0.333333			-51(TTATTTTCATGCTAAC,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1146	chr15	85634603	85634803	+	1.17062	NA	Intergenic	CpG	-52882	NM_009528	22422	Mm.306946	NM_009528	ENSMUSG00000022382	Wnt7b	Wnt-7b	wingless-type MMTV integration site family, member 7B	protein-coding	0.085000	0.686567			
merged_common-119	chr17	57060399	57060599	+	1.17062	NA	promoter-TSS (NM_025877)	promoter-TSS (NM_025877)	-636	NM_025877	66972	Mm.23720	NM_025877	ENSMUSG00000046329	Slc25a23	2310067G05Rik|SCaMC-3	solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	protein-coding	0.080000	0.636816			
ePOU_nocontrol_ChIP_peaks_unique-2854	chr9	31326404	31326604	+	1.17062	NA	intron (NM_001368845, intron 4 of 21)	intron (NM_001368845, intron 4 of 21)	13077	NM_001368845	382066	Mm.335039	NM_199315	ENSMUSG00000042496	Prdm10	Gm1112|tristanin	PR domain containing 10	protein-coding	0.000000	0.363184			31(TATTTATCTTATAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2099	chr4	64492848	64493048	+	1.17062	NA	Intergenic	Intergenic	-216345	NR_151546	102633436	Mm.411637	NR_151546		Gm11217	-	predicted gene 11217	ncRNA	0.000000	0.278607			
ePOU_nocontrol_ChIP_peaks_unique-2921	chr9	90126432	90126632	+	1.17062	NA	Intergenic	tRNA-Lys-AAG|tRNA|tRNA	-11712	NM_001357780	21761	Mm.426209	NM_024431	ENSMUSG00000062270	Morf4l1	MORFRG15|MRG15|TEG-189|Tex189|mKIAA4002	mortality factor 4 like 1	protein-coding	0.045000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-739	chr12	86241635	86241835	+	1.17062	NA	promoter-TSS (NM_027405)	promoter-TSS (NM_027405)	-123	NM_001324488	70373	Mm.252967	NM_027405	ENSMUSG00000021254	Gpatch2l	1700020O03Rik|4732487G21Rik|A630090I05Rik|Kiaa1152	G patch domain containing 2 like	protein-coding	0.060000	0.631841			
ePOU_nocontrol_ChIP_peaks_unique-693	chr12	57235111	57235311	+	1.17062	NA	intron (NM_001164370, intron 1 of 9)	intron (NM_001164370, intron 1 of 9)	4786	NM_001164370	73490	Mm.268180	NM_001164370	ENSMUSG00000047022	Mipol1	1700081O04Rik|6030439O22Rik|AU021838|AW536152|D12Ertd19e	mirror-image polydactyly 1	protein-coding	0.005000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-1225	chr16	33464847	33465047	+	1.17062	NA	intron (NM_001358570, intron 5 of 8)	intron (NM_001358570, intron 5 of 8)	-52381	NM_001370999									0.000000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-1477	chr18	61706542	61706742	+	1.17062	NA	intron (NM_172832, intron 1 of 5)	intron (NM_172832, intron 1 of 5)	993	NM_172832	240334	Mm.234457	NM_172832	ENSMUSG00000024579	Pcyox1l	BC060677|C630049M13	prenylcysteine oxidase 1 like	protein-coding	0.020000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-1409	chr17	88066192	88066392	+	1.17062	NA	Intergenic	Intergenic	-1001	NM_001081034	225055	Mm.386857	NM_001081034	ENSMUSG00000005371	Fbxo11	C80048|Jf	F-box protein 11	protein-coding	0.055000	0.606965			
ePOU_nocontrol_ChIP_peaks_unique-2687	chr8	5539335	5539535	+	1.17062	NA	Intergenic	Intergenic	-434148	NM_011388	20494	Mm.3500	NM_011388	ENSMUSG00000023073	Slc10a2	9130221J18Rik|AI605518|ASBT|IBAT|ISBT	solute carrier family 10, member 2	protein-coding	0.005000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-521	chr11	70198197	70198397	+	1.17062	NA	Intergenic	ORSL-2b|DNA|hAT-Tip100	-15613	NM_153081	216867	Mm.289238	NM_153081	ENSMUSG00000040938	Slc16a11	AB041591|MCT 11|MNCb-2717	solute carrier family 16 (monocarboxylic acid transporters), member 11	protein-coding	0.000000	0.383085			
Oct4_nocontrol_ChIP_peaks_unique-33	chr15	8972790	8972990	+	1.17062	NA	intron (NM_198024, intron 1 of 13)	intron (NM_198024, intron 1 of 13)	4941	NM_198024	223332	Mm.321371	NM_198024	ENSMUSG00000048424	Ranbp3l	C130037N17Rik	RAN binding protein 3-like	protein-coding	0.010000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-2905	chr9	71485616	71485816	+	1.17062	NA	promoter-TSS (NM_001164793)	promoter-TSS (NM_001164793)	267	NM_178602	28015	Mm.21094	NM_178602	ENSMUSG00000032199	Polr2m	AA407243|AA408799|AI303746|AW553238|D9Wsu138e|Grinl1a|mKIAA4185	polymerase (RNA) II (DNA directed) polypeptide M	protein-coding	0.105000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-2440	chr6	56715037	56715237	+	1.17062	NA	exon (NM_030235, exon 1 of 16)	exon (NM_030235, exon 1 of 16)	232	NM_030235	78937	Mm.105343	NM_030235	ENSMUSG00000029787	Avl9	5830411G16Rik|D730049P16Rik|mKIAA0241	AVL9 cell migration associated	protein-coding	0.110000	0.706468			
ePOU_nocontrol_ChIP_peaks_unique-2883	chr9	56434590	56434790	+	1.17062	NA	intron (NM_025812, intron 1 of 9)	B1F1|SINE|Alu	16071	NM_025812	66867	Mm.150856	NM_025812	ENSMUSG00000032329	Hmg20a	1200004E06Rik|5730490E10Rik|Hmgxb1|Ibraf	high mobility group 20A	protein-coding	0.000000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-1544	chr19	16251220	16251420	+	1.17062	NA	intron (NM_008139, intron 2 of 6)	intron (NM_008139, intron 2 of 6)	63684	NR_105832	102465218		NR_105832	ENSMUSG00000098718	Mir496b	Gm28028|mmu-mir-496b	microRNA 496b	ncRNA	0.000000	0.263682			-55(GCTTTATTTTACAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2533	chr6	139552847	139553047	+	1.17062	NA	Intergenic	Intergenic	-51038	NM_001128090	632971	Mm.475610	NM_001128090	ENSMUSG00000092164	Rergl	EG632971	RERG/RAS-like	protein-coding	0.005000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-628	chr11	120151098	120151298	+	1.17062	NA	5' UTR (NM_001164802, exon 1 of 11)	5' UTR (NM_001164802, exon 1 of 11)	153	NM_001361697	72055	Mm.253403	NM_024249	ENSMUSG00000061306	Slc38a10	1810073N04Rik	solute carrier family 38, member 10	protein-coding	0.080000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-606	chr11	109985527	109985727	+	1.17062	NA	intron (NM_001362749, intron 1 of 37)	RLTR13D5|LTR|ERVK	10218	NM_001362749	27404	Mm.341004	NM_013851	ENSMUSG00000020620	Abca8b	Abca8	ATP-binding cassette, sub-family A (ABC1), member 8b	protein-coding	0.005000	0.417910	-8(ATTGCATTATTCATG,+,0.00),-8(ATTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1156	chr15	93701049	93701249	+	1.17062	NA	Intergenic	Intergenic	-105247	NM_001033217	106042	Mm.150314	NM_001033217	ENSMUSG00000036158	Prickle1	1110058P22Rik|AW215793|Prickle|b2b019Clo|mpk1	prickle planar cell polarity protein 1	protein-coding	0.025000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-519	chr11	69990997	69991197	+	1.17062	NA	promoter-TSS (NM_019749)	promoter-TSS (NM_019749)	-273	NM_019749	56486	Mm.272460	NM_019749	ENSMUSG00000018567	Gabarap	-	gamma-aminobutyric acid receptor associated protein	protein-coding	0.030000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-2352	chr5	135806738	135806938	+	1.17062	NA	Intergenic	Intergenic	-11268	NM_021403	58212	Mm.271230	NM_021403	ENSMUSG00000039860	Srrm3	2900083I11Rik|AB041661|SRm300-like|Srrm2l	serine/arginine repetitive matrix 3	protein-coding	0.080000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-368	chr10	91695922	91696122	+	1.17062	NA	Intergenic	L1M3|LINE|L1	-192807	NR_152729	102633867	Mm.351514	NR_152729	ENSMUSG00000111657	Gm31592	-	predicted gene, 31592	ncRNA	0.000000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-27	chr1	25886958	25887158	+	1.17062	NA	Intergenic	Intergenic	-57351	NM_175642	210933	Mm.336569	NM_175642	ENSMUSG00000033569	Adgrb3	A830096D10Rik|Bai3	adhesion G protein-coupled receptor B3	protein-coding	0.005000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-2678	chr7	139201988	139202188	+	1.17062	NA	intron (NM_001162540, intron 1 of 11)	Lx7|LINE|L1	-10900	NM_027164	76612	Mm.17757	NM_027164	ENSMUSG00000015980	Lrrc27	1700071K18Rik|2310044E02Rik	leucine rich repeat containing 27	protein-coding	0.000000	0.313433			34(CCATTTATTTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1285	chr16	86320482	86320682	+	1.17062	NA	Intergenic	URR1B|DNA|hAT-Charlie	-419457	NM_011782	23794	Mm.112933	NM_011782	ENSMUSG00000022894	Adamts5	9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|ADMP-2|AI481094|ASMP-2	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)	protein-coding	0.015000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-1508	chr18	88876926	88877126	+	1.17062	NA	intron (NM_018821, intron 2 of 2)	L1M4a2|LINE|L1	17181	NM_018821	54607	Mm.91920	NM_018821	ENSMUSG00000056153	Socs6	1500012M23Rik|5830401B18Rik|AI447482|Cis4|Cish4|HSPC060|SOCS-4|SOCS-6|SSI4|STAI4|STATI4|Socs4	suppressor of cytokine signaling 6	protein-coding	0.000000	0.333333			-91(ATTAGCATGATACATA,-,0.00),65(CTTTAAAAGACACAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2965	chr9	121857582	121857782	+	1.17062	NA	5' UTR (NM_019814, exon 1 of 4)	5' UTR (NM_019814, exon 1 of 4)	114	NM_001357841	56295	Mm.347915	NM_019814	ENSMUSG00000038412	Higd1a	2210020B17Rik|7420700H20Rik|AI303276|AW049839|HIMP1|Hig1	HIG1 domain family, member 1A	protein-coding	0.120000	0.731343			
ePOU_nocontrol_ChIP_peaks_unique-1467	chr18	54828280	54828480	+	1.17062	NA	Intergenic	Intergenic	161800	NM_175751	269023	Mm.192984	NM_175751	ENSMUSG00000052713	Zfp608	4932417D18Rik|D430007A19Rik|Znf608	zinc finger protein 608	protein-coding	0.000000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-130	chr1	124440763	124440963	+	1.17062	NA	Intergenic	Intergenic	-395304	NM_199021	269109	Mm.417716	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding	0.000000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-809	chr13	28629170	28629370	+	1.17062	NA	intron (NR_045054, intron 5 of 7)	intron (NR_045054, intron 5 of 7)	81603	NR_105787	102466635		NR_105787	ENSMUSG00000099158	Mir6368	Gm27800|mmu-mir-6368	microRNA 6368	ncRNA	0.010000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-167	chr1	155973106	155973306	+	1.17062	NA	promoter-TSS (NM_001039184)	promoter-TSS (NM_001039184)	49	NM_001039184	74081	Mm.260247	NM_001039184	ENSMUSG00000033671	Cep350	4933409L06Rik|6430546F08Rik	centrosomal protein 350	protein-coding	0.120000	0.746269			
ePOU_nocontrol_ChIP_peaks_unique-2480	chr6	92811629	92811829	+	1.17062	NA	intron (NM_175314, intron 30 of 39)	intron (NM_175314, intron 30 of 39)	-105545	NM_001081146	243548	Mm.248820	NM_001081146	ENSMUSG00000030020	Prickle2	6230400G14Rik|6720451F06Rik|mpk2	prickle planar cell polarity protein 2	protein-coding	0.000000	0.398010			-26(ATTTGTATGGAAAATG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1761	chr2	121621563	121621763	+	1.17062	NA	intron (NM_001360084, intron 1 of 13)	intron (NM_001360084, intron 1 of 13)	113170	NM_001369185	241627	Mm.293284	NM_030234	ENSMUSG00000027242	Wdr76	5830411K18Rik|6030457D09|AA517836	WD repeat domain 76	protein-coding	0.010000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-1257	chr16	59567850	59568050	+	1.17062	NA	intron (NM_174848, intron 2 of 21)	intron (NM_174848, intron 2 of 21)	33097	NM_174848	224273	Mm.246424	NM_174848	ENSMUSG00000022723	Crybg3	5031404N19|AU022790|Gm9581	beta-gamma crystallin domain containing 3	protein-coding	0.015000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-994	chr14	67038390	67038590	+	1.17062	NA	intron (NM_001360033, intron 3 of 10)	intron (NM_001360033, intron 3 of 10)	-29613	NM_009761	12177	Mm.29820	NM_009761	ENSMUSG00000022051	Bnip3l	C86132|D14Ertd719e|Nip3L|Nix	BCL2/adenovirus E1B interacting protein 3-like	protein-coding	0.000000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-938	chr14	29153113	29153313	+	1.17062	NA	intron (NM_009785, intron 13 of 37)	intron (NM_009785, intron 13 of 37)	135005	NM_176920	319476	Mm.95780	NM_176920	ENSMUSG00000045776	Lrtm1	A930016D02Rik	leucine-rich repeats and transmembrane domains 1	protein-coding	0.015000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-2077	chr4	44558421	44558621	+	1.17062	NA	intron (NM_008782, intron 8 of 9)	intron (NM_008782, intron 8 of 9)	49047	NR_039580	100628590		NR_039580	ENSMUSG00000092761	Mir5120	mmu-mir-5120|mu-mir-5120	microRNA 5120	ncRNA	0.050000	0.532338			-68(CCATTTGCATGCTAAT,+,0.00),-66(ATTTGCATGCTAATTT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1667	chr2	35534313	35534513	+	1.17062	NA	Intergenic	MER34|LTR|ERV1	-24045	NM_001114125	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding	0.000000	0.442786		22(AATGAATATGCATG,+,0.00),22(AATGAATATGCATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-881	chr13	95186649	95186849	+	1.17062	NA	intron (NM_001170669, intron 1 of 18)	intron (NM_001170669, intron 1 of 18)	36301	NM_001170669	218461	Mm.100167	NM_172263	ENSMUSG00000021684	Pde8b	B230331L10Rik|C030047E14Rik	phosphodiesterase 8B	protein-coding	0.015000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-1600	chr19	52199637	52199837	+	1.17062	NA	Intergenic	Intergenic	-64560	NM_008386	16333	Mm.46269	NM_008386	ENSMUSG00000035804	Ins1	Ins-1|Ins2-rs1	insulin I	protein-coding	0.005000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-1228	chr16	33844205	33844405	+	1.17062	NA	intron (NM_001145884, intron 1 of 14)	intron (NM_001145884, intron 1 of 14)	14640	NM_010580	16419	Mm.6424	NM_010580	ENSMUSG00000022817	Itgb5	AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5	integrin beta 5	protein-coding	0.015000	0.447761			
ePOU_nocontrol_ChIP_peaks_unique-1835	chr2	172440345	172440545	+	1.17062	NA	promoter-TSS (NM_025542)	promoter-TSS (NM_025542)	-133	NM_025542	66404	Mm.25157	NM_025542	ENSMUSG00000027502	Rtf2	1700067C04Rik|2410001C21Rik|5730427M17Rik|AA589417|Rtfdc1	replication termination factor 2	protein-coding	0.095000	0.626866			36(ATTTTCAAGACAATTG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2062	chr4	20198053	20198253	+	1.17062	NA	intron (NM_001290410, intron 4 of 5)	intron (NM_001290410, intron 4 of 5)	156101	NM_010281	14590	Mm.20461	NM_010281	ENSMUSG00000073987	Ggh	gamma-GH	gamma-glutamyl hydrolase	protein-coding	0.005000	0.313433		40(AATAAATATGCAAA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-907	chr13	112683541	112683741	+	1.17062	NA	intron (NM_178746, intron 2 of 14)	intron (NM_178746, intron 2 of 14)	22875	NM_178746	268706	Mm.40834	NM_175376	ENSMUSG00000047789	Slc38a9	4833412L08Rik|6720411P22Rik|9130023D20Rik|9430067K09Rik|A730092C09	solute carrier family 38, member 9	protein-coding	0.010000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-382	chr10	102758419	102758619	+	1.17062	NA	Intergenic	Intergenic	246297	NM_146240	237504	Mm.282672	NM_146240	ENSMUSG00000044921	Rassf9	AW322107|Pamci	Ras association (RalGDS/AF-6) domain family (N-terminal) member 9	protein-coding	0.005000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-1931	chr3	79883491	79883691	+	1.17062	NA	Intergenic	Intergenic	-2339	NM_133187	68659	Mm.427274	NM_133187	ENSMUSG00000027955	Gask1b	1110032E23Rik|2210419I08Rik|AV011458|Ened|Fam198b|GaskbB	golgi associated kinase 1B	protein-coding	0.005000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-1292	chr16	92400209	92400409	+	1.17062	NA	promoter-TSS (NM_019466)	promoter-TSS (NM_019466)	-231	NM_019466	54720	Mm.265744	NM_019466	ENSMUSG00000022951	Rcan1	Adapt78|CALP1L|CSP1|DSC1|Dscr1|MCIP1|RCN1	regulator of calcineurin 1	protein-coding	0.040000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-74	chr1	63901014	63901214	+	1.17062	NA	Intergenic	LTR16B2|LTR|ERVL	-63613	NR_027824	433315	Mm.342696	NM_001013800	ENSMUSG00000044689	Gm13749	-	predicted gene 13749	ncRNA	0.000000	0.368159			-50(TATCTGTAATGCAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-634	chr12	3662338	3662538	+	1.17062	NA	intron (NM_001162465, intron 8 of 17)	B3|SINE|B2	89454	NM_007886	13528	Mm.286202	NM_007886	ENSMUSG00000071454	Dtnb	-	dystrobrevin, beta	protein-coding	0.000000	0.432836			-32(ATTTGCATGCCAAGTG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2796	chr8	106561318	106561518	+	1.17062	NA	Intergenic	Intergenic	-25725	NR_045470	68692	Mm.416843	NR_045470	ENSMUSG00000099139	1110028F18Rik	-	RIKEN cDNA 1110028F18 gene	ncRNA	0.030000	0.552239			
Oct4_nocontrol_ChIP_peaks_unique-28	chr14	21370228	21370428	+	1.17062	NA	intron (NM_134079, intron 8 of 10)	intron (NM_134079, intron 8 of 10)	-129442	NM_001205241	54169	Mm.248967	NM_017479	ENSMUSG00000021767	Kat6b	AI507552|B130044K16Rik|MYST-4|Morf|Myst4|mKIAA0383|qkf|querkopf	K(lysine) acetyltransferase 6B	protein-coding	0.010000	0.323383			
ePOU_nocontrol_ChIP_peaks_unique-645	chr12	16091670	16091870	+	1.17062	NA	Intergenic	Intergenic	-274985	NM_144551	217410	Mm.491136	NM_144551	ENSMUSG00000020601	Trib2	AW319517|TRB-2|TRB2	tribbles pseudokinase 2	protein-coding	0.015000	0.437811			-88(CCTTTGTCATGGTGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-147	chr1	135313483	135313683	+	1.17062	NA	5' UTR (NM_001360857, exon 1 of 6)	5' UTR (NM_001360857, exon 1 of 6)	154	NM_001360858	21854	Mm.2368	NM_011590	ENSMUSG00000062580	Timm17a	Tim17a|mTim17a	translocase of inner mitochondrial membrane 17a	protein-coding	0.075000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-2657	chr7	122289034	122289234	+	1.17062	NA	promoter-TSS (NM_008855)	promoter-TSS (NM_008855)	9	NM_001316672	18751	Mm.207496	NM_008855	ENSMUSG00000052889	Prkcb	PKC-B|PKC-Beta|Pkcb|Prkcb1|Prkcb2	protein kinase C, beta	protein-coding	0.105000	0.751244			
ePOU_nocontrol_ChIP_peaks_unique-1310	chr17	10320033	10320233	+	1.17062	NA	promoter-TSS (NM_001159516)	promoter-TSS (NM_001159516)	214	NR_037588	100526796	Mm.384135	NR_037588		Cahm	B930003M22Rik	colon adenocarcinoma hypermethylated RNA	ncRNA	0.140000	0.741294			
ePOU_nocontrol_ChIP_peaks_unique-760	chr12	101975887	101976087	+	1.17062	NA	promoter-TSS (NM_016856)	promoter-TSS (NM_016856)	13	NM_016856	51786	Mm.716	NM_016856	ENSMUSG00000041781	Cpsf2	100kDa|2610024B04Rik|AI662483|Cpsf|MCPSF|mKIAA1367	cleavage and polyadenylation specific factor 2	protein-coding	0.095000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-1254	chr16	50896078	50896278	+	1.17062	NA	Intergenic	Intergenic	112769	NR_131006	78639	Mm.160109	NR_131005	ENSMUSG00000092276	1700116B05Rik	-	RIKEN cDNA 1700116B05 gene	ncRNA	0.000000	0.293532			4(ATTTGCATTGCCATGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-609	chr11	110732088	110732288	+	1.17062	NA	Intergenic	Intergenic	-235845	NM_001252207	16517	Mm.30176	NM_010604	ENSMUSG00000051497	Kcnj16	6430410F18Rik|AI132396|Kir5.1	potassium inwardly-rectifying channel, subfamily J, member 16	protein-coding	0.005000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-2376	chr5	147076533	147076733	+	1.17062	NA	promoter-TSS (NM_080795)	promoter-TSS (NM_080795)	-61	NM_080795	140887	Mm.272203	NM_080795	ENSMUSG00000016520	Lnx2	9630046H24|AW209022	ligand of numb-protein X 2	protein-coding	0.095000	0.651741			
ePOU_nocontrol_ChIP_peaks_unique-2345	chr5	132229707	132229907	+	1.17062	NA	intron (NM_001363480, intron 2 of 19)	intron (NM_001363480, intron 2 of 19)	313413	NM_001363480	319974	Mm.409595	NM_177047	ENSMUSG00000029673	Auts2	2700063G02Rik|A730011F23Rik|D830032G16Rik	autism susceptibility candidate 2	protein-coding	0.015000	0.522388			
Oct4_nocontrol_ChIP_peaks_unique-8	chr1	177796442	177796642	+	1.17062	NA	promoter-TSS (NM_007422)	promoter-TSS (NM_007422)	-33	NM_007422	11566	Mm.338021	NM_007422	ENSMUSG00000015961	Adss	AI314886|AS|Adss2	adenylosuccinate synthetase, non muscle	protein-coding	0.120000	0.771144			
ePOU_nocontrol_ChIP_peaks_unique-1689	chr2	59220030	59220230	+	1.17062	NA	intron (NM_001362994, intron 3 of 22)	intron (NM_001362994, intron 3 of 22)	58261	NM_001362996	227937	Mm.260938	NM_026361	ENSMUSG00000026991	Pkp4	5031422I09Rik|9430019K17Rik|Armrp|p0071	plakophilin 4	protein-coding	0.005000	0.492537			
ePOU_nocontrol_ChIP_peaks_unique-1174	chr15	103518181	103518381	+	1.17062	NA	intron (NM_001285890, intron 1 of 14)	intron (NM_001285890, intron 1 of 14)	3304	NM_001285890	18574	Mm.390792	NM_008800	ENSMUSG00000022489	Pde1b	Pde1b1	phosphodiesterase 1B, Ca2+-calmodulin dependent	protein-coding	0.005000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-2802	chr8	111258997	111259197	+	1.17062	NA	exon (NM_009149, exon 1 of 26)	exon (NM_009149, exon 1 of 26)	113	NM_001368315	20340	Mm.276271	NM_009149	ENSMUSG00000003316	Glg1	AI593353|AW537898|CFR|CFR-1|ESL-1|MG-160|MG160|Selel	golgi apparatus protein 1	protein-coding	0.085000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-2617	chr7	89193262	89193462	+	1.17062	NA	intron (NM_001360745, intron 5 of 13)	intron (NM_001360745, intron 5 of 13)	145425	NM_028343	72759	Mm.208477	NM_028343	ENSMUSG00000039428	Tmem135	2810439K08Rik|AW319712|PMP52	transmembrane protein 135	protein-coding	0.000000	0.283582			
ePOU_nocontrol_ChIP_peaks_unique-1078	chr15	28166328	28166528	+	1.17062	NA	Intergenic	MLT1C|LTR|ERVL-MaLR	-37338	NM_133365	110082	Mm.248464	NM_133365	ENSMUSG00000022262	Dnah5	AU022615|Dnahc5|Mdnah5|b2b1134Clo|b2b1154Clo|b2b1537Clo|b2b1565Clo|b2b3491Clo|b2b601Clo|mKIAA1603	dynein, axonemal, heavy chain 5	protein-coding	0.005000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-2100	chr4	66330865	66331065	+	1.17062	NA	intron (NM_207109, intron 1 of 22)	intron (NM_207109, intron 1 of 22)	73518	NM_019514	56079	Mm.445312	NM_019514	ENSMUSG00000028373	Astn2	1d8|Astnl|bM452J22.1	astrotactin 2	protein-coding	0.005000	0.378109			-53(ATTTGCAAGTTAAACA,-,0.00),43(TCTTTCTTTTTTAAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-23	chr1	22672087	22672287	+	1.17062	NA	intron (NM_001012624, intron 2 of 28)	intron (NM_001012624, intron 2 of 28)	133816	NM_001012623	116837	Mm.60061	NM_053270	ENSMUSG00000041670	Rims1	C030033M19Rik|RIM1|RIM1a|RIM1alpha|Rab3ip1|Rim|Serg1	regulating synaptic membrane exocytosis 1	protein-coding	0.010000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-2281	chr5	80502874	80503074	+	1.17062	NA	Intergenic	Intergenic	-517597	NM_001347368	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Adgrl3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|Lphn3|mKIAA0768	adhesion G protein-coupled receptor L3	protein-coding	0.000000	0.308458			
ePOU_nocontrol_ChIP_peaks_unique-2412	chr6	34220217	34220417	+	1.17062	NA	Intergenic	Intergenic	-43263	NM_021435	58246	Mm.245527	NM_021435	ENSMUSG00000018999	Slc35b4	4930474D06Rik|AB041549|AW494345	solute carrier family 35, member B4	protein-coding	0.020000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-1403	chr17	85646025	85646225	+	1.17062	NA	Intergenic	Intergenic	25291	NM_011381	20473	Mm.370208	NM_011381	ENSMUSG00000038805	Six3	E130112M24Rik|Six3a|Six3alpha|Six3b|Six3beta	sine oculis-related homeobox 3	protein-coding	0.040000	0.442786			8(TTTAGCACGAGAAAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2493	chr6	101435664	101435864	+	1.17062	NA	Intergenic	L1_Mur3|LINE|L1	-57867	NM_018884	55983	Mm.321654	NM_018884	ENSMUSG00000035357	Pdzrn3	1110020C07Rik|AI429718|AL023082|LNX3|SEMACAP3|Semcap3	PDZ domain containing RING finger 3	protein-coding	0.000000	0.248756			-82(GATTTGGTTTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2597	chr7	67168854	67169054	+	1.17062	NA	Intergenic	Intergenic	53504	NR_131044	76628	Mm.384589	NR_131043	ENSMUSG00000097527	1700112J16Rik	-	RIKEN cDNA 1700112J16 gene	ncRNA	0.005000	0.388060			12(GTTTTACAATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-582	chr11	100931222	100931422	+	1.17062	NA	intron (NM_213659, intron 1 of 23)	intron (NM_213659, intron 1 of 23)	8218	NM_011486	20848	Mm.249934	NM_011486	ENSMUSG00000004040	Stat3	1110034C02Rik|AW109958|Aprf	signal transducer and activator of transcription 3	protein-coding	0.010000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-1065	chr15	12739834	12740034	+	1.17062	NA	promoter-TSS (NM_001081064)	promoter-TSS (NM_001081064)	-42	NM_001081064	68070	Mm.423205	NM_001081064	ENSMUSG00000022197	Pdzd2	4930537L06Rik|A930022H17Rik|Gm21706|Gm82|Pdzk3	PDZ domain containing 2	protein-coding	0.090000	0.696517			
ePOU_nocontrol_ChIP_peaks_unique-1239	chr16	40708799	40708999	+	1.17062	NA	intron (NM_001361281, intron 1 of 8)	intron (NM_001361281, intron 1 of 8)	724535	NM_001361281	268890	Mm.310524	NM_175548	ENSMUSG00000061080	Lsamp	5430428I19|AW046674|B130007O04Rik|D930023J12Rik|Gm29907|Lam|Lamp	limbic system-associated membrane protein	protein-coding	0.000000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-144	chr1	134189026	134189226	+	1.17062	NA	intron (NM_007695, intron 8 of 9)	intron (NM_007695, intron 8 of 9)	-4322	NM_001357515	53311	Mm.379067	NM_016749	ENSMUSG00000042451	Mybph	AI385643|MyBP-H	myosin binding protein H	protein-coding	0.015000	0.502488		-44(CATAAATTTGCATG,+,0.00),-44(CATAAATTTGCATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2550	chr7	13278629	13278829	+	1.17062	NA	promoter-TSS (NM_010715)	promoter-TSS (NM_010715)	-8	NM_177312	321008	Mm.458832	NM_177312	ENSMUSG00000070814	Zswim9	6330408A02Rik	zinc finger SWIM-type containing 9	protein-coding	0.070000	0.661692			
Oct4_nocontrol_ChIP_peaks_unique-2	chr1	119968883	119969083	+	1.17062	NA	intron (NM_001115074, intron 6 of 23)	intron (NM_001115074, intron 6 of 23)	28249	NM_001115074	226356	Mm.297290	NM_001115074	ENSMUSG00000036962	Cfap221	Gm101|Pcdp1	cilia and flagella associated protein 221	protein-coding	0.005000	0.442786		-6(AATGCATATTCATG,+,0.00),-6(AATGCATATTCATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-139	chr1	131867019	131867219	+	1.17062	NA	promoter-TSS (NM_144875)	promoter-TSS (NM_144875)	-158	NM_144875	226422	Mm.34027	NM_144875	ENSMUSG00000026433	Rab29	Rab7l1	RAB29, member RAS oncogene family	protein-coding	0.030000	0.398010			-32(AAACTTTTATGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1097	chr15	41539132	41539332	+	1.17062	NA	intron (NR_152565, intron 2 of 17)	intron (NR_152565, intron 2 of 17)	90129	NM_001358977	170719	Mm.254267	NM_130885	ENSMUSG00000022307	Oxr1	2210416C20Rik|C7|C7B	oxidation resistance 1	protein-coding	0.010000	0.318408			
Oct4_nocontrol_ChIP_peaks_unique-99	chr9	20459834	20460034	+	1.17062	NA	5' UTR (NM_001357809, exon 1 of 10)	5' UTR (NM_001357809, exon 1 of 10)	226	NM_011753	22688	Mm.107441	NM_011753	ENSMUSG00000063108	Zfp26	5033428C05Rik|KRAB15|Zfp-26|Zfp70|Zfp81-rs1|mKIAA4196|mkr-3|mszf14|mszf52	zinc finger protein 26	protein-coding	0.080000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-2876	chr9	54950785	54950985	+	1.17062	NA	promoter-TSS (NM_145229)	promoter-TSS (NM_145229)	26	NM_011966	26441	Mm.30270	NM_011966	ENSMUSG00000032301	Psma4	C9	proteasome (prosome, macropain) subunit, alpha type 4	protein-coding	0.090000	0.656716			
ePOU_nocontrol_ChIP_peaks_unique-2014	chr3	143455589	143455789	+	1.17062	NA	Intergenic	Intergenic	212634	NR_040551	320072	Mm.136397	NR_040551	ENSMUSG00000105923	A830019L24Rik	-	RIKEN cDNA A830019L24 gene	ncRNA	0.010000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-100	chr1	87313918	87314118	+	1.17062	NA	Intergenic	Intergenic	-12980	NM_001110212	227331	Mm.23065	NM_146112	ENSMUSG00000048000	Gigyf2	2610016F01Rik|A830080H02Rik|AI852361|AW259676|BC006835|Tnrc15|mKIAA0642	GRB10 interacting GYF protein 2	protein-coding	0.000000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-1967	chr3	100826634	100826834	+	1.17062	NA	intron (NM_178594, intron 1 of 5)	intron (NM_178594, intron 1 of 5)	1275	NM_178594	242122	Mm.137467	NM_178594	ENSMUSG00000051076	Vtcn1	B7h4|B7s1|B7x|BC032925	V-set domain containing T cell activation inhibitor 1	protein-coding	0.020000	0.567164			
ePOU_nocontrol_ChIP_peaks_unique-2195	chr5	8423362	8423562	+	1.17062	NA	promoter-TSS (NM_001190717)	promoter-TSS (NM_001190717)	624	NM_001289596	319653	Mm.146262	NM_178766	ENSMUSG00000054099	Slc25a40	B230315F11Rik	solute carrier family 25, member 40	protein-coding	0.010000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-1644	chr2	24949737	24949937	+	1.17062	NA	promoter-TSS (NM_147179)	promoter-TSS (NM_147179)	60	NM_026021	67187	Mm.296106	NM_026021	ENSMUSG00000026974	Zmynd19	2700064H14Rik|AA536891|AU014915|mizip	zinc finger, MYND domain containing 19	protein-coding	0.170000	0.825871			
ePOU_nocontrol_ChIP_peaks_unique-1592	chr19	47537104	47537304	+	1.17062	NA	promoter-TSS (NM_175360)	promoter-TSS (NM_175360)	-85	NM_175360	108689	Mm.218048	NM_175360	ENSMUSG00000042694	Stn1	0610009H20Rik|2310057J23Rik|AAF-44|AAF44|AI413458|Obfc1|RPA-32	STN1, CST complex subunit	protein-coding	0.085000	0.636816			
ePOU_nocontrol_ChIP_peaks_unique-806	chr13	25869501	25869701	+	1.17062	NA	Intergenic	Intergenic	96715	NR_045062	100503530	Mm.86763	NR_045062	ENSMUSG00000086531	Gm11351	-	predicted gene 11351	ncRNA	0.010000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-757	chr12	100257565	100257765	+	1.17062	NA	Intergenic	Intergenic	-18944	NR_045741	100038713	Mm.470751	NR_045741	ENSMUSG00000113679	Gm10432	-	predicted gene 10432	ncRNA	0.000000	0.298507			28(ATTTACATGACAAAAT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-117	chr1	104758228	104758428	+	1.17062	NA	Intergenic	Intergenic	-10192	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding	0.000000	0.283582		-68(TATCAATAAGCATA,+,0.00)	-5(GTCAGAATAACAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-988	chr14	64652640	64652840	+	1.17062	NA	intron (NM_001081177, intron 1 of 39)	CpG	199	NM_001081177	16554	Mm.23611	NM_001081177	ENSMUSG00000060012	Kif13b	5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN	kinesin family member 13B	protein-coding	0.125000	0.746269			
ePOU_nocontrol_ChIP_peaks_unique-416	chr11	6444451	6444651	+	1.17062	NA	promoter-TSS (NM_029938)	promoter-TSS (NM_029938)	-108	NM_029938	77605	Mm.27624	NM_029938	ENSMUSG00000041126	H2afv	C530002L11Rik|H2A.Z2|H2a.z-2|H2av|Tg(Wnt1-cre)11Rth|Wnt1-Cre|Wnt1::Cre|Wnt1cre	H2A histone family, member V	protein-coding	0.085000	0.592040			
ePOU_nocontrol_ChIP_peaks_unique-440	chr11	23084832	23085032	+	1.17062	NA	Intergenic	MTB-int|LTR|ERVL-MaLR	-67208	NR_131065	76993	Mm.59224	NR_131065	ENSMUSG00000086366	1700061J23Rik	-	RIKEN cDNA 1700061J23 gene	ncRNA	0.000000	0.402985			
Oct4_nocontrol_ChIP_peaks_unique-52	chr19	44931243	44931443	+	1.17062	NA	exon (NM_001081225, exon 1 of 20)	exon (NM_001081225, exon 1 of 20)	224	NM_172638	226151	Mm.212609	NM_172638	ENSMUSG00000036097	Slf2	3632432H19|Fam178a	SMC5-SMC6 complex localization factor 2	protein-coding	0.090000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-2819	chr8	126539844	126540044	+	1.17062	NA	Intergenic	Intergenic	54042	NM_001164598	270110	Mm.334918	NM_001164598	ENSMUSG00000051495	Irf2bp2	E130305N23Rik|IRF-2BP2	interferon regulatory factor 2 binding protein 2	protein-coding	0.020000	0.552239			
ePOU_nocontrol_ChIP_peaks_unique-1331	chr17	27016861	27017061	+	1.17062	NA	Intergenic	Intergenic	-1074	NM_001251881	70772	Mm.440437	NM_027544	ENSMUSG00000048731	Ggnbp1	0610031G08Rik|mdf	gametogenetin binding protein 1	protein-coding	0.020000	0.353234			-23(ATTTACAAGTCAAATG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2275	chr5	76529191	76529391	+	1.17062	NA	promoter-TSS (NM_001359373)	promoter-TSS (NM_001359373)	-16	NM_001359372	69940	Mm.403233	NM_027270	ENSMUSG00000036435	Exoc1	2810407P21Rik|A730011E05Rik|SEC3|Sec3l1|Sec3p	exocyst complex component 1	protein-coding	0.050000	0.562189			
ePOU_nocontrol_ChIP_peaks_unique-2066	chr4	31963891	31964091	+	1.17062	NA	promoter-TSS (NM_172688)	promoter-TSS (NM_172688)	-116	NM_172688	26409	Mm.258589	NM_009316	ENSMUSG00000028284	Map3k7	B430101B05|C87327|Tak1	mitogen-activated protein kinase kinase kinase 7	protein-coding	0.105000	0.681592			
ePOU_nocontrol_ChIP_peaks_unique-953	chr14	34453938	34454138	+	1.17062	NA	intron (NM_009758, intron 2 of 12)	intron (NM_009758, intron 2 of 12)	48508	NM_009758	12166	Mm.237825	NM_009758	ENSMUSG00000021796	Bmpr1a	1110037I22Rik|ALK-3|ALK3|AU045487|BMPR-1A|BMPR-IA|Bmpr|SKR5	bone morphogenetic protein receptor, type 1A	protein-coding	0.020000	0.427861			-71(ATTAGCATAAGAATAT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1776	chr2	130827239	130827439	+	1.17062	NA	intron (NM_029432, intron 1 of 36)	intron (NM_029432, intron 1 of 36)	12348	NM_001311147	228602	Mm.271990	NM_028367	ENSMUSG00000027309	4930402H24Rik	2810487F15Rik|AI413763|C78926	RIKEN cDNA 4930402H24 gene	protein-coding	0.010000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-1041	chr14	120416597	120416797	+	1.17062	NA	intron (NM_207515, intron 7 of 7)	intron (NM_207515, intron 7 of 7)	-61764	NM_029519	76108	Mm.261448	NM_029519	ENSMUSG00000051615	Rap2a	5830461H18Rik	RAS related protein 2a	protein-coding	0.010000	0.318408			
ePOU_nocontrol_ChIP_peaks_unique-2319	chr5	110978483	110978683	+	1.17062	NA	intron (NM_001267622, intron 2 of 22)	intron (NM_001267622, intron 2 of 22)	-25561	NR_030482	735278		NR_030482	ENSMUSG00000076163	Mir701	Mirn701|mir-701|mmu-mir-701	microRNA 701	ncRNA	0.030000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-1368	chr17	55931892	55932092	+	1.17062	NA	Intergenic	Intergenic	13267	NM_146249	240120	Mm.441018	NM_146249	ENSMUSG00000062101	Zfp119b	-	zinc finger protein 119b	protein-coding	0.045000	0.631841			
ePOU_nocontrol_ChIP_peaks_unique-2929	chr9	94558986	94559186	+	1.17062	NA	Intergenic	RMER15-int|LTR|ERVL	-21005	NM_001033145	68861	Mm.258746	NM_001033145	ENSMUSG00000045414	Dipk2a	1190002N15Rik|GoPro49|HASF	divergent protein kinase domain 2A	protein-coding	0.005000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-106	chr1	91400898	91401098	+	1.17062	NA	Intergenic	L1MC|LINE|L1	-2175	NM_023343	67444	Mm.337240	NM_023343	ENSMUSG00000026309	Ilkap	0710007A14Rik|1600009O09Rik|PP2C-DELTA	integrin-linked kinase-associated serine/threonine phosphatase 2C	protein-coding	0.005000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-2230	chr5	34573576	34573776	+	1.17062	NA	promoter-TSS (NM_001331086)	promoter-TSS (NM_001331086)	12	NM_001331082	11518	Mm.289106	NM_013457	ENSMUSG00000029106	Add1	AI256389	adducin 1 (alpha)	protein-coding	0.070000	0.661692			
ePOU_nocontrol_ChIP_peaks_unique-1323	chr17	23924560	23924760	+	1.17062	NA	Intergenic	CpG	7202	NM_001077633	620253	Mm.390964	NM_001077633	ENSMUSG00000057417	Dcpp3	Dcpp-3|EG620253|SPT-3	demilune cell and parotid protein 3	protein-coding	0.080000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-958	chr14	45540055	45540255	+	1.17062	NA	Intergenic	Intergenic	-3555	NR_045809	67651	Mm.55930	NR_045809	ENSMUSG00000115324	4930527F14Rik	-	RIKEN cDNA 4930527F14 gene	ncRNA	0.005000	0.472637			
ePOU_nocontrol_ChIP_peaks_unique-2305	chr5	105563137	105563337	+	1.17062	NA	intron (NM_133897, intron 2 of 3)	L1_Mus2|LINE|L1	43766	NM_133897	100604	Mm.319847	NM_133897	ENSMUSG00000054720	Lrrc8c	AD158|AI326115|E430036I04Rik|fad158	leucine rich repeat containing 8 family, member C	protein-coding	0.005000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-153	chr1	143375162	143375362	+	1.17062	NA	Intergenic	Lx6|LINE|L1	-265435	NM_020025	26878	Mm.285580	NM_020025	ENSMUSG00000033849	B3galt2	-	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	protein-coding	0.000000	0.318408			
ePOU_nocontrol_ChIP_peaks_unique-2199	chr5	17766100	17766300	+	1.17062	NA	Intergenic	Intergenic	69696	NM_001159555	12491	Mm.18628	NM_007643	ENSMUSG00000002944	Cd36	FAT|GPIV|Scarb3	CD36 molecule	protein-coding	0.005000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-686	chr12	52673945	52674145	+	1.17062	NA	Intergenic	Intergenic	-25338	NM_198111	238161	Mm.310822	NM_198111	ENSMUSG00000061603	Akap6	AI482140|Akapalpha|Akapbeta|PRKA	A kinase (PRKA) anchor protein 6	protein-coding	0.010000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-213	chr1	181144160	181144360	+	1.17062	NA	promoter-TSS (NM_026171)	promoter-TSS (NM_026171)	-56	NM_026171	67459	Mm.263464	NM_026171	ENSMUSG00000026516	Nvl	1200009I24Rik	nuclear VCP-like	protein-coding	0.095000	0.646766			
Oct4_nocontrol_ChIP_peaks_unique-102	chr9	66795605	66795805	+	1.17062	NA	promoter-TSS (NM_177583)	promoter-TSS (NM_177583)	-282	NM_177583	208117	Mm.41291	NM_177583	ENSMUSG00000032375	Aph1b	2310057K14Rik|Aph1c	aph1 homolog B, gamma secretase subunit	protein-coding	0.060000	0.641791			
merged_common-23	chr10	74352429	74352629	+	1.17062	NA	intron (NM_001142737, intron 14 of 30)	intron (NM_001142737, intron 14 of 30)	530662	NM_001142747	11994	Mm.338933	NM_023115	ENSMUSG00000052613	Pcdh15	BB078305|Gm9815|Ush1f|av|nmf19|roda	protocadherin 15	protein-coding	0.005000	0.388060			-22(TCATTTTATTGTTAAT,+,0.00)
merged_common-191	chr5	57757575	57757775	+	1.17062	NA	intron (NM_001310608, intron 1 of 3)	L2b|LINE|L2	39594	NM_001310606	54216	Mm.332387	NM_018764	ENSMUSG00000029108	Pcdh7	-	protocadherin 7	protein-coding	0.005000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-2029	chr3	151567370	151567570	+	1.17062	NA	Intergenic	Intergenic	129588	NM_133222	170757	Mm.317261	NM_133222	ENSMUSG00000039167	Adgrl4	1110033N21Rik|ETL1|Eltd1|Etl	adhesion G protein-coupled receptor L4	protein-coding	0.010000	0.303483			-20(ATTTAAATAATAATAG,-,0.00),55(GTTTGAAAAAGAAAAT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-329	chr10	66911575	66911775	+	1.17062	NA	TTS (NR_138560)	TTS (NR_138560)	8709	NR_138560	68488	Mm.338835	NR_138560		1110002J07Rik	-	RIKEN cDNA 1110002J07 gene	ncRNA	0.005000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-1634	chr2	18998008	18998208	+	1.17062	NA	promoter-TSS (NM_001355148)	promoter-TSS (NM_001355148)	13	NM_001355146	18718	Mm.313977	NM_008845	ENSMUSG00000026737	Pip4k2a	AW742916|Pip5k2a	phosphatidylinositol-5-phosphate 4-kinase, type II, alpha	protein-coding	0.160000	0.820896			
ePOU_nocontrol_ChIP_peaks_unique-1752	chr2	116096438	116096638	+	1.17062	NA	Intergenic	Intergenic	-20442	NR_033447	69974	Mm.440293	NR_033447		2810405F15Rik	-	RIKEN cDNA 2810405F15 gene	ncRNA	0.005000	0.288557		66(TTTGAATATTCATG,+,0.00),66(TTTGAATATTCATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2939	chr9	106318225	106318425	+	1.17062	NA	intron (NM_027354, intron 9 of 10)	intron (NM_027354, intron 9 of 10)	37264	NM_027354	70235	Mm.23054	NM_027354	ENSMUSG00000023345	Poc1a	2510040D07Rik|Wdr51a|cha	POC1 centriolar protein A	protein-coding	0.005000	0.472637			
ePOU_nocontrol_ChIP_peaks_unique-466	chr11	40500213	40500413	+	1.17062	NA	Intergenic	Intergenic	192369	NM_134017	108645	Mm.293771	NM_134017	ENSMUSG00000042032	Mat2b	1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR	methionine adenosyltransferase II, beta	protein-coding	0.000000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-1166	chr15	99702033	99702233	+	1.17062	NA	promoter-TSS (NM_031842)	promoter-TSS (NM_031842)	-154	NM_031842	83797	Mm.273756	NM_031842	ENSMUSG00000023018	Smarcd1	AA407987|Baf60a|D15Kz1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	protein-coding	0.105000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-544	chr11	84043337	84043537	+	1.17062	NA	3' UTR (NM_194341, exon 20 of 20)	3' UTR (NM_194341, exon 20 of 20)	24920	NM_019819	56405	Mm.240885	NM_019819	ENSMUSG00000018648	Dusp14	1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6	dual specificity phosphatase 14	protein-coding	0.015000	0.447761			-41(CCTTTACCATGAAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1502	chr18	78768380	78768580	+	1.17062	NA	intron (NM_053099, intron 5 of 5)	intron (NM_053099, intron 5 of 5)	-171530	NM_207651	27411	Mm.44158	NM_030683	ENSMUSG00000024552	Slc14a2	UT-A1|UT-A3	solute carrier family 14 (urea transporter), member 2	protein-coding	0.010000	0.422886			-48(ACTTGCATGAGAAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2632	chr7	99182805	99183005	+	1.17062	NA	promoter-TSS (NM_026384)	promoter-TSS (NM_026384)	-192	NM_026384	67800	Mm.180189	NM_026384	ENSMUSG00000030747	Dgat2	0610010B06Rik|ARAT|DGAT-2	diacylglycerol O-acyltransferase 2	protein-coding	0.045000	0.557214			
ePOU_nocontrol_ChIP_peaks_unique-356	chr10	81285832	81286032	+	1.17062	NA	promoter-TSS (NM_001282096)	promoter-TSS (NM_001282096)	-151	NM_001282096	27375	Mm.27984	NM_013769	ENSMUSG00000034917	Tjp3	-	tight junction protein 3	protein-coding	0.120000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-1130	chr15	74691707	74691907	+	1.17062	NA	Intergenic	Intergenic	-17354	NR_033197	66769	Mm.482908	NM_025756	ENSMUSG00000044276	4933427E11Rik	-	RIKEN cDNA 4933427E11 gene	ncRNA	0.005000	0.328358			
ePOU_nocontrol_ChIP_peaks_unique-1640	chr2	22940931	22941131	+	1.17062	NA	TTS (NM_019501)	TTS (NM_019501)	45509	NM_019501	56075	Mm.249752	NM_019501	ENSMUSG00000026784	Pdss1	2610203G20Rik|2700031G06Rik|TPT|TPT 1|Tprt|mDLP1|mSPS1	prenyl (solanesyl) diphosphate synthase, subunit 1	protein-coding	0.005000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-826	chr13	44694314	44694514	+	1.17062	NA	Intergenic	Intergenic	-36360	NM_021878	16468	Mm.25059	NM_021878	ENSMUSG00000038518	Jarid2	Jmj|jumonji	jumonji, AT rich interactive domain 2	protein-coding	0.010000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-2780	chr8	90954887	90955087	+	1.17062	NA	intron (NM_177224, intron 3 of 39)	intron (NM_177224, intron 3 of 39)	22738	NM_001310530	109151	Mm.100615	NM_177224	ENSMUSG00000056608	Chd9	1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|PRIC320|mKIAA0308	chromodomain helicase DNA binding protein 9	protein-coding	0.020000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-759	chr12	101029161	101029361	+	1.17062	NA	promoter-TSS (NM_026681)	promoter-TSS (NM_026681)	-370	NM_001362342	68339	Mm.156217	NM_026681	ENSMUSG00000021182	Ccdc88c	0610010D24Rik|AV000935|AW324073|Daple|mKIAA1509	coiled-coil domain containing 88C	protein-coding	0.075000	0.656716			
Oct4_nocontrol_ChIP_peaks_unique-26	chr13	36297555	36297755	+	1.17062	NA	intron (NM_001039189, intron 3 of 5)	intron (NM_001039189, intron 3 of 5)	180012	NM_024274	69955	Mm.70690	NM_024274	ENSMUSG00000021420	Fars2	Fars1|pheRS	phenylalanine-tRNA synthetase 2 (mitochondrial)	protein-coding	0.010000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-2634	chr7	99783482	99783682	+	1.17062	NA	Intergenic	L1MB4|LINE|L1	16418	NM_146356	258353	Mm.377450	NM_146356	ENSMUSG00000073997	Olfr521	MOR101-2	olfactory receptor 521	protein-coding	0.030000	0.402985			-88(CCTCTGTGATATAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1422	chr18	10733379	10733579	+	1.17062	NA	intron (NM_001364997, intron 1 of 21)	intron (NM_001364997, intron 1 of 21)	7854	NM_001364997	225164	Mm.21500	NM_144860	ENSMUSG00000024294	Mib1	DIP-1|E430019M12Rik|Mib	mindbomb E3 ubiquitin protein ligase 1	protein-coding	0.000000	0.388060			19(ATTTTTTTATGTACAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1110	chr15	57102713	57102913	+	1.17062	NA	Intergenic	Intergenic	162348	NM_001357930	210463	Mm.26555	NM_172378	ENSMUSG00000022366	Slc22a22	oat-pg	solute carrier family 22 (organic cation transporter), member 22	protein-coding	0.005000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-1053	chr15	4171472	4171672	+	1.17062	NA	Intergenic	Intergenic	-144166	NR_028266	414066	Mm.394461	NR_028266		BC037032	-	cDNA Sequence BC037032	ncRNA	0.000000	0.353234			3(GCTTTGTTTTTGAAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1796	chr2	139787998	139788198	+	1.17062	NA	Intergenic	Intergenic	109920	NM_001276489	319909	Mm.41113	NM_001126490	ENSMUSG00000074766	Ism1	5430433G21Rik|Ism	isthmin 1, angiogenesis inhibitor	protein-coding	0.030000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-2700	chr8	22878524	22878724	+	1.17062	NA	intron (NM_001081149, intron 3 of 17)	(TCTCTG)n|Simple_repeat|Simple_repeat	19078	NM_001081149	244349	Mm.182776	NM_001081149	ENSMUSG00000031540	Kat6a	1500036M03|9930021N24Rik|MOZ|Myst3|Zfp220	K(lysine) acetyltransferase 6A	protein-coding	0.005000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-2845	chr9	22095975	22096175	+	1.17062	NA	Intergenic	Intergenic	-3178	NM_009922	12797	Mm.4356	NM_009922	ENSMUSG00000001349	Cnn1	CN|CnnI	calponin 1	protein-coding	0.070000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-929	chr14	20082804	20083004	+	1.17062	NA	exon (NM_026209, exon 1 of 2)	exon (NM_026209, exon 1 of 2)	268	NM_026209	67509	Mm.292423	NM_026209	ENSMUSG00000045107	Saysd1	1810063B07Rik|4930488P03Rik	SAYSVFN motif domain containing 1	protein-coding	0.080000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-539	chr11	80655251	80655451	+	1.17062	NA	intron (NM_177390, intron 14 of 21)	intron (NM_177390, intron 14 of 21)	124674	NM_177390	338367	Mm.151948	NM_177390	ENSMUSG00000035441	Myo1d	9930104H07Rik|AW544947|D11Ertd9e|myosin-1d	myosin ID	protein-coding	0.010000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-189	chr1	170644321	170644521	+	1.17062	NA	promoter-TSS (NM_177068)	promoter-TSS (NM_177068)	-111	NM_177068	320078	Mm.287131	NM_177068	ENSMUSG00000038463	Olfml2b	1110018N05Rik|4832415H08Rik|AI467542	olfactomedin-like 2B	protein-coding	0.105000	0.731343			
ePOU_nocontrol_ChIP_peaks_unique-1521	chr19	5529440	5529640	+	1.17062	NA	Intergenic	Intergenic	-19023	NM_001362042	225861	Mm.20071	NM_001024560	ENSMUSG00000056185	Snx32	B930037P14Rik|Snx6b	sorting nexin 32	protein-coding	0.050000	0.611940			
ePOU_nocontrol_ChIP_peaks_unique-275	chr10	24885919	24886119	+	1.17062	NA	intron (NM_001166416, intron 11 of 29)	B1F1|SINE|Alu	16033	NM_027347	70208	Mm.28020	NM_027347	ENSMUSG00000019984	Med23	130kDa|3000002A17Rik|Crsp3|ESTM7|Sur2|X83317|mKIAA1216	mediator complex subunit 23	protein-coding	0.010000	0.447761			
ePOU_nocontrol_ChIP_peaks_unique-1140	chr15	80143894	80144094	+	1.17062	NA	intron (NM_025609, intron 1 of 10)	intron (NM_025609, intron 1 of 10)	10848	NM_025609	66513	Mm.288245	NM_025609	ENSMUSG00000022414	Tab1	2310012M03Rik|Map3k7ip1|b2b449Clo	TGF-beta activated kinase 1/MAP3K7 binding protein 1	protein-coding	0.030000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-927	chr14	17457957	17458157	+	1.17062	NA	Intergenic	LTR101_Mam|LTR|ERVL	-202903	NM_001113417	21834	Mm.32563	NM_009380	ENSMUSG00000021779	Thrb	Nr1a2|T3R[b]|T3Rbeta|Thrb1|Thrb2|c-erbAbeta	thyroid hormone receptor beta	protein-coding	0.005000	0.437811		-69(CATGCATATTCAAA,+,0.00),-69(CATGCATATTCAAA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1713	chr2	75938467	75938667	+	1.17062	NA	promoter-TSS (NM_028235)	promoter-TSS (NM_028235)	-105	NM_028235	72421	Mm.275109	NM_028235	ENSMUSG00000075273	Ttc30b	2510042P03Rik|Tcc30b	tetratricopeptide repeat domain 30B	protein-coding	0.050000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-2639	chr7	105640469	105640669	+	1.17062	NA	promoter-TSS (NM_029802)	promoter-TSS (NM_029802)	124	NM_001360058	14356	Mm.220330	NM_019502	ENSMUSG00000089847	Timm10b	Fxc1|Tim10b|Tim9b	translocase of inner mitochondrial membrane 10B	protein-coding	0.065000	0.626866			
Oct4_nocontrol_ChIP_peaks_unique-78	chr5	143527823	143528023	+	1.17062	NA	promoter-TSS (NM_009007)	promoter-TSS (NM_009007)	70	NM_009007	19353	Mm.292510	NM_009007	ENSMUSG00000001847	Rac1	AL023026|D5Ertd559e	Rac family small GTPase 1	protein-coding	0.130000	0.741294			
ePOU_nocontrol_ChIP_peaks_unique-2393	chr6	17522036	17522236	+	1.17062	NA	intron (NM_008591, intron 4 of 21)	intron (NM_008591, intron 4 of 21)	58179	NM_008591	17295	Mm.86844	NM_008591	ENSMUSG00000009376	Met	AI838057|HGF|HGFR|Par4|c-Met	met proto-oncogene	protein-coding	0.005000	0.343284			-25(ATCTCCATGACAACAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1494	chr18	71520085	71520285	+	1.17062	NA	intron (NM_007831, intron 12 of 28)	intron (NM_007831, intron 12 of 28)	830884	NM_007831	13176	Mm.167882	NM_007831	ENSMUSG00000060534	Dcc	C030036D22Rik|Igdcc1	deleted in colorectal carcinoma	protein-coding	0.000000	0.293532			-78(ATTAGCATTAGAATAA,-,0.00),-72(ATTAGAATAAAAAGAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1217	chr16	31702277	31702477	+	1.17062	NA	intron (NM_001357281, intron 1 of 22)	intron (NM_001357281, intron 1 of 22)	6829	NM_001357281	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs large MAGUK scaffold protein 1	protein-coding	0.010000	0.323383			39(ACTTTGTCATTTTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2875	chr9	54489321	54489521	+	1.17062	NA	intron (NM_172771, intron 1 of 43)	intron (NM_172771, intron 1 of 43)	12205	NM_172771	235380	Mm.93636	NM_172771	ENSMUSG00000041268	Dmxl2	6330586A12|6430411K14Rik|E130119P06Rik|mKIAA0856	Dmx-like 2	protein-coding	0.000000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-3002	chrX	166663280	166663480	+	1.17062	NA	intron (NR_046015, intron 2 of 8)	intron (NR_046015, intron 2 of 8)	1355	NR_046015	382255	Mm.336320	NR_046015	ENSMUSG00000086860	Gm1720	-	predicted gene 1720	ncRNA	0.005000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-2605	chr7	73744475	73744675	+	1.17062	NA	intron (NM_001162532, intron 1 of 2)	intron (NM_001162532, intron 1 of 2)	4268	NM_001162532	100038347	Mm.425464	NM_001162532	ENSMUSG00000078670	Fam174b	-	family with sequence similarity 174, member B	protein-coding	0.015000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-709	chr12	75669792	75669992	+	1.17062	NA	promoter-TSS (NM_028203)	promoter-TSS (NM_028203)	-355	NM_028203	72338	Mm.341719	NM_028203	ENSMUSG00000045690	Wdr89	2600001A11Rik	WD repeat domain 89	protein-coding	0.065000	0.512438			
ePOU_nocontrol_ChIP_peaks_unique-748	chr12	96745588	96745788	+	1.17062	NA	Intergenic	Lx9|LINE|L1	-698466	NR_103800	69423	Mm.46121	NM_027076		1700019M22Rik	-	NFX-like protein	pseudo	0.000000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-2998	chrX	144557488	144557688	+	1.17062	NA	intron (NM_009428, intron 1 of 10)	intron (NM_009428, intron 1 of 10)	-1349	NR_033647	100039436	Mm.483818	NM_001111315		Mageb16-ps1	EG623523|Gm15072|Mageb16	melanoma antigen family B, 16, pseudogene 1	pseudo	0.005000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-2748	chr8	69996281	69996481	+	1.17062	NA	promoter-TSS (NM_145596)	promoter-TSS (NM_145596)	3	NM_145596	234366	Mm.270044	NM_145596	ENSMUSG00000036180	Gatad2a	1110066C11Rik|BC031407|C80248	GATA zinc finger domain containing 2A	protein-coding	0.085000	0.681592			
ePOU_nocontrol_ChIP_peaks_unique-421	chr11	11169806	11170006	+	1.17062	NA	intron (NM_177033, intron 3 of 3)	intron (NM_177033, intron 3 of 3)	55890	NM_177033	319922	Mm.337851	NM_177033	ENSMUSG00000050830	Vwc2	A930041G11Rik|G11|PSST739|UNQ739|cradin	von Willebrand factor C domain containing 2	protein-coding	0.000000	0.368159			59(ATCAGAATAACAAGAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-556	chr11	86910464	86910664	+	1.17062	NA	Intergenic	ID4|SINE|ID	-57906	NR_162780	114483630		NR_162780		Mir12182	mmu-mir-12182	microRNA mir-12182	ncRNA	0.005000	0.432836			-70(AATTTGGAATGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-150	chr1	136674837	136675037	+	1.17062	NA	Intergenic	Intergenic	-8459	NR_045324	100503460	Mm.30630	NR_045324	ENSMUSG00000097113	Gm19705	-	predicted gene, 19705	ncRNA	0.020000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-1355	chr17	42509875	42510075	+	1.17062	NA	Intergenic	Intergenic	101338	NM_181753	353344	Mm.184937	NM_181753	ENSMUSG00000043972	Opn5	Gpr136|Neuropsin|PGR12|TMEM13	opsin 5	protein-coding	0.010000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-2161	chr4	133756784	133756984	+	1.17062	NA	promoter-TSS (NM_001363070)	promoter-TSS (NM_001363070)	-115	NM_001363070	93760	Mm.22478	NM_001080819	ENSMUSG00000007880	Arid1a	1110030E03Rik|BAF250a|Osa1|Smarcf1	AT rich interactive domain 1A (SWI-like)	protein-coding	0.085000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-1567	chr19	35123798	35123998	+	1.17062	NA	Intergenic	Intergenic	158502	NR_035473	100316775		NR_035473	ENSMUSG00000089151	Mir1950	mmu-mir-1950	microRNA 1950	ncRNA	0.000000	0.238806	-28(TTTGAATTATTCATA,+,0.00),-28(TTTGAATTATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2446	chr6	61080599	61080799	+	1.17062	NA	Intergenic	Intergenic	-99626	NM_001164316	232035	Mm.150324	NM_183310	ENSMUSG00000039578	Ccser1	6230405M12Rik|C130092O11Rik|Fam190a	coiled-coil serine rich 1	protein-coding	0.015000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-103	chr1	90481776	90481976	+	1.17062	NA	Intergenic	Intergenic	-121549	NM_133805	108679	Mm.119177	NM_133805	ENSMUSG00000034432	Cops8	9430009J09Rik|AA408242|Csn8|Sgn8	COP9 signalosome subunit 8	protein-coding	0.010000	0.482587			-87(TGTTTGGTTTGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2814	chr8	124289792	124289992	+	1.17062	NA	intron (NM_139272, intron 1 of 15)	L1ME4c|LINE|L1	58498	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	polypeptide N-acetylgalactosaminyltransferase 2	protein-coding	0.010000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-342	chr10	76303675	76303875	+	1.17062	NA	intron (NM_001081419, intron 8 of 37)	intron (NM_001081419, intron 8 of 37)	41516	NM_001081419	64451	Mm.33183	NM_001081419	ENSMUSG00000020231	Dip2a	4931420H10Rik|AI426328|Dip2|Kiaa0184-hp|mKIAA0184	disco interacting protein 2 homolog A	protein-coding	0.010000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-629	chr11	120232904	120233104	+	1.17062	NA	promoter-TSS (NM_001347621)	promoter-TSS (NM_001347621)	57	NM_001347621	268515	Mm.309498	NM_198423	ENSMUSG00000039741	Bahcc1	B930044J06|BC060615	BAH domain and coiled-coil containing 1	protein-coding	0.045000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-894	chr13	106391078	106391278	+	1.17062	NA	Intergenic	RCHARR1|DNA|hAT-Charlie	545780	NM_029665	76582	Mm.132208	NM_029665	ENSMUSG00000042590	Ipo11	1700081H05Rik|2510001A17Rik|AI314624|AW555235|E330021B14Rik|Ranbp11	importin 11	protein-coding	0.000000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-1708	chr2	73386544	73386744	+	1.17062	NA	promoter-TSS (NM_001190297)	promoter-TSS (NM_001190297)	-164	NM_001276444	68526	Mm.451014	NM_001080707	ENSMUSG00000041762	Gpr155	1110017O10Rik|DEPDC3|F730029F15Rik|PGR22	G protein-coupled receptor 155	protein-coding	0.065000	0.706468			
ePOU_nocontrol_ChIP_peaks_unique-2463	chr6	76836157	76836357	+	1.17062	NA	Intergenic	Intergenic	-406220	NR_155299	74342	Mm.292568	NM_028880	ENSMUSG00000060780	Lrrtm1	4632401D06Rik|AW125451	leucine rich repeat transmembrane neuronal 1	protein-coding	0.010000	0.338308			-19(ATATGCATGTGAATGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1067	chr15	18925515	18925715	+	1.17062	NA	intron (NM_001316758, intron 2 of 11)	intron (NM_001316758, intron 2 of 11)	105286	NM_009865	320873	Mm.117794	NM_009865	ENSMUSG00000022321	Cdh10	A830016G23Rik|C030003B10Rik|C030011H18Rik	cadherin 10	protein-coding	0.005000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-1504	chr18	81380936	81381136	+	1.17062	NA	Intergenic	Intergenic	-394015	NM_001369133	20689	Mm.215917	NM_178280	ENSMUSG00000024565	Sall3	B130022O04Rik|Msal|Msal-1|Sal|Salt|Spalt	spalt like transcription factor 3	protein-coding	0.005000	0.303483			-22(TTATTTTAATGTAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1672	chr2	45496438	45496638	+	1.17062	NA	Intergenic	L1_Rod|LINE|L1	-200067	NR_040497	69405	Mm.396184	NR_040497	ENSMUSG00000086202	1700019E08Rik	-	RIKEN cDNA 1700019E08 gene	ncRNA	0.000000	0.283582			
ePOU_nocontrol_ChIP_peaks_unique-1538	chr19	14275185	14275385	+	1.17062	NA	Intergenic	Intergenic	160665	NR_152176	667433	Mm.128913	NR_152176		Gm8630	EG667433	predicted gene 8630	ncRNA	0.000000	0.368159			7(CATTTGACTTGCATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-379	chr10	100487307	100487507	+	1.17062	NA	promoter-TSS (NM_001110013)	promoter-TSS (NM_001110013)	-60	NM_001033332	237500	Mm.296805	NM_001033332	ENSMUSG00000036676	Tmtc3	9130014E20Rik|B130008E12Rik|mSmile	transmembrane and tetratricopeptide repeat containing 3	protein-coding	0.075000	0.606965			
Oct4_nocontrol_ChIP_peaks_unique-25	chr12	106010213	106010413	+	1.17062	NA	promoter-TSS (NM_011705)	promoter-TSS (NM_011705)	50	NM_001029843	22367	Mm.2981	NM_011705	ENSMUSG00000021115	Vrk1	51PK	vaccinia related kinase 1	protein-coding	0.110000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-2002	chr3	123267172	123267372	+	1.17062	NA	promoter-TSS (NM_027135)	promoter-TSS (NM_027135)	-224	NM_027135	69608	Mm.29293	NM_027135	ENSMUSG00000039234	Sec24d	2310020L09Rik|Gm1349	Sec24 related gene family, member D (S. cerevisiae)	protein-coding	0.080000	0.626866			
ePOU_nocontrol_ChIP_peaks_unique-1845	chr3	8840467	8840667	+	1.17062	NA	intron (NM_025434, intron 2 of 2)	intron (NM_025434, intron 2 of 2)	83290	NM_025434	66230	Mm.38460	NM_025434	ENSMUSG00000040269	Mrps28	1500012D08Rik|AW061224	mitochondrial ribosomal protein S28	protein-coding	0.005000	0.517413			
ePOU_nocontrol_ChIP_peaks_unique-2866	chr9	44407402	44407602	+	1.17062	NA	promoter-TSS (NM_021789)	promoter-TSS (NM_021789)	46	NM_021789	60409	Mm.29814	NM_021789	ENSMUSG00000032112	Trappc4	1500017G03Rik|AI303617|HSPC172|PTD009|Sbd|Sbdn|Sdcbp2|TRS23	trafficking protein particle complex 4	protein-coding	0.030000	0.527363			
ePOU_nocontrol_ChIP_peaks_unique-2093	chr4	59202622	59202822	+	1.17062	NA	intron (NM_011673, intron 1 of 8)	intron (NM_011673, intron 1 of 8)	13172	NM_011673	22234	Mm.198803	NM_011673	ENSMUSG00000028381	Ugcg	AU043821|C80537|Epcs21|GlcT-1|Ugcgl	UDP-glucose ceramide glucosyltransferase	protein-coding	0.010000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-2224	chr5	32191651	32191851	+	1.17062	NA	Intergenic	Intergenic	-40957	NM_030072	665270	Mm.160067	NM_030072	ENSMUSG00000029134	Plb1	4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606	phospholipase B1	protein-coding	0.000000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-1875	chr3	41082764	41082964	+	1.17062	NA	exon (NM_027558, exon 1 of 3)	exon (NM_027558, exon 1 of 3)	182	NM_027558	70804	Mm.40321	NM_027558	ENSMUSG00000049940	Pgrmc2	4631434O19Rik|5730409G06Rik|DG6|PMBP	progesterone receptor membrane component 2	protein-coding	0.125000	0.766169			
ePOU_nocontrol_ChIP_peaks_unique-2558	chr7	24972485	24972685	+	1.17062	NA	5' UTR (NM_010261, exon 1 of 5)	5' UTR (NM_010261, exon 1 of 5)	143	NM_010261	14470	Mm.22473	NM_010261	ENSMUSG00000003380	Rabac1	2310040I06Rik|Gbpap1|PRA1|prenylin	Rab acceptor 1 (prenylated)	protein-coding	0.055000	0.631841			
ePOU_nocontrol_ChIP_peaks_unique-1813	chr2	156111756	156111956	+	1.17062	NA	5' UTR (NM_029397, exon 1 of 3)	5' UTR (NM_029397, exon 1 of 3)	109	NM_170598	75710	Mm.27660	NM_029397	ENSMUSG00000089824	Rbm12	5730420G12Rik|9430070C08Rik|AI852903|SWAN|mKIAA0765	RNA binding motif protein 12	protein-coding	0.120000	0.721393			
Oct4_nocontrol_ChIP_peaks_unique-100	chr9	51008917	51009117	+	1.17062	NA	promoter-TSS (NM_178710)	promoter-TSS (NM_178710)	56	NM_178710	235344	Mm.104932	NM_178710	ENSMUSG00000037112	Sik2	G630080D20Rik|Snf1lk2	salt inducible kinase 2	protein-coding	0.145000	0.805970			
ePOU_nocontrol_ChIP_peaks_unique-2311	chr5	107519861	107520061	+	1.17062	NA	Intergenic	RLTR13D5|LTR|ERVK	-14759	NM_175241	76421	Mm.67037	NM_175241	ENSMUSG00000089798	1700028K03Rik	-	RIKEN cDNA 1700028K03 gene	protein-coding	0.000000	0.383085	-47(CATGAATAATGCAAT,+,0.00),-47(CATGAATAATGCAAT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1185	chr16	10264570	10264770	+	1.17062	NA	Intergenic	RLTR13D5|LTR|ERVK	49298	NM_007929	13731	Mm.246009	NM_007929	ENSMUSG00000022505	Emp2	XMP	epithelial membrane protein 2	protein-coding	0.010000	0.378109	-62(CATGAATAATGCAGT,+,0.00),-62(CATGAATAATGCAGT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2703	chr8	25658325	25658525	+	1.17062	NA	intron (NM_001001735, intron 4 of 9)	B1_Mur1|SINE|Alu	17848	NM_001081269	234135	Mm.217337	NM_001001735	ENSMUSG00000054823	Nsd3	6720429E03|A530023P05|AI528490|WHISTLE|Whsc1l1	nuclear receptor binding SET domain protein 3	protein-coding	0.000000	0.412935			-42(CCTTTGTTATGTTAAA,+,0.00)
merged_common-190	chr5	39027152	39027352	+	1.17062	NA	Intergenic	Intergenic	-150559	NM_013748	27278	Mm.440845	NM_013748	ENSMUSG00000039315	Clnk	MIST	cytokine-dependent hematopoietic cell linker	protein-coding	0.000000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-914	chr13	116979515	116979715	+	1.17062	NA	intron (NM_001081009, intron 3 of 26)	intron (NM_001081009, intron 3 of 26)	45916	NM_001081009	52552	Mm.274466	NM_027272	ENSMUSG00000021725	Parp8	2810430O08Rik|ARTD16|D13Ertd275e	poly (ADP-ribose) polymerase family, member 8	protein-coding	0.015000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-1817	chr2	160799747	160799947	+	1.17062	NA	intron (NM_177263, intron 2 of 3)	intron (NM_177263, intron 2 of 3)	68537	NM_021280	18803	Mm.44463	NM_021280	ENSMUSG00000016933	Plcg1	AI894140|Cded|Plc-1|Plc-gamma1|Plcg-1	phospholipase C, gamma 1	protein-coding	0.000000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-551	chr11	86473257	86473457	+	1.17062	NA	Intergenic	Intergenic	-11300	NM_029788	76892	Mm.262707	NM_029788	ENSMUSG00000020521	Rnft1	0610013E23Rik|AV007605	ring finger protein, transmembrane 1	protein-coding	0.020000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-92	chr1	78537422	78537622	+	1.17062	NA	intron (NM_026713, intron 6 of 6)	intron (NM_026713, intron 6 of 6)	26462	NM_026713	68393	Mm.41325	NM_026713	ENSMUSG00000012187	Mogat1	0610030A14Rik|1110064N14Rik|Dgat2l|Dgat2l1|MGAT1|WI1-2612I11.1|mDC2	monoacylglycerol O-acyltransferase 1	protein-coding	0.015000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-2484	chr6	97753895	97754095	+	1.17062	NA	Intergenic	Intergenic	-53063	NM_001113198	17342	Mm.333284	NM_008601	ENSMUSG00000035158	Mitf	BCC2|Bhlhe32|Gsfbcc2|Vitiligo|Wh|bw|mi|vit	melanogenesis associated transcription factor	protein-coding	0.020000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-2517	chr6	124903799	124903999	+	1.17062	NA	TTS (NM_008479)	TTS (NM_008479)	7806	NM_008479	16768	Mm.4528	NM_008479	ENSMUSG00000030124	Lag3	CD223|LAG-3|Ly66	lymphocyte-activation gene 3	protein-coding	0.075000	0.592040			
ePOU_nocontrol_ChIP_peaks_unique-203	chr1	177078637	177078837	+	1.17062	NA	intron (NM_011785, intron 7 of 12)	intron (NM_011785, intron 7 of 12)	170030	NM_011785	23797	Mm.235194	NM_011785	ENSMUSG00000019699	Akt3	AI851531|D930002M15Rik|Nmf350	thymoma viral proto-oncogene 3	protein-coding	0.015000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-923	chr14	14063452	14063652	+	1.17062	NA	intron (NM_139227, intron 4 of 11)	B1F|SINE|Alu	51061	NM_139227	246103	Mm.133625	NM_139227	ENSMUSG00000021738	Atxn7	A430107N12Rik|AI627028|Sca7|ataxin-7	ataxin 7	protein-coding	0.010000	0.472637			
ePOU_nocontrol_ChIP_peaks_unique-1169	chr15	100521470	100521670	+	1.17062	NA	intron (NM_001355497, intron 6 of 15)	intron (NM_001355497, intron 6 of 15)	-26331	NM_153407	207785	Mm.294969	NM_153407	ENSMUSG00000044636	Csrnp2	CSRNP-2|Csnrp2|taip-12	cysteine-serine-rich nuclear protein 2	protein-coding	0.000000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-2498	chr6	108185409	108185609	+	1.17062	NA	promoter-TSS (NM_145937)	promoter-TSS (NM_145937)	74	NM_145937	58911	Mm.439876	NM_145937	ENSMUSG00000030101	Sumf1	AA543204|AI463102|AI851573|FGE	sulfatase modifying factor 1	protein-coding	0.100000	0.656716			
ePOU_nocontrol_ChIP_peaks_unique-2865	chr9	44379485	44379685	+	1.17062	NA	promoter-TSS (NM_021395)	promoter-TSS (NM_021395)	95	NM_021395	12282	Mm.116721	NM_021395	ENSMUSG00000032115	Hyou1	AI415631|CBP-140|Cab140|Grp170|Orp150	hypoxia up-regulated 1	protein-coding	0.125000	0.706468			
ePOU_nocontrol_ChIP_peaks_unique-1999	chr3	121650558	121650758	+	1.17062	NA	Intergenic	Intergenic	-4205	NR_036458	100503044	Mm.65320	NM_176992	ENSMUSG00000044522	A730020M07Rik	-	RIKEN cDNA A730020M07 gene	ncRNA	0.015000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-1073	chr15	23559704	23559904	+	1.17062	NA	Intergenic	Intergenic	523341	NM_001081299	320865	Mm.241965	NM_001081299	ENSMUSG00000040420	Cdh18	B230220E17Rik|Cdh14l|Tg(GFAP-APOE_i4)1Hol	cadherin 18	protein-coding	0.000000	0.203980	-28(AATGCATTATGCATG,+,0.00),-28(AATGCATTATGCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1655	chr2	30794628	30794828	+	1.17062	NA	TTS (NR_028487)	TTS (NR_028487)	7009	NM_198000	73598	Mm.34166	NM_198000	ENSMUSG00000044320	1700001O22Rik	1700113K14Rik|4930549G18Rik	RIKEN cDNA 1700001O22 gene	protein-coding	0.100000	0.671642			
ePOU_nocontrol_ChIP_peaks_unique-2613	chr7	83820736	83820936	+	1.17062	NA	Intergenic	Intergenic	-25997	NM_029335	75556	Mm.17649	NM_029335	ENSMUSG00000011154	Cfap161	1700026D08Rik|AW047638|AW551802	cilia and flagella associated protein 161	protein-coding	0.015000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-1184	chr16	8829954	8830154	+	1.17062	NA	promoter-TSS (NM_001081400)	promoter-TSS (NM_001081400)	-46	NM_001081400	69053	Mm.390868	NM_001081400	ENSMUSG00000022507	1810013L24Rik	1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903	RIKEN cDNA 1810013L24 gene	protein-coding	0.150000	0.741294			
Oct4_nocontrol_ChIP_peaks_unique-93	chr7	127895535	127895735	+	1.17062	NA	promoter-TSS (NM_178600)	promoter-TSS (NM_178600)	-18	NM_178600	27973	Mm.29703	NM_178600	ENSMUSG00000096145	Vkorc1	D7Wsu86e	vitamin K epoxide reductase complex, subunit 1	protein-coding	0.055000	0.611940			
ePOU_nocontrol_ChIP_peaks_unique-2499	chr6	108335438	108335638	+	1.17062	NA	intron (NM_010585, intron 4 of 61)	intron (NM_010585, intron 4 of 61)	122442	NM_010585	16438	Mm.227912	NM_010585	ENSMUSG00000030102	Itpr1	D6Pas2|Gm10429|IP3R 1|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|insP3R1|opt|wblo	inositol 1,4,5-trisphosphate receptor 1	protein-coding	0.000000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-400	chr10	117824280	117824480	+	1.17062	NA	intron (NM_024457, intron 2 of 7)	ID_B1|SINE|B4	21594	NM_024457	215449	Mm.233009	NM_024457	ENSMUSG00000052681	Rap1b	2810443E11Rik	RAS related protein 1b	protein-coding	0.015000	0.492537			
ePOU_nocontrol_ChIP_peaks_unique-2646	chr7	112039812	112040012	+	1.17062	NA	intron (NM_001357952, intron 1 of 28)	ID4_|SINE|ID	16406	NM_177249	74996	Mm.16974	NM_133758	ENSMUSG00000059263	Usp47	4930502N04Rik|A630020C16Rik	ubiquitin specific peptidase 47	protein-coding	0.000000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-1902	chr3	58525698	58525898	+	1.17062	NA	promoter-TSS (NM_030685)	promoter-TSS (NM_030685)	-23	NM_001005509	229317	Mm.21617	NM_001005509	ENSMUSG00000027810	Eif2a	D030048D22|D3Ertd194e	eukaryotic translation initiation factor 2A	protein-coding	0.105000	0.696517			
ePOU_nocontrol_ChIP_peaks_unique-1751	chr2	115056785	115056985	+	1.17062	NA	Intergenic	Intergenic	287395	NR_040516	78193	Mm.189508	NR_040516	ENSMUSG00000087309	4930528P14Rik	-	RIKEN cDNA 4930528P14 gene	ncRNA	0.005000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-2546	chr7	4136713	4136913	+	1.17062	NA	promoter-TSS (NM_172736)	promoter-TSS (NM_172736)	113	NR_033548	100037396	Mm.447887	NR_033548	ENSMUSG00000085886	D030047H15Rik	Gm15924	RIKEN cDNA D030047H15 gene	ncRNA	0.055000	0.527363			
ePOU_nocontrol_ChIP_peaks_unique-1464	chr18	53672101	53672301	+	1.17062	NA	intron (NR_040349, intron 1 of 2)	B3A|SINE|B2	24050	NR_040349	100502945	Mm.376937	NR_040349	ENSMUSG00000118362	Gm19466	-	predicted gene, 19466	ncRNA	0.020000	0.477612			
ePOU_nocontrol_ChIP_peaks_unique-1400	chr17	85090431	85090631	+	1.17062	NA	promoter-TSS (NM_145984)	promoter-TSS (NM_145984)	-95	NM_001364946	73582	Mm.260753	NM_028576	ENSMUSG00000071037	Camkmt	1700106N22Rik|AI480743|AV099781|CLNMT|CaM KMT	calmodulin-lysine N-methyltransferase	protein-coding	0.055000	0.562189			
ePOU_nocontrol_ChIP_peaks_unique-127	chr1	120586776	120586976	+	1.17062	NA	Intergenic	ID_B1|SINE|B4	-15611	NM_010133	13798	Mm.2657	NM_010133	ENSMUSG00000058665	En1	En-1|Mo-en.1|engrailed-1	engrailed 1	protein-coding	0.005000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-2149	chr4	120148950	120149150	+	1.17062	NA	Intergenic	Intergenic	-12156	NM_007902	13615	Mm.284855	NM_007902	ENSMUSG00000028635	Edn2	ET-2|PPET2|VIC	endothelin 2	protein-coding	0.060000	0.621891			
ePOU_nocontrol_ChIP_peaks_unique-2835	chr9	14890816	14891016	+	1.17062	NA	intron (NM_176807, intron 4 of 4)	intron (NM_176807, intron 4 of 4)	13035	NM_022888	64931	Mm.86738	NM_022888	ENSMUSG00000031933	Izumo1r	0910001L11Rik|C86255|Folbp3|Folr4|Juno	IZUMO1 receptor, JUNO	protein-coding	0.000000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-1792	chr2	135792973	135793173	+	1.17062	NA	intron (NM_001355154, intron 1 of 36)	Lx8b|LINE|L1	28235	NM_001355154	18798	Mm.38009	NM_013829	ENSMUSG00000039943	Plcb4	A930039J07Rik|AI854601|C230058B11Rik	phospholipase C, beta 4	protein-coding	0.005000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-1965	chr3	99913548	99913748	+	1.17062	NA	intron (NM_028892, intron 1 of 48)	intron (NM_028892, intron 1 of 48)	28231	NM_028892	74362	Mm.55847	NM_028892	ENSMUSG00000027867	Spag17	4931427F14Rik|PF6|Spag17-ps	sperm associated antigen 17	protein-coding	0.005000	0.318408			-58(TATTTCTCATGTTAAT,+,0.00),83(ATTTACAAAACAAATT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1259	chr16	62909041	62909241	+	1.17062	NA	intron (NM_011173, intron 8 of 14)	intron (NM_011173, intron 8 of 14)	54834	NM_011173	19128	Mm.127156	NM_011173	ENSMUSG00000022912	Pros1	AW214361	protein S (alpha)	protein-coding	0.005000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-2736	chr8	61591214	61591414	+	1.17062	NA	promoter-TSS (NM_001293774)	promoter-TSS (NM_001293774)	-175	NM_001293774	72333	Mm.29933	NM_001081390	ENSMUSG00000058056	Palld	2410003B16Rik|6030492A02	palladin, cytoskeletal associated protein	protein-coding	0.040000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-2203	chr5	22282229	22282429	+	1.17062	NA	intron (NM_011261, intron 2 of 63)	intron (NM_011261, intron 2 of 63)	62376	NM_001310464	19699	Mm.425236	NM_011261	ENSMUSG00000042453	Reln	reeler|rl	reelin	protein-coding	0.005000	0.373134			
Oct4_nocontrol_ChIP_peaks_unique-89	chr7	78759580	78759780	+	1.17062	NA	Intergenic	Intergenic	23409	NM_023331	67308	Mm.193181	NM_023331	ENSMUSG00000030612	Mrpl46	3110052F15Rik|C15orf4|C80107|LIECG2|P2ECSL	mitochondrial ribosomal protein L46	protein-coding	0.010000	0.447761		-5(TGTGCATATGCATG,+,0.00),-5(TGTGCATATGCATG,-,0.00),13(CGTGCATATGCATG,+,0.00),13(CGTGCATATGCATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1683	chr2	53585918	53586118	+	1.17062	NA	Intergenic	L1M2|LINE|L1	393934	NM_022989	65103	Mm.37623	NM_022989	ENSMUSG00000026960	Arl6ip6	2310057C01Rik|2610529A11Rik|Aip-6	ADP-ribosylation factor-like 6 interacting protein 6	protein-coding	0.000000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-1596	chr19	50214861	50215061	+	1.17062	NA	intron (NM_001360457, intron 17 of 26)	intron (NM_001360457, intron 17 of 26)	463685	NM_001360457	58178	Mm.313672	NM_021377	ENSMUSG00000043531	Sorcs1	Sorcs|mSorCS	sortilin-related VPS10 domain containing receptor 1	protein-coding	0.000000	0.343284	30(AATGAATAATGCATT,+,0.00),30(AATGAATAATGCATT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-744	chr12	93305530	93305730	+	1.17062	NA	Intergenic	Intergenic	139193	NR_126436	75295	Mm.243878	NR_126436	ENSMUSG00000113164	4930559C10Rik	-	RIKEN cDNA 4930559C10 gene	ncRNA	0.010000	0.373134			-84(ATATGCATCACAATGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1309	chr17	6861720	6861920	+	1.17062	NA	Intergenic	Intergenic	33517	NR_030465	751529		NR_030465	ENSMUSG00000076218	Mir692-1	Mirn692-1|mir-692-1	microRNA 692-1	ncRNA	0.035000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-1051	chr15	3583268	3583468	+	1.17062	NA	promoter-TSS (NM_010284)	promoter-TSS (NM_010284)	-16	NM_010284	14600	Mm.3986	NM_010284	ENSMUSG00000055737	Ghr	GHBP|GHR/BP	growth hormone receptor	protein-coding	0.080000	0.731343			
ePOU_nocontrol_ChIP_peaks_unique-2310	chr5	107209975	107210175	+	1.17062	NA	intron (NM_011578, intron 3 of 16)	intron (NM_011578, intron 3 of 16)	79554	NM_011578	21814	Mm.200775	NM_011578	ENSMUSG00000029287	Tgfbr3	1110036H20Rik|AU015626|AW215636|TBRIII	transforming growth factor, beta receptor III	protein-coding	0.005000	0.487562			-29(CATTTGCTATGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1045	chr14	121614954	121615154	+	1.17062	NA	intron (NM_001081039, intron 27 of 53)	L1ME1|LINE|L1	83363	NM_001081039	105445	Mm.378591	NM_134074	ENSMUSG00000025558	Dock9	AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058	dedicator of cytokinesis 9	protein-coding	0.000000	0.417910	52(CATTCATTATTCATA,+,0.00),52(CATTCATTATTCATA,-,0.00)	-61(CATGCACATTCATG,+,0.00),-61(CATGCACATTCATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2887	chr9	59353993	59354193	+	1.17062	NA	promoter-TSS (NM_175325)	promoter-TSS (NM_175325)	-585	NM_001359558	102774	Mm.200714	NM_175325	ENSMUSG00000025235	Bbs4	AW537059|AW742241|D9Ertd464e	Bardet-Biedl syndrome 4 (human)	protein-coding	0.000000	0.308458			-15(ATTTACATGGTAAGAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2877	chr9	55208934	55209134	+	1.17062	NA	promoter-TSS (NM_028049)	promoter-TSS (NM_028049)	99	NM_028049	71999	Mm.276429	NM_028049	ENSMUSG00000032309	Fbxo22	0610033L19Rik|1600016C16Rik	F-box protein 22	protein-coding	0.115000	0.696517			
ePOU_nocontrol_ChIP_peaks_unique-2153	chr4	123750385	123750585	+	1.17062	NA	promoter-TSS (NM_023423)	promoter-TSS (NM_023423)	-186	NM_023423	68050	Mm.27903	NM_023423	ENSMUSG00000023075	Akirin1	6330407G11Rik	akirin 1	protein-coding	0.085000	0.746269			
ePOU_nocontrol_ChIP_peaks_unique-1220	chr16	32929966	32930166	+	1.17062	NA	intron (NM_001310672, intron 1 of 19)	B3A|SINE|B2	15966	NM_001310672	70144	Mm.491178	NM_001081255	ENSMUSG00000022801	Lrch3	2210409B11Rik|AW215594|Gm1742	leucine-rich repeats and calponin homology (CH) domain containing 3	protein-coding	0.010000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-1816	chr2	160463405	160463605	+	1.17062	NA	Intergenic	Intergenic	-96440	NM_010658	16658	Mm.330745	NM_010658	ENSMUSG00000074622	Mafb	Kreisler|Krml|Krml1|kr	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)	protein-coding	0.000000	0.248756		-32(CATAAATATGTATA,+,0.00),-32(CATAAATATGTATA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2505	chr6	114913356	114913556	+	1.17062	NA	intron (NM_001356371, intron 2 of 5)	intron (NM_001356371, intron 2 of 5)	8365	NM_177683	232334	Mm.268357	NM_177683	ENSMUSG00000030315	Vgll4	BC048841|VGL-4	vestigial like family member 4	protein-coding	0.010000	0.402985			10(GCTTTTTCATTCATAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-577	chr11	97936575	97936775	+	1.17062	NA	intron (NM_028199, intron 9 of 13)	intron (NM_028199, intron 9 of 13)	49771	NM_001163608	72324	Mm.39617	NM_028199	ENSMUSG00000017417	Plxdc1	2410003I07Rik|AI848450|Tem7	plexin domain containing 1	protein-coding	0.000000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-2047	chr4	7105466	7105666	+	1.17062	NA	Intergenic	Intergenic	-114843	NM_145711	252838	Mm.435828	NM_145711	ENSMUSG00000041272	Tox	1700007F02Rik	thymocyte selection-associated high mobility group box	protein-coding	0.005000	0.338308	-18(AATGATTTATTCAGA,-,0.00)		28(GATTTGGCTTGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-446	chr11	26376515	26376715	+	1.17062	NA	Intergenic	Intergenic	-10469	NR_102382	67030	Mm.18875	NM_025923	ENSMUSG00000004018	Fancl	2010322C19Rik|AW554273|B230118H11Rik|Phf9|Pog|gcd	Fanconi anemia, complementation group L	protein-coding	0.005000	0.318408			
ePOU_nocontrol_ChIP_peaks_unique-2714	chr8	36184156	36184356	+	1.17062	NA	Intergenic	Intergenic	28246	NR_151736	330738	Mm.128075	NR_151736	ENSMUSG00000109704	Gm38414	A230084N10|Gm45568	predicted gene, 38414	ncRNA	0.030000	0.592040			
ePOU_nocontrol_ChIP_peaks_unique-1907	chr3	63929193	63929393	+	1.17062	NA	promoter-TSS (NM_001357824)	promoter-TSS (NM_001357824)	179	NM_177856	329659	Mm.39342	NM_177856	ENSMUSG00000048581	E130311K13Rik	-	RIKEN cDNA E130311K13 gene	protein-coding	0.115000	0.711443			
ePOU_nocontrol_ChIP_peaks_unique-1864	chr3	31281435	31281635	+	1.17062	NA	intron (NM_172861, intron 1 of 7)	L1MB7|LINE|L1	28784	NM_172861	241919	Mm.285366	NM_172861	ENSMUSG00000069072	Slc7a14	A930013N06|BC061928	solute carrier family 7 (cationic amino acid transporter, y+ system), member 14	protein-coding	0.010000	0.303483			
ePOU_nocontrol_ChIP_peaks_unique-2653	chr7	114892750	114892950	+	1.17062	NA	Intergenic	Intergenic	-55800	NR_040317	101786	Mm.395157	NR_040317	ENSMUSG00000108379	A730082K24Rik	AU044236	RIKEN cDNA A730082K24 gene	ncRNA	0.000000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-136	chr1	131334871	131335071	+	1.17062	NA	intron (NM_001081011, intron 11 of 22)	intron (NM_001081011, intron 11 of 22)	-55408	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-E|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding	0.000000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-22	chr1	21836467	21836667	+	1.17062	NA	intron (NM_001160139, intron 1 of 14)	intron (NM_001160139, intron 1 of 14)	125375	NM_023872	226922	Mm.336519	NM_023872	ENSMUSG00000028033	Kcnq5	7730402H11|9230107O05Rik|AA589396|D1Mgi1	potassium voltage-gated channel, subfamily Q, member 5	protein-coding	0.010000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-1824	chr2	164911305	164911505	+	1.17062	NA	intron (NM_199027, intron 1 of 27)	CpG	345	NM_199027	329559	Mm.330776	NM_199027	ENSMUSG00000039834	Zfp335	1810045J01Rik|NIF-1|Nif1|Znf335	zinc finger protein 335	protein-coding	0.115000	0.766169			
ePOU_nocontrol_ChIP_peaks_unique-1448	chr18	36735208	36735408	+	1.17062	NA	intron (NM_028036, intron 1 of 11)	CpG	238	NM_028036	71983	Mm.135188	NM_028036	ENSMUSG00000006850	Tmco6	2410015B03Rik	transmembrane and coiled-coil domains 6	protein-coding	0.080000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-45	chr1	42617034	42617234	+	1.17062	NA	Intergenic	Intergenic	77691	NR_027826	66297	Mm.45203	NM_183252	ENSMUSG00000060424	Pantr1	2610017I09Rik|Pou3f3os|linc-Brn1a	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1	ncRNA	0.000000	0.338308		-12(GATGCAAATTTATG,-,0.00)	-19(CTTTTTAGATGCAAAT,+,0.00),57(TTTTTGCATTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-8	chr1	11748559	11748759	+	1.17062	NA	intron (NM_001160369, intron 8 of 13)	intron (NM_001160369, intron 8 of 13)	334554	NM_001160371	320492	Mm.52021	NM_177173	ENSMUSG00000057715	A830018L16Rik	-	RIKEN cDNA A830018L16 gene	protein-coding	0.000000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-388	chr10	108571719	108571919	+	1.17062	NA	intron (NM_001252342, intron 9 of 10)	intron (NM_001252342, intron 9 of 10)	128341	NM_203660	368203	Mm.452758	NM_203660	ENSMUSG00000112039	Gm5136	C6.1AL|EG368203	predicted gene 5136	protein-coding	0.010000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-2593	chr7	64271998	64272198	+	1.17062	NA	Intergenic	Lx9|LINE|L1	-15572	NM_172742	233315	Mm.214959	NM_172742	ENSMUSG00000030522	Mtmr10	BB128963|C79734	myotubularin related protein 10	protein-coding	0.010000	0.492537			
ePOU_nocontrol_ChIP_peaks_unique-1585	chr19	43524544	43524744	+	1.17062	NA	promoter-TSS (NM_010324)	promoter-TSS (NM_010324)	-39	NM_010324	14718	Mm.19039	NM_010324	ENSMUSG00000025190	Got1	AI789014|Got-1|cAspAT|cCAT	glutamic-oxaloacetic transaminase 1, soluble	protein-coding	0.085000	0.597015			
Oct4_nocontrol_ChIP_peaks_unique-77	chr5	122421998	122422198	+	1.17062	NA	promoter-TSS (NM_019805)	promoter-TSS (NM_019805)	-346	NM_019805	56317	Mm.37341	NM_019805	ENSMUSG00000029466	Anapc7	APC7|AW545589	anaphase promoting complex subunit 7	protein-coding	0.055000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-840	chr13	56102675	56102875	+	1.17062	NA	intron (NM_012015, intron 4 of 8)	intron (NM_012015, intron 4 of 8)	32775	NM_001159513	26914	Mm.283802	NM_012015	ENSMUSG00000015937	H2afy	H2AF12M|mH2a1|macroH2A1	H2A histone family, member Y	protein-coding	0.010000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-2266	chr5	69300470	69300670	+	1.17062	NA	intron (NM_175519, intron 1 of 1)	intron (NM_175519, intron 1 of 1)	41139	NM_175519	243043	Mm.234821	NM_175519	ENSMUSG00000037653	Kctd8	A730087N02Rik	potassium channel tetramerisation domain containing 8	protein-coding	0.000000	0.283582			43(CTTTTGTTTTGTAGAA,+,0.00),64(CATTTGATATTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2238	chr5	44546048	44546248	+	1.17062	NA	intron (NM_001077398, intron 2 of 8)	intron (NM_001077398, intron 2 of 8)	253598	NM_001077398	16826	Mm.25785	NM_010698	ENSMUSG00000039706	Ldb2	AI035351|AW146358|CLIM1|CLP-36|Ldb3	LIM domain binding 2	protein-coding	0.015000	0.303483			
ePOU_nocontrol_ChIP_peaks_unique-254	chr10	12572688	12572888	+	1.17062	NA	intron (NM_011682, intron 50 of 73)	intron (NM_011682, intron 50 of 73)	288947	NM_011682	22288	Mm.331784	NM_011682	ENSMUSG00000019820	Utrn	AA589569|DRP|Dmdl	utrophin	protein-coding	0.010000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-274	chr10	24558427	24558627	+	1.17062	NA	intron (NR_163910, intron 3 of 4)	RLTR17|LTR|ERVK	-36915	NM_010217	14219	Mm.390287	NM_010217	ENSMUSG00000019997	Ccn2	Ctgf|Fisp12|Hcs24|fisp-12	cellular communication network factor 2	protein-coding	0.005000	0.422886			30(ATTAACATAAAAATTA,-,0.00),42(ATTAACATAAGAATTA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2765	chr8	78820855	78821055	+	1.17062	NA	intron (NM_001191004, intron 1 of 4)	CpG	197	NM_030145	78651	Mm.28694	NM_030145	ENSMUSG00000031683	Lsm6	1500031N17Rik|2410088K19Rik|AI747288	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated	protein-coding	0.145000	0.771144			
ePOU_nocontrol_ChIP_peaks_unique-1682	chr2	52661816	52662016	+	1.17062	NA	intron (NM_001037099, intron 2 of 13)	intron (NM_001037099, intron 2 of 13)	13943	NM_001285428	12298	Mm.330223	NM_146123	ENSMUSG00000017412	Cacnb4	3110038O15Rik|Cchb4|lh	calcium channel, voltage-dependent, beta 4 subunit	protein-coding	0.005000	0.268657			
ePOU_nocontrol_ChIP_peaks_unique-2971	chr9	124476206	124476406	+	1.17062	NA	non-coding (NR_028110, exon 1 of 1)	non-coding (NR_028110, exon 1 of 1)	556	NR_102716	19054	Mm.271249	NM_011154	ENSMUSG00000093803	Ppp2r3d	PP2A B''-PR59|PP2A PR59|PR59|Ppp2r3|Ppp2r3a	protein phosphatase 2 (formerly 2A), regulatory subunit B'', delta	protein-coding	0.010000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-497	chr11	60954100	60954300	+	1.17062	NA	Intergenic	Intergenic	22146	NR_157293	26397	Mm.18494	NM_008928	ENSMUSG00000018932	Map2k3	AW212142|MAPKK 3|MEK3|MKK3|MKK3b|Prkmk3	mitogen-activated protein kinase kinase 3	protein-coding	0.025000	0.467662			77(TTATAGTGCTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1382	chr17	74395688	74395888	+	1.17062	NA	intron (NM_144798, intron 1 of 13)	CpG	180	NM_144798	210148	Mm.243943	NM_144798	ENSMUSG00000024069	Slc30a6	9530029F08Rik|ZnT6	solute carrier family 30 (zinc transporter), member 6	protein-coding	0.065000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-2039	chr3	155193243	155193443	+	1.17062	NA	intron (NM_028938, intron 7 of 7)	intron (NM_028938, intron 7 of 7)	99909	NM_028938	74435	Mm.195711	NM_028938	ENSMUSG00000028182	Lrriq3	4930438B07Rik|4930511J15Rik|4933403H06Rik|BB020367|Lrrc44	leucine-rich repeats and IQ motif containing 3	protein-coding	0.000000	0.343284			44(TTTTTGCAATGAAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1138	chr15	77743984	77744184	+	1.17062	NA	Intergenic	RLTR22_Mus|LTR|ERVK	11189	NM_001081970	239552	Mm.125650	NM_001081970	ENSMUSG00000056656	Apol8	9830006J20Rik|APOL-II|Apol2	apolipoprotein L 8	protein-coding	0.010000	0.373134			-9(GTTTGAATGAAAATGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2688	chr8	6111357	6111557	+	1.17062	NA	Intergenic	Intergenic	-1006170	NM_011388	20494	Mm.3500	NM_011388	ENSMUSG00000023073	Slc10a2	9130221J18Rik|AI605518|ASBT|IBAT|ISBT	solute carrier family 10, member 2	protein-coding	0.005000	0.278607			-84(TAACTGTTATGTAAAG,+,0.00),-23(ATATTTTCTTACAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-3000	chrX	161198303	161198503	+	1.17062	NA	intron (NM_001290651, intron 6 of 25)	intron (NM_001290651, intron 6 of 25)	35653	NM_001290652	107815	Mm.159173	NM_133194	ENSMUSG00000000037	Scml2	4932420G07Rik	Scm polycomb group protein like 2	protein-coding	0.000000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-946	chr14	31128998	31129198	+	1.17062	NA	promoter-TSS (NM_001308464)	promoter-TSS (NM_001308464)	-168	NM_001308464	66487	Mm.379116	NM_001308091	ENSMUSG00000058351	Smim4	2010107H07Rik|Gm41122	small integral membrane protein 4	protein-coding	0.085000	0.641791			
merged_common-32	chr10	122138102	122138302	+	1.17062	NA	Intergenic	Intergenic	18505	NR_027637	100043513	Mm.429141	NR_027637	ENSMUSG00000111952	Gm4489	Gm241	predicted gene 4489	ncRNA	0.005000	0.363184	39(AATGACTAATGTATA,+,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1151	chr15	89204999	89205199	+	1.17062	NA	Intergenic	L1M4c|LINE|L1	-6460	NM_027805	71474	Mm.184055	NM_026813	ENSMUSG00000036561	Ppp6r2	1110033O10Rik|8430411H09Rik|B230107H12Rik|Pp6r2|Saps2	protein phosphatase 6, regulatory subunit 2	protein-coding	0.010000	0.353234			
merged_common-56	chr12	16477770	16477970	+	1.17062	NA	Intergenic	Intergenic	111900	NM_001130412	14245	Mm.153625	NM_015763	ENSMUSG00000020593	Lpin1	Lipin1|fld	lipin 1	protein-coding	0.010000	0.437811			63(ATATTGTAATGCTGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1625	chr2	12153215	12153415	+	1.17062	NA	intron (NM_001001309, intron 25 of 29)	intron (NM_001001309, intron 25 of 29)	-147931	NR_040353	338535	Mm.483275	NR_040353	ENSMUSG00000086843	E030013I19Rik	-	RIKEN cDNA E030013I19 gene	ncRNA	0.000000	0.303483			
ePOU_nocontrol_ChIP_peaks_unique-3001	chrX	166595023	166595223	+	1.17062	NA	Intergenic	Intergenic	-9407	NM_019397	54156	Mm.37707	NM_019397	ENSMUSG00000000402	Egfl6	Maeg	EGF-like-domain, multiple 6	protein-coding	0.005000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-2804	chr8	114973071	114973271	+	1.17062	NA	intron (NM_019573, intron 8 of 8)	intron (NM_019573, intron 8 of 8)	533519	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding	0.025000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-828	chr13	46218585	46218785	+	1.17062	NA	Intergenic	Intergenic	-55036	NM_001005422	380842	Mm.188108	NM_001005422	ENSMUSG00000063529	Stmnd1	Gm1574	stathmin domain containing 1	protein-coding	0.035000	0.422886			-19(TTTTTTTTTTTTAAAT,+,0.00),13(ATCTGCATTACAAATT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1883	chr3	50327469	50327669	+	1.17062	NA	Intergenic	Intergenic	116044	NM_011990	26570	Mm.260988	NM_011990	ENSMUSG00000027737	Slc7a11	9930009M05Rik|AI451155|sut|xCT	solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	protein-coding	0.010000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-726	chr12	79863732	79863932	+	1.17062	NA	Intergenic	B3|SINE|B2	60901	NR_131075	77290	Mm.395042	NR_131073	ENSMUSG00000112765	9430078K24Rik	-	RIKEN cDNA 9430078K24 gene	ncRNA	0.005000	0.373134		-27(GGTACATATGCATA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2468	chr6	83536480	83536680	+	1.17062	NA	promoter-TSS (NM_009610)	promoter-TSS (NM_009610)	-329	NM_009610	11468	Mm.292865	NM_009610	ENSMUSG00000059430	Actg2	ACTA3|Act-4|Act4|SMGA	actin, gamma 2, smooth muscle, enteric	protein-coding	0.010000	0.572139			
ePOU_nocontrol_ChIP_peaks_unique-887	chr13	98016315	98016515	+	1.17062	NA	intron (NM_012026, intron 9 of 35)	intron (NM_012026, intron 9 of 35)	189750	NM_012026	110596	Mm.252718	NM_012026	ENSMUSG00000021662	Arhgef28	9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF	Rho guanine nucleotide exchange factor (GEF) 28	protein-coding	0.035000	0.572139			
ePOU_nocontrol_ChIP_peaks_unique-1924	chr3	69879704	69879904	+	1.17062	NA	Intergenic	Intergenic	-19910	NM_001164210	66183	Mm.45481	NM_133675	ENSMUSG00000043461	Sptssb	1110032A04Rik|ADMP|Sssptb	serine palmitoyltransferase, small subunit B	protein-coding	0.010000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-197	chr1	174728985	174729185	+	1.17062	NA	intron (NM_019445, intron 14 of 17)	intron (NM_019445, intron 14 of 17)	192734	NM_011825	23893	Mm.25760	NM_011825	ENSMUSG00000050069	Grem2	Gremlin2|Prdc	gremlin 2, DAN family BMP antagonist	protein-coding	0.000000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-2618	chr7	89456558	89456758	+	1.17062	NA	Intergenic	Intergenic	30352	NR_102276	101521	Mm.26902	NR_102276	ENSMUSG00000109311	AI314278	-	expressed sequence AI314278	ncRNA	0.010000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-1697	chr2	65490243	65490443	+	1.17062	NA	intron (NM_001355168, intron 17 of 26)	intron (NM_001355168, intron 17 of 26)	77149	NM_001355171	20269	Mm.330256	NM_018732	ENSMUSG00000057182	Scn3a	Gm1000|Nav1.3	sodium channel, voltage-gated, type III, alpha	protein-coding	0.005000	0.358209			
ePOU_nocontrol_ChIP_peaks_unique-1512	chr19	3912795	3912995	+	1.17062	NA	promoter-TSS (NM_144870)	promoter-TSS (NM_144870)	-121	NM_001271444	225887	Mm.44227	NM_144870	ENSMUSG00000059734	Ndufs8	BC021616|CI-23kD|TYKY	NADH:ubiquinone oxidoreductase core subunit S8	protein-coding	0.025000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-2530	chr6	137582568	137582768	+	1.17062	NA	intron (NM_001271588, intron 1 of 20)	intron (NM_001271588, intron 1 of 20)	-11659	NM_001271595	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding	0.020000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-766	chr12	108489791	108489991	+	1.17062	NA	intron (NM_001364196, intron 4 of 22)	intron (NM_001364196, intron 4 of 22)	-5405	NM_001364198	68519	Mm.236645	NM_001043335	ENSMUSG00000058070	Eml1	1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAP-1|EMAPL|heco	echinoderm microtubule associated protein like 1	protein-coding	0.010000	0.497512			-24(CTAATCTTATGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1106	chr15	51696581	51696781	+	1.17062	NA	Intergenic	Intergenic	168780	NM_080635	68135	Mm.289800	NM_080635	ENSMUSG00000022312	Eif3h	1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3	eukaryotic translation initiation factor 3, subunit H	protein-coding	0.015000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-1707	chr2	73214218	73214418	+	1.17062	NA	5' UTR (NM_030091, exon 1 of 8)	5' UTR (NM_030091, exon 1 of 8)	129	NM_030091	67059	Mm.22661	NM_025942	ENSMUSG00000027108	Ola1	2510025G09Rik|2810405J23Rik|2810409H07Rik|Gtpbp9|PTD004	Obg-like ATPase 1	protein-coding	0.125000	0.731343			
ePOU_nocontrol_ChIP_peaks_unique-475	chr11	45945003	45945203	+	1.17062	NA	promoter-TSS (NM_028185)	promoter-TSS (NM_028185)	-168	NM_028185	72290	Mm.249827	NM_028185	ENSMUSG00000044847	Lsm11	2210404M20Rik|AV079530	U7 snRNP-specific Sm-like protein LSM11	protein-coding	0.055000	0.601990			
Oct4_nocontrol_ChIP_peaks_unique-69	chr4	129324740	129324940	+	1.17062	NA	intron (NM_009030, intron 3 of 11)	intron (NM_009030, intron 3 of 11)	10530	NM_009030	19646	Mm.12145	NM_009030	ENSMUSG00000057236	Rbbp4	RBAP48|mRbAp48	retinoblastoma binding protein 4, chromatin remodeling factor	protein-coding	0.000000	0.328358			-27(TTTTTTTTTTTCAAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1772	chr2	130219514	130219714	+	1.17062	NA	intron (NM_138655, intron 5 of 19)	intron (NM_138655, intron 5 of 19)	24420	NM_138655	192140	Mm.219546	NM_138655	ENSMUSG00000060332	Tmc2	CWEA2	transmembrane channel-like gene family 2	protein-coding	0.010000	0.278607			38(TTGTGCAAGACAATGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1258	chr16	62627086	62627286	+	1.17062	NA	Intergenic	Intergenic	159530	NM_178925	106338	Mm.26321	NM_178925	ENSMUSG00000050312	Nsun3	6720484A09Rik|AU022521	NOL1/NOP2/Sun domain family member 3	protein-coding	0.015000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-1058	chr15	7022707	7022907	+	1.17062	NA	Intergenic	L2a|LINE|L2	-106765	NM_001358593	16880	Mm.149720	NM_013584	ENSMUSG00000054263	Lifr	A230075M04Rik|AW061234|LIF	LIF receptor alpha	protein-coding	0.000000	0.442786			-87(GAATAGTTATGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-853	chr13	75311606	75311806	+	1.17062	NA	Intergenic	Intergenic	221849	NM_013628	18548	Mm.1333	NM_013628	ENSMUSG00000021587	Pcsk1	Nec-1|Nec1|PC1|PC3|Phpp-1|SPC3	proprotein convertase subtilisin/kexin type 1	protein-coding	0.000000	0.223881	45(CATGAATTATTCATA,+,0.00),45(CATGAATTATTCATA,-,0.00)		-7(ATATCAATAAGAATAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2549	chr7	12977904	12978104	+	1.17062	NA	exon (NM_175558, exon 1 of 6)	exon (NM_175558, exon 1 of 6)	156	NM_175558	269870	Mm.62083	NM_175558	ENSMUSG00000033961	Zfp446	A630035I11Rik|A930031C22|AA120513|AV306632	zinc finger protein 446	protein-coding	0.090000	0.636816			
ePOU_nocontrol_ChIP_peaks_unique-1599	chr19	51811729	51811929	+	1.17062	NA	Intergenic	L1VL4|LINE|L1	-452468	NM_008386	16333	Mm.46269	NM_008386	ENSMUSG00000035804	Ins1	Ins-1|Ins2-rs1	insulin I	protein-coding	0.000000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-2917	chr9	84124146	84124346	+	1.17062	NA	TTS (NM_001305935)	TTS (NM_001305935)	175465	NM_199195	12040	Mm.12819	NM_199195	ENSMUSG00000032263	Bckdhb	BCKDE1B|BCKDH E1-beta	branched chain ketoacid dehydrogenase E1, beta polypeptide	protein-coding	0.020000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-2951	chr9	114632465	114632665	+	1.17062	NA	intron (NM_153585, intron 2 of 19)	intron (NM_153585, intron 2 of 19)	7635	NM_153585	78893	Mm.283708	NM_153585	ENSMUSG00000056167	Cnot10	2600001P13Rik	CCR4-NOT transcription complex, subunit 10	protein-coding	0.005000	0.353234			28(ATTTACATAAAATTAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1446	chr18	36379838	36380038	+	1.17062	NA	intron (NM_001368637, intron 2 of 2)	intron (NM_001368637, intron 2 of 2)	31165	NM_001368637	66060	Mm.272527	NM_001081365	ENSMUSG00000046727	Cystm1	0610010O12Rik	cysteine-rich transmembrane module containing 1	protein-coding	0.020000	0.522388		45(TATGCATATTCCTT,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1985	chr3	110672092	110672292	+	1.17062	NA	Intergenic	(CATATA)n|Simple_repeat|Simple_repeat	-421193	NR_024139	99890	Mm.36115	NM_178891	ENSMUSG00000049300	Prmt6	AW124876|BB233495|Hrmt1l6	protein arginine N-methyltransferase 6	protein-coding	0.000000	0.303483	16(CATGCATGATGCAGT,+,0.00)	-10(TGTAAATATGCATA,+,0.00),-10(TGTAAATATGCATA,-,0.00),-4(TATGCATATGTATA,+,0.00),-4(TATGCATATGTATA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1244	chr16	43613586	43613786	+	1.17062	NA	intron (NM_181058, intron 6 of 6)	intron (NM_181058, intron 6 of 6)	-26969	NR_030576	100124467		NR_030576	ENSMUSG00000076372	Mir568	Mirn568|mmu-mir-568	microRNA 568	ncRNA	0.000000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-188	chr1	170492444	170492644	+	1.17062	NA	intron (NR_154593, intron 2 of 9)	Tigger18a|DNA|TcMar-Tigger	64566	NR_154593	70729	Mm.409310	NM_027528	ENSMUSG00000038473	Nos1ap	6330408P19Rik|Capon	nitric oxide synthase 1 (neuronal) adaptor protein	protein-coding	0.005000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-1319	chr17	21707850	21708050	+	1.17062	NA	intron (NM_001008501, intron 1 of 5)	intron (NM_001008501, intron 1 of 5)	209	NM_001008501	240034	Mm.34723	NM_001008501	ENSMUSG00000067928	Zfp760	9430018I06|BC029103	zinc finger protein 760	protein-coding	0.015000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-64	chr1	58699475	58699675	+	1.17062	NA	Intergenic	Intergenic	-3586	NM_175370	108812	Mm.442063	NM_175370	ENSMUSG00000047528	Flacc1	4933405P16Rik|4933425F06Rik|Als2cr12	flagellum associated containing coiled-coil domains 1	protein-coding	0.000000	0.348259			28(ATTTTAAAAAGAAAGA,-,0.00),61(ATCTGCTTGACAAAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-449	chr11	30224851	30225051	+	1.17062	NA	Intergenic	Intergenic	-5179	NM_175836	20742	Mm.123110	NM_009260	ENSMUSG00000020315	Sptbn1	9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049	spectrin beta, non-erythrocytic 1	protein-coding	0.005000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-2752	chr8	70865693	70865893	+	1.17062	NA	Intergenic	CpG	-2535	NM_001363407	84036	Mm.32074	NM_032397	ENSMUSG00000002908	Kcnn1	AI854248|KCa2.1|SK1	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1	protein-coding	0.075000	0.636816			
ePOU_nocontrol_ChIP_peaks_unique-2578	chr7	43579687	43579887	+	1.17062	NA	5' UTR (NM_001357769, exon 1 of 4)	5' UTR (NM_001357769, exon 1 of 4)	201	NM_172482	210105	Mm.234422	NM_172482	ENSMUSG00000030469	Zfp719	8030458J18|9430094P17Rik|C630016O21Rik|mszf6	zinc finger protein 719	protein-coding	0.050000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-1417	chr18	5749185	5749385	+	1.17062	NA	intron (NM_011546, intron 3 of 7)	intron (NM_011546, intron 3 of 7)	156638	NM_001360982	21417	Mm.3929	NM_011546	ENSMUSG00000024238	Zeb1	3110032K11Rik|AREB6|BZP|MEB1|Nil2|TCF-8|Tcf18|Tcf8|Tw|ZEB|Zfhep|Zfhx1a|Zfx1a|Zfx1ha|[delta]EF1	zinc finger E-box binding homeobox 1	protein-coding	0.000000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-1526	chr19	7206083	7206283	+	1.17062	NA	intron (NM_134150, intron 1 of 6)	CpG	101	NM_134150	107260	Mm.203921	NM_134150	ENSMUSG00000024767	Otub1	AI850305	OTU domain, ubiquitin aldehyde binding 1	protein-coding	0.100000	0.671642			
ePOU_nocontrol_ChIP_peaks_unique-512	chr11	67897127	67897327	+	1.17062	NA	exon (NM_001291049, exon 5 of 15)	exon (NM_001291049, exon 5 of 15)	24926	NM_173754	216835	Mm.158885	NM_173754	ENSMUSG00000020905	Usp43	-	ubiquitin specific peptidase 43	protein-coding	0.025000	0.601990			
ePOU_nocontrol_ChIP_peaks_unique-1039	chr14	116993504	116993704	+	1.17062	NA	intron (NM_001079844, intron 1 of 9)	intron (NM_001079844, intron 1 of 9)	68307	NM_011821	23888	Mm.440025	NM_011821	ENSMUSG00000058571	Gpc6	-	glypican 6	protein-coding	0.005000	0.398010			68(ATTAGCAAGTCAATAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2906	chr9	72111522	72111722	+	1.17062	NA	promoter-TSS (NM_001253862)	promoter-TSS (NM_001253862)	197	NM_011544	21406	Mm.171615	NM_011544	ENSMUSG00000032228	Tcf12	A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20	transcription factor 12	protein-coding	0.150000	0.726368			
ePOU_nocontrol_ChIP_peaks_unique-2715	chr8	40553711	40553911	+	1.17062	NA	intron (NM_001040699, intron 13 of 13)	intron (NM_001040699, intron 13 of 13)	-37964	NM_001271542	18983	Mm.272551	NM_011135	ENSMUSG00000031601	Cnot7	AU022737|CAF-1|Caf1|Pop2	CCR4-NOT transcription complex, subunit 7	protein-coding	0.005000	0.343284			82(ATTTACATATCAATGC,-,0.00)
Oct4_nocontrol_ChIP_peaks_unique-46	chr17	53561781	53561981	+	1.17062	NA	Intergenic	RLTR11B|LTR|ERVK	-5090	NM_020005	18519	Mm.255025	NM_020005	ENSMUSG00000000708	Kat2b	A930006P13Rik|AI461839|AW536563|Pcaf|p/CAF	K(lysine) acetyltransferase 2B	protein-coding	0.005000	0.388060			-67(GTTTGCAGGACAAAAG,-,0.00),0(TTTAGCATTACAATGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2210	chr5	24604944	24605144	+	1.17062	NA	Intergenic	Intergenic	-3042	NM_025891	66993	Mm.436539	NM_025891	ENSMUSG00000028949	Smarcd3	1500001J14Rik|2210409C08Rik|BAF60C	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3	protein-coding	0.055000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-705	chr12	73664410	73664610	+	1.17062	NA	intron (NM_008856, intron 2 of 13)	intron (NM_008856, intron 2 of 13)	79714	NM_001313977	18755	Mm.341677	NM_008856	ENSMUSG00000021108	Prkch	Pkch	protein kinase C, eta	protein-coding	0.010000	0.388060	-82(CTTGCATAATTGATT,+,0.00)		
merged_common-149	chr2	132262995	132263195	+	1.17062	NA	promoter-TSS (NM_138651)	promoter-TSS (NM_138651)	-53	NM_001291040	110911	Mm.284503	NM_138651	ENSMUSG00000058793	Cds2	5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e	CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	protein-coding	0.095000	0.671642			
ePOU_nocontrol_ChIP_peaks_unique-2085	chr4	52985131	52985331	+	1.17062	NA	Intergenic	RLTR51A_Mm|LTR|ERVK?	-4053	NM_028529	73398	Mm.252738	NM_028529	ENSMUSG00000015242	Nipsnap3a	1700054F22Rik|AI429120	nipsnap homolog 3A	protein-coding	0.000000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-1336	chr17	28207592	28207792	+	1.17062	NA	promoter-TSS (NM_027185)	promoter-TSS (NM_027185)	-86	NM_027185	23853	Mm.204731	NM_027185	ENSMUSG00000002257	Def6	2410003F05Rik|6430538D02Rik|AV094905|Ibp|Slat|Slat2|Slat6	differentially expressed in FDCP 6	protein-coding	0.030000	0.621891			
ePOU_nocontrol_ChIP_peaks_unique-1387	chr17	78107283	78107483	+	1.17062	NA	Intergenic	Intergenic	-92865	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding	0.010000	0.353234			73(GTTTTATCATTTTAAT,+,0.00)
merged_common-48	chr11	101119895	101120095	+	1.17062	NA	promoter-TSS (NM_028933)	promoter-TSS (NM_028933)	-122	NM_134024	103733	Mm.479145	NM_134024	ENSMUSG00000035198	Tubg1	1500010O08Rik|AI451582|AI503389|GCP-1|Tubg	tubulin, gamma 1	protein-coding	0.135000	0.616915			
ePOU_nocontrol_ChIP_peaks_unique-2553	chr7	19112468	19112668	+	1.17062	NA	intron (NM_001370812, intron 2 of 13)	intron (NM_001370812, intron 2 of 13)	5776	NM_001370812	243866	Mm.446370	NM_001370811	ENSMUSG00000085601	Gm4969	9330180I18|EG243866	predicted gene 4969	protein-coding	0.005000	0.457711	51(AATGCATAATTCATG,+,0.00),51(AATGCATAATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2975	chrX	20381243	20381443	+	1.17062	NA	intron (NR_110967, intron 2 of 8)	intron (NR_110967, intron 2 of 8)	16862	NR_110967	19889	Mm.288141	NM_133669	ENSMUSG00000060090	Rp2	AI662636|Rp2h	retinitis pigmentosa 2 homolog	protein-coding	0.005000	0.323383			33(CTATTGCTATACAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-184	chr1	168067141	168067341	+	1.17062	NA	Intergenic	Intergenic	364928	NM_183355	18514	Mm.43358	NM_008783	ENSMUSG00000052534	Pbx1	2310056B04Rik|D230003C07Rik|Pbx-1	pre B cell leukemia homeobox 1	protein-coding	0.005000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-110	chr1	93184152	93184352	+	1.17062	NA	intron (NM_001310428, intron 4 of 31)	intron (NM_001310428, intron 4 of 31)	15829	NM_001310428	381284	Mm.193346	NM_001310428	ENSMUSG00000084989	Crocc2	E030010N08Rik|Gm976	ciliary rootlet coiled-coil, rootletin family member 2	protein-coding	0.015000	0.572139			
ePOU_nocontrol_ChIP_peaks_unique-811	chr13	29769825	29770025	+	1.17062	NA	intron (NR_131896, intron 5 of 16)	intron (NR_131896, intron 5 of 16)	85748	NR_131896	68916	Mm.212227	NM_144536	ENSMUSG00000006191	Cdkal1	1190005B03Rik|6620401C13Rik	CDK5 regulatory subunit associated protein 1-like 1	protein-coding	0.020000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-1887	chr3	52267956	52268156	+	1.17062	NA	promoter-TSS (NM_019739)	promoter-TSS (NM_019739)	-281	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding	0.100000	0.621891			
Oct4_nocontrol_ChIP_peaks_unique-34	chr15	9845707	9845907	+	1.17062	NA	Intergenic	RLTR17B_Mm|LTR|ERVK	-96939	NM_177123	320277	Mm.127822	NM_177123	ENSMUSG00000072663	Spef2	C230086A09Rik	sperm flagellar 2	protein-coding	0.000000	0.208955		60(CATGTATATACATA,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-890	chr13	99794092	99794292	+	1.17062	NA	Intergenic	Intergenic	106491	NM_013732	27220	Mm.75498	NM_013732	ENSMUSG00000021647	Cartpt	Cart	CART prepropeptide	protein-coding	0.005000	0.502488			26(TCTTTCTAATTCAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-378	chr10	100474831	100475031	+	1.17062	NA	intron (NM_001033332, intron 3 of 12)	intron (NM_001033332, intron 3 of 12)	12416	NM_001110013	237500	Mm.296805	NM_001033332	ENSMUSG00000036676	Tmtc3	9130014E20Rik|B130008E12Rik|mSmile	transmembrane and tetratricopeptide repeat containing 3	protein-coding	0.005000	0.223881			
ePOU_nocontrol_ChIP_peaks_unique-2278	chr5	79716186	79716386	+	1.17062	NA	Intergenic	Intergenic	-1304285	NM_001347368	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Adgrl3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|Lphn3|mKIAA0768	adhesion G protein-coupled receptor L3	protein-coding	0.000000	0.273632		23(CATGCATATGTATA,+,0.00),23(CATGCATATGTATA,-,0.00)	16(GAGTTATCATGCATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-283	chr10	29454528	29454728	+	1.17062	NA	intron (NM_028351, intron 4 of 4)	intron (NM_028351, intron 4 of 4)	81239	NM_028351	72780	Mm.45191	NM_028351	ENSMUSG00000019880	Rspo3	2810459H04Rik|AW742308|Cristin1|Thsd2	R-spondin 3	protein-coding	0.005000	0.283582			-38(CTATTGATATGTAAAT,+,0.00),85(ATTTGCACAACAAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1084	chr15	35861755	35861955	+	1.17062	NA	intron (NM_177151, intron 43 of 61)	intron (NM_177151, intron 43 of 61)	76391	NM_053071	12864	Mm.548	NM_053071	ENSMUSG00000014313	Cox6c	-	cytochrome c oxidase subunit 6C	protein-coding	0.000000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-2442	chr6	56923903	56924103	+	1.17062	NA	promoter-TSS (NM_026004)	promoter-TSS (NM_026004)	-71	NM_026004	107569	Mm.158936	NM_026004	ENSMUSG00000029780	Nt5c3	1600024P05Rik|2610206B05Rik|3110004A18Rik|AI842776|Nt5c3a|Nt5y|P5'N-1|P5N-1|PN-1|PN-I|PSN1|UMPH|Umph-1|Umph1|cN-III|lupin|p36	5'-nucleotidase, cytosolic III	protein-coding	0.085000	0.621891			
ePOU_nocontrol_ChIP_peaks_unique-684	chr12	50709156	50709356	+	1.17062	NA	Intergenic	Intergenic	-60033	NM_008858	18760	Mm.133719	NM_008858	ENSMUSG00000002688	Prkd1	PKD|PKD1|Pkcm|Prkcm	protein kinase D1	protein-coding	0.005000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-2669	chr7	129495652	129495852	+	1.17062	NA	Intergenic	RLTR13B1|LTR|ERVK	-96111	NM_172255	207425	Mm.229323	NM_172255	ENSMUSG00000042055	Wdr11	2900055P10Rik|AW489876|Brwd2|mKIAA1351	WD repeat domain 11	protein-coding	0.000000	0.412935	-85(ATTGCATTATTCATG,+,0.00),-85(ATTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1203	chr16	21850186	21850386	+	1.17062	NA	Intergenic	ID_B1|SINE|B4	-41683	NM_172821	71751	Mm.420837	NM_172821	ENSMUSG00000033618	Map3k13	C130026N12Rik|LZK	mitogen-activated protein kinase kinase kinase 13	protein-coding	0.000000	0.502488			29(ATAAACATCACAATGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2679	chr7	141008732	141008932	+	1.17062	NA	TTS (NM_025378)	TTS (NM_025378)	1912	NM_025378	66141	Mm.141021	NM_025378	ENSMUSG00000025492	Ifitm3	1110004C05Rik|Cd225|Cdw217|DSPA2b|Fgls|IP15|mil-1	interferon induced transmembrane protein 3	protein-coding	0.010000	0.492537			
ePOU_nocontrol_ChIP_peaks_unique-1033	chr14	105859318	105859518	+	1.17062	NA	Intergenic	RMER10A|LTR|ERVL	37401	NM_011897	24064	Mm.89982	NM_011897	ENSMUSG00000022114	Spry2	sprouty2	sprouty RTK signaling antagonist 2	protein-coding	0.015000	0.532338			
ePOU_nocontrol_ChIP_peaks_unique-60	chr1	57700961	57701161	+	1.17062	NA	Intergenic	B4A|SINE|B4	-73800	NM_144882	67198	Mm.159989	NM_144882	ENSMUSG00000038305	Spats2l	2810022L02Rik|A230104H11Rik|AA987173|AI480531|AI842453|AW413586	spermatogenesis associated, serine-rich 2-like	protein-coding	0.010000	0.388060			
Oct4_nocontrol_ChIP_peaks_unique-80	chr6	35177498	35177698	+	1.17062	NA	promoter-TSS (NM_027513)	promoter-TSS (NM_027513)	-18	NM_027513	70699	Mm.261208	NM_027513	ENSMUSG00000038759	Nup205	3830404O05Rik|AV248391|mKIAA0225	nucleoporin 205	protein-coding	0.130000	0.736318			
ePOU_nocontrol_ChIP_peaks_unique-2889	chr9	61890167	61890367	+	1.17062	NA	Intergenic	Intergenic	24243	NM_018853	56040	Mm.3158	NM_018853	ENSMUSG00000007892	Rplp1	2410042H16Rik|Arpp1|C430017H15Rik	ribosomal protein, large, P1	protein-coding	0.025000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-1886	chr3	52212410	52212610	+	1.17062	NA	Intergenic	Intergenic	-55827	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding	0.010000	0.427861			59(TCATTCTCATTAACAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-795	chr13	17993205	17993405	+	1.17062	NA	promoter-TSS (NM_025904)	promoter-TSS (NM_025904)	46	NM_025904	67008	Mm.252918	NM_025904	ENSMUSG00000075054	Yae1d1	1600012F09Rik	Yae1 domain containing 1	protein-coding	0.125000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-2824	chr8	128030673	128030873	+	1.17062	NA	Intergenic	Intergenic	247452	NR_105822	102465212		NR_105822	ENSMUSG00000099326	Mir21c	Gm28013|mmu-mir-21c	microRNA 21c	ncRNA	0.025000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-490	chr11	58954494	58954694	+	1.17062	NA	promoter-TSS (NM_178218)	promoter-TSS (NM_178218)	-82	NR_134309	382522	Mm.377898	NR_134309	ENSMUSG00000080712	Hist3h2bb-ps	4930534G10Rik|4933432H21|B2Hist3h2bb|Hist3h2bb|R75370	histone cluster 3, H2bb, pseudogene	pseudo	0.045000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-1926	chr3	70316865	70317065	+	1.17062	NA	Intergenic	MIR|SINE|MIR	309352	NM_001018031	229389	Mm.331071	NM_001018031	ENSMUSG00000027788	Otol1	Gm414	otolin 1	protein-coding	0.000000	0.308458			
ePOU_nocontrol_ChIP_peaks_unique-407	chr10	128270449	128270649	+	1.17062	NA	promoter-TSS (NM_019963)	promoter-TSS (NM_019963)	51	NM_019963	20847	Mm.293120	NM_019963	ENSMUSG00000040033	Stat2	1600010G07Rik|AW496480	signal transducer and activator of transcription 2	protein-coding	0.105000	0.656716			
ePOU_nocontrol_ChIP_peaks_unique-1386	chr17	77844348	77844548	+	1.17062	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-355800	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding	0.000000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-952	chr14	34363524	34363724	+	1.17062	NA	Intergenic	Intergenic	-8231	NM_183278	69134	Mm.27156	NM_183278	ENSMUSG00000043681	Fam25c	2200001I15Rik|Fam25	family with sequence similarity 25, member C	protein-coding	0.055000	0.592040			
ePOU_nocontrol_ChIP_peaks_unique-1838	chr2	174295369	174295569	+	1.17062	NA	promoter-TSS (NR_002846)	promoter-TSS (NR_002846)	-33	NR_002846	56802	Mm.125770	NR_002846	ENSMUSG00000086537	Gnasas1	Gnas-as|Nespas|Nespos	GNAS antisense RNA 1	ncRNA	0.075000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-713	chr12	76499236	76499436	+	1.17062	NA	Intergenic	Intergenic	33876	NR_039597	100628604		NR_039597	ENSMUSG00000092738	Mir5135	mir-5135|mmu-mir-5135|mu-mir-5135	microRNA 5135	ncRNA	0.035000	0.402985			-39(ATTACCATGAGTAAAA,-,0.00)
Oct4_nocontrol_ChIP_peaks_unique-6	chr1	134346591	134346791	+	1.17062	NA	non-coding (NR_151737, exon 9 of 9)	non-coding (NR_151737, exon 9 of 9)	-13763	NM_001144855	68507	Mm.295105	NM_001144855	ENSMUSG00000026458	Ppfia4	100042382|1110008G13Rik|AI448359|AI852265|C81506|Gm3812	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4	protein-coding	0.005000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-833	chr13	49421077	49421277	+	1.17062	NA	promoter-TSS (NM_001276399)	promoter-TSS (NM_001276399)	-46	NM_199056	75678	Mm.390586	NM_199056	ENSMUSG00000021385	Ippk	1810043M15Rik|InsP6	inositol 1,3,4,5,6-pentakisphosphate 2-kinase	protein-coding	0.100000	0.656716			
ePOU_nocontrol_ChIP_peaks_unique-1304	chr17	4908231	4908431	+	1.17062	NA	Intergenic	CpG	-86743	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|BAF250B|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding	0.160000	0.791045			
ePOU_nocontrol_ChIP_peaks_unique-2794	chr8	106343498	106343698	+	1.17062	NA	Intergenic	Intergenic	-5633	NM_021491	58994	Mm.23298	NM_021491	ENSMUSG00000031906	Smpd3	4631433G07Rik|AI427456|AW537966|fro|nSMase2	sphingomyelin phosphodiesterase 3, neutral	protein-coding	0.005000	0.437811			-96(TATTAGTTTTTCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1327	chr17	24669380	24669580	+	1.17062	NA	promoter-TSS (NM_001348231)	promoter-TSS (NM_001348231)	-207	NM_183149	213753	Mm.219581	NM_183149	ENSMUSG00000041130	Zfp598	BC023040|Ntrap|Znf598	zinc finger protein 598	protein-coding	0.055000	0.527363			
ePOU_nocontrol_ChIP_peaks_unique-1888	chr3	52295955	52296155	+	1.17062	NA	intron (NM_019739, intron 1 of 2)	intron (NM_019739, intron 1 of 2)	27718	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding	0.010000	0.343284			-29(TTATTTTTATTTAGAT,+,0.00)
Oct4_nocontrol_ChIP_peaks_unique-43	chr16	87001115	87001315	+	1.17062	NA	Intergenic	Intergenic	127224	NR_153792	102635567	Mm.233725	NR_153792	ENSMUSG00000116979	Gm32865	-	predicted gene, 32865	ncRNA	0.005000	0.422886	-10(TTTGCATAATGGATT,+,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-491	chr11	58977733	58977933	+	1.17062	NA	promoter-TSS (NM_001290988)	promoter-TSS (NM_001290988)	-260	NM_001290988	94091	Mm.248049	NM_053168	ENSMUSG00000020455	Trim11	-	tripartite motif-containing 11	protein-coding	0.045000	0.552239			
ePOU_nocontrol_ChIP_peaks_unique-2547	chr7	4658878	4659078	+	1.17062	NA	promoter-TSS (NM_172894)	promoter-TSS (NM_172894)	-28	NM_172894	243819	Mm.258670	NM_172894	ENSMUSG00000052296	Ppp6r1	2010309P17Rik|AI836219|B430201G11Rik|D030074N20Rik|Pp6r1|Saps1|mKIAA1115	protein phosphatase 6, regulatory subunit 1	protein-coding	0.115000	0.706468			
ePOU_nocontrol_ChIP_peaks_unique-2705	chr8	26119117	26119317	+	1.17062	NA	promoter-TSS (NM_207659)	promoter-TSS (NM_207659)	7	NM_207659	320191	Mm.334464	NM_207659	ENSMUSG00000037234	Hook3	5830454D03Rik|AI317159|E330005F07Rik	hook microtubule tethering protein 3	protein-coding	0.170000	0.776119			
ePOU_nocontrol_ChIP_peaks_unique-1739	chr2	106003158	106003358	+	1.17062	NA	non-coding (NR_033993, exon 1 of 4)	non-coding (NR_033993, exon 1 of 4)	291	NM_026992	99349	Mm.25661	NM_026992	ENSMUSG00000027166	Dnajc24	1700030A21Rik|2610027M02Rik|AV066965|AW240712|Dph4|MmDjC7|Zcsl3	DnaJ heat shock protein family (Hsp40) member C24	protein-coding	0.065000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-2314	chr5	108668902	108669102	+	1.17062	NA	TTS (NM_001310692)	TTS (NM_001310692)	5794	NM_001310692	231583	Mm.440571	NM_174870	ENSMUSG00000046959	Slc26a1	Sat1	solute carrier family 26 (sulfate transporter), member 1	protein-coding	0.030000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-1728	chr2	97365091	97365291	+	1.17062	NA	intron (NM_001289742, intron 5 of 7)	intron (NM_001289742, intron 5 of 7)	-102466	NM_001289744	241568	Mm.241682	NM_178725	ENSMUSG00000050587	Lrrc4c	6430556C10Rik|NGL-1	leucine rich repeat containing 4C	protein-coding	0.000000	0.348259			
merged_common-93	chr15	23404159	23404359	+	1.17062	NA	intron (NM_001081299, intron 7 of 11)	intron (NM_001081299, intron 7 of 11)	367796	NM_001081299	320865	Mm.241965	NM_001081299	ENSMUSG00000040420	Cdh18	B230220E17Rik|Cdh14l|Tg(GFAP-APOE_i4)1Hol	cadherin 18	protein-coding	0.005000	0.318408			-19(ATTAGCATAACCATTA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2728	chr8	50425843	50426043	+	1.17062	NA	Intergenic	Intergenic	57831	NR_046067	100039954	Mm.400419	NR_046067	ENSMUSG00000110281	Gm2516	-	predicted gene 2516	ncRNA	0.000000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-1741	chr2	106822599	106822799	+	1.17062	NA	intron (NM_001356554, intron 4 of 6)	intron (NM_001356554, intron 4 of 6)	127098	NM_029837	77015	Mm.45628	NM_029837	ENSMUSG00000016386	Mpped2	239Fb|2700082O15Rik|AV354767|AW060960	metallophosphoesterase domain containing 2	protein-coding	0.005000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-808	chr13	28295499	28295699	+	1.17062	NA	Intergenic	Intergenic	153115	NM_023746	28078	Mm.155058	NM_023746	ENSMUSG00000017064	Prl5a1	1600013P04Rik|D13Wsu14e|Ghd24|PLP-L|Prlpl	prolactin family 5, subfamily a, member 1	protein-coding	0.000000	0.328358			
ePOU_nocontrol_ChIP_peaks_unique-1374	chr17	63337696	63337896	+	1.17062	NA	intron (NM_015794, intron 6 of 8)	intron (NM_015794, intron 6 of 8)	-24823	NR_130176	414079	Mm.444282	NR_130176	ENSMUSG00000090565	4930405O22Rik	-	RIKEN cDNA 4930405O22 gene	ncRNA	0.000000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-1960	chr3	96269611	96269811	+	1.16589	NA	promoter-TSS (NM_175666)	promoter-TSS (NM_175666)	11	NM_175666	319189	Mm.451071	NM_175666	ENSMUSG00000105827	Hist2h2bb	H2b-616	histone cluster 2, H2bb	protein-coding	0.060000	0.477612			
ePOU_nocontrol_ChIP_peaks_unique-1428	chr18	16469013	16469213	+	1.16589	NA	Intergenic	ORR1D1|LTR|ERVL-MaLR	340133	NM_007664	12558	Mm.257437	NM_007664	ENSMUSG00000024304	Cdh2	CDHN|N-CAD|Ncad	cadherin 2	protein-coding	0.010000	0.452736			47(GTATTGCAATGCTAAT,+,0.00),80(GTTTGCATGACAGGGT,-,0.00)
Oct4_nocontrol_ChIP_peaks_unique-62	chr3	130289207	130289407	+	1.16589	NA	intron (NM_029838, intron 2 of 37)	intron (NM_029838, intron 2 of 37)	108462	NM_001244952	77018	Mm.91728	NM_029838	ENSMUSG00000058897	Col25a1	2700062B08Rik|CLAC-P	collagen, type XXV, alpha 1	protein-coding	0.010000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-372	chr10	95514882	95515082	+	1.16589	NA	promoter-TSS (NM_080560)	promoter-TSS (NM_080560)	-180	NM_080560	93765	Mm.371667	NM_080560	ENSMUSG00000074781	Ube2n	1500026J17Rik|AL022654|BB101821|UBC13	ubiquitin-conjugating enzyme E2N	protein-coding	0.110000	0.741294			
merged_common-27	chr10	92163078	92163278	+	1.16589	NA	intron (NR_028262, intron 2 of 12)	intron (NR_028262, intron 2 of 12)	2000	NR_028262	110333	Mm.429764	NR_028262	ENSMUSG00000112117	Rmst	100041799|AI853140|C230053E11Rik|D930049J19Rik|Dmt2|Gm3515|M2|Ncrms	rhabdomyosarcoma 2 associated transcript (non-coding RNA)	ncRNA	0.015000	0.437811			
merged_common-14	chr1	178484315	178484515	+	1.16589	NA	TTS (NM_026626)	TTS (NM_026626)	-44710	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding	0.000000	0.378109			
Oct4_nocontrol_ChIP_peaks_unique-82	chr6	117879443	117879643	+	1.16589	NA	Intergenic	CpG	16662	NM_001001792	22685	Mm.249661	NM_008616	ENSMUSG00000042097	Zfp239	Mok-2|Mok2|Znf239	zinc finger protein 239	protein-coding	0.145000	0.716418			
Oct4_nocontrol_ChIP_peaks_unique-42	chr16	68328359	68328559	+	1.16589	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-707551	NM_178721	239857	Mm.394300	NM_178721	ENSMUSG00000064115	Cadm2	2900078E11Rik|9330131D06|A830029E02Rik|Igdf4d|Igsf4d|NECL3|SynCAM 2|SynCAM2	cell adhesion molecule 2	protein-coding	0.010000	0.233831		-98(TATGCATATGTACA,+,0.00),-98(TATGCATATGTACA,-,0.00)	
merged_common-95	chr15	25460185	25460385	+	1.16589	NA	Intergenic	Intergenic	46093	NR_027376	432939	Mm.146555	NM_001013791		Gm5468	100040583|EG432939	predicted gene 5468	ncRNA	0.010000	0.363184		-35(TATGAATATTTATC,+,0.00),-35(TATGAATATTTATC,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1296	chr16	95778647	95778847	+	1.16589	NA	Intergenic	Intergenic	76340	NM_011809	23872	Mm.290207	NM_011809	ENSMUSG00000022895	Ets2	AU022856|Ets-2	E26 avian leukemia oncogene 2, 3' domain	protein-coding	0.010000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-509	chr11	67017844	67018044	+	1.16589	NA	Intergenic	Intergenic	-7210	NM_177392	338369	Mm.128138	NM_177392	ENSMUSG00000050270	Tmem220	-	transmembrane protein 220	protein-coding	0.010000	0.497512			
merged_common-94	chr15	23581846	23582046	+	1.16589	NA	Intergenic	Intergenic	545483	NM_001081299	320865	Mm.241965	NM_001081299	ENSMUSG00000040420	Cdh18	B230220E17Rik|Cdh14l|Tg(GFAP-APOE_i4)1Hol	cadherin 18	protein-coding	0.005000	0.353234			
merged_common-182	chr4	126103723	126103923	+	1.16589	NA	promoter-TSS (NM_001145827)	promoter-TSS (NM_001145827)	-134	NM_001145827	74178	Mm.440269	NM_028800	ENSMUSG00000042608	Stk40	2310004N11Rik|AI428792	serine/threonine kinase 40	protein-coding	0.050000	0.577114			
ePOU_nocontrol_ChIP_peaks_unique-2801	chr8	110808451	110808651	+	1.16589	NA	Intergenic	Intergenic	-2627	NM_001135100	76527	Mm.77697	NM_029646	ENSMUSG00000031750	Il34	2010004A03Rik|AI593503	interleukin 34	protein-coding	0.020000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-1358	chr17	45873570	45873770	+	1.16589	NA	Intergenic	Intergenic	7782	NR_152136	75154	Mm.399341	NR_152136		4930542M03Rik	-	RIKEN cDNA 4930542M03 gene	ncRNA	0.030000	0.537313			
ePOU_nocontrol_ChIP_peaks_unique-1727	chr2	94010731	94010931	+	1.16589	NA	promoter-TSS (NM_026944)	promoter-TSS (NM_026944)	-101	NM_026944	69113	Mm.272498	NM_026944	ENSMUSG00000040174	Alkbh3	1700108H04Rik|1810020C19Rik|Abh3|mABH3	alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase	protein-coding	0.075000	0.616915			
ePOU_nocontrol_ChIP_peaks_unique-2604	chr7	73595216	73595416	+	1.16589	NA	Intergenic	Intergenic	-36921	NR_037569	69170	Mm.34539	NR_037569	ENSMUSG00000101970	1810026B05Rik	-	RIKEN cDNA 1810026B05 gene	ncRNA	0.060000	0.626866			
merged_common-138	chr2	29835573	29835773	+	1.16589	NA	intron (NM_026615, intron 2 of 4)	intron (NM_026615, intron 2 of 4)	8284	NM_026615	68205	Mm.20273	NM_026615	ENSMUSG00000069020	Urm1	2900073H19Rik	ubiquitin related modifier 1	protein-coding	0.010000	0.482587			85(CCATTCACTTGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2659	chr7	122969794	122969994	+	1.16589	NA	promoter-TSS (NM_011247)	promoter-TSS (NM_011247)	565	NR_045614	73951	Mm.389936	NR_045614		4930413G21Rik	-	RIKEN cDNA 4930413G21 gene	ncRNA	0.155000	0.766169			
merged_common-96	chr15	36469192	36469392	+	1.16589	NA	Intergenic	Intergenic	27442	NM_001358006	68839	Mm.396537	NM_175134	ENSMUSG00000048307	Ankrd46	1110054N06Rik|AI314978|AI987733	ankyrin repeat domain 46	protein-coding	0.010000	0.452736			-79(CTTTTGTCTTGCAAAC,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2722	chr8	46781213	46781413	+	1.16589	NA	intron (NM_008391, intron 1 of 8)	MER5B|DNA|hAT-Charlie	41568	NR_152560	16363	Mm.1149	NM_008391	ENSMUSG00000031627	Irf2	9830146E22Rik|AI646973|Irf-2	interferon regulatory factor 2	protein-coding	0.015000	0.477612			
ePOU_nocontrol_ChIP_peaks_unique-2027	chr3	149567166	149567366	+	1.16589	NA	Intergenic	Intergenic	292529	NR_040591	381482	Mm.393866	NR_040591		Gm1653	-	predicted gene 1653	ncRNA	0.000000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-1614	chr2	3912723	3912923	+	1.16589	NA	Intergenic	RLTR13B3|LTR|ERVK	-104860	NM_001347086	209630	Mm.37932	NM_172475	ENSMUSG00000026657	Frmd4a	2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294	FERM domain containing 4A	protein-coding	0.005000	0.398010	-14(ATTGCATAATTCATG,+,0.00),-14(ATTGCATAATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2261	chr5	65795982	65796182	+	1.16589	NA	intron (NM_001024917, intron 8 of 19)	B3|SINE|B2	32561	NM_001024917	333789	Mm.332398	NM_001024917	ENSMUSG00000037795	N4bp2	B3bp|E430014I16|Gm1791|Gm868	NEDD4 binding protein 2	protein-coding	0.005000	0.417910			-48(CTTTTCTTATGTTCAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1069	chr15	19391275	19391475	+	1.16589	NA	Intergenic	RLTR25B|LTR|ERVK	206002	NR_155419	102639102	Mm.463245	NR_155419	ENSMUSG00000115803	Gm35496	-	predicted gene, 35496	ncRNA	0.005000	0.363184			40(GGATTGATATGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-561	chr11	88411941	88412141	+	1.16589	NA	intron (NM_054043, intron 8 of 13)	intron (NM_054043, intron 8 of 13)	59268	NR_039545	100628571		NR_039545	ENSMUSG00000092985	Mir378b	mir-378b|mmu-mir-378b	microRNA 378b	ncRNA	0.005000	0.343284			-23(ATTAGCAAGTCAAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2451	chr6	63862616	63862816	+	1.16589	NA	intron (NM_001370966, intron 2 of 15)	intron (NM_001370966, intron 2 of 15)	606710	NM_008167	14804	Mm.439651	NM_008167	ENSMUSG00000071424	Grid2	B230104L07Rik|GluD2|GluRdelta2|Lc|Lc<J>|MMS10-AC|Ms10ac|cpr|ho|nmf408|tpr	glutamate receptor, ionotropic, delta 2	protein-coding	0.005000	0.398010	22(TATGTTTTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2369	chr5	142178154	142178354	+	1.16589	NA	intron (NM_177879, intron 40 of 44)	intron (NM_177879, intron 40 of 44)	-223243	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|Gm10868|Mnf	forkhead box K1	protein-coding	0.025000	0.452736	31(AATGATTTATTCACG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2327	chr5	118273499	118273699	+	1.16589	NA	Intergenic	Intergenic	28372	NM_001081236	76792	Mm.103428	NM_001081236	ENSMUSG00000032840	2410131K14Rik	-	RIKEN cDNA 2410131K14 gene	protein-coding	0.010000	0.547264			
ePOU_nocontrol_ChIP_peaks_unique-1000	chr14	69901480	69901680	+	1.16589	NA	intron (NM_028560, intron 3 of 6)	intron (NM_028560, intron 3 of 6)	61173	NM_028526	73523	Mm.23509	NM_028526	ENSMUSG00000022085	Pebp4	PEBP-4	phosphatidylethanolamine binding protein 4	protein-coding	0.010000	0.363184			-67(GCTTTTTTTTTTAAAT,+,0.00),-59(TTTTAAATAATAATAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1212	chr16	30771703	30771903	+	1.16589	NA	Intergenic	Intergenic	172080	NM_177632	224093	Mm.28244	NM_177632	ENSMUSG00000046546	Fam43a	Tuf1	family with sequence similarity 43, member A	protein-coding	0.020000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-2397	chr6	22032511	22032711	+	1.16589	NA	intron (NM_001081351, intron 2 of 21)	intron (NM_001081351, intron 2 of 21)	46701	NM_001081351	214642	Mm.221404	NM_001081351	ENSMUSG00000062980	Cped1	6720481P07|A430107O13Rik|AI552584	cadherin-like and PC-esterase domain containing 1	protein-coding	0.000000	0.273632			
ePOU_nocontrol_ChIP_peaks_unique-1134	chr15	76625947	76626147	+	1.16589	NA	promoter-TSS (NM_001305668)	promoter-TSS (NM_001305668)	37	NM_025842	66914	Mm.30028	NM_025842	ENSMUSG00000115987	Vps28	1110014J03Rik|CIIA|D730005C08Rik	vacuolar protein sorting 28	protein-coding	0.085000	0.606965			
merged_common-224	chr8	3500280	3500480	+	1.16589	NA	promoter-TSS (NM_053177)	promoter-TSS (NM_053177)	-139	NM_053177	94178	Mm.8356	NM_053177	ENSMUSG00000004567	Mcoln1	2210015I05Rik|TRPML1|mucolipidin	mucolipin 1	protein-coding	0.080000	0.606965			
ePOU_nocontrol_ChIP_peaks_unique-1775	chr2	130629891	130630091	+	1.16589	NA	promoter-TSS (NM_001255994)	promoter-TSS (NM_001255994)	11	NM_001146084	380601	Mm.27090	NM_198176	ENSMUSG00000079043	Fastkd5	C78212|mKIAA1792	FAST kinase domains 5	protein-coding	0.085000	0.621891			
ePOU_nocontrol_ChIP_peaks_unique-2702	chr8	23562085	23562285	+	1.16589	NA	Intergenic	Intergenic	-107476	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding	0.010000	0.477612			
merged_common-195	chr5	88554161	88554361	+	1.16589	NA	promoter-TSS (NM_023054)	promoter-TSS (NM_023054)	-201	NM_023054	65961	Mm.490364	NM_023054	ENSMUSG00000070697	Utp3	2400011K09Rik|AW557551|C87704|Crl-1|Crl1|Crlz1|Sas10	UTP3 small subunit processome component	protein-coding	0.110000	0.601990			
Oct4_nocontrol_ChIP_peaks_unique-86	chr7	28358306	28358506	+	1.16589	NA	Intergenic	Intergenic	6866	NR_028129	100302567		NR_028129		AF357399	MBI-142	snoRNA AF357399	snoRNA	0.005000	0.447761			
merged_common-7	chr1	75317796	75317996	+	1.16589	NA	promoter-TSS (NM_001110831)	promoter-TSS (NM_001110831)	-259	NM_001110831	13437	Mm.24680	NM_016878	ENSMUSG00000026209	Dnpep	AA407814	aspartyl aminopeptidase	protein-coding	0.090000	0.681592			
ePOU_nocontrol_ChIP_peaks_unique-1542	chr19	14765579	14765779	+	1.16589	NA	Intergenic	Intergenic	-167496	NM_001302950	21888	Mm.103638	NM_011600	ENSMUSG00000024642	Tle4	5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333|grg-4	transducin-like enhancer of split 4	protein-coding	0.015000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-1354	chr17	42476052	42476252	+	1.16589	NA	intron (NM_001355270, intron 2 of 2)	intron (NM_001355270, intron 2 of 2)	135161	NM_181753	353344	Mm.184937	NM_181753	ENSMUSG00000043972	Opn5	Gpr136|Neuropsin|PGR12|TMEM13	opsin 5	protein-coding	0.005000	0.393035			-10(TCATTGTAATGTTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1982	chr3	109936491	109936691	+	1.16589	NA	intron (NM_030699, intron 2 of 7)	MER2|DNA|TcMar-Tigger	206881	NM_001163350	80883	Mm.39262	NM_030699	ENSMUSG00000059857	Ntng1	A930010C08Rik|AI853992|Lmnt1	netrin G1	protein-coding	0.020000	0.402985			60(TAAATGTTATGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-982	chr14	62761256	62761456	+	1.16589	NA	promoter-TSS (NM_008715)	promoter-TSS (NM_008715)	-244	NM_008715	18130	Mm.319684	NM_008715	ENSMUSG00000035161	Ints6	2900075H24Rik|AI480962|DICE1|Ddx26|HDB|Notch2l	integrator complex subunit 6	protein-coding	0.120000	0.721393			
ePOU_nocontrol_ChIP_peaks_unique-1541	chr19	14666666	14666866	+	1.16589	NA	Intergenic	Intergenic	-68583	NM_001302950	21888	Mm.103638	NM_011600	ENSMUSG00000024642	Tle4	5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333|grg-4	transducin-like enhancer of split 4	protein-coding	0.000000	0.457711			-19(ATATGCATAAATATGA,-,0.00)
merged_common-35	chr11	19174698	19174898	+	1.16589	NA	Intergenic	Intergenic	109523	NR_046037	74059	Mm.292321	NR_046037	ENSMUSG00000086025	4933406G16Rik	-	RIKEN cDNA 4933406G16 gene	ncRNA	0.025000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-1564	chr19	32346246	32346446	+	1.16589	NA	intron (NM_001362423, intron 2 of 9)	intron (NM_001362423, intron 2 of 9)	2970	NM_001168525	208449	Mm.329810	NM_144792	ENSMUSG00000040451	Sgms1	9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23	sphingomyelin synthase 1	protein-coding	0.010000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-1676	chr2	49810037	49810237	+	1.16589	NA	intron (NM_027990, intron 1 of 9)	intron (NM_027990, intron 1 of 9)	22451	NM_027990	71897	Mm.41381	NM_027990	ENSMUSG00000026765	Lypd6b	2310010M24Rik|AW049525	LY6/PLAUR domain containing 6B	protein-coding	0.000000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-266	chr10	20451832	20452032	+	1.16589	NA	intron (NM_001347366, intron 2 of 11)	intron (NM_001347366, intron 2 of 11)	96396	NM_001347366	29863	Mm.425617	NM_013875	ENSMUSG00000019990	Pde7b	-	phosphodiesterase 7B	protein-coding	0.005000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-1910	chr3	65642836	65643036	+	1.16589	NA	Intergenic	Intergenic	-16352	NR_106200	102465905		NR_106200	ENSMUSG00000098944	Mir8120	Gm27637|mmu-mir-8120	microRNA 8120	ncRNA	0.000000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-616	chr11	116853398	116853598	+	1.16589	NA	promoter-TSS (NM_178620)	promoter-TSS (NM_178620)	-264	NM_001361585	69900	Mm.348004	NM_178620	ENSMUSG00000020818	Mfsd11	2600014M03Rik	major facilitator superfamily domain containing 11	protein-coding	0.090000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-1983	chr3	109980475	109980675	+	1.16589	NA	intron (NM_030699, intron 2 of 7)	intron (NM_030699, intron 2 of 7)	162897	NM_001163350	80883	Mm.39262	NM_030699	ENSMUSG00000059857	Ntng1	A930010C08Rik|AI853992|Lmnt1	netrin G1	protein-coding	0.000000	0.338308	31(GATGCATTATATATT,-,0.00),50(CATGCCTTATTCATA,+,0.00),50(CATGCCTTATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1369	chr17	56054849	56055049	+	1.16589	NA	intron (NM_013733, intron 3 of 13)	RMER12|LTR|ERVK	14533	NM_013733	27221	Mm.391010	NM_013733	ENSMUSG00000002835	Chaf1a	AL023013|AL024058|CAF-1|Cac1p	chromatin assembly factor 1, subunit A (p150)	protein-coding	0.000000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-2973	chrX	7806256	7806456	+	1.16589	NA	promoter-TSS (NR_035430)	promoter-TSS (NR_035430)	-745	NR_035430	100316807		NR_035430	ENSMUSG00000080645	Mir1198	Mirn1198|mmu-mir-1198	microRNA 1198	ncRNA	0.005000	0.378109	-65(CATGAATAATGCAAT,+,0.00),-65(CATGAATAATGCAAT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2063	chr4	20568355	20568555	+	1.16589	NA	intron (NM_172987, intron 1 of 4)	L1_Mur2|LINE|L1	210213	NM_172987	269513	Mm.317473	NM_172987	ENSMUSG00000055761	Nkain3	C530048M05|E130310K16Rik	Na+/K+ transporting ATPase interacting 3	protein-coding	0.000000	0.343284			29(ATATGAAAGACAGAGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2407	chr6	31121306	31121506	+	1.16589	NA	intron (NR_110471, intron 3 of 3)	L1MA4|LINE|L1	-58313	NR_029532	387223		NR_029532	ENSMUSG00000065604	Mir29b-1	Mirn29b|Mirn29b-1|mir-29b-1	microRNA 29b-1	ncRNA	0.015000	0.422886		70(CATGCATATGGACA,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2782	chr8	92628930	92629130	+	1.16589	NA	Intergenic	Intergenic	-45259	NM_001301137	64379	Mm.137247	NM_022428	ENSMUSG00000031738	Irx6	-	Iroquois homeobox 6	protein-coding	0.005000	0.378109			20(TTTTTAATATGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-740	chr12	86864279	86864479	+	1.16589	NA	Intergenic	Intergenic	20435	NM_145836	238330	Mm.248358	NM_145836	ENSMUSG00000034168	Irf2bpl	6430527G18Rik|Eap1	interferon regulatory factor 2 binding protein-like	protein-coding	0.005000	0.437811			
merged_common-152	chr2	153003628	153003828	+	1.16589	NA	TTS (NM_029064)	TTS (NM_029064)	11655	NM_178939	68559	Mm.12746	NM_178939	ENSMUSG00000027472	Pdrg1	1110004D19Rik|AU020945|AV006589|Pdrg	p53 and DNA damage regulated 1	protein-coding	0.025000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-947	chr14	31786624	31786824	+	1.16589	NA	intron (NM_001024604, intron 1 of 27)	intron (NM_001024604, intron 1 of 27)	43691	NM_001024604	105522	Mm.37660	NM_001024604	ENSMUSG00000014496	Ankrd28	AI465466|AI604979|E430019N21Rik|mKIAA0379	ankyrin repeat domain 28	protein-coding	0.015000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-1263	chr16	65868877	65869077	+	1.16589	NA	Intergenic	Intergenic	53788	NM_028572	73569	Mm.25670	NM_028572	ENSMUSG00000091243	Vgll3	1700110N18Rik|4832416J22|C80713|Vgl-3|Vito-2	vestigial like family member 3	protein-coding	0.005000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-391	chr10	111257477	111257677	+	1.16589	NA	intron (NM_001003717, intron 4 of 22)	B4|SINE|B4	-41102	NM_027914	71769	Mm.45256	NM_027914	ENSMUSG00000035759	Bbs10	1300007O09Rik|AI452285	Bardet-Biedl syndrome 10 (human)	protein-coding	0.005000	0.447761			-69(ATTAGAATTACAATCA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-89	chr1	75343056	75343256	+	1.16589	NA	Intergenic	Intergenic	-17136	NM_010043	13346	Mm.6712	NM_010043	ENSMUSG00000026208	Des	-	desmin	protein-coding	0.015000	0.368159			
merged_common-194	chr5	76984359	76984559	+	1.16589	NA	intron (NM_025691, intron 8 of 18)	intron (NM_025691, intron 8 of 18)	9758	NM_025691	66661	Mm.296976	NM_025691	ENSMUSG00000036323	Srp72	5730576P14Rik|72kDa|AI132477|BC019196|C77589	signal recognition particle 72	protein-coding	0.015000	0.358209			14(TTTTCCATGACAAAAA,-,0.00)
merged_common-174	chr4	50511406	50511606	+	1.16589	NA	Intergenic	Intergenic	-665737	NM_001276355	242443	Mm.440095	NM_001033351	ENSMUSG00000039579	Grin3a	6430537F04|A830097C19Rik|NMDAR-L|NR3A|mKIAA1973	glutamate receptor ionotropic, NMDA3A	protein-coding	0.005000	0.333333			20(ATCTGCATAATAATTG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1453	chr18	39360231	39360431	+	1.16589	NA	intron (NM_175164, intron 21 of 22)	intron (NM_175164, intron 21 of 22)	128948	NM_008173	14815	Mm.129481	NM_008173	ENSMUSG00000024431	Nr3c1	GR|Grl-1|Grl1	nuclear receptor subfamily 3, group C, member 1	protein-coding	0.010000	0.402985			21(ATATGCAAAACAAATA,-,0.00)
merged_common-242	chrX	7869976	7870176	+	1.16589	NA	intron (NM_001290537, intron 6 of 9)	L1MC3|LINE|L1	-8230	NM_138606	18715	Mm.347478	NM_138606	ENSMUSG00000031155	Pim2	DXCch3|Pim-2	proviral integration site 2	protein-coding	0.005000	0.348259			75(TCTTTGTTTTGTAAAG,+,0.00)
merged_common-128	chr19	7144020	7144220	+	1.14092	NA	intron (NM_134147, intron 3 of 10)	intron (NM_134147, intron 3 of 10)	-38391	NM_201411	396184	Mm.386930	NM_201411	ENSMUSG00000047787	Flrt1	AW742165|D630040I23Rik	fibronectin leucine rich transmembrane protein 1	protein-coding	0.065000	0.601990		-18(CATGAATATGCAAA,+,0.00),-18(CATGAATATGCAAA,-,0.00)	
merged_common-39	chr11	52011479	52011679	+	1.12485	NA	intron (NR_156698, intron 3 of 13)	intron (NR_156698, intron 3 of 13)	7358	NM_001166656	213084	Mm.280557	NM_153785	ENSMUSG00000020389	Cdkl3	AI852479|B230379H01Rik	cyclin-dependent kinase-like 3	protein-coding	0.005000	0.363184			
ePOU_nocontrol_ChIP_peaks_unique-264	chr10	18999997	19000197	+	1.12485	NA	TTS (NM_009397)	TTS (NM_009397)	11866	NM_001166402	21929	Mm.116683	NM_009397	ENSMUSG00000019850	Tnfaip3	A20|Tnfip3	tumor necrosis factor, alpha-induced protein 3	protein-coding	0.000000	0.358209	42(ATTGCATTATTCATG,+,0.00),42(ATTGCATTATTCATG,-,0.00)		
merged_common-77	chr13	52562206	52562406	+	1.10513	NA	Intergenic	Intergenic	10919	NR_046069	100040572	Mm.278873	NR_046069		Gm2848	-	predicted gene 2848	ncRNA	0.015000	0.398010			-32(TTTTTGTTATTCAAAT,+,0.00),31(ATTTGCATAGCAAAGA,-,0.00),62(ATTATCATAACAATAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2899	chr9	66593124	66593324	+	1.10513	NA	promoter-TSS (NM_001302122)	promoter-TSS (NM_001302122)	-109	NM_144937	235441	Mm.32465	NM_144937	ENSMUSG00000032376	Usp3	AA409661|BC017156	ubiquitin specific peptidase 3	protein-coding	0.065000	0.656716			
merged_common-203	chr5	144083574	144083774	+	1.10513	NA	Intergenic	Intergenic	-16687	NM_001081109	231876	Mm.288726	NM_001081109	ENSMUSG00000038970	Lmtk2	2900041G10Rik|A330101P12Rik|BREK|KPI-2|KPI2|aatyk2|cprk	lemur tyrosine kinase 2	protein-coding	0.005000	0.368159		16(CATGAATATGCATG,+,0.00),16(CATGAATATGCATG,-,0.00),37(CATGAATATGCATA,+,0.00),37(CATGAATATGCATA,-,0.00),43(TATGCATATGCGTA,+,0.00),43(TATGCATATGCGTA,-,0.00)	
merged_common-219	chr7	95480173	95480373	+	1.10513	NA	Intergenic	Intergenic	-690971	NM_001310762	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding	0.010000	0.383085			-82(GCAATTTTATGTAAAT,+,0.00),38(ATTTGCATGAAAATAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1576	chr19	38224055	38224255	+	1.10513	NA	promoter-TSS (NM_001081075)	promoter-TSS (NM_001081075)	-3	NM_001081075	70567	Mm.30607	NM_027466	ENSMUSG00000054237	Fra10ac1	5730455O13Rik|AI448293	FRA10AC1 homolog (human)	protein-coding	0.135000	0.701493			
merged_common-225	chr8	35883323	35883523	+	1.06136	NA	promoter-TSS (NR_046181)	promoter-TSS (NR_046181)	-466	NR_046181	330737	Mm.381743	NR_046181	ENSMUSG00000109761	5430403N17Rik	5430403N17	RIKEN cDNA 5430403N17 gene	ncRNA	0.005000	0.432836		-81(AATGAATATTCAGC,+,0.00),-81(AATGAATATTCAGC,-,0.00)	
merged_common-131	chr2	6594704	6594904	+	1.06136	NA	intron (NM_001160293, intron 8 of 13)	intron (NM_001160293, intron 8 of 13)	126858	NM_001310447	14007	Mm.398543	NM_010160	ENSMUSG00000002107	Celf2	B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3	CUGBP, Elav-like family member 2	protein-coding	0.000000	0.323383			-2(ATCTGCATATCAATAA,-,0.00)
merged_common-50	chr11	110781835	110782035	+	1.06136	NA	Intergenic	Intergenic	-186098	NM_001252207	16517	Mm.30176	NM_010604	ENSMUSG00000051497	Kcnj16	6430410F18Rik|AI132396|Kir5.1	potassium inwardly-rectifying channel, subfamily J, member 16	protein-coding	0.000000	0.472637			-63(ATTAACATCACAAAGG,-,0.00)
Oct4_nocontrol_ChIP_peaks_unique-92	chr7	127113752	127113952	+	1.06136	NA	intron (NM_133686, intron 1 of 3)	L1MA8|LINE|L1	8177	NM_133686	67375	Mm.26928	NM_133686	ENSMUSG00000030674	Qprt	2410027J01Rik|AI647766|QPRTase	quinolinate phosphoribosyltransferase	protein-coding	0.020000	0.497512		-24(ATTGCATATTCATG,+,0.00),-24(ATTGCATATTCATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1274	chr16	74995772	74995972	+	1.06136	NA	intron (NM_001358491, intron 1 of 27)	intron (NM_001358491, intron 1 of 27)	96898	NM_001358491	268902	Mm.171736	NM_175549	ENSMUSG00000052516	Robo2	2600013A04Rik|9430089E08Rik|BB097918|D230004I22Rik|mKIAA1568	roundabout guidance receptor 2	protein-coding	0.010000	0.343284			
merged_common-123	chr18	24188994	24189194	+	1.06136	NA	Intergenic	Intergenic	-16250	NM_013814	14423	Mm.30249	NM_013814	ENSMUSG00000000420	Galnt1	-	polypeptide N-acetylgalactosaminyltransferase 1	protein-coding	0.010000	0.427861			-94(ATTTTGTAAGGCAAAT,+,0.00)
merged_common-132	chr2	13416995	13417195	+	1.06136	NA	intron (NM_001081084, intron 27 of 66)	intron (NM_001081084, intron 27 of 66)	74781	NM_001081084	65969	Mm.313915	NM_001081084	ENSMUSG00000026726	Cubn	AA408369|AL022750|D2Wsu88e	cubilin (intrinsic factor-cobalamin receptor)	protein-coding	0.000000	0.412935		-98(AATGAATTTGCATG,+,0.00),-98(AATGAATTTGCATG,-,0.00)	
merged_common-112	chr16	65815134	65815334	+	1.06136	NA	promoter-TSS (NM_001368760)	promoter-TSS (NM_001368760)	45	NM_028572	73569	Mm.25670	NM_028572	ENSMUSG00000091243	Vgll3	1700110N18Rik|4832416J22|C80713|Vgl-3|Vito-2	vestigial like family member 3	protein-coding	0.080000	0.666667			
Oct4_nocontrol_ChIP_peaks_unique-47	chr17	63220429	63220629	+	1.06136	NA	intron (NM_015794, intron 7 of 8)	intron (NM_015794, intron 7 of 8)	92444	NR_130176	414079	Mm.444282	NR_130176	ENSMUSG00000090565	4930405O22Rik	-	RIKEN cDNA 4930405O22 gene	ncRNA	0.000000	0.323383			-37(ATTTAAATAACAGAAT,-,0.00),17(TTTTTGACTTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-381	chr10	102524298	102524498	+	1.06136	NA	intron (NM_146240, intron 1 of 1)	intron (NM_146240, intron 1 of 1)	12176	NM_146240	237504	Mm.282672	NM_146240	ENSMUSG00000044921	Rassf9	AW322107|Pamci	Ras association (RalGDS/AF-6) domain family (N-terminal) member 9	protein-coding	0.005000	0.358209			-97(GCTTTGTGTTGTAGAT,+,0.00),-32(ATATGCATAATAAGGG,-,0.00)
merged_common-188	chr5	3911295	3911495	+	1.06136	NA	Intergenic	Intergenic	-16791	NM_194462	100986	Mm.46044	NM_194462	ENSMUSG00000040407	Akap9	5730481H23Rik|AKAP-9|AKAP450|AW545847|C79026|G1-448-15|PRKA9|mKIAA0803|mei2-5|repro12	A kinase (PRKA) anchor protein (yotiao) 9	protein-coding	0.000000	0.328358			-50(CTATTGATATGTAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2781	chr8	91278134	91278334	+	1.06136	NA	intron (NM_173431, intron 10 of 25)	intron (NM_173431, intron 10 of 25)	34988	NM_173431	244585	Mm.324592	NM_173431	ENSMUSG00000033282	Rpgrip1l	1700047E16Rik|4931437C01|Ftm|Nphp8	Rpgrip1-like	protein-coding	0.010000	0.358209	17(GCTGAATTATGCATT,+,0.00),17(GCTGAATTATGCATT,-,0.00)		
merged_common-75	chr13	42655206	42655406	+	1.06136	NA	Intergenic	Intergenic	-25493	NM_001302635	218194	Mm.160124	NM_198419	ENSMUSG00000054728	Phactr1	9630030F18Rik|Rpel1	phosphatase and actin regulator 1	protein-coding	0.005000	0.283582			-21(ACTTTGTTATTCAAAC,+,0.00)
merged_common-66	chr12	101852047	101852247	+	1.06136	NA	intron (NM_028446, intron 16 of 20)	intron (NM_028446, intron 16 of 20)	-33028	NM_011812	23876	Mm.288381	NM_011812	ENSMUSG00000021186	Fbln5	A55|DANCE|EVEC	fibulin 5	protein-coding	0.000000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-1561	chr19	29285733	29285933	+	1.06136	NA	intron (NM_001048177, intron 8 of 23)	intron (NM_001048177, intron 8 of 23)	34030	NM_008413	16452	Mm.275839	NM_008413	ENSMUSG00000024789	Jak2	Fd17	Janus kinase 2	protein-coding	0.005000	0.467662			-21(CTATTGTTGTGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-908	chr13	113442751	113442951	+	1.06136	NA	Intergenic	Intergenic	59993	NR_045501	70917	Mm.491036	NR_045501	ENSMUSG00000114790	4921509O07Rik	-	RIKEN cDNA 4921509O07 gene	ncRNA	0.000000	0.298507			15(ATATGCAAAAATATGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2759	chr8	72553012	72553212	+	1.05606	NA	Intergenic	ORR1D2-int|LTR|ERVL-MaLR	-4802	NM_027485	70625	Mm.235885	NM_027485	ENSMUSG00000045248	Med26	5730493L18Rik|AI414941|AW495270|Crsp7	mediator complex subunit 26	protein-coding	0.005000	0.407960		16(TTTGCATAAGCATT,+,0.00)	15(ATTTGCATAAGCATTG,-,0.00)
merged_common-178	chr4	86241916	86242116	+	1.05606	NA	intron (NM_029967, intron 9 of 27)	intron (NM_029967, intron 9 of 27)	188041	NM_001368621	77739	Mm.331690	NM_029967	ENSMUSG00000066113	Adamtsl1	5930437A14Rik|6720426B09Rik|ADAMTSL-1	ADAMTS-like 1	protein-coding	0.010000	0.368159			27(GCATTGTGAGGCAAAT,+,0.00)
Oct4_nocontrol_ChIP_peaks_unique-4	chr1	132417491	132417691	+	1.03671	NA	5' UTR (NM_172516, exon 1 of 13)	5' UTR (NM_172516, exon 1 of 13)	138	NM_172516	213452	Mm.257120	NM_172516	ENSMUSG00000042046	Dstyk	A930019K20Rik|C430014H23Rik|C820013G01|Ripk5	dual serine/threonine and tyrosine protein kinase	protein-coding	0.135000	0.756219			
ePOU_nocontrol_ChIP_peaks_unique-1415	chr17	93203267	93203467	+	1.03671	NA	intron (NM_009625, intron 4 of 4)	intron (NM_009625, intron 4 of 4)	4199	NM_001315504	11516	Mm.3407	NM_009625	ENSMUSG00000024256	Adcyap1	PACAP	adenylate cyclase activating polypeptide 1	protein-coding	0.030000	0.393035	30(CATGAATAATTCATG,+,0.00),30(CATGAATAATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2976	chrX	20658099	20658299	+	1.03671	NA	promoter-TSS (NM_009457)	promoter-TSS (NM_009457)	-103	NM_001276316	22201	Mm.1104	NM_009457	ENSMUSG00000001924	Uba1	A1S9|Sbx|Ube-1|Ube1x	ubiquitin-like modifier activating enzyme 1	protein-coding	0.030000	0.492537			
ePOU_nocontrol_ChIP_peaks_unique-2347	chr5	134350733	134350933	+	1.03671	NA	Intergenic	Intergenic	24379	NR_039544	100628570		NR_039544	ENSMUSG00000093311	Mir3965	mmu-mir-3965|mu-mir-3965	microRNA 3965	ncRNA	0.030000	0.562189			
ePOU_nocontrol_ChIP_peaks_unique-1612	chr2	3280772	3280972	+	1.03671	NA	Intergenic	L1MB2|LINE|L1	-3340	NM_001290368	18108	Mm.65021	NM_008708	ENSMUSG00000026643	Nmt2	A930001K02Rik|AI605445|AU044698|hNMT-2	N-myristoyltransferase 2	protein-coding	0.010000	0.328358			
merged_common-214	chr7	16365194	16365394	+	1.03671	NA	intron (NM_019748, intron 5 of 8)	intron (NM_019748, intron 5 of 8)	22602	NM_019748	56459	Mm.258530	NM_019748	ENSMUSG00000052833	Sae1	2400010M20Rik|2610044L12Rik|AL033372|AOS1|AW743391|D7Ertd177e|HSPC140|Sua1|Uble1a	SUMO1 activating enzyme subunit 1	protein-coding	0.000000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-2372	chr5	143048597	143048797	+	1.03671	NA	intron (NM_207110, intron 13 of 16)	intron (NM_207110, intron 13 of 16)	64323	NM_207110	108086	Mm.381440	NM_080561	ENSMUSG00000045078	Rnf216	2810055G22Rik|AI647468|AU019462|C86502|F830018F18Rik|TRIAD3|UIP83|Ubce7ip1	ring finger protein 216	protein-coding	0.000000	0.358209		-85(ATTAAATATGCATG,+,0.00),-85(ATTAAATATGCATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1890	chr3	53204978	53205178	+	1.03671	NA	intron (NM_175386, intron 2 of 3)	intron (NM_175386, intron 2 of 3)	163531	NM_175386	108927	Mm.118617	NM_175386	ENSMUSG00000048332	Lhfp	2810489O06Rik|AI194968|Lhfpl6	lipoma HMGIC fusion partner	protein-coding	0.005000	0.323383			
ePOU_nocontrol_ChIP_peaks_unique-1605	chr19	57323354	57323554	+	1.03671	NA	non-coding (NR_040316, exon 3 of 3)	non-coding (NR_040316, exon 3 of 3)	-8535	NM_001362445	226251	Mm.217161	NM_178688	ENSMUSG00000025085	Ablim1	2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059	actin-binding LIM protein 1	protein-coding	0.010000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-2579	chr7	44305119	44305319	+	1.03671	NA	intron (NM_009131, intron 3 of 3)	intron (NM_009131, intron 3 of 3)	1740	NM_009131	20256	Mm.20428	NM_009131	ENSMUSG00000004473	Clec11a	AW457320|Clecsf3|Scgf	C-type lectin domain family 11, member a	protein-coding	0.050000	0.616915			
ePOU_nocontrol_ChIP_peaks_unique-1598	chr19	51516652	51516852	+	1.03671	NA	Intergenic	Intergenic	-747545	NM_008386	16333	Mm.46269	NM_008386	ENSMUSG00000035804	Ins1	Ins-1|Ins2-rs1	insulin I	protein-coding	0.000000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-194	chr1	171715470	171715670	+	1.03671	NA	Intergenic	RLTR22_Mus|LTR|ERVK	33578	NM_007649	12506	Mm.1738	NM_007649	ENSMUSG00000015355	Cd48	AI449234|AW610730|BCM1|BLAST|BLAST-1|BLAST1|Bcm-1|MEM-102|SLAMF2|Sgp-60	CD48 antigen	protein-coding	0.005000	0.348259		45(CTTACATATGCATA,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2699	chr8	22411353	22411553	+	1.03671	NA	5' UTR (NM_020560, exon 1 of 7)	5' UTR (NM_020560, exon 1 of 7)	113	NM_020560	57312	Mm.289402	NM_020560	ENSMUSG00000031533	Mrps31	1500002D03Rik|AA960481|Imogen38|Imogen44	mitochondrial ribosomal protein S31	protein-coding	0.060000	0.557214			
ePOU_nocontrol_ChIP_peaks_unique-1190	chr16	13903150	13903350	+	1.03671	NA	promoter-TSS (NM_001289562)	promoter-TSS (NM_001289562)	89	NM_001289562	93734	Mm.76554	NM_033564	ENSMUSG00000022679	Mpv17l	M-LP	Mpv17 transgene, kidney disease mutant-like	protein-coding	0.085000	0.592040			
ePOU_nocontrol_ChIP_peaks_unique-1516	chr19	4169213	4169413	+	1.03671	NA	intron (NM_134148, intron 9 of 9)	intron (NM_134148, intron 9 of 9)	-5930	NM_021485	58988	Mm.271937	NM_021485	ENSMUSG00000024830	Rps6kb2	S6K-beta-2|S6K2	ribosomal protein S6 kinase, polypeptide 2	protein-coding	0.025000	0.482587			
merged_common-88	chr14	25318060	25318260	+	1.03671	NA	Intergenic	Intergenic	-141025	NM_183208	328365	Mm.227484	NM_183208	ENSMUSG00000007817	Zmiz1	BC065120|E330020C23|Gm10397|I920194n01|Rai17|Zimp10	zinc finger, MIZ-type containing 1	protein-coding	0.045000	0.601990			
ePOU_nocontrol_ChIP_peaks_unique-1486	chr18	68243602	68243802	+	1.03671	NA	intron (NM_172631, intron 4 of 5)	intron (NM_172631, intron 4 of 5)	15756	NM_001357444	52662	Mm.440183	NM_172631	ENSMUSG00000024544	Ldlrad4	8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik	low density lipoprotein receptor class A domain containing 4	protein-coding	0.005000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-1853	chr3	19894996	19895196	+	1.03671	NA	non-coding (NR_027985, exon 1 of 1)	non-coding (NR_027985, exon 1 of 1)	225	NR_027985	70808	Mm.427103	NR_027985	ENSMUSG00000048106	4632415L05Rik	AI662792	RRS1 ribosome biogenesis regulator homolog pseudogene	pseudo	0.090000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-1705	chr2	71872977	71873177	+	1.03671	NA	promoter-TSS (NM_172665)	promoter-TSS (NM_172665)	-147	NM_172665	228026	Mm.34411	NM_172665	ENSMUSG00000006494	Pdk1	B830012B01|D530020C15Rik	pyruvate dehydrogenase kinase, isoenzyme 1	protein-coding	0.070000	0.631841			
ePOU_nocontrol_ChIP_peaks_unique-2536	chr6	141285314	141285514	+	1.03671	NA	intron (NM_018779, intron 1 of 15)	intron (NM_018779, intron 1 of 15)	36145	NM_018779	54611	Mm.103728	NM_018779	ENSMUSG00000041741	Pde3a	A930022O17Rik|C87899	phosphodiesterase 3A, cGMP inhibited	protein-coding	0.000000	0.368159			58(TAATTGTTTTTAAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1746	chr2	112230797	112230997	+	1.03671	NA	Intergenic	Intergenic	-8944	NM_207206	99010	Mm.33438	NM_207206	ENSMUSG00000027134	Lpcat4	AI505034|Agpat7|Aytl3|LPEAT2	lysophosphatidylcholine acyltransferase 4	protein-coding	0.000000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-154	chr1	144084747	144084947	+	1.03671	NA	Intergenic	Intergenic	-80698	NM_009061	19735	Mm.28262	NM_009061	ENSMUSG00000026360	Rgs2	GOS8	regulator of G-protein signaling 2	protein-coding	0.025000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-223	chr1	184968598	184968798	+	1.03671	NA	intron (NM_145515, intron 1 of 17)	intron (NM_145515, intron 1 of 17)	30851	NM_145515	226778	Mm.7445	NM_145515	ENSMUSG00000026620	Mark1	AW491150|B930025N23Rik|Emk3|Par-1c|mKIAA1477|mPar-1c	MAP/microtubule affinity regulating kinase 1	protein-coding	0.015000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-1791	chr2	135584354	135584554	+	1.03671	NA	Intergenic	Intergenic	-1234	NR_015544	320684	Mm.421433	NR_015544	ENSMUSG00000085631	9630028H03Rik	-	RIKEN cDNA 9630028H03 gene	ncRNA	0.000000	0.298507			-69(AATAGAAAGAGAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-877	chr13	93500310	93500510	+	1.03671	NA	promoter-TSS (NM_021310)	promoter-TSS (NM_021310)	-602	NM_021310	57748	Mm.100273	NM_021310	ENSMUSG00000021690	Jmy	-	junction-mediating and regulatory protein	protein-coding	0.010000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-1834	chr2	169999071	169999271	+	1.03671	NA	intron (NM_001363022, intron 2 of 2)	intron (NM_001363022, intron 2 of 2)	-35984	NR_131974	446211	Mm.266854	NR_131974	ENSMUSG00000103935	AY702102	STDP1	cDNA sequence AY702102	ncRNA	0.030000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-803	chr13	23412595	23412795	+	1.03671	NA	Intergenic	Intergenic	11171	NM_013924	30946	Mm.292094	NM_013924	ENSMUSG00000036376	Abt1	-	activator of basal transcription 1	protein-coding	0.040000	0.472637			
ePOU_nocontrol_ChIP_peaks_unique-1440	chr18	30353624	30353824	+	1.03671	NA	Intergenic	Intergenic	80859	NR_151699	225326	Mm.194127	NM_181414	ENSMUSG00000033628	Pik3c3	5330434F23Rik|Vps34	phosphatidylinositol 3-kinase catalytic subunit type 3	protein-coding	0.005000	0.333333		-28(CATATATATGCATA,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2793	chr8	105860424	105860624	+	1.03671	NA	promoter-TSS (NM_026532)	promoter-TSS (NM_026532)	-9	NM_001357229	68051	Mm.455474	NM_026532	ENSMUSG00000008450	Nutf2	2700067I02Rik|AI115459|AI413596|AW546000|Ntf2|Ntf3|PP15	nuclear transport factor 2	protein-coding	0.070000	0.597015			
ePOU_nocontrol_ChIP_peaks_unique-376	chr10	99107023	99107223	+	1.03671	NA	promoter-TSS (NM_027740)	promoter-TSS (NM_027740)	41	NR_153333	382406	Mm.440656	NM_027740	ENSMUSG00000019952	Poc1b	4933430F16Rik|Wdr51b	POC1 centriolar protein B	protein-coding	0.140000	0.761194			
merged_common-144	chr2	81849099	81849299	+	1.03671	NA	Intergenic	Lx9|LINE|L1	-204459	NM_175513	241514	Mm.119383	NM_175513	ENSMUSG00000070866	Zfp804a	C630007C17Rik|Znf804a	zinc finger protein 804A	protein-coding	0.005000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-1176	chr16	3914021	3914221	+	1.03671	NA	intron (NM_029738, intron 3 of 11)	RLTR13D3|LTR|ERVK	5112	NM_029738	76779	Mm.458921	NM_029738	ENSMUSG00000014232	Cluap1	2310030D15Rik|2610111M03Rik	clusterin associated protein 1	protein-coding	0.000000	0.432836	-50(CATGAATAATGCAAT,+,0.00),-50(CATGAATAATGCAAT,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1718	chr2	80548180	80548380	+	1.03671	NA	intron (NM_001355410, intron 8 of 31)	intron (NM_001355410, intron 8 of 31)	32902	NM_001355411	50884	Mm.25203	NM_016965	ENSMUSG00000027002	Nckap1	C79304|H19|Hem-2|Hem2|Nap1|mKIAA0587|mh19|p125Nap1	NCK-associated protein 1	protein-coding	0.005000	0.353234			
ePOU_nocontrol_ChIP_peaks_unique-2818	chr8	125735347	125735547	+	1.03671	NA	intron (NM_001310688, intron 1 of 3)	intron (NM_001310688, intron 1 of 3)	1244	NM_025636	66566	Mm.25296	NM_025636	ENSMUSG00000031851	Ntpcr	2310079N02Rik|AI449709	nucleoside-triphosphatase, cancer-related	protein-coding	0.005000	0.437811			78(TGTTTGGGATGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2661	chr7	127208930	127209130	+	1.03671	NA	promoter-TSS (NM_144522)	promoter-TSS (NM_144522)	131	NM_001347655	17907	Mm.14526	NM_016754	ENSMUSG00000030672	Mylpf	2410014J02Rik|MLC-2|Mlc2	myosin light chain, phosphorylatable, fast skeletal muscle	protein-coding	0.020000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-2751	chr8	70839504	70839704	+	1.03671	NA	5' UTR (NM_027560, exon 1 of 8)	5' UTR (NM_027560, exon 1 of 8)	116	NM_027560	70807	Mm.24215	NM_027560	ENSMUSG00000002910	Arrdc2	4632416I05Rik|Ilad1	arrestin domain containing 2	protein-coding	0.075000	0.611940			
ePOU_nocontrol_ChIP_peaks_unique-2060	chr4	15958146	15958346	+	1.03671	NA	intron (NM_013752, intron 1 of 15)	CpG	279	NM_013752	27354	Mm.20866	NM_013752	ENSMUSG00000028224	Nbn	Nbs1	nibrin	protein-coding	0.115000	0.721393			
ePOU_nocontrol_ChIP_peaks_unique-659	chr12	31654680	31654880	+	1.03671	NA	promoter-TSS (NM_028002)	promoter-TSS (NM_028002)	46	NM_028002	71916	Mm.62979	NM_028002	ENSMUSG00000020648	Dus4l	2310069P03Rik|2700089B10Rik|AI482040|Pp35	dihydrouridine synthase 4-like (S. cerevisiae)	protein-coding	0.105000	0.631841			
ePOU_nocontrol_ChIP_peaks_unique-1153	chr15	93275287	93275487	+	1.03671	NA	promoter-TSS (NM_001033275)	promoter-TSS (NM_001033275)	-208	NM_001033275	223827	Mm.22819	NM_001033275	ENSMUSG00000036197	Gxylt1	Glt8d3|Gm1228|Gm87	glucoside xylosyltransferase 1	protein-coding	0.100000	0.731343			
ePOU_nocontrol_ChIP_peaks_unique-1616	chr2	4626483	4626683	+	1.03671	NA	intron (NM_001356451, intron 10 of 10)	intron (NM_001356451, intron 10 of 10)	25552	NM_001356451	67229	Mm.38529	NM_026045	ENSMUSG00000039449	Prpf18	2810441A10Rik	pre-mRNA processing factor 18	protein-coding	0.015000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-651	chr12	24831401	24831601	+	1.03671	NA	promoter-TSS (NM_001083341)	promoter-TSS (NM_001083341)	-98	NM_001083341	67216	Mm.167671	NM_026037	ENSMUSG00000020646	Mboat2	2810049G06Rik|AU022889|AW547221|LPCAT4|Moact2|Oact2	membrane bound O-acyltransferase domain containing 2	protein-coding	0.145000	0.800995			
ePOU_nocontrol_ChIP_peaks_unique-351	chr10	80399429	80399629	+	1.03671	NA	promoter-TSS (NM_001306143)	promoter-TSS (NM_001306143)	2	NM_001306143	17192	Mm.7142	NM_013595	ENSMUSG00000035478	Mbd3	AI181826|AU019209	methyl-CpG binding domain protein 3	protein-coding	0.115000	0.726368			
ePOU_nocontrol_ChIP_peaks_unique-2084	chr4	52798037	52798237	+	1.03671	NA	Intergenic	Intergenic	-16467	NR_040661	75367	Mm.159510	NR_040661	ENSMUSG00000089717	4930552N02Rik	-	RIKEN cDNA 4930552N02 gene	ncRNA	0.005000	0.258706			
ePOU_nocontrol_ChIP_peaks_unique-863	chr13	81973604	81973804	+	1.03671	NA	Intergenic	Intergenic	190457	NM_007684	12626	Mm.12481	NM_007684	ENSMUSG00000021537	Cetn3	MmCEN3	centrin 3	protein-coding	0.025000	0.388060			-13(AATTACAAGACAATAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2196	chr5	12766147	12766347	+	1.03671	NA	Intergenic	Intergenic	383081	NM_028882	108151	Mm.89313	NM_028882	ENSMUSG00000040254	Sema3d	4631426B19Rik	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D	protein-coding	0.000000	0.358209			-93(TTTTTGTTTTTCATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2105	chr4	80864780	80864980	+	1.03671	NA	Intergenic	Intergenic	30667	NM_001282014	22178	Mm.30438	NM_031202	ENSMUSG00000005994	Tyrp1	Oca3|TRP-1|TRP1|Tyrp|b|brown|isa	tyrosinase-related protein 1	protein-coding	0.035000	0.562189			
merged_common-238	chr9	86732898	86733098	+	1.03671	NA	Intergenic	L1MC|LINE|L1	-10635	NM_178738	244954	Mm.257629	NM_178738	ENSMUSG00000033491	Prss35	6030424L22Rik|P3D9	protease, serine 35	protein-coding	0.005000	0.338308		-47(CATGAATATGCATT,+,0.00),-47(CATGAATATGCATT,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1629	chr2	15055390	15055590	+	1.03671	NA	promoter-TSS (NM_001165941)	promoter-TSS (NM_001165941)	170	NM_029466	75869	Mm.174068	NM_029466	ENSMUSG00000017418	Arl5b	4930587A11Rik|AW146430|Arl8	ADP-ribosylation factor-like 5B	protein-coding	0.100000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-1846	chr3	8923680	8923880	+	1.03671	NA	promoter-TSS (NM_025434)	promoter-TSS (NM_025434)	77	NM_025434	66230	Mm.38460	NM_025434	ENSMUSG00000040269	Mrps28	1500012D08Rik|AW061224	mitochondrial ribosomal protein S28	protein-coding	0.090000	0.641791			
merged_common-179	chr4	87865897	87866097	+	1.03671	NA	intron (NM_027326, intron 4 of 10)	L1MC5|LINE|L1	-59674	NM_001286158	70122	Mm.288898	NM_027326	ENSMUSG00000028496	Mllt3	2210011H10Rik|2610012I03Rik|3830408D16Rik|Af9|D4Ertd321e	myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3	protein-coding	0.015000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-429	chr11	17658350	17658550	+	1.03671	NA	Intergenic	Intergenic	295425	NM_026576	68145	Mm.178684	NM_026576	ENSMUSG00000016984	Etaa1	5730466H23Rik|AA672646	Ewing tumor-associated antigen 1	protein-coding	0.010000	0.398010		2(CATGAATATTCAAG,+,0.00),2(CATGAATATTCAAG,-,0.00),33(CATGAATATTCAAA,+,0.00),33(CATGAATATTCAAA,-,0.00)	-52(TAATTCCTGTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-95	chr1	82429072	82429272	+	1.03671	NA	intron (NM_029777, intron 6 of 6)	intron (NM_029777, intron 6 of 6)	90123	NM_001122685	76867	Mm.226994	NM_029777	ENSMUSG00000026142	Rhbdd1	4930418P06Rik|RRP4|mRHBDD1	rhomboid domain containing 1	protein-coding	0.000000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-1289	chr16	90144134	90144334	+	1.03671	NA	non-coding (NR_033476, exon 1 of 1)	non-coding (NR_033476, exon 1 of 1)	1997	NR_033476	100038709	Mm.484070	NR_033476		Gm10789	-	predicted gene 10789	ncRNA	0.090000	0.636816			
ePOU_nocontrol_ChIP_peaks_unique-10	chr1	12886717	12886917	+	1.03671	NA	intron (NM_172841, intron 5 of 8)	intron (NM_172841, intron 5 of 8)	104318	NM_172841	240726	Mm.24481	NM_172841	ENSMUSG00000025938	Slco5a1	4732454B15|A630033C23Rik|AA407151	solute carrier organic anion transporter family, member 5A1	protein-coding	0.015000	0.398010			66(ATCTTCATAATAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1920	chr3	68587889	68588089	+	1.03671	NA	intron (NM_013928, intron 1 of 6)	intron (NM_013928, intron 1 of 6)	15621	NM_013928	30953	Mm.331064	NM_013928	ENSMUSG00000027777	Schip1	Nf2ip|Schip-1	schwannomin interacting protein 1	protein-coding	0.020000	0.497512			45(ATTACCAAGGCAAAGC,-,0.00)
merged_common-184	chr4	141999656	141999856	+	1.03671	NA	intron (NM_177868, intron 2 of 31)	intron (NM_177868, intron 2 of 31)	11895	NM_177868	329977	Mm.252019	NM_028429	ENSMUSG00000051435	Fhad1	2900090M10Rik|B230311F11	forkhead-associated (FHA) phosphopeptide binding domain 1	protein-coding	0.015000	0.398010		-44(TTTGCATATGTATA,+,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-145	chr1	134361681	134361881	+	1.03671	NA	exon (NM_020588, exon 1 of 8)	exon (NM_020588, exon 1 of 8)	218	NM_001042485	57439	Mm.393140	NM_020588	ENSMUSG00000042305	Tmem183a	1300007B12Rik|1700020N19Rik|Tmem183	transmembrane protein 183A	protein-coding	0.125000	0.791045			
ePOU_nocontrol_ChIP_peaks_unique-1778	chr2	130916503	130916703	+	1.03671	NA	intron (NM_009730, intron 1 of 28)	intron (NM_009730, intron 1 of 28)	10108	NM_009730	11990	Mm.119936	NM_009730	ENSMUSG00000027312	Atrn	AW558010|Mgca|mg	attractin	protein-coding	0.015000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-1766	chr2	126835274	126835474	+	1.03671	NA	intron (NM_021450, intron 12 of 38)	intron (NM_021450, intron 12 of 38)	40887	NM_021450	58800	Mm.244705	NM_021450	ENSMUSG00000027365	Trpm7	2310022G15Rik|4833414K03Rik|5033407O22Rik|CHAK|CHAK1|LTrpC-7|Ltpr7|Ltrpc7|TRPPLIK	transient receptor potential cation channel, subfamily M, member 7	protein-coding	0.000000	0.363184		8(TAAGCATATGCATT,+,0.00),8(TAAGCATATGCATT,-,0.00)	36(ATTTAAAAGACAATAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2897	chr9	66124741	66124941	+	1.03671	NA	promoter-TSS (NM_019727)	promoter-TSS (NM_019727)	45	NM_019727	56440	Mm.271891	NM_019727	ENSMUSG00000032382	Snx1	-	sorting nexin 1	protein-coding	0.065000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-842	chr13	58011939	58012139	+	1.03671	NA	intron (NM_001362415, intron 12 of 14)	intron (NM_001362415, intron 12 of 14)	11161	NR_030544	100124491		NR_030544	ENSMUSG00000077962	Mir874	Mirn874|mir-874|mmu-mir-874	microRNA 874	ncRNA	0.015000	0.497512			
ePOU_nocontrol_ChIP_peaks_unique-1695	chr2	61711641	61711841	+	1.03671	NA	promoter-TSS (NM_021526)	promoter-TSS (NM_021526)	47	NM_021526	59029	Mm.218198	NM_021526	ENSMUSG00000026914	Psmd14	2610312C03Rik|3200001M20Rik|AA986732|Pad1|Poh1|rpm11	proteasome (prosome, macropain) 26S subunit, non-ATPase, 14	protein-coding	0.075000	0.651741			
merged_common-87	chr14	24148907	24149107	+	1.03671	NA	intron (NM_027726, intron 22 of 30)	intron (NM_027726, intron 22 of 30)	60130	NR_106069	102465697		NR_106069	ENSMUSG00000105723	Mir7210	mir-7210|mmu-mir-7210	microRNA 7210	ncRNA	0.000000	0.512438			-38(ATCTGCATGACACTGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1840	chr2	180693575	180693775	+	1.03671	NA	intron (NM_177852, intron 1 of 14)	intron (NM_177852, intron 1 of 14)	-1627	NR_111965	23856	Mm.253836	NM_011805	ENSMUSG00000038914	Dido1	6720461J16Rik|D130048F08Rik|DATF-1|DIO-1|Datf1|dido	death inducer-obliterator 1	protein-coding	0.000000	0.273632			
ePOU_nocontrol_ChIP_peaks_unique-1899	chr3	56772557	56772757	+	1.03671	NA	Intergenic	Intergenic	529331	NM_001355130	17112	Mm.856	NM_008536	ENSMUSG00000027800	Tm4sf1	L6|M3s1	transmembrane 4 superfamily member 1	protein-coding	0.005000	0.308458			
ePOU_nocontrol_ChIP_peaks_unique-2641	chr7	110018360	110018560	+	1.03671	NA	exon (NM_001362172, exon 1 of 25)	exon (NM_001362172, exon 1 of 25)	145	NM_001362172	233726	Mm.222328	NM_181517	ENSMUSG00000066232	Ipo7	A330055O14Rik|C330016G14|Imp7|Ranbp7	importin 7	protein-coding	0.095000	0.681592			
ePOU_nocontrol_ChIP_peaks_unique-718	chr12	77852742	77852942	+	1.03671	NA	Intergenic	Intergenic	-373813	NM_145965	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding	0.020000	0.472637			
ePOU_nocontrol_ChIP_peaks_unique-1255	chr16	56037590	56037790	+	1.03671	NA	promoter-TSS (NM_029092)	promoter-TSS (NM_029092)	96	NM_029092	52575	Mm.288742	NM_029092	ENSMUSG00000044763	Trmt10c	1300018J16Rik|D16Ertd454e|Rg9mtd1|Rnmtd1	tRNA methyltransferase 10C, mitochondrial RNase P subunit	protein-coding	0.100000	0.716418			
merged_common-181	chr4	121098122	121098322	+	1.03671	NA	promoter-TSS (NM_172700)	promoter-TSS (NM_172700)	-12	NM_172700	230709	Mm.34399	NM_172700	ENSMUSG00000043207	Zmpste24	A530043O15Rik|D030046F19|FACE1|Face-1|MADB|STE24|Ste24p	zinc metallopeptidase, STE24	protein-coding	0.030000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-1988	chr3	116034005	116034205	+	1.03671	NA	Intergenic	RSINE1|SINE|B4	25808	NM_001163514	58193	Mm.41739	NM_021388	ENSMUSG00000027963	Extl2	3000001D04Rik|AW146439	exostoses (multiple)-like 2	protein-coding	0.010000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-1554	chr19	24024203	24024403	+	1.03671	NA	intron (NM_001114174, intron 1 of 10)	L1ME4b|LINE|L1	6716	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding	0.035000	0.447761			
ePOU_nocontrol_ChIP_peaks_unique-2051	chr4	11485713	11485913	+	1.03671	NA	promoter-TSS (NM_001347055)	promoter-TSS (NM_001347055)	-145	NM_001347055	66185	Mm.331487	NM_001081183	ENSMUSG00000040720	Virma	1110037F02Rik|4930422M05Rik|Kiaa1429|mKIAA1429	vir like m6A methyltransferase associated	protein-coding	0.085000	0.597015			
ePOU_nocontrol_ChIP_peaks_unique-1674	chr2	45747508	45747708	+	1.03671	NA	Intergenic	Intergenic	51003	NR_040497	69405	Mm.396184	NR_040497	ENSMUSG00000086202	1700019E08Rik	-	RIKEN cDNA 1700019E08 gene	ncRNA	0.025000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-1241	chr16	43193793	43193993	+	1.03671	NA	intron (NM_001285805, intron 2 of 10)	intron (NM_001285805, intron 2 of 10)	-53391	NM_181058	56490	Mm.136238	NM_019778	ENSMUSG00000022708	Zbtb20	1300017A20Rik|7330412A13Rik|A930017C21Rik|D16Wsu73e|DPZF|HOF|J20|ODA-8S|Oda8|Tg(PDGFB-APPSwInd)20Lms|Zfp288	zinc finger and BTB domain containing 20	protein-coding	0.010000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-1678	chr2	50914148	50914348	+	1.03671	NA	Intergenic	Intergenic	4564	NR_033595	227885	Mm.301654	NR_033595	ENSMUSG00000083270	Gm13498	-	heat shock protein 90 alpha (cytosolic), class B member 1 pseudogene	pseudo	0.005000	0.333333			-29(GTTTTTTTTTTTAAAT,+,0.00),20(CTTTGCATAATAATTT,-,0.00),54(AATACCATGATAAAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2325	chr5	115300943	115301143	+	1.03671	NA	promoter-TSS (NR_131932)	promoter-TSS (NR_131932)	-53	NM_019682	56455	Mm.256858	NM_019682	ENSMUSG00000009013	Dynll1	Dlc8|Dnclc1|Pin	dynein light chain LC8-type 1	protein-coding	0.125000	0.696517			
ePOU_nocontrol_ChIP_peaks_unique-810	chr13	29618841	29619041	+	1.03671	NA	intron (NR_131896, intron 9 of 16)	intron (NR_131896, intron 9 of 16)	236732	NR_131896	68916	Mm.212227	NM_144536	ENSMUSG00000006191	Cdkal1	1190005B03Rik|6620401C13Rik	CDK5 regulatory subunit associated protein 1-like 1	protein-coding	0.000000	0.358209			25(ATTTGCATTTCAATCA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-414	chr11	5741302	5741502	+	1.03671	NA	promoter-TSS (NM_001361591)	promoter-TSS (NM_001361591)	-226	NM_001361590	72046	Mm.271657	NM_178623	ENSMUSG00000049680	Urgcp	2010005J08Rik|9130001I21Rik|AW060359|Urg4|mKIAA1507	upregulator of cell proliferation	protein-coding	0.035000	0.587065			15(GCATTCTGATGTTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-856	chr13	76532105	76532305	+	1.03671	NA	intron (NM_030174, intron 1 of 20)	intron (NM_030174, intron 1 of 20)	147244	NM_030174	78771	Mm.316249	NM_030174	ENSMUSG00000021596	Mctp1	2810465F10Rik	multiple C2 domains, transmembrane 1	protein-coding	0.005000	0.308458			23(ATTTGAATTAGTAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1560	chr19	29042668	29042868	+	1.03671	NA	intron (NM_001365071, intron 1 of 4)	L1MB8|LINE|L1	-4715	NR_028360	67329	Mm.394933	NR_028360		1700018L02Rik	-	RIKEN cDNA 1700018L02 gene	ncRNA	0.020000	0.457711			
Oct4_nocontrol_ChIP_peaks_unique-50	chr18	47714533	47714733	+	1.03671	NA	intron (NR_033454, intron 2 of 5)	L1ME2|LINE|L1	74900	NR_152200	100042982	Mm.125235	NR_152200		Gm4146	Gm45939	predicted gene 4146	ncRNA	0.000000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-643	chr12	11067040	11067240	+	1.03671	NA	intron (NR_045860, intron 2 of 2)	intron (NR_045860, intron 2 of 2)	19327	NR_045860	71457	Mm.95280	NR_045860	ENSMUSG00000113620	7420701I03Rik	-	RIKEN cDNA 7420701I03 gene	ncRNA	0.010000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-2909	chr9	73686439	73686639	+	1.03671	NA	intron (NM_001081153, intron 12 of 31)	B4A|SINE|B4	282498	NM_001081153	208898	Mm.41035	NM_001081153	ENSMUSG00000062151	Unc13c	1500037O19Rik|D9Ertd414e|Munc13-3|Unc13h3	unc-13 homolog C	protein-coding	0.005000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-2059	chr4	15370665	15370865	+	1.03671	NA	Intergenic	Intergenic	104945	NM_181401	100201	Mm.394111	NM_181401	ENSMUSG00000043252	Tmem64	9630015D15Rik|AI790744|AV300874	transmembrane protein 64	protein-coding	0.000000	0.283582			-14(TTATACTCATTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-905	chr13	111423878	111424078	+	1.03671	NA	Intergenic	Intergenic	66149	NM_001361926	73274	Mm.57286	NM_028487	ENSMUSG00000032745	Gpbp1	1700034P14Rik|AU019836|D230035M11Rik|Gpbp|mGPBP	GC-rich promoter binding protein 1	protein-coding	0.010000	0.323383			-20(ATTTCCATAAATATAT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2044	chr4	5059473	5059673	+	1.03671	NA	Intergenic	Intergenic	-266267	NM_177730	242291	Mm.218889	NM_177730	ENSMUSG00000066324	Impad1	1110001C20Rik|AA408880|AI451589|AL022796|B230207P20|IMP 3|IMPase 3|Jaws|gPAPP	inositol monophosphatase domain containing 1	protein-coding	0.000000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-2089	chr4	57312457	57312657	+	1.03671	NA	Intergenic	Intergenic	-10720	NM_011207	545622	Mm.246552	NM_011207	ENSMUSG00000038764	Ptpn3	9530011I20Rik|PTP-H1|PTPCL	protein tyrosine phosphatase, non-receptor type 3	protein-coding	0.015000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-823	chr13	43171244	43171444	+	1.03671	NA	5' UTR (NM_025935, exon 1 of 8)	5' UTR (NM_025935, exon 1 of 8)	157	NM_001252639	67046	Mm.269213	NM_025935	ENSMUSG00000021368	Tbc1d7	2610009C09Rik	TBC1 domain family, member 7	protein-coding	0.095000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-1537	chr19	12573323	12573523	+	1.03671	NA	promoter-TSS (NM_026640)	promoter-TSS (NM_026640)	-87	NM_001346545	107373	Mm.1643	NM_026640	ENSMUSG00000024691	Fam111a	4632417K18Rik|AW413625	family with sequence similarity 111, member A	protein-coding	0.045000	0.552239			
ePOU_nocontrol_ChIP_peaks_unique-2650	chr7	113577091	113577291	+	1.03671	NA	Intergenic	Intergenic	-12204	NR_126544	69295	Mm.396150	NR_126544	ENSMUSG00000084984	Far1os	1700006P19Rik	fatty acyl CoA reductase 1, opposite strand	ncRNA	0.005000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-1195	chr16	17210030	17210230	+	1.03671	NA	exon (NM_001033338, exon 1 of 1)	exon (NM_001033338, exon 1 of 1)	1995	NM_001033338	239731	Mm.86671	NM_001033338	ENSMUSG00000071636	Rimbp3	Gm1759|Gm603|RIM-BP3|mKIAA1666	RIMS binding protein 3	protein-coding	0.075000	0.626866			
ePOU_nocontrol_ChIP_peaks_unique-638	chr12	4417679	4417879	+	1.03671	NA	intron (NM_010881, intron 1 of 22)	L1MA6|LINE|L1	59403	NM_010881	17977	Mm.301039	NM_010881	ENSMUSG00000020647	Ncoa1	KAT13A|NCoA-1|NRC-1|SRC-1|SRC-a|SRC1|bHLHe74|mNRC-1	nuclear receptor coactivator 1	protein-coding	0.005000	0.393035			11(ATCAAAAAGACAAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-79	chr1	69133926	69134126	+	1.03671	NA	Intergenic	Intergenic	-25967	NM_010154	13869	Mm.442420	NM_010154	ENSMUSG00000062209	Erbb4	Her4|c-erbB-4	erb-b2 receptor tyrosine kinase 4	protein-coding	0.000000	0.288557			
merged_common-170	chr4	21940734	21940934	+	1.03671	NA	intron (NM_175234, intron 2 of 5)	intron (NM_175234, intron 2 of 5)	9508	NM_175234	76132	Mm.159689	NM_175234	ENSMUSG00000028246	Faxc	6230409E13Rik|AW742931	failed axon connections homolog	protein-coding	0.005000	0.427861		12(CATGCATATGTATA,+,0.00),12(CATGCATATGTATA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1272	chr16	74467241	74467441	+	1.03671	NA	intron (NM_001358491, intron 1 of 27)	intron (NM_001358491, intron 1 of 27)	-55516	NM_175549	268902	Mm.171736	NM_175549	ENSMUSG00000052516	Robo2	2600013A04Rik|9430089E08Rik|BB097918|D230004I22Rik|mKIAA1568	roundabout guidance receptor 2	protein-coding	0.030000	0.482587			-99(TATTTGCAATGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-225	chr1	185328944	185329144	+	1.03671	NA	exon (NM_198653, exon 1 of 23)	exon (NM_198653, exon 1 of 23)	357	NM_198653	381314	Mm.275841	NM_198653	ENSMUSG00000026618	Iars2	2010002H18Rik|C79125	isoleucine-tRNA synthetase 2, mitochondrial	protein-coding	0.095000	0.711443			
ePOU_nocontrol_ChIP_peaks_unique-2772	chr8	85431556	85431756	+	1.03671	NA	intron (NM_025722, intron 1 of 3)	intron (NM_025722, intron 1 of 3)	1185	NR_033144	66714	Mm.272748	NM_025722	ENSMUSG00000036934	4921524J17Rik	-	RIKEN cDNA 4921524J17 gene	protein-coding	0.005000	0.348259	-79(AATGCATAATTCATA,+,0.00),-79(AATGCATAATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-444	chr11	25602012	25602212	+	1.03671	NA	Intergenic	Intergenic	276005	NR_045853	71234	Mm.158627	NR_045853	ENSMUSG00000033015	4933427E13Rik	-	RIKEN cDNA 4933427E13 gene	ncRNA	0.000000	0.303483	-49(AATGTAAAATGCATA,+,0.00)		18(ATTTGCATCACATTAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-246	chr10	8016658	8016858	+	1.03671	NA	Intergenic	Intergenic	-60635	NM_138667	68652	Mm.193041	NM_138667	ENSMUSG00000015755	Tab2	1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733	TGF-beta activated kinase 1/MAP3K7 binding protein 2	protein-coding	0.005000	0.318408			-64(TTTTTTTTTTTTAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-321	chr10	58446560	58446760	+	1.03671	NA	promoter-TSS (NM_011240)	promoter-TSS (NM_011240)	-192	NM_011240	19386	Mm.431695	NM_011240	ENSMUSG00000003226	Ranbp2	A430087B05Rik|AI256741|NUP358	RAN binding protein 2	protein-coding	0.060000	0.462687			
merged_common-156	chr3	24629424	24629624	+	1.03671	NA	intron (NM_001326288, intron 1 of 13)	intron (NM_001326288, intron 1 of 13)	154482	NM_001326288	635702	Mm.448351	NM_001326288	ENSMUSG00000102758	Naaladl2	2810043G22Rik|EG635702|Gm1021	N-acetylated alpha-linked acidic dipeptidase-like 2	protein-coding	0.000000	0.248756			-30(ATTTACATAATACTGT,-,0.00),40(ATGTACATAATAAAAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2704	chr8	25840737	25840937	+	1.03671	NA	promoter-TSS (NM_011791)	promoter-TSS (NM_011791)	-50	NM_011791	23808	Mm.27706	NM_011791	ENSMUSG00000031575	Ash2l	-	ASH2 like histone lysine methyltransferase complex subunit	protein-coding	0.080000	0.537313			
ePOU_nocontrol_ChIP_peaks_unique-467	chr11	40951605	40951805	+	1.03671	NA	Intergenic	L1M3f|LINE|L1	-196419	NM_009831	12450	Mm.2103	NM_009831	ENSMUSG00000020326	Ccng1	AI314029	cyclin G1	protein-coding	0.005000	0.338308			11(ATCTGCATGACAAAGC,-,0.00)
merged_common-228	chr8	70234380	70234580	+	1.03671	NA	promoter-TSS (NM_133972)	promoter-TSS (NM_133972)	-58	NM_133972	76813	Mm.383251	NM_133972	ENSMUSG00000002343	Armc6	2410153K17Rik|AW554412	armadillo repeat containing 6	protein-coding	0.110000	0.651741			
ePOU_nocontrol_ChIP_peaks_unique-1064	chr15	12306314	12306514	+	1.03671	NA	Intergenic	RSINE1|SINE|B4	-15082	NM_025673	66629	Mm.157655	NM_025673	ENSMUSG00000022200	Golph3	4733401N08Rik|5730410D03Rik|AW413496	golgi phosphoprotein 3	protein-coding	0.000000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-2485	chr6	98107688	98107888	+	1.03671	NA	Intergenic	Intergenic	116005	NM_008601	17342	Mm.333284	NM_008601	ENSMUSG00000035158	Mitf	BCC2|Bhlhe32|Gsfbcc2|Vitiligo|Wh|bw|mi|vit	melanogenesis associated transcription factor	protein-coding	0.010000	0.323383			
ePOU_nocontrol_ChIP_peaks_unique-2913	chr9	78481682	78481882	+	1.03671	NA	promoter-TSS (NM_010106)	promoter-TSS (NM_010106)	-58	NM_010106	13627	Mm.138471	NM_010106	ENSMUSG00000037742	Eef1a1	-	eukaryotic translation elongation factor 1 alpha 1	protein-coding	0.075000	0.701493			
ePOU_nocontrol_ChIP_peaks_unique-2587	chr7	49337841	49338041	+	1.03671	NA	intron (NM_175272, intron 1 of 37)	intron (NM_175272, intron 1 of 37)	91752	NM_175272	78286	Mm.333881	NM_175272	ENSMUSG00000052512	Nav2	5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015	neuron navigator 2	protein-coding	0.005000	0.417910			
ePOU_nocontrol_ChIP_peaks_unique-2826	chr9	7763943	7764143	+	1.03671	NA	promoter-TSS (NR_152989)	promoter-TSS (NR_152989)	-34	NM_133739	71929	Mm.283293	NM_133739	ENSMUSG00000050912	Tmem123	2310075C12Rik	transmembrane protein 123	protein-coding	0.060000	0.696517			
ePOU_nocontrol_ChIP_peaks_unique-2958	chr9	118506124	118506324	+	1.03671	NA	promoter-TSS (NM_018748)	promoter-TSS (NM_018748)	-94	NM_018748	54214	Mm.10409	NM_018748	ENSMUSG00000038708	Golga4	AI225887|AU019508|Olp-1	golgi autoantigen, golgin subfamily a, 4	protein-coding	0.145000	0.726368			
ePOU_nocontrol_ChIP_peaks_unique-1363	chr17	47611234	47611434	+	1.03671	NA	promoter-TSS (NM_020048)	promoter-TSS (NM_020048)	158	NM_016859	53414	Mm.472101	NM_016859	ENSMUSG00000023988	Bysl	Bys|Enp1	bystin-like	protein-coding	0.035000	0.517413			
ePOU_nocontrol_ChIP_peaks_unique-600	chr11	106240699	106240899	+	1.03671	NA	intron (NM_001361644, intron 8 of 12)	MTD|LTR|ERVL-MaLR	10133	NM_001361640	72047	Mm.41367	NM_028074	ENSMUSG00000020705	Ddx42	1810047H21Rik|AW319508|AW556242|B430002H05Rik|RHELP|RNAHP|SF3b125	DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	protein-coding	0.000000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-2673	chr7	132656342	132656542	+	1.03671	NA	intron (NM_029609, intron 6 of 6)	intron (NM_029609, intron 6 of 6)	45799	NM_029609	76429	Mm.276721	NM_029609	ENSMUSG00000030946	Lhpp	2310007H09Rik	phospholysine phosphohistidine inorganic pyrophosphate phosphatase	protein-coding	0.020000	0.567164			
ePOU_nocontrol_ChIP_peaks_unique-387	chr10	108371113	108371313	+	1.03671	NA	intron (NM_054056, intron 2 of 6)	intron (NM_054056, intron 2 of 6)	39024	NM_054056	114774	Mm.391419	NM_054056	ENSMUSG00000035873	Pawr	2310001G03Rik|PAR4|Par-4	PRKC, apoptosis, WT1, regulator	protein-coding	0.005000	0.323383			-56(CTTTGCAAGAGTATTT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2734	chr8	57595862	57596062	+	1.03671	NA	intron (NM_001167981, intron 1 of 11)	intron (NM_001167981, intron 1 of 11)	-55791	NR_040698	100502619	Mm.393851	NR_040698		AW046200	-	expressed sequence AW046200	ncRNA	0.010000	0.353234	-35(TATGAATAATGTATG,+,0.00),-35(TATGAATAATGTATG,-,0.00),-14(TATATATTATGTATG,+,0.00)	-20(CATGCATATATATT,+,0.00),-20(CATGCATATATATT,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-365	chr10	90743284	90743484	+	1.03671	NA	intron (NM_001359242, intron 3 of 10)	intron (NM_001359242, intron 3 of 10)	-86270	NM_001347054	77531	Mm.440605	NM_181398	ENSMUSG00000058589	Anks1b	AIDA-1|AIDA-1b|C030032C09Rik|E530015N03Rik|EB-1|Gm10937|Gm1555	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding	0.010000	0.353234			66(CTTTGCATAGAAATGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-403	chr10	119820904	119821104	+	1.03671	NA	intron (NM_001358811, intron 1 of 23)	intron (NM_001358811, intron 1 of 23)	1615	NM_028736	74053	Mm.196692	NM_028736	ENSMUSG00000034813	Grip1	4931400F03Rik|GRIP|eb	glutamate receptor interacting protein 1	protein-coding	0.015000	0.383085			12(GCTATCTCTTTCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1773	chr2	130424054	130424254	+	1.03671	NA	promoter-TSS (NM_030559)	promoter-TSS (NM_030559)	134	NM_178762	319513	Mm.482539	NM_178762	ENSMUSG00000037773	Pced1a	A930025D01Rik|AI480484|Fam113a	PC-esterase domain containing 1A	protein-coding	0.090000	0.661692			
ePOU_nocontrol_ChIP_peaks_unique-1103	chr15	49146679	49146879	+	1.03671	NA	Intergenic	Intergenic	-354790	NM_001081391	239420	Mm.309363	NM_001081391	ENSMUSG00000022311	Csmd3	4930500N14Rik|mKIAA1894	CUB and Sushi multiple domains 3	protein-coding	0.000000	0.278607			
ePOU_nocontrol_ChIP_peaks_unique-999	chr14	69732650	69732850	+	1.03671	NA	promoter-TSS (NR_130166)	promoter-TSS (NR_130166)	-34	NR_130166	75016	Mm.394574	NR_130157	ENSMUSG00000097284	4930480K23Rik	-	RIKEN cDNA 4930480K23 gene	ncRNA	0.100000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-164	chr1	152872237	152872437	+	1.03671	NA	intron (NM_001359257, intron 1 of 23)	L1MA6|LINE|L1	30308	NM_001359257	226517	Mm.270775	NM_001005507	ENSMUSG00000042772	Smg7	9430023P16Rik|mKIAA0250	Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)	protein-coding	0.015000	0.393035			-9(GTATTCTCATGCATAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2179	chr4	149307670	149307870	+	1.03671	NA	promoter-TSS (NM_207682)	promoter-TSS (NM_207682)	-37	NM_001290995	16561	Mm.402393	NM_008441	ENSMUSG00000063077	Kif1b	A530096N05Rik|AI448212|AI506502|D4Mil1e|KIF1Bp130|KIF1Bp204	kinesin family member 1B	protein-coding	0.130000	0.666667			
ePOU_nocontrol_ChIP_peaks_unique-1819	chr2	160863378	160863578	+	1.03671	NA	intron (NM_177263, intron 1 of 3)	ORR1C2|LTR|ERVL-MaLR	9512	NM_177263	320799	Mm.436734	NM_177263	ENSMUSG00000035877	Zhx3	1810059C13Rik|4932418O04Rik|9530010N21Rik|Tix1|mKIAA0395	zinc fingers and homeoboxes 3	protein-coding	0.000000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-613	chr11	115708556	115708756	+	1.03671	NA	promoter-TSS (NM_008163)	promoter-TSS (NM_008163)	-59	NM_008163	14784	Mm.439649	NM_008163	ENSMUSG00000059923	Grb2	AA408164|Ash	growth factor receptor bound protein 2	protein-coding	0.125000	0.736318			
ePOU_nocontrol_ChIP_peaks_unique-1638	chr2	22351189	22351389	+	1.03671	NA	intron (NM_148413, intron 14 of 19)	B4|SINE|B4	123786	NM_148413	667663	Mm.330033	NM_148413	ENSMUSG00000025716	Myo3a	9030416P08Rik	myosin IIIA	protein-coding	0.010000	0.328358			
ePOU_nocontrol_ChIP_peaks_unique-315	chr10	49052015	49052215	+	1.03671	NA	Intergenic	(CATATA)n|Simple_repeat|Simple_repeat	735822	NM_001358866	14806	Mm.185993	NM_010349	ENSMUSG00000056073	Grik2	AW124492|C130030K03Rik|GluK2|Glur-6|Glur6|Glurbeta2	glutamate receptor, ionotropic, kainate 2 (beta 2)	protein-coding	0.000000	0.283582		-28(AATATATATGCATA,+,0.00),-28(AATATATATGCATA,-,0.00),-14(TATGCATATATATT,+,0.00),-14(TATGCATATATATT,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-942	chr14	29567813	29568013	+	1.03671	NA	intron (NM_009785, intron 2 of 37)	intron (NM_009785, intron 2 of 37)	153951	NM_009785	12294	Mm.386754	NM_009785	ENSMUSG00000021991	Cacna2d3	Cacnad3|alapha2delta3	calcium channel, voltage-dependent, alpha2/delta subunit 3	protein-coding	0.010000	0.308458			-59(ATATCCATTACAAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1509	chr19	3324650	3324850	+	1.03671	NA	intron (NM_013495, intron 1 of 18)	intron (NM_013495, intron 1 of 18)	1449	NM_013495	12894	Mm.18522	NM_013495	ENSMUSG00000024900	Cpt1a	C730027G07|CPTI|Cpt1	carnitine palmitoyltransferase 1a, liver	protein-coding	0.025000	0.462687			11(CTTTTGTCATGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-663	chr12	33027227	33027427	+	1.03671	NA	Intergenic	Intergenic	65548	NM_001024478	68764	Mm.60083	NM_001024478	ENSMUSG00000035860	Cdhr3	1110049B09Rik|BB172694|Cdh28	cadherin-related family member 3	protein-coding	0.015000	0.507463			
merged_common-164	chr3	117471275	117471475	+	1.03671	NA	Intergenic	Intergenic	-103852	NM_001305451	75769	Mm.72187	NM_029425	ENSMUSG00000033342	Plppr5	4833424O15Rik|Lppr5|PRG-5|Pap2d	phospholipid phosphatase related 5	protein-coding	0.000000	0.378109			
merged_common-21	chr10	52273972	52274172	+	1.03671	NA	intron (NM_025705, intron 2 of 10)	Charlie24|DNA|hAT-Charlie	40453	NM_001347444	66686	Mm.62982	NM_025705	ENSMUSG00000019891	Dcbld1	4631413K11Rik	discoidin, CUB and LCCL domain containing 1	protein-coding	0.020000	0.472637			-43(ATTAACATAAGCATAG,-,0.00)
merged_common-53	chr11	120796296	120796496	+	1.03671	NA	promoter-TSS (NM_026824)	promoter-TSS (NM_026824)	-1	NM_026824	68730	Mm.180622	NM_026824	ENSMUSG00000025155	Dus1l	1110032N12Rik	dihydrouridine synthase 1-like (S. cerevisiae)	protein-coding	0.125000	0.691542			
merged_common-31	chr10	121420313	121420513	+	1.03671	NA	intron (NM_138956, intron 1 of 4)	intron (NM_138956, intron 1 of 4)	55323	NM_001364695	75612	Mm.207683	NM_029364	ENSMUSG00000034707	Gns	2610016K11Rik|AU042285|C87209|G6S|N28088	glucosamine (N-acetyl)-6-sulfatase	protein-coding	0.025000	0.532338			
ePOU_nocontrol_ChIP_peaks_unique-214	chr1	181842311	181842511	+	1.03671	NA	promoter-TSS (NM_133815)	promoter-TSS (NM_133815)	-10	NM_133815	98386	Mm.4538	NM_133815	ENSMUSG00000004880	Lbr	AI505894|C14SR|ic	lamin B receptor	protein-coding	0.130000	0.721393			
ePOU_nocontrol_ChIP_peaks_unique-1231	chr16	36828615	36828815	+	1.03671	NA	promoter-TSS (NM_001113401)	promoter-TSS (NM_001113401)	315	NM_177128	320299	Mm.222934	NM_177128	ENSMUSG00000022837	Iqcb1	6820449I09Rik|AV128382|NPHP5	IQ calmodulin-binding motif containing 1	protein-coding	0.075000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-426	chr11	12394334	12394534	+	1.03671	NA	intron (NM_001282993, intron 1 of 13)	intron (NM_001282993, intron 1 of 13)	17706	NM_001282994	12808	Mm.22847	NM_172496	ENSMUSG00000020173	Cobl	-	cordon-bleu WH2 repeat	protein-coding	0.005000	0.437811		-5(CTTGAATTTGCATA,+,0.00)	
merged_common-18	chr1	186261414	186261614	+	1.03671	NA	Intergenic	Intergenic	-144204	NM_146106	226791	Mm.257116	NM_146106	ENSMUSG00000039246	Lyplal1	BC027340|Q96AVO	lysophospholipase-like 1	protein-coding	0.010000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-1452	chr18	38601347	38601547	+	1.03671	NA	promoter-TSS (NM_011898)	promoter-TSS (NM_011898)	-100	NM_011898	24066	Mm.42038	NM_011898	ENSMUSG00000024427	Spry4	A030006O18Rik|sprouty4	sprouty RTK signaling antagonist 4	protein-coding	0.070000	0.587065			
ePOU_nocontrol_ChIP_peaks_unique-2827	chr9	9027497	9027697	+	1.03671	NA	intron (NM_027823, intron 11 of 22)	intron (NM_027823, intron 11 of 22)	127764	NM_008829	18667	Mm.12798	NM_008829	ENSMUSG00000031870	Pgr	9930019P03Rik|BB114106|NR3C3|PR|PR-A|PR-B	progesterone receptor	protein-coding	0.010000	0.393035			31(TTTAGCATCACAAAAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1760	chr2	119594365	119594565	+	1.03671	NA	intron (NR_027832, intron 1 of 2)	CpG	169	NR_015473	66602	Mm.379181	NR_015473	ENSMUSG00000085438	Oip5os1	1190006L01Rik|1700020I14Rik|4933437I03Rik|AI451541|AI585852|AW538376|AW558897|Cyrano|Oip5as1|linc-oip5	Opa interacting protein 5, opposite strand 1	ncRNA	0.085000	0.681592			
ePOU_nocontrol_ChIP_peaks_unique-1897	chr3	56262325	56262525	+	1.03671	NA	Intergenic	Intergenic	-78724	NM_030595	26422	Mm.384353	NM_030595	ENSMUSG00000027799	Nbea	Lyst2|mKIAA1544	neurobeachin	protein-coding	0.005000	0.407960			79(GCTTGATCATTTTAAT,+,0.00)
Oct4_nocontrol_ChIP_peaks_unique-63	chr3	157059695	157059895	+	1.03671	NA	intron (NM_001039094, intron 3 of 6)	intron (NM_001039094, intron 3 of 6)	474295	NR_152231	381498	Mm.402095	NR_152231	ENSMUSG00000105834	4930592C13Rik	Gm1657|Gm43159	RIKEN cDNA 4930592C13 gene	ncRNA	0.005000	0.323383			-58(AATTTTTCTTTCAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2777	chr8	86923414	86923614	+	1.03671	NA	Intergenic	MTE2a|LTR|ERVL-MaLR	-38256	NM_030563	80750	Mm.25117	NM_030563	ENSMUSG00000031652	N4bp1	AI481586|C81621	NEDD4 binding protein 1	protein-coding	0.010000	0.492537			
ePOU_nocontrol_ChIP_peaks_unique-313	chr10	45218055	45218255	+	1.03671	NA	Intergenic	RLTR13B3|LTR|ERVK	-71150	NM_024286	78977	Mm.24748	NM_024286	ENSMUSG00000019848	Popdc3	AA682104|Pop3	popeye domain containing 3	protein-coding	0.010000	0.447761	-84(ACTGCATTATTCATG,+,0.00),-84(ACTGCATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2426	chr6	47454645	47454845	+	1.03671	NA	promoter-TSS (NM_001355550)	promoter-TSS (NM_001355550)	-12	NM_001355550	26965	Mm.87611	NM_012042	ENSMUSG00000029686	Cul1	Cul-1	cullin 1	protein-coding	0.120000	0.771144			
ePOU_nocontrol_ChIP_peaks_unique-824	chr13	43303797	43303997	+	1.03671	NA	5' UTR (NM_001033399, exon 1 of 2)	5' UTR (NM_001033399, exon 1 of 2)	275	NM_001033399	328232	Mm.441399	NM_001033399	ENSMUSG00000051335	Gfod1	9630032O13|AI850995	glucose-fructose oxidoreductase domain containing 1	protein-coding	0.105000	0.706468			
Oct4_nocontrol_ChIP_peaks_unique-79	chr6	31386263	31386463	+	1.03671	NA	intron (NR_040300, intron 2 of 2)	intron (NR_040300, intron 2 of 2)	12410	NR_040300	100503869	Mm.370532	NR_040300	ENSMUSG00000086212	Mkln1os	Gm13845	muskelin 1, intracellular mediator containing kelch motifs, opposite strand	ncRNA	0.010000	0.383085			-52(ATTATAATAATAATGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1004	chr14	73314104	73314304	+	1.03671	NA	intron (NM_009029, intron 2 of 26)	intron (NM_009029, intron 2 of 26)	11618	NM_009029	19645	Mm.273862	NM_009029	ENSMUSG00000022105	Rb1	Rb|Rb-1|pRb|pp105	RB transcriptional corepressor 1	protein-coding	0.005000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-647	chr12	21286128	21286328	+	1.03671	NA	promoter-TSS (NM_008403)	promoter-TSS (NM_008403)	56	NM_001355609	16413	Mm.273333	NM_008403	ENSMUSG00000062352	Itgb1bp1	AI449260|AU019480|Icap1	integrin beta 1 binding protein 1	protein-coding	0.100000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-910	chr13	114158297	114158497	+	1.03671	NA	TTS (NM_172595)	TTS (NM_172595)	-6805	NR_045836	319803	Mm.386896	NM_177004	ENSMUSG00000114213	A430090L17Rik	-	RIKEN cDNA A430090L17 gene	ncRNA	0.025000	0.492537			-63(TCTTTGTTATGCAGAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1505	chr18	81559672	81559872	+	1.03671	NA	Intergenic	Intergenic	432308	NR_039589	100628596		NR_039589	ENSMUSG00000093036	Mir5127	mmu-mir-5127|mu-mir-5127	microRNA 5127	ncRNA	0.000000	0.417910			-67(CTATTGTTATGCAATG,+,0.00)
Oct4_nocontrol_ChIP_peaks_unique-39	chr15	100600041	100600241	+	1.03671	NA	promoter-TSS (NM_001304965)	promoter-TSS (NM_001304965)	-157	NM_001304965	19009	Mm.28825	NM_010127	ENSMUSG00000009739	Pou6f1	2310038G18Rik|C79593|Emb|cns-1	POU domain, class 6, transcription factor 1	protein-coding	0.065000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-2966	chr9	122196573	122196773	+	1.03671	NA	intron (NM_133979, intron 12 of 12)	intron (NM_133979, intron 12 of 12)	77355	NR_106185	102465896		NR_106185	ENSMUSG00000098922	Mir8106	Gm27594|mmu-mir-8106	microRNA 8106	ncRNA	0.015000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-2080	chr4	47353003	47353203	+	1.03671	NA	promoter-TSS (NM_009370)	promoter-TSS (NM_009370)	-119	NM_009370	21812	Mm.197552	NM_009370	ENSMUSG00000007613	Tgfbr1	ALK5|AU017191|Alk-5|ESK2|TGFR-1|TbetaR-I|TbetaRI	transforming growth factor, beta receptor I	protein-coding	0.115000	0.746269			
ePOU_nocontrol_ChIP_peaks_unique-237	chr1	194909157	194909357	+	1.03671	NA	Intergenic	Charlie5|DNA|hAT-Charlie	-29564	NM_133654	12490	Mm.29798	NM_133654	ENSMUSG00000016494	Cd34	AU040960	CD34 antigen	protein-coding	0.000000	0.258706			
ePOU_nocontrol_ChIP_peaks_unique-832	chr13	49205563	49205763	+	1.03671	NA	intron (NM_026738, intron 2 of 5)	MIRb|SINE|MIR	10363	NM_026738	68480	Mm.3336	NM_026738	ENSMUSG00000037960	Card19	1110007C09Rik|AI851695|Bincard	caspase recruitment domain family, member 19	protein-coding	0.035000	0.482587			
ePOU_nocontrol_ChIP_peaks_unique-26	chr1	25779411	25779611	+	1.03671	NA	intron (NM_175642, intron 2 of 30)	intron (NM_175642, intron 2 of 30)	50196	NM_175642	210933	Mm.336569	NM_175642	ENSMUSG00000033569	Adgrb3	A830096D10Rik|Bai3	adhesion G protein-coupled receptor B3	protein-coding	0.000000	0.393035			
ePOU_nocontrol_ChIP_peaks_unique-1558	chr19	26845385	26845585	+	1.03671	NA	Intergenic	Intergenic	-21578	NR_045306	70942	Mm.411548	NR_045306	ENSMUSG00000093772	4931403E22Rik	-	RIKEN cDNA 4931403E22 gene	ncRNA	0.035000	0.532338			
ePOU_nocontrol_ChIP_peaks_unique-2095	chr4	59710677	59710877	+	1.03671	NA	intron (NM_001015681, intron 2 of 3)	intron (NM_001015681, intron 2 of 3)	73078	NM_001013577	66209	Mm.51988	NM_001013577	ENSMUSG00000038544	Inip	1110054O05Rik|2610312O17Rik|AA399876|Ssbip1	INTS3 and NABP interacting protein	protein-coding	0.005000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-617	chr11	116994230	116994430	+	1.03671	NA	Intergenic	Intergenic	75467	NM_172948	268510	Mm.35141	NM_172948	ENSMUSG00000043857	Mgat5b	C330018B01|GnT-IX|mGnTVB	mannoside acetylglucosaminyltransferase 5, isoenzyme B	protein-coding	0.030000	0.532338			-52(ATTTGCAAGGGAAATG,-,0.00)
merged_common-30	chr10	120402212	120402412	+	1.03671	NA	intron (NM_010441, intron 3 of 4)	intron (NM_010441, intron 3 of 4)	12789	NR_040626	320626	Mm.446091	NR_040626	ENSMUSG00000090191	9230105E05Rik	-	RIKEN cDNA 9230105E05 gene	ncRNA	0.020000	0.288557			-16(TCACTTTGATGTTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-211	chr1	181016678	181016878	+	1.03671	NA	intron (NM_001312918, intron 1 of 8)	intron (NM_001312918, intron 1 of 8)	791	NM_010145	13849	Mm.9075	NM_010145	ENSMUSG00000038776	Ephx1	EH|Eph-1|Eph1|Epxh1|mEH	epoxide hydrolase 1, microsomal	protein-coding	0.030000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-179	chr1	163560903	163561103	+	1.03671	NA	Intergenic	Intergenic	-157334	NM_001313738	98376	Mm.32901	NM_178883	ENSMUSG00000040124	Gorab	NTKL-BP1|SCYL1-BP1|Scyl1bp1	golgin, RAB6-interacting	protein-coding	0.010000	0.313433			-95(ATTTAAAAAAAAAAAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2211	chr5	24908520	24908720	+	1.03671	NA	promoter-TSS (NM_001170556)	promoter-TSS (NM_001170556)	-111	NM_001170555	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding	0.140000	0.766169			
ePOU_nocontrol_ChIP_peaks_unique-202	chr1	176970839	176971039	+	1.03671	NA	intron (NM_029756, intron 16 of 17)	intron (NM_029756, intron 16 of 17)	-134806	NR_037996	15365	Mm.441435	NR_037996		Hmga2-ps1	EG666235|Gm7996|Hmgic-ps1|[y]i-c	high mobility group AT-hook 2, pseudogene 1	pseudo	0.005000	0.318408			-79(ATTTACATAAAACAAG,-,0.00),4(TTATTTTGATGCAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2436	chr6	51988179	51988379	+	1.03671	NA	intron (NM_018773, intron 4 of 12)	L1MB7|LINE|L1	24270	NM_018773	54353	Mm.221479	NM_018773	ENSMUSG00000059182	Skap2	2610021A10Rik|AA960083|BB137539|RA70|SKAP-HOM|Saps|Scap2|mSKAP55R	src family associated phosphoprotein 2	protein-coding	0.005000	0.328358			
ePOU_nocontrol_ChIP_peaks_unique-1056	chr15	6707684	6707884	+	1.03671	NA	promoter-TSS (NM_030168)	promoter-TSS (NM_030168)	-597	NM_030168	78757	Mm.275811	NM_030168	ENSMUSG00000050310	Rictor	4921505C17Rik|6030405M08Rik|AVO3|AW492497|D530039E11Rik	RPTOR independent companion of MTOR, complex 2	protein-coding	0.120000	0.651741			
ePOU_nocontrol_ChIP_peaks_unique-2445	chr6	59412688	59412888	+	1.03671	NA	intron (NM_183183, intron 1 of 1)	intron (NM_183183, intron 1 of 1)	13518	NM_183183	243385	Mm.138080	NM_183183	ENSMUSG00000045441	Gprin3	C030038J10Rik|C730021L23	GPRIN family member 3	protein-coding	0.020000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-2129	chr4	100852490	100852690	+	1.03671	NA	intron (NM_198037, intron 1 of 26)	intron (NM_198037, intron 1 of 26)	75911	NM_198037	320508	Mm.151962	NM_198037	ENSMUSG00000028532	Cachd1	1190007F10Rik|AI852726|B430218L07Rik|Vwcd1|mKIAA1573	cache domain containing 1	protein-coding	0.005000	0.402985			
ePOU_nocontrol_ChIP_peaks_unique-1199	chr16	18484954	18485154	+	1.03671	NA	Intergenic	Intergenic	-13659	NM_001285491	13972	Mm.236139	NM_023120	ENSMUSG00000000884	Gnb1l	ESTM55|Gm16314|Me49f07|Wdr14|Wdvcf	guanine nucleotide binding protein (G protein), beta polypeptide 1-like	protein-coding	0.020000	0.457711			56(ACTTTGTTATTCTCAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1721	chr2	84557217	84557417	+	1.03671	NA	Intergenic	Intergenic	-50444	NR_046046	672763	Mm.491046	NR_046046	ENSMUSG00000087362	Gm13710	-	predicted gene 13710	ncRNA	0.025000	0.482587			
merged_common-141	chr2	58554851	58555051	+	1.03671	NA	intron (NM_001110205, intron 1 of 10)	MER44A|DNA|TcMar-Tigger	6459	NM_001355049	11477	Mm.689	NM_007394	ENSMUSG00000026836	Acvr1	ALK2|ActR-I|ActRIA|Acvr|Acvr1a|Acvrlk2|Alk-2|Alk8|D330013D15Rik|SKR1|Tsk7L	activin A receptor, type 1	protein-coding	0.020000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-292	chr10	38554168	38554368	+	1.03671	NA	Intergenic	Intergenic	267511	NM_001177783	215919	Mm.294313	NM_001177783	ENSMUSG00000094311	Rfpl4b	100040915|Gm3037|Gm62	ret finger protein-like 4B	protein-coding	0.015000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-1822	chr2	163685698	163685898	+	1.03671	NA	intron (NM_001039390, intron 2 of 4)	intron (NM_001039390, intron 2 of 4)	-8239	NM_011106	18769	Mm.10091	NM_011106	ENSMUSG00000035268	Pkig	PKIgamma	protein kinase inhibitor, gamma	protein-coding	0.020000	0.442786			80(GATTTGTCATCCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2258	chr5	65626393	65626593	+	1.03671	NA	intron (NM_001081321, intron 26 of 32)	ID_B1|SINE|B4	71743	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|B230308N11Rik|E230024D05Rik	PDS5 cohesin associated factor A	protein-coding	0.000000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-2621	chr7	90882188	90882388	+	1.03671	NA	Intergenic	Intergenic	-208498	NM_011807	23859	Mm.147213	NM_011807	ENSMUSG00000052572	Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|Gm21505|PSD93	discs large MAGUK scaffold protein 2	protein-coding	0.000000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-2595	chr7	65373469	65373669	+	1.03671	NA	Intergenic	Intergenic	-2325	NM_009386	21872	Mm.4342	NM_009386	ENSMUSG00000030516	Tjp1	ZO1	tight junction protein 1	protein-coding	0.035000	0.462687			
merged_common-201	chr5	137533286	137533486	+	1.03671	NA	promoter-TSS (NM_010312)	promoter-TSS (NM_010312)	-80	NM_010312	14693	Mm.30141	NM_010312	ENSMUSG00000029713	Gnb2	Gnb-2	guanine nucleotide binding protein (G protein), beta 2	protein-coding	0.070000	0.557214			
merged_common-155	chr2	173659673	173659873	+	1.03671	NA	promoter-TSS (NR_027957)	promoter-TSS (NR_027957)	-72	NM_024436	19334	Mm.275304	NM_024436	ENSMUSG00000027519	Rab22a	3732413A17Rik|AI662177|AW319644|AW550514|E130120E14Rik|Rab22	RAB22A, member RAS oncogene family	protein-coding	0.090000	0.726368			
ePOU_nocontrol_ChIP_peaks_unique-1811	chr2	154466564	154466764	+	1.03671	NA	intron (NM_001285446, intron 1 of 10)	intron (NM_001285446, intron 1 of 10)	30180	NM_172860	12396	Mm.29914	NM_009823	ENSMUSG00000038533	Cbfa2t2	A430091M07|C330013D05Rik|Cbfa2t2h|MTGR1	CBFA2/RUNX1 translocation partner 2	protein-coding	0.005000	0.368159			
ePOU_nocontrol_ChIP_peaks_unique-289	chr10	33986923	33987123	+	1.03671	NA	TTS (NR_015526)	TTS (NR_015526)	8032	NR_015526	414093	Mm.156915	NR_015526	ENSMUSG00000112280	A830082N09Rik	Gm17567	RIKEN cDNA A830082N09 gene	ncRNA	0.015000	0.388060			37(CTTTGCATGACCAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1729	chr2	98666824	98667024	+	1.03671	NA	Intergenic	GSAT_MM|Satellite|Satellite	1199267	NM_001363049	241568	Mm.241682	NM_178725	ENSMUSG00000050587	Lrrc4c	6430556C10Rik|NGL-1	leucine rich repeat containing 4C	protein-coding	0.040000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-363	chr10	88731125	88731325	+	1.03671	NA	promoter-TSS (NM_025859)	promoter-TSS (NM_025859)	-124	NM_001037166	237433	Mm.478763	NM_001037166		Gm4925	EG237433	predicted gene 4925	protein-coding	0.045000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-692	chr12	55983635	55983835	+	1.03671	NA	Intergenic	Intergenic	147369	NR_155205	52592	Mm.24761	NM_027867	ENSMUSG00000012076	Brms1l	0710008O11Rik|AI159718|BRMS1|D12Ertd407e	breast cancer metastasis-suppressor 1-like	protein-coding	0.020000	0.412935			-26(TATTTGCAATGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1455	chr18	42589573	42589773	+	1.03671	NA	Intergenic	Intergenic	-10021	NM_181543	240239	Mm.186779	NM_181543	ENSMUSG00000042816	Gpr151	C130082O03Rik|GalRL|PGR7|nGPCR-2037	G protein-coupled receptor 151	protein-coding	0.030000	0.512438			
ePOU_nocontrol_ChIP_peaks_unique-2926	chr9	92997953	92998153	+	1.03671	NA	intron (NR_040756, intron 2 of 3)	L1MA6|LINE|L1	7680	NR_040756	78349	Mm.52612	NR_040756	ENSMUSG00000100294	1700034K08Rik	-	RIKEN cDNA 1700034K08 gene	ncRNA	0.005000	0.308458			
ePOU_nocontrol_ChIP_peaks_unique-2068	chr4	34171304	34171504	+	1.03671	NA	Intergenic	Intergenic	-121337	NM_026293	67652	Mm.55848	NM_026293	ENSMUSG00000028264	Spaca1	1700124L11Rik|4930540L03Rik	sperm acrosome associated 1	protein-coding	0.015000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-2677	chr7	138758652	138758852	+	1.03671	NA	Intergenic	L1MC1|LINE|L1	87515	NM_027115	69546	Mm.31598	NM_027115	ENSMUSG00000041775	Mapk1ip1	2310009E07Rik|AU043776|MISS	mitogen-activated protein kinase 1 interacting protein 1	protein-coding	0.010000	0.328358			
ePOU_nocontrol_ChIP_peaks_unique-2947	chr9	110333304	110333504	+	1.03671	NA	promoter-TSS (NM_001001144)	promoter-TSS (NM_001001144)	48	NM_001001144	235623	Mm.288741	NM_001001144	ENSMUSG00000032485	Scap	9530044G19|mKIAA0199	SREBF chaperone	protein-coding	0.145000	0.776119			
ePOU_nocontrol_ChIP_peaks_unique-1698	chr2	65792651	65792851	+	1.03671	NA	Intergenic	RLTR20A3_MM|LTR|ERVK	-53016	NM_153409	77771	Mm.102025	NM_153409	ENSMUSG00000044647	Csrnp3	A330102K23Rik|CSRNP-3|Csnrp3|Mbu1|taip-2	cysteine-serine-rich nuclear protein 3	protein-coding	0.005000	0.348259			
ePOU_nocontrol_ChIP_peaks_unique-496	chr11	60699538	60699738	+	1.03671	NA	promoter-TSS (NM_001159405)	promoter-TSS (NM_001159405)	-52	NM_001159404	16897	Mm.285453	NM_008502	ENSMUSG00000020536	Llgl1	AI325176|Lgl1|Llglh|Mgl1	LLGL1 scribble cell polarity complex component	protein-coding	0.090000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-1857	chr3	25674934	25675134	+	1.03671	NA	intron (NM_001357095, intron 4 of 6)	URR1A|DNA|hAT-Charlie	478952	NM_001357096	192167	Mm.316080	NM_138666	ENSMUSG00000063887	Nlgn1	6330415N05Rik|BB179718|NL1|Nlg1|mKIAA1070	neuroligin 1	protein-coding	0.015000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-899	chr13	109609895	109610095	+	1.03671	NA	intron (NM_011056, intron 3 of 16)	intron (NM_011056, intron 3 of 16)	285251	NR_030644	100124489		NR_030644	ENSMUSG00000076946	Mir582	Mirn582|mir-582|mmu-mir-582	microRNA 582	ncRNA	0.005000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-843	chr13	58128824	58129024	+	1.03671	NA	promoter-TSS (NM_029872)	promoter-TSS (NM_029872)	-368	NM_029872	77134	Mm.490274	NM_029872	ENSMUSG00000007836	Hnrnpa0	1110055B05Rik|3010025E17Rik|Hnrpa0|hnRNP A0	heterogeneous nuclear ribonucleoprotein A0	protein-coding	0.135000	0.726368			
ePOU_nocontrol_ChIP_peaks_unique-2155	chr4	126677396	126677596	+	1.03671	NA	promoter-TSS (NM_011970)	promoter-TSS (NM_011970)	-147	NM_011970	26445	Mm.22233	NM_011970	ENSMUSG00000028837	Psmb2	AU045357|AW108089|C7-I|D4Wsu33e|HC7-I	proteasome (prosome, macropain) subunit, beta type 2	protein-coding	0.055000	0.542289			
ePOU_nocontrol_ChIP_peaks_unique-974	chr14	57908364	57908564	+	1.03671	NA	Intergenic	B1_Mur3|SINE|Alu	-18128	NM_001360097	75965	Mm.29044	NM_029492	ENSMUSG00000021969	Zdhhc20	4930542A17Rik|5033406L14Rik|AI448102|B230110O18Rik|HK11	zinc finger, DHHC domain containing 20	protein-coding	0.010000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-1711	chr2	75691685	75691885	+	1.03671	NA	non-coding (NR_132727, exon 2 of 2)	non-coding (NR_132727, exon 2 of 2)	12878	NR_132727	18024	Mm.1025	NM_010902	ENSMUSG00000015839	Nfe2l2	Nrf2	nuclear factor, erythroid derived 2, like 2	protein-coding	0.005000	0.308458			
ePOU_nocontrol_ChIP_peaks_unique-61	chr1	57970218	57970418	+	1.03671	NA	promoter-TSS (NR_027630)	promoter-TSS (NR_027630)	-234	NM_001159864	51960	Mm.339711	NM_030211	ENSMUSG00000054770	Kctd18	4932411A20Rik|6530404F10Rik	potassium channel tetramerisation domain containing 18	protein-coding	0.015000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-1026	chr14	101646025	101646225	+	1.03671	NA	Intergenic	Intergenic	-5654	NM_001168592	66200	Mm.250474	NM_001033132	ENSMUSG00000075486	Commd6	1110059J08Rik|1700063H17Rik	COMM domain containing 6	protein-coding	0.005000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-101	chr1	88482692	88482892	+	1.03671	NA	Intergenic	Intergenic	27274	NM_008132	14659	Mm.5187	NM_008132	ENSMUSG00000062310	Glrp1	GRP-1	glutamine repeat protein 1	protein-coding	0.035000	0.462687			
merged_common-99	chr15	54256965	54257165	+	1.03671	NA	intron (NM_008764, intron 2 of 4)	intron (NM_008764, intron 2 of 4)	21419	NM_008764	18383	Mm.15383	NM_008764	ENSMUSG00000063727	Tnfrsf11b	OCIF|Opg|TR1	tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	protein-coding	0.005000	0.373134			-51(ATTTGCATATGAAAAT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1005	chr14	74494424	74494624	+	1.03671	NA	Intergenic	Intergenic	138997	NR_046059	74425	Mm.399498	NR_046059	ENSMUSG00000115845	4933402J15Rik	-	RIKEN cDNA 4933402J15 gene	ncRNA	0.005000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-2559	chr7	25237559	25237759	+	1.03671	NA	exon (NM_001031667, exon 1 of 11)	exon (NM_001031667, exon 1 of 11)	192	NM_001031667	606496	Mm.491101	NM_001031667	ENSMUSG00000057177	Gsk3a	2700086H06Rik	glycogen synthase kinase 3 alpha	protein-coding	0.130000	0.815920			
ePOU_nocontrol_ChIP_peaks_unique-838	chr13	54527376	54527576	+	1.03671	NA	intron (NM_176987, intron 2 of 9)	intron (NM_176987, intron 2 of 9)	23671	NM_176987	319719	Mm.376151	NM_176987	ENSMUSG00000043183	Simc1	4732471D19Rik	SUMO-interacting motifs containing 1	protein-coding	0.015000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-278	chr10	25206517	25206717	+	1.03671	NA	intron (NM_018747, intron 7 of 7)	B4A|SINE|B4	-6447	NM_001347460	432442	Mm.485937	NM_018747	ENSMUSG00000039166	Akap7	6430401D08|AI662165|AKAP15|Akap18|BB170514	A kinase (PRKA) anchor protein 7	protein-coding	0.010000	0.492537			13(CCAGTGTTATGTAAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1710	chr2	75658627	75658827	+	1.03671	NA	promoter-TSS (NR_033513)	promoter-TSS (NR_033513)	-532	NM_198090	229279	Mm.316306	NM_053263	ENSMUSG00000059005	Hnrnpa3	2410013L13Rik|2610209F03Rik|2610510D13Rik|Hnrpa3	heterogeneous nuclear ribonucleoprotein A3	protein-coding	0.070000	0.552239			
ePOU_nocontrol_ChIP_peaks_unique-2944	chr9	108710784	108710984	+	1.03671	NA	intron (NM_008924, intron 1 of 10)	intron (NM_008924, intron 1 of 10)	18741	NM_008924	19087	Mm.253102	NM_008924	ENSMUSG00000032601	Prkar2a	1110061A24Rik|AI317181|AI836829|RII(alpha)	protein kinase, cAMP dependent regulatory, type II alpha	protein-coding	0.000000	0.328358			-8(GTTTTGTTTTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2969	chr9	123477741	123477941	+	1.03671	NA	promoter-TSS (NM_013860)	promoter-TSS (NM_013860)	-860	NM_013860	29806	Mm.10987	NM_013860	ENSMUSG00000025239	Limd1	AW822033|D9Ertd192e	LIM domains containing 1	protein-coding	0.000000	0.358209			-23(ATTTGCATAACATTTA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2476	chr6	87259227	87259427	+	1.03671	NA	intron (NM_054041, intron 9 of 17)	L1MB7|LINE|L1	76448	NM_054041	69538	Mm.232525	NM_054041	ENSMUSG00000033420	Antxr1	2310008J16Rik|2810405N18Rik|Antrx1|Tem8	anthrax toxin receptor 1	protein-coding	0.005000	0.457711			
merged_common-113	chr16	75767000	75767200	+	1.03671	NA	promoter-TSS (NM_030201)	promoter-TSS (NM_030201)	-282	NM_030201	110920	Mm.26704	NM_030201	ENSMUSG00000032932	Hspa13	1600002I10Rik|AV006182|B230217N24Rik|Stch	heat shock protein 70 family, member 13	protein-coding	0.040000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-1814	chr2	157760695	157760895	+	1.03671	NA	intron (NM_025680, intron 1 of 15)	Lx8b|LINE|L1	23394	NM_025680	66642	Mm.45193	NM_025680	ENSMUSG00000027649	Ctnnbl1	5730471K09Rik|NAP|NYD-SP19|P14L	catenin, beta like 1	protein-coding	0.005000	0.338308		64(TATGCATTTGTATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2510	chr6	119171690	119171890	+	1.03671	NA	intron (NM_009781, intron 1 of 46)	intron (NM_009781, intron 1 of 46)	-3463	NM_001033379	319618	Mm.250197	NM_001033379	ENSMUSG00000041477	Dcp1b	B930050E02Rik	decapping mRNA 1B	protein-coding	0.010000	0.373134			80(CTTTTATCATGATAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2672	chr7	131362792	131362992	+	1.03671	NA	promoter-TSS (NM_026655)	promoter-TSS (NM_026655)	-166	NR_152380	68277	Mm.121122	NM_026655	ENSMUSG00000040177	2310057M21Rik	3110040E10Rik|AI429544	RIKEN cDNA 2310057M21 gene	protein-coding	0.095000	0.626866			
merged_common-186	chr4	149485112	149485312	+	1.03671	NA	promoter-TSS (NM_001356322)	promoter-TSS (NM_001356322)	-2	NM_133435	66454	Mm.76062	NM_133435	ENSMUSG00000028992	Nmnat1	2610529L11Rik|5730441G13Rik|D4Cole1e|nmnat	nicotinamide nucleotide adenylyltransferase 1	protein-coding	0.085000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-2363	chr5	139736493	139736693	+	1.03671	NA	promoter-TSS (NM_174850)	promoter-TSS (NM_174850)	-260	NM_174850	231830	Mm.240510	NM_174850	ENSMUSG00000036718	Micall2	A930021H16Rik|JRAB|MICAL-L2|mFLJ00139	MICAL-like 2	protein-coding	0.040000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-787	chr13	12395355	12395555	+	1.03671	NA	promoter-TSS (NM_144835)	promoter-TSS (NM_144835)	80	NM_144835	217995	Mm.171186	NM_144835	ENSMUSG00000050244	Heatr1	AA517551|B130016L12Rik|BC019693	HEAT repeat containing 1	protein-coding	0.070000	0.611940			
ePOU_nocontrol_ChIP_peaks_unique-2058	chr4	15111872	15112072	+	1.03671	NA	intron (NM_178617, intron 2 of 12)	intron (NM_178617, intron 2 of 12)	37159	NM_178617	69352	Mm.389031	NM_178617	ENSMUSG00000040536	Necab1	1700003H21Rik|Efcbp1|STIP-1	N-terminal EF-hand calcium binding protein 1	protein-coding	0.005000	0.333333			-12(ATATATATGAGAATTA,-,0.00)
Oct4_nocontrol_ChIP_peaks_unique-73	chr4	150311969	150312169	+	1.03671	NA	intron (NM_001085492, intron 1 of 22)	L2|LINE|L2	30153	NM_001085492	68703	Mm.291274	NM_001085492	ENSMUSG00000039852	Rere	1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye<m03Jus>|eyes3|mKIAA0458	arginine glutamic acid dipeptide (RE) repeats	protein-coding	0.000000	0.422886			-49(ATTTAAAAGACAATAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-40	chr1	37864929	37865129	+	1.03671	NA	promoter-TSS (NM_207228)	promoter-TSS (NM_207228)	53	NM_207228	211484	Mm.332756	NM_207228	ENSMUSG00000060771	Tsga10	4933432N21Rik|AI843383|Gm217|Mtsga10	testis specific 10	protein-coding	0.145000	0.741294			
ePOU_nocontrol_ChIP_peaks_unique-392	chr10	111506226	111506426	+	1.03671	NA	promoter-TSS (NM_009344)	promoter-TSS (NM_009344)	40	NM_009344	21664	Mm.3117	NM_009344	ENSMUSG00000020205	Phlda1	DT1P1B11|TDAG51|Tdag	pleckstrin homology like domain, family A, member 1	protein-coding	0.150000	0.791045			
ePOU_nocontrol_ChIP_peaks_unique-1802	chr2	146092474	146092674	+	1.03671	NA	intron (NM_001369121, intron 18 of 26)	intron (NM_001369121, intron 18 of 26)	-129423	NM_016889	53626	Mm.379070	NM_016889	ENSMUSG00000068154	Insm1	IA-1	insulinoma-associated 1	protein-coding	0.005000	0.368159		24(CATGCATACTCATT,+,0.00)	
merged_common-6	chr1	67496136	67496336	+	1.03671	NA	Intergenic	Intergenic	373209	NM_001080809	227231	Mm.343942	NM_001080809	ENSMUSG00000025991	Cps1	4732433M03Rik|CPS|D1Ucla3	carbamoyl-phosphate synthetase 1	protein-coding	0.010000	0.328358		47(TATGCAAATTTATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-1030	chr14	102859913	102860113	+	1.03671	NA	Intergenic	Intergenic	122619	NR_039592	100628599		NR_039592	ENSMUSG00000092901	Mir5130	mir-5130|mmu-mir-5130|mu-mir-5130	microRNA 5130	ncRNA	0.015000	0.378109			-60(ATTTGCATTTGAATGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2389	chr6	14107185	14107385	+	1.03671	NA	Intergenic	Intergenic	235716	NR_045995	76311	Mm.367129	NR_045995	ENSMUSG00000097616	1110019D14Rik	-	RIKEN cDNA 1110019D14 gene	ncRNA	0.000000	0.318408	-45(AATGAATTATTCATA,+,0.00),-45(AATGAATTATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1764	chr2	125301994	125302194	+	1.03671	NA	intron (NM_007993, intron 65 of 65)	intron (NM_007993, intron 65 of 65)	54579	NM_023595	110074	Mm.282499	NM_023595	ENSMUSG00000027203	Dut	5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase	deoxyuridine triphosphatase	protein-coding	0.000000	0.407960			-81(GTATTCTCATGCTAAA,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2254	chr5	64364696	64364896	+	1.03671	NA	Intergenic	Intergenic	103146	NR_040681	69999	Mm.261413	NR_040681	ENSMUSG00000100911	1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA	0.000000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-2972	chrUn_GL456370	19363	19563	+	1.03671	NA	NA	Intergenic	NA	NA									0.030000	0.169154			-40(TTATTATTATTTTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-680	chr12	41775437	41775637	+	1.03671	NA	intron (NM_053122, intron 6 of 6)	intron (NM_053122, intron 6 of 6)	-289480	NM_001271709	16981	Mm.404786	NM_010733	ENSMUSG00000036295	Lrrn3	NLRR-3	leucine rich repeat protein 3, neuronal	protein-coding	0.000000	0.333333		52(AATGCAAATTCATC,+,0.00),52(AATGCAAATTCATC,-,0.00)	-10(TGTCTGTGATGCTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2036	chr3	154632543	154632743	+	1.03671	NA	Intergenic	Intergenic	35446	NM_001357676	12972	Mm.374855	NM_009968	ENSMUSG00000028199	Cryz	Sez9	crystallin, zeta	protein-coding	0.000000	0.383085			
merged_common-165	chr3	122984297	122984497	+	1.03671	NA	promoter-TSS (NM_133857)	promoter-TSS (NM_133857)	50	NM_133857	99526	Mm.491248	NM_133857	ENSMUSG00000039701	Usp53	AA939927|Phxr3|Sp6|mKIAA1350|mbo	ubiquitin specific peptidase 53	protein-coding	0.115000	0.696517			
merged_common-167	chr3	155997025	155997225	+	1.03671	NA	intron (NR_040553, intron 2 of 4)	intron (NR_040553, intron 2 of 4)	20771	NR_040553	329780	Mm.119000	NR_040553	ENSMUSG00000104553	9330178D15Rik	9330178D15	RIKEN cDNA 9330178D15 gene	ncRNA	0.010000	0.293532			-18(GCATTGTCTTTGAAAG,+,0.00),56(GTTTTCATAACAATAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1343	chr17	30158538	30158738	+	1.03671	NA	intron (NM_001356265, intron 4 of 5)	B3|SINE|B2	153599	NM_148926	21769	Mm.220972	NM_148926	ENSMUSG00000044477	Zfand3	AW539211|TEG-27|Tex27	zinc finger, AN1-type domain 3	protein-coding	0.005000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-2438	chr6	54401613	54401813	+	1.03671	NA	intron (NR_033635, intron 2 of 13)	intron (NR_033635, intron 2 of 13)	-27973	NM_001167860	330319	Mm.434326	NM_001167860	ENSMUSG00000086040	Wipf3	9030621G03|BQ952480	WAS/WASL interacting protein family, member 3	protein-coding	0.005000	0.512438			
ePOU_nocontrol_ChIP_peaks_unique-2331	chr5	120751276	120751476	+	1.03671	NA	Intergenic	Intergenic	-1528	NM_001347448	246728	Mm.260926	NM_145227	ENSMUSG00000032690	Oas2	Oasl11	2'-5' oligoadenylate synthetase 2	protein-coding	0.010000	0.522388			6(TTTAGCAAGGCAAAGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2538	chr6	142345587	142345787	+	1.03671	NA	promoter-TSS (NM_183165)	promoter-TSS (NM_183165)	-10	NM_183165	232491	Mm.490474	NM_183165	ENSMUSG00000041671	Pyroxd1	-	pyridine nucleotide-disulphide oxidoreductase domain 1	protein-coding	0.075000	0.606965			
ePOU_nocontrol_ChIP_peaks_unique-1308	chr17	6729513	6729713	+	1.03671	NA	intron (NM_031395, intron 10 of 14)	intron (NM_031395, intron 10 of 14)	23783	NM_183368	83672	Mm.442201	NM_031395	ENSMUSG00000041831	Sytl3	A430092N21|Slp3|Slp3-a|Slp3-b|mFLJ00307	synaptotagmin-like 3	protein-coding	0.025000	0.497512			
merged_common-234	chr9	57130735	57130935	+	1.03671	NA	promoter-TSS (NM_028636)	promoter-TSS (NM_028636)	58	NM_028636	73744	Mm.30110	NM_028636	ENSMUSG00000032295	Man2c1	1110025H24Rik	mannosidase, alpha, class 2C, member 1	protein-coding	0.095000	0.641791			
ePOU_nocontrol_ChIP_peaks_unique-1881	chr3	49567118	49567318	+	1.03671	NA	Intergenic	Intergenic	190098	NM_130448	73173	Mm.87246	NM_130448	ENSMUSG00000037892	Pcdh18	3110038E07Rik|BB095589|PCDH68L	protocadherin 18	protein-coding	0.010000	0.378109			
Oct4_nocontrol_ChIP_peaks_unique-20	chr11	104442249	104442449	+	1.03671	NA	promoter-TSS (NM_001081045)	promoter-TSS (NM_001081045)	-58	NM_001081045	76719	Mm.136418	NM_001081045	ENSMUSG00000018412	Kansl1	1700081L11Rik|9430041J06Rik|mKIAA1267	KAT8 regulatory NSL complex subunit 1	protein-coding	0.135000	0.761194			
ePOU_nocontrol_ChIP_peaks_unique-742	chr12	87388343	87388543	+	1.03671	NA	promoter-TSS (NM_011479)	promoter-TSS (NM_011479)	-88	NM_011479	20773	Mm.565	NM_011479	ENSMUSG00000021036	Sptlc2	LCB2|LCB2a|Spt2	serine palmitoyltransferase, long chain base subunit 2	protein-coding	0.050000	0.552239			
ePOU_nocontrol_ChIP_peaks_unique-2557	chr7	24884207	24884407	+	1.03671	NA	promoter-TSS (NM_001360116)	promoter-TSS (NM_001360116)	-285	NR_153409	20085	Mm.300281	NM_023133	ENSMUSG00000040952	Rps19	Dsk3	ribosomal protein S19	protein-coding	0.085000	0.601990			
ePOU_nocontrol_ChIP_peaks_unique-498	chr11	61930070	61930270	+	1.03671	NA	promoter-TSS (NM_019921)	promoter-TSS (NM_019921)	87	NM_019921	56697	Mm.274404	NM_019921	ENSMUSG00000047804	Akap10	1500031L16Rik|B130049N18Rik|D-AKAP-2|D-AKAP2|PRKA10	A kinase (PRKA) anchor protein 10	protein-coding	0.105000	0.706468			
ePOU_nocontrol_ChIP_peaks_unique-2067	chr4	33368346	33368546	+	1.03671	NA	intron (NM_001305273, intron 10 of 15)	intron (NM_001305273, intron 10 of 15)	58135	NM_001305273	24018	Mm.240024	NM_011884	ENSMUSG00000028274	Rngtt	AU020997|HCE|MCE1	RNA guanylyltransferase and 5'-phosphatase	protein-coding	0.005000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-1590	chr19	46598866	46599066	+	1.03671	NA	promoter-TSS (NM_001177812)	promoter-TSS (NM_001177812)	-140	NM_146099	226178	Mm.329895	NM_146099	ENSMUSG00000047731	Wbp1l	D19Wsu162e|Opal1	WW domain binding protein 1 like	protein-coding	0.030000	0.572139			
ePOU_nocontrol_ChIP_peaks_unique-1815	chr2	158477580	158477780	+	1.03671	NA	exon (NM_001291138, exon 25 of 30)	exon (NM_001291138, exon 25 of 30)	-24932	NM_145635	246747	Mm.28800	NM_145635	ENSMUSG00000044405	Adig	SMAF-1|Smaf1	adipogenin	protein-coding	0.010000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-610	chr11	110751080	110751280	+	1.03671	NA	Intergenic	L1M2|LINE|L1	-216853	NM_001252207	16517	Mm.30176	NM_010604	ENSMUSG00000051497	Kcnj16	6430410F18Rik|AI132396|Kir5.1	potassium inwardly-rectifying channel, subfamily J, member 16	protein-coding	0.015000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-2429	chr6	48086410	48086610	+	1.03671	NA	promoter-TSS (NM_001347142)	promoter-TSS (NM_001347142)	83	NM_001362062	69228	Mm.207555	NM_001163475	ENSMUSG00000057691	Zfp746	2810407L07Rik|AI317225|Znf746	zinc finger protein 746	protein-coding	0.155000	0.805970			
ePOU_nocontrol_ChIP_peaks_unique-129	chr1	121362447	121362647	+	1.03671	NA	Intergenic	Lx7|LINE|L1	-29958	NM_178082	72999	Mm.27136	NM_133748	ENSMUSG00000003721	Insig2	2900053I11Rik|C730043J18Rik|Insig-2	insulin induced gene 2	protein-coding	0.000000	0.363184			24(ATATATAAGAGAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-930	chr14	20347998	20348198	+	1.03671	NA	promoter-TSS (NM_027475)	promoter-TSS (NM_027475)	23	NM_027475	70601	Mm.35105	NM_027475	ENSMUSG00000021810	Ecd	5730461K03Rik|Hsgt1	ecdysoneless cell cycle regulator	protein-coding	0.075000	0.592040			
ePOU_nocontrol_ChIP_peaks_unique-151	chr1	137927572	137927772	+	1.03671	NA	Intergenic	Intergenic	-38783	NR_029795	735252		NR_029795	ENSMUSG00000065565	Mir181a-1	Mirn181a-1|Mirn213|miR-213|mir-181a-1|mmu-mir-213	microRNA 181a-1	ncRNA	0.005000	0.343284			-78(ATTAAAATCATAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1427	chr18	15899448	15899648	+	1.03671	NA	Intergenic	MER2|DNA|TcMar-Tigger	-139391	NM_001364992	71367	Mm.329304	NM_199055	ENSMUSG00000047161	Chst9	5430438D01Rik|GalNAc4ST-2|galNAc-4-ST2	carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9	protein-coding	0.000000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-735	chr12	84361892	84362092	+	1.03671	NA	promoter-TSS (NM_172581)	promoter-TSS (NM_172581)	24	NM_172582	217707	Mm.280062	NM_172582	ENSMUSG00000021235	Coq6	5930427M12Rik|AW742344	coenzyme Q6 monooxygenase	protein-coding	0.055000	0.537313			
ePOU_nocontrol_ChIP_peaks_unique-2339	chr5	124449716	124449916	+	1.03671	NA	intron (NM_030241, intron 3 of 7)	L1MB7|LINE|L1	3112	NM_001310727	67956	Mm.137966	NM_030241	ENSMUSG00000049327	Kmt5a	2410195B05Rik|AA617402|AW536475|PR-SET7|PR/SET07|Setd8	lysine methyltransferase 5A	protein-coding	0.030000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-2842	chr9	21357291	21357491	+	1.03671	NA	Intergenic	RSINE1|SINE|B4	-10480	NM_001042708	16201	Mm.440026	NM_010561	ENSMUSG00000032178	Ilf3	MBII-26|MPHOSPH4|NF90|NFAR	interleukin enhancer binding factor 3	protein-coding	0.005000	0.462687			
ePOU_nocontrol_ChIP_peaks_unique-2403	chr6	26352380	26352580	+	1.03671	NA	Intergenic	Intergenic	421054	NR_040771	626904	Mm.126787	NR_040771	ENSMUSG00000106799	Gm20756	-	predicted gene, 20756	ncRNA	0.000000	0.318408			16(ATTTGCTTAACAATTA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-208	chr1	179803408	179803608	+	1.03671	NA	5' UTR (NM_026375, exon 1 of 36)	5' UTR (NM_026375, exon 1 of 36)	507	NM_026375	226747	Mm.128165	NM_026375	ENSMUSG00000026491	Ahctf1	6230412P20Rik|AV011447|Elys	AT hook containing transcription factor 1	protein-coding	0.155000	0.751244			
ePOU_nocontrol_ChIP_peaks_unique-1113	chr15	58871476	58871676	+	1.03671	NA	Intergenic	Intergenic	-1073	NM_026642	68260	Mm.278805	NM_026642	ENSMUSG00000037085	Trmt12	4632406N01Rik|AI449275|Tyw2	tRNA methyltranferase 12	protein-coding	0.000000	0.383085			51(ATTTGCATAAAAGTCT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1515	chr19	4163302	4163502	+	1.03671	NA	promoter-TSS (NR_153661)	promoter-TSS (NR_153661)	-19	NM_021485	58988	Mm.271937	NM_021485	ENSMUSG00000024830	Rps6kb2	S6K-beta-2|S6K2	ribosomal protein S6 kinase, polypeptide 2	protein-coding	0.060000	0.542289			
ePOU_nocontrol_ChIP_peaks_unique-893	chr13	104530556	104530756	+	1.03671	NA	Intergenic	Lx9|LINE|L1	242821	NM_001081020	108154	Mm.208125	NM_175496	ENSMUSG00000046169	Adamts6	A930019D11Rik|ADAM-TS6|b2b1879.1Clo|b2b2029Clo|b2b2182Clo|b2b2187.1Clo|b2b2228Clo	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	protein-coding	0.000000	0.308458			
merged_common-160	chr3	51939754	51939954	+	1.03671	NA	intron (NM_001004176, intron 1 of 4)	intron (NM_001004176, intron 1 of 4)	165152	NM_001004176	433586	Mm.234972	NM_001004176	ENSMUSG00000061143	Maml3	AV234550|BC049812|Mam-2|mKIAA1816	mastermind like transcriptional coactivator 3	protein-coding	0.020000	0.353234	-65(TTTCAATAATTCATA,+,0.00)		54(AGATTTTTATGTTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-572	chr11	96720053	96720253	+	1.03671	NA	intron (NM_001177898, intron 9 of 10)	intron (NM_001177898, intron 9 of 10)	57402	NM_028965	74479	Mm.270781	NM_028965	ENSMUSG00000020876	Snx11	4933439F10Rik|A930041K09Rik|AI117694	sorting nexin 11	protein-coding	0.000000	0.303483	-46(ACTGAATAATGCACA,+,0.00)		
merged_common-171	chr4	43025663	43025863	+	1.03671	NA	promoter-TSS (NM_001305387)	promoter-TSS (NM_001305387)	11	NM_020035	56703	Mm.143738	NM_020035	ENSMUSG00000028454	Pigo	PIG-O	phosphatidylinositol glycan anchor biosynthesis, class O	protein-coding	0.045000	0.631841			
ePOU_nocontrol_ChIP_peaks_unique-135	chr1	128244169	128244369	+	1.03671	NA	5' UTR (NM_001356529, exon 1 of 13)	5' UTR (NM_001356529, exon 1 of 13)	132	NM_001356529	67812	Mm.293321	NM_026390	ENSMUSG00000026353	Ubxn4	1300013G12Rik|Ubxd2|mKIAA0242	UBX domain protein 4	protein-coding	0.135000	0.706468			
ePOU_nocontrol_ChIP_peaks_unique-2961	chr9	120709338	120709538	+	1.03671	NA	Intergenic	Intergenic	132107	NR_073359	76100	Mm.48212	NR_073359	ENSMUSG00000052658	5830454E08Rik	-	RIKEN cDNA 5830454E08 gene	ncRNA	0.015000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-1442	chr18	30897291	30897491	+	1.03671	NA	Intergenic	Intergenic	419737	NM_009065	19762	Mm.5163	NM_009065	ENSMUSG00000057455	Rit2	RIBA|Rin|Roc2	Ras-like without CAAX 2	protein-coding	0.010000	0.422886			
merged_common-110	chr16	43323053	43323253	+	1.03671	NA	intron (NM_181058, intron 2 of 6)	intron (NM_181058, intron 2 of 6)	75869	NM_019778	56490	Mm.136238	NM_019778	ENSMUSG00000022708	Zbtb20	1300017A20Rik|7330412A13Rik|A930017C21Rik|D16Wsu73e|DPZF|HOF|J20|ODA-8S|Oda8|Tg(PDGFB-APPSwInd)20Lms|Zfp288	zinc finger and BTB domain containing 20	protein-coding	0.005000	0.363184			14(CCTCTGTCATTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2055	chr4	14863913	14864113	+	1.03671	NA	promoter-TSS (NM_028264)	promoter-TSS (NM_028264)	-206	NM_028264	72519	Mm.279158	NM_028264	ENSMUSG00000028221	Pip4p2	2610319K07Rik|AI315591|AV001360|Tmem55a	phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2	protein-coding	0.015000	0.552239			
ePOU_nocontrol_ChIP_peaks_unique-53	chr1	52734424	52734624	+	1.03671	NA	Intergenic	Intergenic	-7166	NM_001357464	98682	Mm.491173	NM_133829	ENSMUSG00000041439	Mfsd6	2210010L05Rik|9630025I22Rik|AI836200|AW212394|MMR2	major facilitator superfamily domain containing 6	protein-coding	0.005000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-192	chr1	171440615	171440815	+	1.03671	NA	intron (NM_172647, intron 1 of 9)	intron (NM_172647, intron 1 of 9)	3154	NM_172647	16456	Mm.294882	NM_172647	ENSMUSG00000038235	F11r	9130004G24|AA638916|ESTM33|JAM|JAM-1|JAM-A|Jcam|Jcam1|Ly106	F11 receptor	protein-coding	0.010000	0.467662			70(AGTTTCTTATGTATAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1704	chr2	71340057	71340257	+	1.03671	NA	intron (NM_172436, intron 3 of 17)	intron (NM_172436, intron 3 of 17)	27598	NM_172436	78830	Mm.30928	NM_172436	ENSMUSG00000027010	Slc25a12	2610002D09Rik|AI839531|B230107K20Rik|BB129864	solute carrier family 25 (mitochondrial carrier, Aralar), member 12	protein-coding	0.005000	0.338308			-26(GATTGCATGATAATAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1353	chr17	36257172	36257372	+	1.03671	NA	intron (NM_026308, intron 3 of 4)	intron (NM_026308, intron 3 of 4)	574	NM_026308	67676	Mm.27131	NM_026308	ENSMUSG00000024446	Rpp21	0610037N01Rik	ribonuclease P 21 subunit	protein-coding	0.015000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-3004	chrX	166806231	166806431	+	1.03671	NA	Intergenic	Intergenic	144306	NR_046015	382255	Mm.336320	NR_046015	ENSMUSG00000086860	Gm1720	-	predicted gene 1720	ncRNA	0.000000	0.323383			
ePOU_nocontrol_ChIP_peaks_unique-251	chr10	10384353	10384553	+	1.03671	NA	intron (NM_001127353, intron 26 of 36)	intron (NM_001127353, intron 26 of 36)	87946	NM_001127353	215772	Mm.246573	NM_172547	ENSMUSG00000050994	Adgb	9130014G24Rik	androglobin	protein-coding	0.000000	0.368159			-19(ATTTGCAACACAAATT,-,0.00),1(ATTAGCAAAATAATAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1441	chr18	30519320	30519520	+	1.03671	NA	Intergenic	RLTR25A|LTR|ERVK	246555	NR_151699	225326	Mm.194127	NM_181414	ENSMUSG00000033628	Pik3c3	5330434F23Rik|Vps34	phosphatidylinositol 3-kinase catalytic subunit type 3	protein-coding	0.000000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-1144	chr15	83149216	83149416	+	1.03671	NA	promoter-TSS (NM_001347082)	promoter-TSS (NM_001347082)	62	NM_001347082	73826	Mm.23758	NM_178627	ENSMUSG00000041815	Poldip3	1110008P04Rik|AA408269|AL022852|C77954|PDIP46|SKAR|mKIAA1649	polymerase (DNA-directed), delta interacting protein 3	protein-coding	0.135000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-578	chr11	98438855	98439055	+	1.03671	NA	promoter-TSS (NM_025559)	promoter-TSS (NM_025559)	33	NM_025559	103742	Mm.259614	NM_025559	ENSMUSG00000002580	Mien1	1810046J19Rik|AI463380|Rdx12	migration and invasion enhancer 1	protein-coding	0.095000	0.691542			
ePOU_nocontrol_ChIP_peaks_unique-80	chr1	69884262	69884462	+	1.03671	NA	intron (NM_001271533, intron 7 of 10)	intron (NM_001271533, intron 7 of 10)	57392	NM_029160	66722	Mm.440554	NM_025728	ENSMUSG00000053153	Spag16	4921511D23Rik|4930524F24Rik|4930585K05Rik|AV261009|Pf20|Wdr29	sperm associated antigen 16	protein-coding	0.000000	0.313433			
ePOU_nocontrol_ChIP_peaks_unique-2007	chr3	131900967	131901167	+	1.03671	NA	Intergenic	Intergenic	-184225	NM_020265	56811	Mm.103593	NM_020265	ENSMUSG00000028031	Dkk2	-	dickkopf WNT signaling pathway inhibitor 2	protein-coding	0.020000	0.353234		-18(TATGCATCTTCATG,-,0.00)	79(CCATTGTTATGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1973	chr3	104288102	104288302	+	1.03671	NA	Intergenic	Intergenic	-67796	NM_001159354	99470	Mm.264849	NM_133853	ENSMUSG00000052539	Magi3	4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634	membrane associated guanylate kinase, WW and PDZ domain containing 3	protein-coding	0.000000	0.417910			-37(AATTTGCAATGCAAAT,+,0.00),-36(ATTTGCAATGCAAATA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2309	chr5	107148262	107148462	+	1.03671	NA	intron (NM_011578, intron 6 of 16)	intron (NM_011578, intron 6 of 16)	141267	NM_011578	21814	Mm.200775	NM_011578	ENSMUSG00000029287	Tgfbr3	1110036H20Rik|AU015626|AW215636|TBRIII	transforming growth factor, beta receptor III	protein-coding	0.020000	0.472637			-25(GTTTACATAACAATAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1656	chr2	31974323	31974523	+	1.03671	NA	promoter-TSS (NM_172268)	promoter-TSS (NM_172268)	-27	NM_172268	227720	Mm.289686	NM_172268	ENSMUSG00000001855	Nup214	BC039282|CAN|D2H9S46E	nucleoporin 214	protein-coding	0.115000	0.661692			
ePOU_nocontrol_ChIP_peaks_unique-1793	chr2	137598126	137598326	+	1.03671	NA	Intergenic	Intergenic	-481706	NM_013822	16449	Mm.22398	NM_013822	ENSMUSG00000027276	Jag1	ABE2|Gsfabe2|Htu|Ozz|Ser-1	jagged 1	protein-coding	0.015000	0.402985			
merged_common-159	chr3	36312348	36312548	+	1.03671	NA	Intergenic	Intergenic	-90173	NM_198192	229214	Mm.330975	NM_198192	ENSMUSG00000058400	Qrfpr	AQ27|Gpr103|SP9155	pyroglutamylated RFamide peptide receptor	protein-coding	0.000000	0.328358			
ePOU_nocontrol_ChIP_peaks_unique-2052	chr4	11704311	11704511	+	1.03671	NA	promoter-TSS (NM_010276)	promoter-TSS (NM_010276)	-36	NM_010276	14579	Mm.247486	NM_010276	ENSMUSG00000028214	Gem	AV020497	GTP binding protein (gene overexpressed in skeletal muscle)	protein-coding	0.115000	0.681592			
ePOU_nocontrol_ChIP_peaks_unique-1690	chr2	60209773	60209973	+	1.03671	NA	promoter-TSS (NM_020575)	promoter-TSS (NM_020575)	-63	NM_020575	57438	Mm.260635	NM_020575	ENSMUSG00000026977	March7	Axo|Axot|Gtrgeo17	membrane-associated ring finger (C3HC4) 7	protein-coding	0.175000	0.810945			
ePOU_nocontrol_ChIP_peaks_unique-2350	chr5	135394570	135394770	+	1.03671	NA	promoter-TSS (NM_148932)	promoter-TSS (NM_148932)	-124	NM_148932	107939	Mm.28399	NM_148932	ENSMUSG00000053293	Pom121	2610027A18Rik|C80273|mKIAA0618	nuclear pore membrane protein 121	protein-coding	0.115000	0.621891			
ePOU_nocontrol_ChIP_peaks_unique-543	chr11	83362948	83363148	+	1.03671	NA	intron (NM_027915, intron 14 of 20)	intron (NM_027915, intron 14 of 20)	-46089	NM_001361566	276952	Mm.66275	NM_001013386	ENSMUSG00000020684	Rasl10b	B230331P10Rik|Gm729|VTS58635	RAS-like, family 10, member B	protein-coding	0.020000	0.407960			
Oct4_nocontrol_ChIP_peaks_unique-72	chr4	141546432	141546632	+	1.03671	NA	non-coding (NR_030695, exon 1 of 1)	non-coding (NR_030695, exon 1 of 1)	370	NR_030695	320456	Mm.32859	NM_177163		B330016D10Rik	-	RIKEN cDNA B330016D10 gene	ncRNA	0.125000	0.736318			
ePOU_nocontrol_ChIP_peaks_unique-2680	chr7	142284703	142284903	+	1.03671	NA	Intergenic	ERVB4_1-I_MM-int|LTR|ERVK	-10440	NM_001199309	100043627	Mm.388589	NM_001199309	ENSMUSG00000056885	Gm4559	-	predicted gene 4559	protein-coding	0.055000	0.492537			-27(TTTCTCTCATGGAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-19	chr1	21757023	21757223	+	1.03671	NA	intron (NM_001160139, intron 1 of 14)	intron (NM_001160139, intron 1 of 14)	204819	NM_023872	226922	Mm.336519	NM_023872	ENSMUSG00000028033	Kcnq5	7730402H11|9230107O05Rik|AA589396|D1Mgi1	potassium voltage-gated channel, subfamily Q, member 5	protein-coding	0.005000	0.308458			-27(TCTTTCAAATGTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1177	chr16	4077681	4077881	+	1.03671	NA	promoter-TSS (NM_026508)	promoter-TSS (NM_026508)	29	NR_152409	68015	Mm.123366	NM_026508	ENSMUSG00000005981	Trap1	2410002K23Rik|HSP75	TNF receptor-associated protein 1	protein-coding	0.100000	0.681592			
ePOU_nocontrol_ChIP_peaks_unique-1952	chr3	89177276	89177476	+	1.03671	NA	promoter-TSS (NM_011886)	promoter-TSS (NM_011886)	-15	NM_001309909	24045	Mm.257052	NM_011886	ENSMUSG00000028049	Scamp3	Sc3	secretory carrier membrane protein 3	protein-coding	0.055000	0.557214			
ePOU_nocontrol_ChIP_peaks_unique-603	chr11	109425843	109426043	+	1.03671	NA	promoter-TSS (NM_001252193)	promoter-TSS (NM_001252193)	-3	NM_025275	13929	Mm.211850	NM_025275	ENSMUSG00000020610	Amz2	AA408420|ESTM12|X83328	archaelysin family metallopeptidase 2	protein-coding	0.090000	0.671642			
ePOU_nocontrol_ChIP_peaks_unique-2355	chr5	136360635	136360835	+	1.03671	NA	intron (NM_001291233, intron 7 of 23)	intron (NM_001291233, intron 7 of 23)	15068	NR_030500	723975		NR_030500	ENSMUSG00000106479	Mir721	Mirn721|miRY|mir-721|mmu-mir-721	microRNA 721	ncRNA	0.000000	0.407960			
ePOU_nocontrol_ChIP_peaks_unique-1333	chr17	27238680	27238880	+	1.03671	NA	intron (NR_131118, intron 2 of 2)	intron (NR_131118, intron 2 of 2)	9286	NR_131118	319720	Mm.394996	NR_131118	ENSMUSG00000117916	9630028I04Rik	-	RIKEN cDNA 9630028I04 gene	ncRNA	0.035000	0.552239	-20(TTTGCATTATGCACA,+,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2290	chr5	91702395	91702595	+	1.03671	NA	Intergenic	Intergenic	64805	NR_045383	73452	Mm.396233	NR_045383	ENSMUSG00000101978	1700063O14Rik	-	RIKEN cDNA 1700063O14 gene	ncRNA	0.000000	0.268657			
ePOU_nocontrol_ChIP_peaks_unique-485	chr11	53520954	53521154	+	1.03671	NA	intron (NM_001361969, intron 1 of 9)	intron (NM_001361969, intron 1 of 9)	866	NM_001361969	20362	Mm.274399	NM_033144	ENSMUSG00000018398	Sept8	AW046166|Sepl	septin 8	protein-coding	0.005000	0.363184			-9(ATATGCATAACAAAGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-943	chr14	29604018	29604218	+	1.03671	NA	intron (NM_009785, intron 2 of 37)	intron (NM_009785, intron 2 of 37)	117746	NM_009785	12294	Mm.386754	NM_009785	ENSMUSG00000021991	Cacna2d3	Cacnad3|alapha2delta3	calcium channel, voltage-dependent, alpha2/delta subunit 3	protein-coding	0.010000	0.393035			19(ATATGAATAAAAAAAT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1395	chr17	81064935	81065135	+	1.03671	NA	promoter-TSS (NM_028138)	promoter-TSS (NM_028138)	50	NM_028138	72167	Mm.273257	NM_028138	ENSMUSG00000024246	Thumpd2	2810025A12Rik	THUMP domain containing 2	protein-coding	0.135000	0.731343			
ePOU_nocontrol_ChIP_peaks_unique-917	chr13	118789718	118789918	+	1.03671	NA	3' UTR (NM_008002, exon 3 of 3)	3' UTR (NM_008002, exon 3 of 3)	75119	NM_008002	14165	Mm.317323	NM_008002	ENSMUSG00000021732	Fgf10	AEY17|BB213776|Fgf-10|Gsfaey17	fibroblast growth factor 10	protein-coding	0.005000	0.373134			
ePOU_nocontrol_ChIP_peaks_unique-2825	chr9	4309626	4309826	+	1.03671	NA	promoter-TSS (NM_001326359)	promoter-TSS (NM_001326359)	-17	NM_001164574	69149	Mm.25946	NM_026962	ENSMUSG00000025893	Kbtbd3	2200003A07Rik|Bklhd3	kelch repeat and BTB (POZ) domain containing 3	protein-coding	0.085000	0.621891			
ePOU_nocontrol_ChIP_peaks_unique-128	chr1	121249174	121249374	+	1.03671	NA	Intergenic	B3|SINE|B2	78404	NM_001271531	72999	Mm.27136	NM_133748	ENSMUSG00000003721	Insig2	2900053I11Rik|C730043J18Rik|Insig-2	insulin induced gene 2	protein-coding	0.000000	0.348259			-70(TTATTTTTATGTATAT,+,0.00)
merged_common-100	chr15	77956246	77956446	+	1.03671	NA	intron (NM_001017983, intron 1 of 8)	CpG	376	NM_001168260	239554	Mm.295605	NM_001017983	ENSMUSG00000016552	Foxred2	A430097D04Rik|D15Bwg0759e|Gm304	FAD-dependent oxidoreductase domain containing 2	protein-coding	0.000000	0.502488			-9(TTATTGTCATGGTAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-451	chr11	33528118	33528318	+	1.03671	NA	Intergenic	RLTR13B3|LTR|ERVK	-14465	NM_023146	66011	Mm.383775	NM_023146	ENSMUSG00000040594	Ranbp17	-	RAN binding protein 17	protein-coding	0.010000	0.398010			
ePOU_nocontrol_ChIP_peaks_unique-924	chr14	14633063	14633263	+	1.03671	NA	Intergenic	Intergenic	-69862	NM_001360511	218756	Mm.258893	NM_001033270	ENSMUSG00000021733	Slc4a7	E430014N10Rik|NBC3|NBCn1|NBCn1-G|Tg(Thy1-SNCA)12Mjff	solute carrier family 4, sodium bicarbonate cotransporter, member 7	protein-coding	0.030000	0.472637			-94(ATTAAAATCACAATTA,-,0.00)
Oct4_nocontrol_ChIP_peaks_unique-7	chr1	163510000	163510200	+	1.03671	NA	Intergenic	RMER12|LTR|ERVK	-106431	NM_001313738	98376	Mm.32901	NM_178883	ENSMUSG00000040124	Gorab	NTKL-BP1|SCYL1-BP1|Scyl1bp1	golgin, RAB6-interacting	protein-coding	0.000000	0.343284		87(TATGCATAAACATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2037	chr3	155034563	155034763	+	1.03671	NA	intron (NM_177066, intron 4 of 24)	intron (NM_177066, intron 4 of 24)	20744	NM_177066	435766	Mm.210428	NM_177066	ENSMUSG00000040086	Tnni3k	Cark|D830019J24Rik	TNNI3 interacting kinase	protein-coding	0.010000	0.323383		-38(TTTGCATATGGATG,+,0.00),-38(TTTGCATATGGATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-639	chr12	4557058	4557258	+	1.03671	NA	Intergenic	MLTR25A|LTR|ERVK	33045	NR_136891	102634330	Mm.402324	NR_136891	ENSMUSG00000112422	Gm31938	-	predicted gene, 31938	ncRNA	0.015000	0.432836			
ePOU_nocontrol_ChIP_peaks_unique-2731	chr8	56129512	56129712	+	1.03671	NA	3' UTR (NM_080438, exon 10 of 10)	3' UTR (NM_080438, exon 10 of 10)	-164940	NM_008278	15446	Mm.18832	NM_008278	ENSMUSG00000031613	Hpgd	15-PGDH|AV026552	hydroxyprostaglandin dehydrogenase 15 (NAD)	protein-coding	0.005000	0.323383	-32(TATGAATTATGCAGA,+,0.00),-32(TATGAATTATGCAGA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1020	chr14	87315186	87315386	+	1.03671	NA	Intergenic	Intergenic	-101297	NM_172605	219249	Mm.35168	NM_172605	ENSMUSG00000022019	Tdrd3	4732418C03Rik|6720468N18	tudor domain containing 3	protein-coding	0.010000	0.388060			-51(CTGTGCATAACAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2584	chr7	46033606	46033806	+	1.03671	NA	promoter-TSS (NM_153057)	promoter-TSS (NM_153057)	10	NM_153057	211548	Mm.274811	NM_153057	ENSMUSG00000030835	Nomo1	D7Ertd156e|Nomo|pM5	nodal modulator 1	protein-coding	0.135000	0.741294			
ePOU_nocontrol_ChIP_peaks_unique-1246	chr16	46257240	46257440	+	1.03671	NA	Intergenic	Intergenic	-102263	NM_001304528	11615	Mm.330692	NM_001304528	ENSMUSG00000048087	Gm4737	AL024110|EG11615	predicted gene 4737	protein-coding	0.005000	0.328358			
ePOU_nocontrol_ChIP_peaks_unique-702	chr12	72882596	72882796	+	1.03671	NA	intron (NM_029444, intron 17 of 17)	intron (NM_029444, intron 17 of 17)	35069	NM_029444	75801	Mm.242892	NM_029444	ENSMUSG00000021098	4930447C04Rik	4921504I02Rik|A930035O15Rik|Six6OS|Six6as|Six6os1	RIKEN cDNA 4930447C04 gene	protein-coding	0.000000	0.248756	-15(TATGAATTATTCATA,+,0.00),-15(TATGAATTATTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-1844	chr3	7424541	7424741	+	1.03671	NA	intron (NM_008862, intron 1 of 2)	intron (NM_008862, intron 1 of 2)	58037	NM_008862	18767	Mm.3193	NM_008862	ENSMUSG00000027499	Pkia	AI415001|PKIalpha	protein kinase inhibitor, alpha	protein-coding	0.005000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-2313	chr5	107687999	107688199	+	1.03671	NA	Intergenic	CpG	15381	NR_045871	654809	Mm.399159	NR_045871	ENSMUSG00000106333	4930428O21Rik	-	RIKEN cDNA 4930428O21 gene	ncRNA	0.085000	0.656716			
ePOU_nocontrol_ChIP_peaks_unique-1593	chr19	47731017	47731217	+	1.03671	NA	promoter-TSS (NM_026377)	promoter-TSS (NM_026377)	-639	NM_026377	67788	Mm.181610	NM_026377	ENSMUSG00000025066	Sfr1	6330577E15Rik|Meir5	SWI5 dependent recombination repair 1	protein-coding	0.045000	0.487562			
ePOU_nocontrol_ChIP_peaks_unique-2134	chr4	104837428	104837628	+	1.03671	NA	intron (NM_146148, intron 7 of 10)	intron (NM_146148, intron 7 of 10)	38870	NM_001290645	230558	Mm.197638	NM_146148	ENSMUSG00000035031	C8a	-	complement component 8, alpha polypeptide	protein-coding	0.005000	0.368159			
merged_common-79	chr13	83016843	83017043	+	1.03671	NA	Intergenic	Intergenic	-318610	NR_039537	100628621		NR_039537	ENSMUSG00000106655	Mir3961	mmu-mir-3961	microRNA 3961	ncRNA	0.000000	0.432836			72(ATTTGCAAGTGAAAAA,-,0.00)
Oct4_nocontrol_ChIP_peaks_unique-96	chr8	14072587	14072787	+	1.03671	NA	intron (NM_001034862, intron 2 of 5)	intron (NM_001034862, intron 2 of 5)	17640	NM_001034862	234086	Mm.268896	NM_001034862	ENSMUSG00000051978	Erich1	-	glutamate rich 1	protein-coding	0.005000	0.567164			
ePOU_nocontrol_ChIP_peaks_unique-16	chr1	20682332	20682532	+	1.03671	NA	promoter-TSS (NR_029902)	promoter-TSS (NR_029902)	-337	NR_029902	723817		NR_029902	ENSMUSG00000065480	Mir133b	Mirn133b|mir-133b	microRNA 133b	ncRNA	0.000000	0.263682		9(TTTACATATGCATA,+,0.00)	-40(CATTTTTAATGCAAAC,+,0.00),26(ATATACTTGACAATGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-210	chr1	180384238	180384438	+	1.03671	NA	intron (NM_001081175, intron 2 of 7)	intron (NM_001081175, intron 2 of 7)	-53789	NR_003623	277333	Mm.389223	NM_199472		Gm5069	EG277333	glyceraldehyde-3-phosphate dehydrogenase pseudogene	pseudo	0.015000	0.427861		-25(TATGCATATGCAAA,+,0.00),-25(TATGCATATGCAAA,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2383	chr6	4446092	4446292	+	1.03671	NA	Intergenic	Intergenic	-59426	NM_007743	12843	Mm.277792	NM_007743	ENSMUSG00000029661	Col1a2	AA960264|AI325291|Col1a-2|Cola-2|Cola2|oim	collagen, type I, alpha 2	protein-coding	0.005000	0.427861			
ePOU_nocontrol_ChIP_peaks_unique-538	chr11	80413482	80413682	+	1.03671	NA	Intergenic	Intergenic	-15033	NM_178616	69077	Mm.260539	NM_178616	ENSMUSG00000017428	Psmd11	1700089D09Rik|1810019E17Rik|2610024G20Rik|2810055C24Rik|C78232|P44.5|S9	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	protein-coding	0.010000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-1850	chr3	18623957	18624157	+	1.03671	NA	Intergenic	Intergenic	-143580	NR_040544	73959	Mm.60616	NR_040544	ENSMUSG00000102699	4930433B08Rik	-	RIKEN cDNA 4930433B08 gene	ncRNA	0.010000	0.522388			
ePOU_nocontrol_ChIP_peaks_unique-1379	chr17	67412512	67412712	+	1.03671	NA	Intergenic	Intergenic	-58121	NM_001357625	19274	Mm.311809	NM_008984	ENSMUSG00000033278	Ptprm	RPTPmu|mKIAA4044	protein tyrosine phosphatase, receptor type, M	protein-coding	0.015000	0.368159		-43(GCTGCATATTCATG,+,0.00),-43(GCTGCATATTCATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-679	chr12	41053152	41053352	+	1.03671	NA	intron (NM_053122, intron 2 of 6)	intron (NM_053122, intron 2 of 6)	29162	NM_053122	93757	Mm.363813	NM_053122	ENSMUSG00000056899	Immp2l	AI853880|IMP2|Tg(HLA-A/H2-D)2Enge	IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)	protein-coding	0.005000	0.358209			-90(CCATTTTCATTCAGAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-439	chr11	22837577	22837777	+	1.03671	NA	intron (NM_001169114, intron 1 of 1)	intron (NM_001169114, intron 1 of 1)	22058	NM_016888	53625	Mm.395495	NM_016888	ENSMUSG00000051650	B3gnt2	AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2	protein-coding	0.005000	0.283582			
ePOU_nocontrol_ChIP_peaks_unique-2594	chr7	64392345	64392545	+	1.03671	NA	promoter-TSS (NM_026483)	promoter-TSS (NM_026483)	-177	NM_028626	73724	Mm.10093	NM_028626	ENSMUSG00000033429	Mcee	1110007A04Rik	methylmalonyl CoA epimerase	protein-coding	0.060000	0.497512			
ePOU_nocontrol_ChIP_peaks_unique-1577	chr19	38395855	38396055	+	1.03671	NA	promoter-TSS (NM_175507)	promoter-TSS (NM_175507)	-25	NM_175507	240660	Mm.262085	NM_175507	ENSMUSG00000044026	Slc35g1	AA590464|D330039I19Rik|Tmem20	solute carrier family 35, member G1	protein-coding	0.145000	0.781095			
ePOU_nocontrol_ChIP_peaks_unique-2457	chr6	71543876	71544076	+	1.03671	NA	promoter-TSS (NM_001355675)	promoter-TSS (NM_001355675)	124	NM_001361405	66700	Mm.181278	NM_025783	ENSMUSG00000053119	Chmp3	25.1|4921505F14Rik|9130011K15Rik|CGI-49|D6Ertd286e|NEDF|Vps24	charged multivesicular body protein 3	protein-coding	0.055000	0.626866			
ePOU_nocontrol_ChIP_peaks_unique-281	chr10	27382879	27383079	+	1.03671	NA	intron (NM_008481, intron 4 of 63)	intron (NM_008481, intron 4 of 63)	-6887	NR_131034	75855	Mm.402080	NR_131034	ENSMUSG00000101636	4930579H20Rik	-	RIKEN cDNA 4930579H20 gene	ncRNA	0.005000	0.407960			
merged_common-187	chr4_JH584295_random	1361	1561	+	1.03671	NA	NA	CpG	NA	NA									0.075000	0.572139		40(CATAAATATGCAAA,+,0.00),40(CATAAATATGCAAA,-,0.00)	
Oct4_nocontrol_ChIP_peaks_unique-95	chr8	13208830	13209030	+	1.03671	NA	Intergenic	Intergenic	-8306	NM_001368858	66790	Mm.34901	NM_025768	ENSMUSG00000038515	Grtp1	5430401C05Rik|C81211|Tbc1d6	GH regulated TBC protein 1	protein-coding	0.000000	0.457711			
ePOU_nocontrol_ChIP_peaks_unique-2229	chr5	34513838	34514038	+	1.03671	NA	promoter-TSS (NM_139064)	promoter-TSS (NM_139064)	41	NM_139064	231130	Mm.28615	NM_139064	ENSMUSG00000059866	Tnip2	1810020H16Rik|ABIN-2|AI428870	TNFAIP3 interacting protein 2	protein-coding	0.090000	0.686567			
ePOU_nocontrol_ChIP_peaks_unique-2942	chr9	107523691	107523891	+	1.03671	NA	intron (NM_001174050, intron 23 of 37)	intron (NM_001174050, intron 23 of 37)	-10154	NM_019704	56395	Mm.260153	NM_019704	ENSMUSG00000010045	Tmem115	C78915|Pl6|Pp6	transmembrane protein 115	protein-coding	0.005000	0.547264			
ePOU_nocontrol_ChIP_peaks_unique-1075	chr15	25676602	25676802	+	1.03671	NA	intron (NM_019472, intron 2 of 40)	MER58B|DNA|hAT-Charlie	54152	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799|myosin-X	myosin X	protein-coding	0.015000	0.447761			72(TTAATGTCATGCAATT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-737	chr12	85110783	85110983	+	1.03671	NA	promoter-TSS (NM_030225)	promoter-TSS (NM_030225)	50	NM_030225	78920	Mm.296221	NM_030225	ENSMUSG00000004789	Dlst	1600017E01Rik|4632413C10Rik|4930529O08Rik|DLTS	dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	protein-coding	0.120000	0.711443			
ePOU_nocontrol_ChIP_peaks_unique-597	chr11	105363081	105363281	+	1.03671	NA	intron (NM_172568, intron 11 of 11)	CpG	70535	NM_008626	17534	Mm.235616	NM_008626	ENSMUSG00000020695	Mrc2	Endo180|mKIAA0709|uPARAP	mannose receptor, C type 2	protein-coding	0.075000	0.676617			
ePOU_nocontrol_ChIP_peaks_unique-1978	chr3	107740689	107740889	+	1.03671	NA	TTS (NM_001113529)	TTS (NM_001113529)	19680	NM_001113529	12977	Mm.795	NM_007778	ENSMUSG00000014599	Csf1	C87615|Csfm|MCSF|op	colony stimulating factor 1 (macrophage)	protein-coding	0.000000	0.577114			
Oct4_nocontrol_ChIP_peaks_unique-44	chr17	7791123	7791323	+	1.03671	NA	intron (NM_001081416, intron 2 of 20)	intron (NM_001081416, intron 2 of 20)	36079	NM_001081416	68655	Mm.379161	NM_001081416	ENSMUSG00000071984	Fndc1	1110027O12Rik|1110051A18Rik|mKIAA1866	fibronectin type III domain containing 1	protein-coding	0.010000	0.447761			
ePOU_nocontrol_ChIP_peaks_unique-1028	chr14	101788905	101789105	+	1.03671	NA	intron (NM_201529, intron 1 of 30)	intron (NM_201529, intron 1 of 30)	-51618	NM_001347628	380928	Mm.218981	NM_201529	ENSMUSG00000033060	Lmo7	C78582|FBXO20|Gm914|mKIAA0858	LIM domain only 7	protein-coding	0.005000	0.348259			
merged_common-122	chr18	10610246	10610446	+	1.03671	NA	promoter-TSS (NM_001081222)	promoter-TSS (NM_001081222)	6	NM_001081222	77805	Mm.210996	NM_144542	ENSMUSG00000024293	Esco1	A930014I12Rik	establishment of sister chromatid cohesion N-acetyltransferase 1	protein-coding	0.140000	0.716418			
ePOU_nocontrol_ChIP_peaks_unique-764	chr12	108429719	108429919	+	1.03671	NA	intron (NM_001364196, intron 1 of 22)	intron (NM_001364196, intron 1 of 22)	5782	NM_001364196	68519	Mm.236645	NM_001043335	ENSMUSG00000058070	Eml1	1110008N23Rik|A930030P13Rik|AA171013|AI847476|AI853955|ELP79|EMAP|EMAP-1|EMAPL|heco	echinoderm microtubule associated protein like 1	protein-coding	0.005000	0.338308			
ePOU_nocontrol_ChIP_peaks_unique-2954	chr9	115665354	115665554	+	1.03671	NA	Intergenic	Intergenic	-244001	NM_028638	73748	Mm.485018	NM_028638	ENSMUSG00000056880	Gadl1	1110027M19Rik|ADC|CSADC	glutamate decarboxylase-like 1	protein-coding	0.005000	0.343284			
ePOU_nocontrol_ChIP_peaks_unique-540	chr11	81810905	81811105	+	1.03671	NA	intron (NM_001034013, intron 1 of 9)	RMER15|LTR|ERVL	-49672	NR_038010	71388	Mm.158687	NR_038010	ENSMUSG00000020703	5530401A14Rik	-	RIKEN cDNA 5530401A14 gene	ncRNA	0.000000	0.388060			
ePOU_nocontrol_ChIP_peaks_unique-2336	chr5	123138157	123138357	+	1.03671	NA	Intergenic	Intergenic	-3936	NM_001040398	208043	Mm.250391	NM_177581	ENSMUSG00000038384	Setd1b	AA516740|BC035291|KMT2G|mKIAA1076	SET domain containing 1B	protein-coding	0.020000	0.601990			
ePOU_nocontrol_ChIP_peaks_unique-1768	chr2	127774915	127775115	+	1.03671	NA	intron (NM_001355429, intron 4 of 19)	L1MEf|LINE|L1	13876	NM_001291012	53885	Mm.210766	NM_016902	ENSMUSG00000027378	Nphp1	-	nephronophthisis 1 (juvenile) homolog (human)	protein-coding	0.000000	0.288557			
ePOU_nocontrol_ChIP_peaks_unique-2361	chr5	138620893	138621093	+	1.03671	NA	Intergenic	Intergenic	-1250	NM_001044747	24135	Mm.27575	NM_013844	ENSMUSG00000058291	Zfp68	KRAB3|KRAZ2|Zfp70|mszf22|mszf49	zinc finger protein 68	protein-coding	0.020000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-1085	chr15	36282755	36282955	+	1.03671	NA	intron (NM_001357631, intron 1 of 7)	CpG	292	NM_013923	30945	Mm.5181	NM_013923	ENSMUSG00000022280	Rnf19a	AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp	ring finger protein 19A	protein-coding	0.145000	0.800995			
ePOU_nocontrol_ChIP_peaks_unique-39	chr1	36709651	36709851	+	1.03671	NA	intron (NM_146107, intron 1 of 10)	CpG	174	NM_146107	226977	Mm.28521	NM_146107	ENSMUSG00000037351	Actr1b	2310066K23Rik|AA960180|AI851923|Arp1b	ARP1 actin-related protein 1B, centractin beta	protein-coding	0.090000	0.696517			
ePOU_nocontrol_ChIP_peaks_unique-1208	chr16	27353639	27353839	+	1.03671	NA	intron (NM_198166, intron 4 of 4)	intron (NM_198166, intron 4 of 4)	16500	NM_198166	224065	Mm.326918	NM_198166	ENSMUSG00000056423	Uts2b	Gm538|U2B|Urp|Uts2d	urotensin 2B	protein-coding	0.000000	0.258706		40(CTTGCATTTGCATA,+,0.00)	45(ATTTGCATAAAACAGT,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1109	chr15	55240098	55240298	+	1.03671	NA	intron (NM_001037937, intron 8 of 8)	intron (NM_001037937, intron 8 of 8)	-67553	NM_181277	12818	Mm.297859	NM_181277	ENSMUSG00000022371	Col14a1	5730412L22Rik|AW108078	collagen, type XIV, alpha 1	protein-coding	0.000000	0.278607			53(ATTTACATGAAAATGG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-503	chr11	64978793	64978993	+	1.03671	NA	promoter-TSS (NM_023479)	promoter-TSS (NM_023479)	-142	NM_001362984	68626	Mm.157711	NM_023479	ENSMUSG00000020549	Elac2	1110017O07Rik|D11Wsu80e|Hpc2	elaC ribonuclease Z 2	protein-coding	0.085000	0.572139			
ePOU_nocontrol_ChIP_peaks_unique-134	chr1	127774048	127774248	+	1.03671	NA	promoter-TSS (NM_028399)	promoter-TSS (NM_028399)	-16	NM_028399	72949	Mm.268672	NM_028399	ENSMUSG00000026349	Ccnt2	2900041I18Rik|C81304|CycT2|CycT2a|CycT2b	cyclin T2	protein-coding	0.120000	0.746269			
ePOU_nocontrol_ChIP_peaks_unique-20	chr1	21760939	21761139	+	1.03671	NA	intron (NM_001160139, intron 1 of 14)	intron (NM_001160139, intron 1 of 14)	200903	NM_023872	226922	Mm.336519	NM_023872	ENSMUSG00000028033	Kcnq5	7730402H11|9230107O05Rik|AA589396|D1Mgi1	potassium voltage-gated channel, subfamily Q, member 5	protein-coding	0.005000	0.368159			40(ATTAGAATAAGAATTC,-,0.00)
merged_common-121	chr17	87446924	87447124	+	1.03671	NA	promoter-TSS (NM_007589)	promoter-TSS (NM_007589)	-89	NM_001355703	12314	Mm.329243	NM_007589	ENSMUSG00000036438	Calm2	1500001E21Rik|AL024017|Cam2|CamC	calmodulin 2	protein-coding	0.070000	0.656716			
ePOU_nocontrol_ChIP_peaks_unique-1091	chr15	39006085	39006285	+	1.03671	NA	promoter-TSS (NM_001162494)	promoter-TSS (NM_001162494)	-95	NM_001162494	14368	Mm.4769	NM_008056	ENSMUSG00000022297	Fzd6	Fz6	frizzled class receptor 6	protein-coding	0.130000	0.766169			
ePOU_nocontrol_ChIP_peaks_unique-2952	chr9	114752889	114753089	+	1.03671	NA	Intergenic	CpG	21786	NM_026036	67213	Mm.28858	NM_026036	ENSMUSG00000032434	Cmtm6	2810051A14Rik|AA536733|Cklfsf6	CKLF-like MARVEL transmembrane domain containing 6	protein-coding	0.065000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-1237	chr16	39979191	39979391	+	1.03671	NA	Intergenic	Intergenic	-5073	NM_001361282	268890	Mm.310524	NM_175548	ENSMUSG00000061080	Lsamp	5430428I19|AW046674|B130007O04Rik|D930023J12Rik|Gm29907|Lam|Lamp	limbic system-associated membrane protein	protein-coding	0.005000	0.353234			-57(ATTTGCATCCTAATGG,-,0.00),-6(CTTTTCAGTTGCAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2878	chr9	56042053	56042253	+	1.03671	NA	exon (NM_001278274, exon 1 of 2)	exon (NM_001278274, exon 1 of 2)	308	NM_001278274	26611	Mm.1782	NM_011992	ENSMUSG00000032320	Rcn2	AA408742|Tcbp49	reticulocalbin 2	protein-coding	0.100000	0.696517			
merged_common-148	chr2	125824287	125824487	+	1.03671	NA	Intergenic	Intergenic	34695	NM_009939	12848	Mm.3596	NM_009939	ENSMUSG00000027206	Cops2	AI315723|C85265|Csn2|Sgn2|TRIP-15|Trip15	COP9 signalosome subunit 2	protein-coding	0.010000	0.378109			
ePOU_nocontrol_ChIP_peaks_unique-1579	chr19	40513752	40513952	+	1.03671	NA	promoter-TSS (NM_178362)	promoter-TSS (NM_178362)	-40	NM_009166	20411	Mm.210815	NM_009166	ENSMUSG00000025006	Sorbs1	2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296	sorbin and SH3 domain containing 1	protein-coding	0.095000	0.726368			
ePOU_nocontrol_ChIP_peaks_unique-1264	chr16	67611196	67611396	+	1.03671	NA	intron (NM_178721, intron 1 of 9)	intron (NM_178721, intron 1 of 9)	9612	NM_001145977	239857	Mm.394300	NM_178721	ENSMUSG00000064115	Cadm2	2900078E11Rik|9330131D06|A830029E02Rik|Igdf4d|Igsf4d|NECL3|SynCAM 2|SynCAM2	cell adhesion molecule 2	protein-coding	0.010000	0.383085			
merged_common-68	chr12	110687964	110688164	+	1.03671	NA	Intergenic	Intergenic	-5445	NM_025488	66323	Mm.273316	NM_025488	ENSMUSG00000056508	1700001K19Rik	-	RIKEN cDNA 1700001K19 gene	protein-coding	0.005000	0.452736			
ePOU_nocontrol_ChIP_peaks_unique-2206	chr5	23413173	23413373	+	1.03671	NA	Intergenic	Intergenic	21080	NR_040469	269630	Mm.425231	NR_040469	ENSMUSG00000073147	5031425E22Rik	-	RIKEN cDNA 5031425E22 gene	ncRNA	0.010000	0.442786			
ePOU_nocontrol_ChIP_peaks_unique-1658	chr2	33180338	33180538	+	1.03671	NA	intron (NM_175211, intron 8 of 19)	MLT1K|LTR|ERVL-MaLR	-35523	NM_011923	26360	Mm.208919	NM_011923	ENSMUSG00000004105	Angptl2	AI593246|AW260363|Arp2	angiopoietin-like 2	protein-coding	0.020000	0.507463			
ePOU_nocontrol_ChIP_peaks_unique-697	chr12	65501448	65501648	+	1.03671	NA	Intergenic	Intergenic	276031	NM_027614	70948	Mm.219475	NM_027614	ENSMUSG00000035560	Wdr20rt	4921538B03Rik|4930427E19Rik|Wdr20|Wdr20b	WD repeat domain 20, retrogene	protein-coding	0.000000	0.373134			-54(GGATTGTCATGGAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1262	chr16	64833901	64834101	+	1.03671	NA	intron (NM_001347245, intron 1 of 8)	intron (NM_001347245, intron 1 of 8)	17722	NM_001347245	72020	Mm.25960	NM_028059	ENSMUSG00000047141	Zfp654	1600021C16Rik|1810008K20Rik|433036|Gm5488|Znf654	zinc finger protein 654	protein-coding	0.005000	0.278607			-89(ATTTTGTATTTTAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1731	chr2	102138453	102138653	+	1.03671	NA	intron (NM_178886, intron 1 of 5)	intron (NM_178886, intron 1 of 5)	47907	NM_001290784	241576	Mm.489740	NM_178886	ENSMUSG00000048058	Ldlrad3	6430500P08|AI194318|Lrad3	low density lipoprotein receptor class A domain containing 3	protein-coding	0.000000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-2123	chr4	97258789	97258989	+	1.03671	NA	Intergenic	Intergenic	-323054	NM_001122952	18027	Mm.31274	NM_010905	ENSMUSG00000028565	Nfia	1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A	nuclear factor I/A	protein-coding	0.000000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-2544	chr6	148946429	148946629	+	1.03671	NA	promoter-TSS (NM_001361398)	promoter-TSS (NM_001361398)	-59	NM_019643	56306	Mm.18637	NM_019643	ENSMUSG00000039985	Sinhcaf	Fam60a|Ppcs1|Pptcs1|Tera	SIN3-HDAC complex associated factor	protein-coding	0.160000	0.716418			
ePOU_nocontrol_ChIP_peaks_unique-995	chr14	67676442	67676642	+	1.03671	NA	3' UTR (NM_175384, exon 15 of 15)	3' UTR (NM_175384, exon 15 of 15)	39068	NM_001110162	108912	Mm.33831	NM_175384	ENSMUSG00000048922	Cdca2	2610311M19Rik|AI586158	cell division cycle associated 2	protein-coding	0.000000	0.363184			-84(ATTAGCAAAGGAAAAC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-835	chr13	52628698	52628898	+	1.03671	NA	intron (NM_001198977, intron 7 of 13)	intron (NM_001198977, intron 7 of 13)	31916	NM_011518	20963	Mm.375031	NM_011518	ENSMUSG00000021457	Syk	Sykb	spleen tyrosine kinase	protein-coding	0.015000	0.502488			
ePOU_nocontrol_ChIP_peaks_unique-318	chr10	55337336	55337536	+	1.03671	NA	Intergenic	MLTR25A|LTR|ERVK	-769481	NM_001163833	73390	Mm.181475	NM_133751	ENSMUSG00000047669	Msl3l2	1700060H10Rik	MSL3 like 2	protein-coding	0.000000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-1900	chr3	57604625	57604825	+	1.03671	NA	Intergenic	Intergenic	-11884	NR_105797	102465197		NR_105797	ENSMUSG00000098401	Mir6377	Gm27416|mmu-mir-6377	microRNA 6377	ncRNA	0.005000	0.437811			
ePOU_nocontrol_ChIP_peaks_unique-2176	chr4	145450160	145450360	+	1.03671	NA	Intergenic	MMSAT4|Satellite|Satellite	-13950	NR_002888	545700	Mm.389595	NR_002888	ENSMUSG00000052912	Smarca5-ps	9230115A19Rik	SWI/SNF related, matrix associated, actin depenent ragulator of chromatin, subfamily a, member 5, pseudogene	pseudo	0.005000	0.323383	-86(AATTAATAATGGATA,+,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2588	chr7	49778287	49778487	+	1.03671	NA	promoter-TSS (NM_133740)	promoter-TSS (NM_133740)	29	NM_133740	71974	Mm.33202	NM_133740	ENSMUSG00000030505	Prmt3	2010005E20Rik|2410018A17Rik|AL033309|Hrmt1l3	protein arginine N-methyltransferase 3	protein-coding	0.175000	0.751244			
ePOU_nocontrol_ChIP_peaks_unique-2030	chr3	151697905	151698105	+	1.03671	NA	Intergenic	Intergenic	51905	NM_133871	99899	Mm.30756	NM_133871	ENSMUSG00000028037	Ifi44	A430056A10Rik|AW261460|MTAP44|p44	interferon-induced protein 44	protein-coding	0.010000	0.467662			
ePOU_nocontrol_ChIP_peaks_unique-575	chr11	97117395	97117595	+	1.03671	NA	Intergenic	Intergenic	-2164	NM_019507	57765	Mm.94519	NM_019507	ENSMUSG00000001444	Tbx21	TBT1|Tbet|Tblym	T-box 21	protein-coding	0.010000	0.422886			-97(TTTTGCATGTCAAATA,-,0.00),-74(ATTTACATCTTAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2006	chr3	130060729	130060929	+	1.03671	NA	promoter-TSS (NM_207209)	promoter-TSS (NM_207209)	78	NM_207209	99683	Mm.192303	NM_207209	ENSMUSG00000001052	Sec24b	AI605202|SEC24	Sec24 related gene family, member B (S. cerevisiae)	protein-coding	0.145000	0.771144			
ePOU_nocontrol_ChIP_peaks_unique-1782	chr2	131283821	131284021	+	1.03671	NA	TTS (NM_001355679)	TTS (NM_001355679)	-4131	NR_029755	723825		NR_029755	ENSMUSG00000065563	Mir103-2	Mirn103-2|mir-103-2	microRNA 103-2	ncRNA	0.005000	0.417910			-53(TTTTTCCCATACAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1723	chr2	90739190	90739390	+	1.03671	NA	Intergenic	Intergenic	-6268	NM_018828	55935	Mm.489638	NM_018828	ENSMUSG00000008200	Fnbp4	FBP30|Fnbp30|mKIAA1014	formin binding protein 4	protein-coding	0.005000	0.358209		9(AATGAATATGGATG,+,0.00),9(AATGAATATGGATG,-,0.00)	31(ATTTAAATAGCAAAAA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2836	chr9	14963715	14963915	+	1.03671	NA	Intergenic	LTR37A|LTR|ERV1	-59864	NM_176807	64931	Mm.86738	NM_022888	ENSMUSG00000031933	Izumo1r	0910001L11Rik|C86255|Folbp3|Folr4|Juno	IZUMO1 receptor, JUNO	protein-coding	0.000000	0.333333			
ePOU_nocontrol_ChIP_peaks_unique-434	chr11	20996077	20996277	+	1.03671	NA	Intergenic	L1M2|LINE|L1	-95147	NM_023324	67245	Mm.28957	NM_023324	ENSMUSG00000020134	Peli1	2810468L03Rik|A930031K15Rik|AA409794|AI586297|D11Ertd676e	pellino 1	protein-coding	0.000000	0.333333			-71(CTTTTGTCATGGAAAG,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2764	chr8	78719898	78720098	+	1.03671	NA	intron (NM_029736, intron 10 of 11)	intron (NM_029736, intron 10 of 11)	101154	NM_030145	78651	Mm.28694	NM_030145	ENSMUSG00000031683	Lsm6	1500031N17Rik|2410088K19Rik|AI747288	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated	protein-coding	0.015000	0.462687			39(ATTTACATAAAACATC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-47	chr1	43551965	43552165	+	1.03671	NA	intron (NM_010879, intron 3 of 4)	intron (NM_010879, intron 3 of 4)	106314	NM_010879	17974	Mm.389903	NM_010879	ENSMUSG00000066877	Nck2	4833426I10Rik|Grb4|NCKbeta|Nck-2	non-catalytic region of tyrosine kinase adaptor protein 2	protein-coding	0.005000	0.412935			
ePOU_nocontrol_ChIP_peaks_unique-2853	chr9	31230018	31230218	+	1.03671	NA	Intergenic	Intergenic	-18270	NM_009691	11804	Mm.19133	NM_009691	ENSMUSG00000031996	Aplp2	AI790698|APLP-2|CDEBP	amyloid beta (A4) precursor-like protein 2	protein-coding	0.020000	0.383085			
ePOU_nocontrol_ChIP_peaks_unique-2364	chr5	139775533	139775733	+	1.03671	NA	promoter-TSS (NM_026748)	promoter-TSS (NM_026748)	45	NM_026748	68510	Mm.292942	NM_026748	ENSMUSG00000029547	Ints1	1110015K06Rik	integrator complex subunit 1	protein-coding	0.090000	0.621891			
ePOU_nocontrol_ChIP_peaks_unique-2087	chr4	53829806	53830006	+	1.03671	NA	intron (NM_028053, intron 1 of 5)	intron (NM_028053, intron 1 of 5)	3861	NM_028053	52076	Mm.27184	NM_028053	ENSMUSG00000028420	Tmem38b	1600017F22Rik|AA437809|AV051057|D4Ertd89e|TRIC-B|mg33b	transmembrane protein 38B	protein-coding	0.000000	0.323383			
ePOU_nocontrol_ChIP_peaks_unique-869	chr13	88144716	88144916	+	1.03671	NA	Intergenic	Intergenic	-676656	NM_001037987	13612	Mm.125580	NM_010103	ENSMUSG00000034488	Edil3	Del-1|Del1|Sox2-cre|Sox2Cre|Tg(Sox2-cre)1Amc	EGF-like repeats and discoidin I-like domains 3	protein-coding	0.000000	0.353234		-99(TATGCAAATTGATG,-,0.00)	
ePOU_nocontrol_ChIP_peaks_unique-2591	chr7	59224530	59224730	+	1.03671	NA	Intergenic	L1_Rod|LINE|L1	-4120	NM_011668	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a	ubiquitin protein ligase E3A	protein-coding	0.000000	0.298507			-58(CATTTCTCATAGAAAT,+,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1742	chr2	109917502	109917702	+	1.03671	NA	promoter-TSS (NM_172671)	promoter-TSS (NM_172671)	-45	NM_172671	107515	Mm.277351	NM_172671	ENSMUSG00000050199	Lgr4	9130225G07|A330106J01Rik|A930009A08Rik|Gpr48	leucine-rich repeat-containing G protein-coupled receptor 4	protein-coding	0.085000	0.606965			
ePOU_nocontrol_ChIP_peaks_unique-1487	chr18	68598743	68598943	+	1.03671	NA	Intergenic	Intergenic	-140557	NR_105774	102465183		NR_105774	ENSMUSG00000099300	Mir6356	Gm27461|mmu-mir-6356	microRNA 6356	ncRNA	0.005000	0.333333			-23(TCATTTGCATGCAAAG,+,0.00),-21(ATTTGCATGCAAAGAG,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2767	chr8	83089532	83089732	+	1.03671	NA	3' UTR (NM_177378, exon 7 of 7)	3' UTR (NM_177378, exon 7 of 7)	-75720	NM_027758	71310	Mm.24031	NM_027758	ENSMUSG00000031709	Tbc1d9	4933431N12Rik|AI847101|AW490653|C76116	TBC1 domain family, member 9	protein-coding	0.015000	0.422886			
ePOU_nocontrol_ChIP_peaks_unique-2415	chr6	34598343	34598543	+	1.03671	NA	promoter-TSS (NM_001347100)	promoter-TSS (NM_001347100)	-61	NM_001347100	109624	Mm.308134	NM_145575	ENSMUSG00000029761	Cald1	4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik	caldesmon 1	protein-coding	0.020000	0.512438			
ePOU_nocontrol_ChIP_peaks_unique-1788	chr2	135210111	135210311	+	1.03671	NA	intron (NR_040517, intron 2 of 5)	intron (NR_040517, intron 2 of 5)	5405	NR_040517	78805	Mm.78702	NR_040517	ENSMUSG00000085247	4930545L23Rik	-	RIKEN cDNA 4930545L23 gene	ncRNA	0.005000	0.333333			
merged_common-16	chr1	182103567	182103767	+	1.03671	NA	Intergenic	Intergenic	-21070	NM_012058	27058	Mm.273196	NM_012058	ENSMUSG00000026511	Srp9	9kDa	signal recognition particle 9	protein-coding	0.035000	0.542289	4(GGTGAATTATTCATG,+,0.00),4(GGTGAATTATTCATG,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-623	chr11	118355161	118355361	+	1.03671	NA	5' UTR (NM_011594, exon 1 of 5)	5' UTR (NM_011594, exon 1 of 5)	150	NM_011594	21858	Mm.206505	NM_011594	ENSMUSG00000017466	Timp2	D11Bwg1104e|Timp-2	tissue inhibitor of metalloproteinase 2	protein-coding	0.115000	0.701493			
ePOU_nocontrol_ChIP_peaks_unique-384	chr10	106075908	106076108	+	1.03671	NA	Intergenic	Intergenic	234529	NM_025602	52713	Mm.339224	NM_025602	ENSMUSG00000019897	Ccdc59	2300004H16Rik|D10Ertd718e	coiled-coil domain containing 59	protein-coding	0.000000	0.298507	-18(TATGCATAATTCTTT,+,0.00),-18(TATGCATAATTCTTT,-,0.00),42(AATGAATATTTCATA,+,0.00),42(AATGAATATTTCATA,-,0.00)		
ePOU_nocontrol_ChIP_peaks_unique-2168	chr4	136310991	136311191	+	1.03671	NA	promoter-TSS (NM_001355182)	promoter-TSS (NM_001355182)	149	NM_028871	74326	Mm.31051	NM_028871	ENSMUSG00000066037	Hnrnpr	2610003J05Rik|2610528B01Rik|Hnrpr	heterogeneous nuclear ribonucleoprotein R	protein-coding	0.100000	0.726368			
merged_common-223	chr7	129591721	129591921	+	1.03671	NA	promoter-TSS (NM_172255)	promoter-TSS (NM_172255)	-42	NM_172255	207425	Mm.229323	NM_172255	ENSMUSG00000042055	Wdr11	2900055P10Rik|AW489876|Brwd2|mKIAA1351	WD repeat domain 11	protein-coding	0.055000	0.552239			
ePOU_nocontrol_ChIP_peaks_unique-2568	chr7	34268846	34269046	+	1.03671	NA	intron (NM_172741, intron 1 of 12)	intron (NM_172741, intron 1 of 12)	16663	NM_172741	233103	Mm.491097	NM_172741	ENSMUSG00000066571	4931406P16Rik	AA553327|mKIAA0355	RIKEN cDNA 4931406P16 gene	protein-coding	0.005000	0.393035			51(ATTAACAAAAAAAATC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-1116	chr15	59382788	59382988	+	1.03671	NA	intron (NM_001164604, intron 2 of 4)	intron (NM_001164604, intron 2 of 4)	8690	NM_026746	68501	Mm.27762	NM_026746	ENSMUSG00000059586	Nsmce2	1110014D18Rik|AI661537	NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase	protein-coding	0.005000	0.363184			-48(GTTTGCATCACCATAC,-,0.00),-15(ATTTGAAAAGAAATGC,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-855	chr13	76384190	76384390	+	1.03671	NA	promoter-TSS (NM_030174)	promoter-TSS (NM_030174)	-671	NM_030174	78771	Mm.316249	NM_030174	ENSMUSG00000021596	Mctp1	2810465F10Rik	multiple C2 domains, transmembrane 1	protein-coding	0.105000	0.721393			
ePOU_nocontrol_ChIP_peaks_unique-1552	chr19	21726460	21726660	+	1.03671	NA	Intergenic	RCHARR1|DNA|hAT-Charlie	-51780	NM_001033759	83921	Mm.329776	NM_031997	ENSMUSG00000024754	Cemip2	Tmem2	cell migration inducing hyaluronidase 2	protein-coding	0.005000	0.283582			-71(TCATTAGCATACAAAT,+,0.00),-25(ATATGCATAACAAAGA,-,0.00)
ePOU_nocontrol_ChIP_peaks_unique-2552	chr7	16738343	16738543	+	1.03671	NA	promoter-TSS (NM_198613)	promoter-TSS (NM_198613)	-1	NM_198613	232910	Mm.333597	NM_198613	ENSMUSG00000008036	Ap2s1	AI043088	adaptor-related protein complex 2, sigma 1 subunit	protein-coding	0.070000	0.646766			
ePOU_nocontrol_ChIP_peaks_unique-4	chr1	9520266	9520466	+	1.03198	NA	Intergenic	RLTR13B1|LTR|ERVK	-25042	NM_021511	59014	Mm.29061	NM_021511	ENSMUSG00000061024	Rrs1	5730466A07Rik|AA415037|D1Ertd701e|Rrr	ribosome biogenesis regulator 1	protein-coding	0.000000	0.368159	77(ATTGCATTATTCATG,+,0.00),77(ATTGCATTATTCATG,-,0.00)		
merged_common-90	chr14	65465081	65465281	+	1.01628	NA	Intergenic	Intergenic	-39709	NM_010932	18155	Mm.16347	NM_010932	ENSMUSG00000045731	Pnoc	N/OFQ|Npnc1|OFQ/N	prepronociceptin	protein-coding	0.015000	0.412935			-74(ATCTGCAAAACAACTC,-,0.00)
merged_common-22	chr10	58358297	58358497	+	1.00023	NA	intron (NM_001359116, intron 1 of 9)	B3|SINE|B2	6434	NM_001359116	110829	Mm.57734	NM_026148	ENSMUSG00000019920	Lims1	2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1	LIM and senescent cell antigen-like domains 1	protein-coding	0.020000	0.462687